Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058631.t1 | XP_013457255.1 | 79.1 | 704 | 35 | 4 | 1 | 607 | 102 | 790 | 3.50E-302 | 1047 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058631.t1 | Q641I1 | 39.3 | 272 | 132 | 7 | 327 | 594 | 1120 | 1362 | 1.1e-43 | 179.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058631.t1 | A0A072UPJ0 | 79.1 | 704 | 35 | 4 | 1 | 607 | 102 | 790 | 2.5e-302 | 1047.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052609 | MS.gene058631 | 0.821621 | 3.66E-53 | -1.69E-46 |
| MS.gene058631 | MS.gene065593 | 0.802678 | 5.01E-49 | -1.69E-46 |
| MS.gene058631 | MS.gene51029 | 0.810605 | 1.06E-50 | -1.69E-46 |
| MS.gene058631 | MS.gene54280 | 0.822143 | 2.77E-53 | -1.69E-46 |
| MS.gene058631 | MS.gene86267 | 0.803483 | 3.41E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058631.t1 | MTR_1g007420 | 48.319 | 714 | 230 | 17 | 2 | 607 | 204 | 886 | 0.0 | 603 |
| MS.gene058631.t1 | MTR_4g094378 | 84.444 | 360 | 36 | 3 | 1 | 344 | 102 | 457 | 0.0 | 602 |
| MS.gene058631.t1 | MTR_4g094378 | 83.333 | 318 | 35 | 4 | 291 | 607 | 490 | 790 | 3.21e-180 | 530 |
| MS.gene058631.t1 | MTR_3g110690 | 46.273 | 711 | 256 | 16 | 2 | 607 | 68 | 757 | 0.0 | 566 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058631.t1 | AT1G58350 | 51.482 | 641 | 246 | 12 | 2 | 607 | 101 | 711 | 0.0 | 605 |
| MS.gene058631.t1 | AT1G58350 | 45.694 | 720 | 251 | 16 | 2 | 607 | 101 | 794 | 0.0 | 556 |
| MS.gene058631.t1 | AT1G58350 | 45.694 | 720 | 251 | 16 | 2 | 607 | 101 | 794 | 0.0 | 556 |
| MS.gene058631.t1 | AT1G58350 | 45.694 | 720 | 251 | 16 | 2 | 607 | 101 | 794 | 0.0 | 556 |
| MS.gene058631.t1 | AT1G09980 | 66.323 | 291 | 79 | 2 | 322 | 607 | 525 | 801 | 3.16e-131 | 404 |
| MS.gene058631.t1 | AT1G09980 | 37.568 | 370 | 195 | 10 | 2 | 344 | 101 | 461 | 4.57e-61 | 217 |
| MS.gene058631.t1 | AT1G09980 | 66.323 | 291 | 79 | 2 | 322 | 607 | 526 | 802 | 3.28e-131 | 404 |
| MS.gene058631.t1 | AT1G09980 | 37.568 | 370 | 196 | 9 | 2 | 344 | 101 | 462 | 1.24e-62 | 221 |
| MS.gene058631.t1 | AT1G09980 | 66.323 | 291 | 79 | 2 | 322 | 607 | 526 | 802 | 3.28e-131 | 404 |
| MS.gene058631.t1 | AT1G09980 | 37.568 | 370 | 196 | 9 | 2 | 344 | 101 | 462 | 1.24e-62 | 221 |
Find 122 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGAATTCTCTATTCAATTC+AGG | 0.191230 | 4.2:-18444101 | MS.gene058631:CDS |
| CCAGCGTCTTCTCCTGTATT+TGG | 0.200378 | 4.2:+18443595 | None:intergenic |
| AGGGAAATCATTTGGATTTA+CGG | 0.261407 | 4.2:-18444545 | MS.gene058631:CDS |
| AAGTGATCTCTTTCCTAAAA+AGG | 0.278922 | 4.2:-18444407 | MS.gene058631:CDS |
| CTCTATTCAATTCAGGGCTT+TGG | 0.283617 | 4.2:-18444094 | MS.gene058631:CDS |
| ATCTCATTCTACCTAGCTTT+TGG | 0.288740 | 4.2:-18448080 | MS.gene058631:CDS |
| TGTAATCCCAGAAGAGCTTT+AGG | 0.305888 | 4.2:+18447556 | None:intergenic |
| AGCAGCTCATATAGAGTTCT+TGG | 0.309109 | 4.2:-18442850 | MS.gene058631:CDS |
| TAAAATTCAGGGAAATCATT+TGG | 0.309549 | 4.2:-18444553 | MS.gene058631:intron |
| TTGAATCAGATGATACAAAA+TGG | 0.314689 | 4.2:-18446570 | MS.gene058631:CDS |
| CTTTGTTATCTAAACATCTC+TGG | 0.315177 | 4.2:+18442789 | None:intergenic |
| GTATACCTATGTGTCGATAT+CGG | 0.316268 | 4.2:-18444150 | MS.gene058631:CDS |
| TTGAATTTCTGCGCAAATCC+TGG | 0.325382 | 4.2:-18445917 | MS.gene058631:CDS |
| AATCACCTCAGCTGCCTGAT+AGG | 0.328592 | 4.2:-18446501 | MS.gene058631:CDS |
| CGCATTATTGCAGTTTGAAT+AGG | 0.328610 | 4.2:+18445631 | None:intergenic |
| CATGCTCCTATGACTGCTAC+TGG | 0.333893 | 4.2:-18447783 | MS.gene058631:CDS |
| AGATGATCATCCCAAGAAAA+AGG | 0.335417 | 4.2:+18446320 | None:intergenic |
| CATCCATCAACTGACCTTTA+CGG | 0.338542 | 4.2:-18444042 | MS.gene058631:CDS |
| TAACAATGAGACTAATAAAA+TGG | 0.348268 | 4.2:+18443621 | None:intergenic |
| CCTGCCTTGCATATCTAATC+TGG | 0.357865 | 4.2:+18448123 | None:intergenic |
| ATTGACTAAACATAGGGAAT+AGG | 0.358887 | 4.2:-18443644 | MS.gene058631:intron |
| ATCTGGCGACTTCAGAGAAA+TGG | 0.359053 | 4.2:-18444448 | MS.gene058631:CDS |
| GGTCAGAGGAAGTTCGGATT+TGG | 0.373363 | 4.2:+18442949 | None:intergenic |
| CTATCGGTAATCTCATTGTC+AGG | 0.387190 | 4.2:-18444320 | MS.gene058631:CDS |
| GGAGAACTGAATGGTCAATA+TGG | 0.393372 | 4.2:-18445884 | MS.gene058631:CDS |
| GTCGATATCGGGTCCACACT+TGG | 0.395614 | 4.2:-18444138 | MS.gene058631:CDS |
| ATTGTTCACCATCAATACTT+TGG | 0.404100 | 4.2:+18446521 | None:intergenic |
| GCACTGACTTCTTCCCTATC+AGG | 0.404605 | 4.2:+18446487 | None:intergenic |
| CGAATCAGCTCTTATATCTC+TGG | 0.407257 | 4.2:-18446274 | MS.gene058631:CDS |
| GACATTAGAAACTGTATCTC+GGG | 0.408136 | 4.2:+18444492 | None:intergenic |
| CGCGATGGTCAGAGGAAGTT+CGG | 0.414981 | 4.2:+18442943 | None:intergenic |
| CGAATTCTCTATTCAATTCA+GGG | 0.417165 | 4.2:-18444100 | MS.gene058631:CDS |
| GTAATCCCAGAAGAGCTTTA+GGG | 0.418437 | 4.2:+18447557 | None:intergenic |
| ACTGTGCCCAGCAGCTTCTT+CGG | 0.435625 | 4.2:-18443024 | MS.gene058631:CDS |
| AACTTCAACGCTTCTTCCTA+CGG | 0.438744 | 4.2:-18442900 | MS.gene058631:CDS |
| GTATACAAGTATCTTAGATA+TGG | 0.439686 | 4.2:+18444167 | None:intergenic |
| TTTGTTATCTAAACATCTCT+GGG | 0.444284 | 4.2:+18442790 | None:intergenic |
| TAATGCGTGCAGAACTTCAT+AGG | 0.447317 | 4.2:-18445615 | MS.gene058631:CDS |
| GCACGTGTCCAAAGTATTGA+TGG | 0.455150 | 4.2:-18446529 | MS.gene058631:CDS |
| TATACCTATGTGTCGATATC+GGG | 0.465136 | 4.2:-18444149 | MS.gene058631:CDS |
| ATTGTCAGGGCAGCCTTAGC+AGG | 0.466145 | 4.2:-18444306 | MS.gene058631:intron |
| GCAAATGAAGAGAAAACATC+TGG | 0.466183 | 4.2:-18444465 | MS.gene058631:CDS |
| TCATTGTTATTACCAAATAC+AGG | 0.467443 | 4.2:-18443607 | MS.gene058631:CDS |
| ATGAAAGTATTCTCAAGATC+AGG | 0.468624 | 4.2:+18444014 | None:intergenic |
| TTGGCTATTGAAGAAGTTCA+AGG | 0.476659 | 4.2:-18444075 | MS.gene058631:CDS |
| AATGTATTTCTGAAATTCAC+AGG | 0.476732 | 4.2:-18446251 | MS.gene058631:CDS |
| TGATGCTTTCCATGCTGTCA+TGG | 0.479987 | 4.2:-18447511 | MS.gene058631:CDS |
| ACTAACCCAGTAGCAGTCAT+AGG | 0.488470 | 4.2:+18447777 | None:intergenic |
| AGTTTGGATGATTGATGATA+CGG | 0.489447 | 4.2:-18448171 | None:intergenic |
| CATCCGTAAAGGTCAGTTGA+TGG | 0.496688 | 4.2:+18444039 | None:intergenic |
| TTTCAGTCAAATCAATAGCT+TGG | 0.497020 | 4.2:+18446599 | None:intergenic |
| TGAATTTCTGCGCAAATCCT+GGG | 0.498276 | 4.2:-18445916 | MS.gene058631:CDS |
| CTCATAAATAATACCTGCTA+AGG | 0.499861 | 4.2:+18444293 | None:intergenic |
| AGCTTCGTTGGTCATTCTAT+CGG | 0.501317 | 4.2:-18444336 | MS.gene058631:CDS |
| TCTGGCGACTTCAGAGAAAT+GGG | 0.501567 | 4.2:-18444447 | MS.gene058631:CDS |
| AGGAACTTAAACACACTTAT+CGG | 0.501670 | 4.2:-18442876 | MS.gene058631:CDS |
| CGGGGTCTATTAAAAGCCAT+TGG | 0.503415 | 4.2:+18444511 | None:intergenic |
| GATATCAAGCTCAGCTTCGT+TGG | 0.503921 | 4.2:-18444348 | MS.gene058631:CDS |
| ATCACCTCAGCTGCCTGATA+GGG | 0.508140 | 4.2:-18446500 | MS.gene058631:CDS |
| AATTACGCTGAAGATTATGT+TGG | 0.515085 | 4.2:-18446900 | MS.gene058631:CDS |
| AATAATTCCAGAAAGCATGA+TGG | 0.516655 | 4.2:-18444192 | MS.gene058631:intron |
| TCAATACTTTGGACACGTGC+TGG | 0.518051 | 4.2:+18446532 | None:intergenic |
| ATTACGCTGAAGATTATGTT+GGG | 0.519193 | 4.2:-18446899 | MS.gene058631:CDS |
| TACGGCTTGTTCGTAACCAA+TGG | 0.520931 | 4.2:-18444527 | MS.gene058631:CDS |
| GCAAATCCTGGGCTGTTGAT+CGG | 0.521937 | 4.2:-18445905 | MS.gene058631:CDS |
| GATGCTCATCAAAGCATTGA+TGG | 0.522659 | 4.2:-18446674 | MS.gene058631:CDS |
| TCTATTCTAGCAGAATGATA+AGG | 0.527610 | 4.2:+18443047 | None:intergenic |
| CCAGATTAGATATGCAAGGC+AGG | 0.531143 | 4.2:-18448123 | MS.gene058631:CDS |
| ACAGATGCTAAATAATTGCT+TGG | 0.532785 | 4.2:-18442973 | MS.gene058631:CDS |
| TGACATTAGAAACTGTATCT+CGG | 0.536231 | 4.2:+18444491 | None:intergenic |
| CATGATTACGCGATGGTCAG+AGG | 0.538432 | 4.2:+18442935 | None:intergenic |
| GAATTGTACCAGTGACTGTA+GGG | 0.541295 | 4.2:-18446934 | MS.gene058631:intron |
| TCAACGCTTCTTCCTACGGC+AGG | 0.541831 | 4.2:-18442896 | MS.gene058631:CDS |
| TTTCATCTATAATCTTTCCA+AGG | 0.548074 | 4.2:-18443997 | MS.gene058631:intron |
| TATATGCACAACAAAGTTGA+GGG | 0.548369 | 4.2:-18445828 | MS.gene058631:CDS |
| CCTCATATTCACCAAAAGCT+AGG | 0.548403 | 4.2:+18448069 | None:intergenic |
| GGCGAGGCATATCACAAATG+AGG | 0.549481 | 4.2:-18445594 | MS.gene058631:CDS |
| CTTGCATATCTAATCTGGAA+TGG | 0.563392 | 4.2:+18448128 | None:intergenic |
| ACAGAAGTTCATTAAATACA+AGG | 0.563774 | 4.2:-18445782 | MS.gene058631:CDS |
| AAAAGGTTGAACTGATTCCT+CGG | 0.567378 | 4.2:+18446337 | None:intergenic |
| ATGAACTTCTGTGTAAGCTA+TGG | 0.570881 | 4.2:+18445793 | None:intergenic |
| TCGATATCGGGTCCACACTT+GGG | 0.574688 | 4.2:-18444137 | MS.gene058631:CDS |
| GGAAAGCATCAAAAGTGGAT+AGG | 0.580217 | 4.2:+18447523 | None:intergenic |
| GGAATTGTACCAGTGACTGT+AGG | 0.582373 | 4.2:-18446935 | MS.gene058631:intron |
| AGCATGGAAAGCATCAAAAG+TGG | 0.582766 | 4.2:+18447518 | None:intergenic |
| AGTTCTCCGATCAACAGCCC+AGG | 0.586596 | 4.2:+18445899 | None:intergenic |
| TGGCTATTGAAGAAGTTCAA+GGG | 0.589842 | 4.2:-18444074 | MS.gene058631:CDS |
| GAGAAGACGCTGGAAAACTT+CGG | 0.594075 | 4.2:-18443585 | MS.gene058631:CDS |
| AATATGGATGGTGTACTCAA+AGG | 0.598801 | 4.2:-18445868 | MS.gene058631:CDS |
| AAGATCAGGATCATCCGTAA+AGG | 0.598968 | 4.2:+18444028 | None:intergenic |
| TGTGTTTAAGTTCCTGCCGT+AGG | 0.599390 | 4.2:+18442884 | None:intergenic |
| ATATATGCACAACAAAGTTG+AGG | 0.599454 | 4.2:-18445829 | MS.gene058631:CDS |
| ATGCTCCTATGACTGCTACT+GGG | 0.599526 | 4.2:-18447782 | MS.gene058631:intron |
| GATCTGAAAAGAATAAGCAC+AGG | 0.602066 | 4.2:-18446628 | MS.gene058631:CDS |
| TTATCACACAATTCGACAGA+AGG | 0.607461 | 4.2:-18447451 | MS.gene058631:CDS |
| AACTGAATGGTCAATATGGA+TGG | 0.612659 | 4.2:-18445880 | MS.gene058631:CDS |
| AGCAATTATTTAGCATCTGT+AGG | 0.614495 | 4.2:+18442976 | None:intergenic |
| TCTTCCCTATCAGGCAGCTG+AGG | 0.617695 | 4.2:+18446496 | None:intergenic |
| GATACAGTTTCTAATGTCAG+AGG | 0.619769 | 4.2:-18444487 | MS.gene058631:CDS |
| GCGAGGCATATCACAAATGA+GGG | 0.621981 | 4.2:-18445593 | MS.gene058631:intron |
| TAATCCCAGAAGAGCTTTAG+GGG | 0.624736 | 4.2:+18447558 | None:intergenic |
| TTGTATCAACCATGACAGCA+TGG | 0.625771 | 4.2:+18447502 | None:intergenic |
| CCAAATACAGGAGAAGACGC+TGG | 0.628853 | 4.2:-18443595 | MS.gene058631:CDS |
| AGATTATGTTGGGTCAAACA+AGG | 0.639267 | 4.2:-18446889 | MS.gene058631:intron |
| TATCGGTAATCTCATTGTCA+GGG | 0.639335 | 4.2:-18444319 | MS.gene058631:CDS |
| TTGTTGTGCATATATTGATG+AGG | 0.641825 | 4.2:+18445837 | None:intergenic |
| CGTGCAGAACTTCATAGGCG+AGG | 0.643599 | 4.2:-18445610 | MS.gene058631:CDS |
| CATTCCAGATTAGATATGCA+AGG | 0.646025 | 4.2:-18448127 | MS.gene058631:CDS |
| TGGACCCGATATCGACACAT+AGG | 0.653112 | 4.2:+18444145 | None:intergenic |
| TAATATCAATTATCTAACCG+AGG | 0.655534 | 4.2:-18446354 | MS.gene058631:CDS |
| AAAGGAAGTTACCTGAGGCG+AGG | 0.656494 | 4.2:+18443547 | None:intergenic |
| ATCCCAGAAGAGCTTTAGGG+GGG | 0.659435 | 4.2:+18447560 | None:intergenic |
| AGTGACTGTAGGGATTCAGA+AGG | 0.671188 | 4.2:-18446924 | MS.gene058631:CDS |
| ATATGCACAACAAAGTTGAG+GGG | 0.678794 | 4.2:-18445827 | MS.gene058631:CDS |
| ACATTAGAAACTGTATCTCG+GGG | 0.679231 | 4.2:+18444493 | None:intergenic |
| CGCAGCGCATGATTACGCGA+TGG | 0.679459 | 4.2:+18442928 | None:intergenic |
| CAATTCGACAGAAGGTACCA+AGG | 0.680032 | 4.2:-18447443 | MS.gene058631:intron |
| AATCCCAGAAGAGCTTTAGG+GGG | 0.680337 | 4.2:+18447559 | None:intergenic |
| CTGTTGATCGGAGAACTGAA+TGG | 0.680511 | 4.2:-18445893 | MS.gene058631:CDS |
| CTGTACATATAACCCAAGTG+TGG | 0.683359 | 4.2:+18444125 | None:intergenic |
| GCATATCTAATCTGGAATGG+CGG | 0.692647 | 4.2:+18448131 | None:intergenic |
| GAAGTTCATTAAATACAAGG+AGG | 0.717680 | 4.2:-18445779 | MS.gene058631:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAACATAAATAAGTTA+TGG | + | chr4.2:18443954-18443973 | None:intergenic | 10.0% |
| !! | CAAAAATAAAAAATTAAAGT+AGG | - | chr4.2:18446716-18446735 | MS.gene058631:intron | 10.0% |
| !! | GTATAAAAATTACAATTATT+AGG | - | chr4.2:18447604-18447623 | MS.gene058631:intron | 10.0% |
| !!! | AATTTAAAATCAAATTTGAT+GGG | + | chr4.2:18443868-18443887 | None:intergenic | 10.0% |
| !!! | TTTAATTTTTTATTTTTGTG+TGG | + | chr4.2:18446714-18446733 | None:intergenic | 10.0% |
| !! | AAATAGAGTTTAATATTGAT+AGG | + | chr4.2:18447290-18447309 | None:intergenic | 15.0% |
| !! | AAATGAAACATACAAAAAAA+TGG | - | chr4.2:18443249-18443268 | MS.gene058631:intron | 15.0% |
| !! | CACAAAAAAAATATAAACAA+GGG | + | chr4.2:18445835-18445854 | None:intergenic | 15.0% |
| !! | TAAAAGAAAACTAAATTAGT+AGG | - | chr4.2:18447571-18447590 | MS.gene058631:CDS | 15.0% |
| !! | TCACAAAAAAAATATAAACA+AGG | + | chr4.2:18445836-18445855 | None:intergenic | 15.0% |
| !!! | ACATTATAATTTTTAATGCA+AGG | - | chr4.2:18444898-18444917 | MS.gene058631:intron | 15.0% |
| !!! | CAATTTAAAATCAAATTTGA+TGG | + | chr4.2:18443869-18443888 | None:intergenic | 15.0% |
| !!! | CTATATTGATAATTTTTTCT+TGG | - | chr4.2:18444856-18444875 | MS.gene058631:intron | 15.0% |
| !!! | TTTTTAATTGACTAAACATA+GGG | - | chr4.2:18447308-18447327 | MS.gene058631:intron | 15.0% |
| !!! | TTTTTTAATTGACTAAACAT+AGG | - | chr4.2:18447307-18447326 | MS.gene058631:intron | 15.0% |
| !! | AACAAAATATCATCACAATT+TGG | + | chr4.2:18443051-18443070 | None:intergenic | 20.0% |
| !! | AAGATAATGAAGATAAAATG+AGG | - | chr4.2:18443697-18443716 | MS.gene058631:intron | 20.0% |
| !! | ACAGTATATTATTTCCAAAA+AGG | + | chr4.2:18443222-18443241 | None:intergenic | 20.0% |
| !! | CAGTATATTATTTCCAAAAA+GGG | + | chr4.2:18443221-18443240 | None:intergenic | 20.0% |
| !! | CATAATTTGAAAGAAAAGAA+AGG | + | chr4.2:18446216-18446235 | None:intergenic | 20.0% |
| !! | CATATATTTAAACTCAAAAC+TGG | + | chr4.2:18443553-18443572 | None:intergenic | 20.0% |
| !! | CTTATCTATCATAAATTTCT+TGG | - | chr4.2:18443096-18443115 | MS.gene058631:intron | 20.0% |
| !! | TAAATACAATGATTGTGAAA+TGG | - | chr4.2:18443295-18443314 | MS.gene058631:intron | 20.0% |
| !! | TAACAATGAGACTAATAAAA+TGG | + | chr4.2:18447340-18447359 | None:intergenic | 20.0% |
| !! | TGAGATTGAAATAAAATGTT+GGG | - | chr4.2:18447045-18447064 | MS.gene058631:intron | 20.0% |
| !! | TTAGTGCTAAAAGTAATATT+AGG | + | chr4.2:18445873-18445892 | None:intergenic | 20.0% |
| !! | TTCAAGACATGTATATATTT+GGG | - | chr4.2:18445484-18445503 | MS.gene058631:intron | 20.0% |
| !! | TTGAGATTGAAATAAAATGT+TGG | - | chr4.2:18447044-18447063 | MS.gene058631:intron | 20.0% |
| !!! | AGAACTATTTTAAAAGAACT+TGG | - | chr4.2:18447463-18447482 | MS.gene058631:CDS | 20.0% |
| !!! | AGGGTGATATTTATATTTTT+CGG | + | chr4.2:18446058-18446077 | None:intergenic | 20.0% |
| !!! | ATAAATATCACCCTTTTTAA+TGG | - | chr4.2:18446064-18446083 | MS.gene058631:intron | 20.0% |
| !!! | ATGGCTATTTTACAATTATA+GGG | + | chr4.2:18443935-18443954 | None:intergenic | 20.0% |
| !!! | CTTTTAAAATAGTTCTTACT+AGG | + | chr4.2:18447459-18447478 | None:intergenic | 20.0% |
| !!! | TATGGCTATTTTACAATTAT+AGG | + | chr4.2:18443936-18443955 | None:intergenic | 20.0% |
| !!! | TCTTCATAATATCTTTAAAG+TGG | - | chr4.2:18443607-18443626 | MS.gene058631:CDS | 20.0% |
| !!! | TTCAAGTTTATTGGTATATT+TGG | - | chr4.2:18447101-18447120 | MS.gene058631:intron | 20.0% |
| !!! | TTTTTTTTTTTTTGTGGTGA+AGG | - | chr4.2:18444139-18444158 | MS.gene058631:CDS | 20.0% |
| ! | AAAAGAAAAAGACAGAAACA+AGG | + | chr4.2:18446318-18446337 | None:intergenic | 25.0% |
| ! | AAAATATCATCACAATTTGG+AGG | + | chr4.2:18443048-18443067 | None:intergenic | 25.0% |
| ! | AACTTGAATGTCCATTAAAA+AGG | + | chr4.2:18446078-18446097 | None:intergenic | 25.0% |
| ! | AATATTCTGCATTCAAATGT+TGG | - | chr4.2:18447506-18447525 | MS.gene058631:CDS | 25.0% |
| ! | AATGAAGTTTGAATTCAAAC+TGG | + | chr4.2:18445570-18445589 | None:intergenic | 25.0% |
| ! | ACACATTCATGAAATAAATC+AGG | + | chr4.2:18446252-18446271 | None:intergenic | 25.0% |
| ! | ACAGAAGTTCATTAAATACA+AGG | - | chr4.2:18445176-18445195 | MS.gene058631:intron | 25.0% |
| ! | ACAGTTAAAACAATATAGTG+TGG | + | chr4.2:18443986-18444005 | None:intergenic | 25.0% |
| ! | ACATGAACACATACTTATAA+AGG | + | chr4.2:18442952-18442971 | None:intergenic | 25.0% |
| ! | ACATTGACATTGAAAGAATT+AGG | + | chr4.2:18444503-18444522 | None:intergenic | 25.0% |
| ! | ACTTGAATGTCCATTAAAAA+GGG | + | chr4.2:18446077-18446096 | None:intergenic | 25.0% |
| ! | AGACATTCATTAACATTACA+CGG | + | chr4.2:18447830-18447849 | None:intergenic | 25.0% |
| ! | ATAATAATAGGAACAAGCAA+AGG | + | chr4.2:18445514-18445533 | None:intergenic | 25.0% |
| ! | ATAATTTCCACAGCATATAA+AGG | + | chr4.2:18447432-18447451 | None:intergenic | 25.0% |
| ! | ATGAACACATACTTATAAAG+GGG | + | chr4.2:18442950-18442969 | None:intergenic | 25.0% |
| ! | ATTTAGCGAAAGTTTATTGA+AGG | + | chr4.2:18446146-18446165 | None:intergenic | 25.0% |
| ! | CATGAACACATACTTATAAA+GGG | + | chr4.2:18442951-18442970 | None:intergenic | 25.0% |
| ! | CTTCAAGACATGTATATATT+TGG | - | chr4.2:18445483-18445502 | MS.gene058631:intron | 25.0% |
| ! | GAAGAAGAAACAATGATTTA+TGG | + | chr4.2:18444796-18444815 | None:intergenic | 25.0% |
| ! | GTATACAAGTATCTTAGATA+TGG | + | chr4.2:18446794-18446813 | None:intergenic | 25.0% |
| ! | TAAAATTCAGGGAAATCATT+TGG | - | chr4.2:18446405-18446424 | MS.gene058631:intron | 25.0% |
| ! | TAATATCAATTATCTAACCG+AGG | - | chr4.2:18444604-18444623 | MS.gene058631:intron | 25.0% |
| ! | TTACACTATTTGAACATTGT+AGG | + | chr4.2:18447806-18447825 | None:intergenic | 25.0% |
| ! | TTAGTCAAATCATCTATGAA+TGG | + | chr4.2:18446369-18446388 | None:intergenic | 25.0% |
| ! | TTATGAAGATATCCTAACAA+AGG | + | chr4.2:18443596-18443615 | None:intergenic | 25.0% |
| ! | TTGAATCAGATGATACAAAA+TGG | - | chr4.2:18444388-18444407 | MS.gene058631:CDS | 25.0% |
| ! | TTTAGCGAAAGTTTATTGAA+GGG | + | chr4.2:18446145-18446164 | None:intergenic | 25.0% |
| ! | TTTCATCTATAATCTTTCCA+AGG | - | chr4.2:18446961-18446980 | MS.gene058631:intron | 25.0% |
| !! | ACTTAAATCTTTTCTTCAAC+AGG | - | chr4.2:18444571-18444590 | MS.gene058631:intron | 25.0% |
| !! | ATTATCAAAGTAGAGTTGAT+TGG | + | chr4.2:18443788-18443807 | None:intergenic | 25.0% |
| !! | CTTGGTTTGAGATTTATATT+TGG | - | chr4.2:18444874-18444893 | MS.gene058631:intron | 25.0% |
| !! | CTTTATCCATTTTCCTTTTT+AGG | + | chr4.2:18446567-18446586 | None:intergenic | 25.0% |
| !! | TCAACTCTACTTTGATAATA+CGG | - | chr4.2:18443789-18443808 | MS.gene058631:intron | 25.0% |
| !! | TCATTGTTATTACCAAATAC+AGG | - | chr4.2:18447351-18447370 | MS.gene058631:intron | 25.0% |
| !! | TTCCTTCTAAAAAGTAAACA+AGG | + | chr4.2:18443011-18443030 | None:intergenic | 25.0% |
| !! | TTCTGTCTTTTTCTTTTTGA+CGG | - | chr4.2:18446321-18446340 | MS.gene058631:CDS | 25.0% |
| !! | TTTTGAACGAAAAAATCTTG+AGG | + | chr4.2:18447761-18447780 | None:intergenic | 25.0% |
| !! | TTTTTGCAAAGTTCATAATG+TGG | - | chr4.2:18448140-18448159 | MS.gene058631:CDS | 25.0% |
| !!! | AAATCAAATTTGATGGGTTT+AGG | + | chr4.2:18443862-18443881 | None:intergenic | 25.0% |
| !!! | AATGTATTTCTGAAATTCAC+AGG | - | chr4.2:18444707-18444726 | MS.gene058631:intron | 25.0% |
| !!! | AGTAGTTGTTTTTTGTTCAT+GGG | - | chr4.2:18445686-18445705 | MS.gene058631:intron | 25.0% |
| !!! | CATAATATCTTTAAAGTGGT+TGG | - | chr4.2:18443611-18443630 | MS.gene058631:CDS | 25.0% |
| !!! | GTTTTAACTGTTGAATGATA+TGG | - | chr4.2:18443995-18444014 | MS.gene058631:intron | 25.0% |
| AAGTGATCTCTTTCCTAAAA+AGG | - | chr4.2:18446551-18446570 | MS.gene058631:CDS | 30.0% | |
| AATTACGCTGAAGATTATGT+TGG | - | chr4.2:18444058-18444077 | MS.gene058631:CDS | 30.0% | |
| ACAGATGCTAAATAATTGCT+TGG | - | chr4.2:18447985-18448004 | MS.gene058631:intron | 30.0% | |
| ACGCGTTCTACAATAATAAT+AGG | + | chr4.2:18445526-18445545 | None:intergenic | 30.0% | |
| AGCAATTATTTAGCATCTGT+AGG | + | chr4.2:18447985-18448004 | None:intergenic | 30.0% | |
| AGGAAAATGGTATTATACCT+TGG | + | chr4.2:18446981-18447000 | None:intergenic | 30.0% | |
| AGGAACTTAAACACACTTAT+CGG | - | chr4.2:18448082-18448101 | MS.gene058631:CDS | 30.0% | |
| AGGGAAATCATTTGGATTTA+CGG | - | chr4.2:18446413-18446432 | MS.gene058631:intron | 30.0% | |
| ATATATGCACAACAAAGTTG+AGG | - | chr4.2:18445129-18445148 | MS.gene058631:intron | 30.0% | |
| ATATCTTCTTGATCTGTCTT+TGG | - | chr4.2:18445742-18445761 | MS.gene058631:intron | 30.0% | |
| ATGTTAATGAATGTCTGCTT+TGG | - | chr4.2:18447834-18447853 | MS.gene058631:intron | 30.0% | |
| ATTACGCTGAAGATTATGTT+GGG | - | chr4.2:18444059-18444078 | MS.gene058631:CDS | 30.0% | |
| ATTGACTAAACATAGGGAAT+AGG | - | chr4.2:18447314-18447333 | MS.gene058631:intron | 30.0% | |
| ATTGTTCACCATCAATACTT+TGG | + | chr4.2:18444440-18444459 | None:intergenic | 30.0% | |
| CGAATTCTCTATTCAATTCA+GGG | - | chr4.2:18446858-18446877 | MS.gene058631:intron | 30.0% | |
| CTAATGATCAAACTCAAATC+AGG | - | chr4.2:18444260-18444279 | MS.gene058631:intron | 30.0% | |
| CTCATAAATAATACCTGCTA+AGG | + | chr4.2:18446668-18446687 | None:intergenic | 30.0% | |
| CTCTTTCCTAAAAAGGAAAA+TGG | - | chr4.2:18446558-18446577 | MS.gene058631:CDS | 30.0% | |
| GAAGAATAAGTTGCAATAGT+GGG | + | chr4.2:18444238-18444257 | None:intergenic | 30.0% | |
| GAAGTTCATTAAATACAAGG+AGG | - | chr4.2:18445179-18445198 | MS.gene058631:intron | 30.0% | |
| GAATGTTATCTTGTGAGAAA+AGG | - | chr4.2:18444950-18444969 | MS.gene058631:intron | 30.0% | |
| GAATTCAAACTTCATTTCTG+TGG | - | chr4.2:18445574-18445593 | MS.gene058631:intron | 30.0% | |
| GATTTATGATCTTCCTGTTT+CGG | - | chr4.2:18445412-18445431 | MS.gene058631:intron | 30.0% | |
| GATTTGCAAACTACTATCTT+GGG | - | chr4.2:18445808-18445827 | MS.gene058631:CDS | 30.0% | |
| GTTTAATATTGATAGGCTGT+TGG | + | chr4.2:18447283-18447302 | None:intergenic | 30.0% | |
| TAAATTAGTAGGCATCTACA+AGG | - | chr4.2:18447582-18447601 | MS.gene058631:intron | 30.0% | |
| TATAAGCTATAAGCTCAAAC+CGG | - | chr4.2:18443735-18443754 | MS.gene058631:intron | 30.0% | |
| TATATGCACAACAAAGTTGA+GGG | - | chr4.2:18445130-18445149 | MS.gene058631:intron | 30.0% | |
| TCGAATTCTCTATTCAATTC+AGG | - | chr4.2:18446857-18446876 | MS.gene058631:intron | 30.0% | |
| TCTATTCTAGCAGAATGATA+AGG | + | chr4.2:18447914-18447933 | None:intergenic | 30.0% | |
| TGAAGAATAAGTTGCAATAG+TGG | + | chr4.2:18444239-18444258 | None:intergenic | 30.0% | |
| TGACATTAGAAACTGTATCT+CGG | + | chr4.2:18446470-18446489 | None:intergenic | 30.0% | |
| TTGCAAATCCTACAAATTGA+AGG | + | chr4.2:18445797-18445816 | None:intergenic | 30.0% | |
| TTGTTGTGCATATATTGATG+AGG | + | chr4.2:18445124-18445143 | None:intergenic | 30.0% | |
| TTTCAGTCAAATCAATAGCT+TGG | + | chr4.2:18444362-18444381 | None:intergenic | 30.0% | |
| ! | AAAGTAGAGTTGATTGGTAA+TGG | + | chr4.2:18443782-18443801 | None:intergenic | 30.0% |
| ! | AATAATTCCAGAAAGCATGA+TGG | - | chr4.2:18446766-18446785 | MS.gene058631:intron | 30.0% |
| ! | AATCAGTTCAACCTTTTTCT+TGG | - | chr4.2:18444627-18444646 | MS.gene058631:intron | 30.0% |
| ! | AATGTTGGATCATTTTCTTG+AGG | - | chr4.2:18447521-18447540 | MS.gene058631:CDS | 30.0% |
| ! | ATCAGTTCAACCTTTTTCTT+GGG | - | chr4.2:18444628-18444647 | MS.gene058631:intron | 30.0% |
| ! | ATGTTGGATCATTTTCTTGA+GGG | - | chr4.2:18447522-18447541 | MS.gene058631:CDS | 30.0% |
| ! | CTAAAGGTATATCACATTTC+AGG | - | chr4.2:18447877-18447896 | MS.gene058631:intron | 30.0% |
| ! | GAACATTGAGTTTTTCTCAT+AGG | + | chr4.2:18446178-18446197 | None:intergenic | 30.0% |
| ! | TTGGCTTTCACTTATATACA+GGG | - | chr4.2:18443115-18443134 | MS.gene058631:intron | 30.0% |
| !! | ATGAAAGTATTCTCAAGATC+AGG | + | chr4.2:18446947-18446966 | None:intergenic | 30.0% |
| !! | CTTCGGATTTTTCTAAAAGA+GGG | - | chr4.2:18447951-18447970 | MS.gene058631:intron | 30.0% |
| !! | TATTTTTCGGATTCACAAGA+TGG | + | chr4.2:18446045-18446064 | None:intergenic | 30.0% |
| !! | TCTTCGGATTTTTCTAAAAG+AGG | - | chr4.2:18447950-18447969 | MS.gene058631:intron | 30.0% |
| !! | TCTTGAGGATTTTAAAAGAC+TGG | + | chr4.2:18447746-18447765 | None:intergenic | 30.0% |
| !! | TTATGGAAAAAAGTGCTACA+AGG | + | chr4.2:18444779-18444798 | None:intergenic | 30.0% |
| !!! | CTCCTTGTTTACTTTTTAGA+AGG | - | chr4.2:18443006-18443025 | MS.gene058631:CDS | 30.0% |
| !!! | GAGTAGTTGTTTTTTGTTCA+TGG | - | chr4.2:18445685-18445704 | MS.gene058631:intron | 30.0% |
| !!! | GTTTTAGAGCACTTATTGTT+AGG | - | chr4.2:18445991-18446010 | MS.gene058631:intron | 30.0% |
| !!! | GTTTTATTTTCCCTGAGTAA+AGG | + | chr4.2:18445013-18445032 | None:intergenic | 30.0% |
| AAAGTGGTTGGCAAAATTAG+CGG | - | chr4.2:18443623-18443642 | MS.gene058631:CDS | 35.0% | |
| AACTGAATGGTCAATATGGA+TGG | - | chr4.2:18445078-18445097 | MS.gene058631:intron | 35.0% | |
| AAGAAGATATAAGAGACTGC+AGG | + | chr4.2:18445732-18445751 | None:intergenic | 35.0% | |
| AAGATGGTCGGTATTCATTT+AGG | + | chr4.2:18446029-18446048 | None:intergenic | 35.0% | |
| AATAAAATGTTGGGAAGCGA+CGG | - | chr4.2:18447054-18447073 | MS.gene058631:intron | 35.0% | |
| AATATGGATGGTGTACTCAA+AGG | - | chr4.2:18445090-18445109 | MS.gene058631:intron | 35.0% | |
| ACATTAGAAACTGTATCTCG+GGG | + | chr4.2:18446468-18446487 | None:intergenic | 35.0% | |
| ACATTTATACATCCACACCT+AGG | + | chr4.2:18446121-18446140 | None:intergenic | 35.0% | |
| ACTCCTCATCACTAAAATTC+AGG | - | chr4.2:18446393-18446412 | MS.gene058631:intron | 35.0% | |
| AGAAAAAGACAGAAACAAGG+TGG | + | chr4.2:18446315-18446334 | None:intergenic | 35.0% | |
| AGATGATCATCCCAAGAAAA+AGG | + | chr4.2:18444641-18444660 | None:intergenic | 35.0% | |
| AGATTATGTTGGGTCAAACA+AGG | - | chr4.2:18444069-18444088 | MS.gene058631:CDS | 35.0% | |
| AGGTATATCACATTTCAGGA+TGG | - | chr4.2:18447881-18447900 | MS.gene058631:intron | 35.0% | |
| ATATGCACAACAAAGTTGAG+GGG | - | chr4.2:18445131-18445150 | MS.gene058631:intron | 35.0% | |
| ATGAACTTCTGTGTAAGCTA+TGG | + | chr4.2:18445168-18445187 | None:intergenic | 35.0% | |
| ATTGTTGCATCACCTTTGTT+AGG | - | chr4.2:18443581-18443600 | MS.gene058631:CDS | 35.0% | |
| CAATCCTATTCCTTTACTCA+GGG | - | chr4.2:18445000-18445019 | MS.gene058631:intron | 35.0% | |
| CATATAAAGGAAGTTACCTG+AGG | + | chr4.2:18447419-18447438 | None:intergenic | 35.0% | |
| CATTCCAGATTAGATATGCA+AGG | - | chr4.2:18442831-18442850 | MS.gene058631:CDS | 35.0% | |
| CATTGAAAGAATTAGGACCA+CGG | + | chr4.2:18444496-18444515 | None:intergenic | 35.0% | |
| CGCATTATTGCAGTTTGAAT+AGG | + | chr4.2:18445330-18445349 | None:intergenic | 35.0% | |
| CTCCTCATCACTAAAATTCA+GGG | - | chr4.2:18446394-18446413 | MS.gene058631:intron | 35.0% | |
| CTGTTGAATGATATGGTTAG+TGG | - | chr4.2:18444002-18444021 | MS.gene058631:CDS | 35.0% | |
| CTTGCATATCTAATCTGGAA+TGG | + | chr4.2:18442833-18442852 | None:intergenic | 35.0% | |
| CTTTGTCACCTTCAATTTGT+AGG | - | chr4.2:18445786-18445805 | MS.gene058631:CDS | 35.0% | |
| GAAAACAAGGAAGAGAACAT+AGG | + | chr4.2:18443904-18443923 | None:intergenic | 35.0% | |
| GACATTAGAAACTGTATCTC+GGG | + | chr4.2:18446469-18446488 | None:intergenic | 35.0% | |
| GATACAGTTTCTAATGTCAG+AGG | - | chr4.2:18446471-18446490 | MS.gene058631:intron | 35.0% | |
| GATCTGAAAAGAATAAGCAC+AGG | - | chr4.2:18444330-18444349 | MS.gene058631:CDS | 35.0% | |
| GATTGAGTCAAATGCTGTAA+AGG | - | chr4.2:18443271-18443290 | MS.gene058631:intron | 35.0% | |
| GCAAATGAAGAGAAAACATC+TGG | - | chr4.2:18446493-18446512 | MS.gene058631:intron | 35.0% | |
| GGATTTGCAAACTACTATCT+TGG | - | chr4.2:18445807-18445826 | MS.gene058631:CDS | 35.0% | |
| GGTGACAAAGTAACAAGATA+AGG | + | chr4.2:18445776-18445795 | None:intergenic | 35.0% | |
| GGTTTCTATTAGCAACATGA+AGG | - | chr4.2:18444919-18444938 | MS.gene058631:intron | 35.0% | |
| GTAACTTCCTTTATATGCTG+TGG | - | chr4.2:18447422-18447441 | MS.gene058631:intron | 35.0% | |
| TACTATCCACTATAAGCTAG+CGG | - | chr4.2:18443816-18443835 | MS.gene058631:intron | 35.0% | |
| TAGGGAGTAGATAGAAAACA+AGG | + | chr4.2:18443917-18443936 | None:intergenic | 35.0% | |
| TATCGGTAATCTCATTGTCA+GGG | - | chr4.2:18446639-18446658 | MS.gene058631:CDS | 35.0% | |
| TATTGACATCGTGACTTCTT+AGG | - | chr4.2:18447638-18447657 | MS.gene058631:intron | 35.0% | |
| TCAATCCTATTCCTTTACTC+AGG | - | chr4.2:18444999-18445018 | MS.gene058631:intron | 35.0% | |
| TGGAAAACAAGACAGAAACA+AGG | + | chr4.2:18446349-18446368 | None:intergenic | 35.0% | |
| TGGCTATTGAAGAAGTTCAA+GGG | - | chr4.2:18446884-18446903 | MS.gene058631:intron | 35.0% | |
| TTATCACACAATTCGACAGA+AGG | - | chr4.2:18443507-18443526 | MS.gene058631:intron | 35.0% | |
| TTGAATTCAAACTGGCAGAA+CGG | + | chr4.2:18445562-18445581 | None:intergenic | 35.0% | |
| TTGGCTATTGAAGAAGTTCA+AGG | - | chr4.2:18446883-18446902 | MS.gene058631:intron | 35.0% | |
| TTTCGATGCAGATCAACAAT+CGG | - | chr4.2:18445457-18445476 | MS.gene058631:intron | 35.0% | |
| ! | AAAAGGTTGAACTGATTCCT+CGG | + | chr4.2:18444624-18444643 | None:intergenic | 35.0% |
| ! | CTTGGCTTTCACTTATATAC+AGG | - | chr4.2:18443114-18443133 | MS.gene058631:intron | 35.0% |
| ! | GTATACCTATGTGTCGATAT+CGG | - | chr4.2:18446808-18446827 | MS.gene058631:intron | 35.0% |
| ! | GTTAAAGTTTTGCACTGTGT+AGG | - | chr4.2:18442972-18442991 | MS.gene058631:CDS | 35.0% |
| ! | TATACCTATGTGTCGATATC+GGG | - | chr4.2:18446809-18446828 | MS.gene058631:intron | 35.0% |
| ! | TATGATTGGTTGTGATTTGC+TGG | - | chr4.2:18447237-18447256 | MS.gene058631:intron | 35.0% |
| ! | TGCTTCAATGTGATCTGTTT+TGG | - | chr4.2:18446283-18446302 | MS.gene058631:CDS | 35.0% |
| ! | TTCTTTTCAGATCTTCAAGC+AGG | + | chr4.2:18444323-18444342 | None:intergenic | 35.0% |
| ! | TTGTTTTCAGCACTAGGAAA+AGG | + | chr4.2:18447009-18447028 | None:intergenic | 35.0% |
| ! | TTTCCTAGTGCTGAAAACAA+TGG | - | chr4.2:18447009-18447028 | MS.gene058631:intron | 35.0% |
| ! | TTTTCCCTGAGTAAAGGAAT+AGG | + | chr4.2:18445007-18445026 | None:intergenic | 35.0% |
| !! | ACTTCAGAGAAATGGGTTTT+CGG | - | chr4.2:18446518-18446537 | MS.gene058631:CDS | 35.0% |
| !! | ATCTCATTCTACCTAGCTTT+TGG | - | chr4.2:18442878-18442897 | MS.gene058631:CDS | 35.0% |
| !! | GCTGAAAACAATGGACTTTT+TGG | - | chr4.2:18447018-18447037 | MS.gene058631:intron | 35.0% |
| !! | GTCCACAAACAAGTTTTAGT+GGG | - | chr4.2:18445634-18445653 | MS.gene058631:CDS | 35.0% |
| !! | TTCCCTGAATTTTAGTGATG+AGG | + | chr4.2:18446399-18446418 | None:intergenic | 35.0% |
| !!! | GTTTTTTGTTCATGGGTTTC+AGG | - | chr4.2:18445693-18445712 | MS.gene058631:intron | 35.0% |
| AAAAATCCGAAGAAGCTGCT+GGG | + | chr4.2:18447943-18447962 | None:intergenic | 40.0% | |
| AACTTCAACGCTTCTTCCTA+CGG | - | chr4.2:18448058-18448077 | MS.gene058631:intron | 40.0% | |
| AAGATCAGGATCATCCGTAA+AGG | + | chr4.2:18446933-18446952 | None:intergenic | 40.0% | |
| AGCAGCTCATATAGAGTTCT+TGG | - | chr4.2:18448108-18448127 | MS.gene058631:CDS | 40.0% | |
| AGCTTCGTTGGTCATTCTAT+CGG | - | chr4.2:18446622-18446641 | MS.gene058631:CDS | 40.0% | |
| ATAAAATGTTGGGAAGCGAC+GGG | - | chr4.2:18447055-18447074 | MS.gene058631:intron | 40.0% | |
| CATCCATCAACTGACCTTTA+CGG | - | chr4.2:18446916-18446935 | MS.gene058631:CDS | 40.0% | |
| CCTCATATTCACCAAAAGCT+AGG | + | chr4.2:18442892-18442911 | None:intergenic | 40.0% | |
| CGAATCAGCTCTTATATCTC+TGG | - | chr4.2:18444684-18444703 | MS.gene058631:intron | 40.0% | |
| CTATCGGTAATCTCATTGTC+AGG | - | chr4.2:18446638-18446657 | MS.gene058631:CDS | 40.0% | |
| CTCTATTCAATTCAGGGCTT+TGG | - | chr4.2:18446864-18446883 | MS.gene058631:intron | 40.0% | |
| CTGAAATGAAATCCTAGGTG+TGG | - | chr4.2:18446106-18446125 | MS.gene058631:intron | 40.0% | |
| CTGTACATATAACCCAAGTG+TGG | + | chr4.2:18446836-18446855 | None:intergenic | 40.0% | |
| GAATTGTACCAGTGACTGTA+GGG | - | chr4.2:18444024-18444043 | MS.gene058631:CDS | 40.0% | |
| GGAAAAGGAGACAAGGAAAA+TGG | + | chr4.2:18446994-18447013 | None:intergenic | 40.0% | |
| GGAGAACTGAATGGTCAATA+TGG | - | chr4.2:18445074-18445093 | MS.gene058631:intron | 40.0% | |
| GTAATCCCAGAAGAGCTTTA+GGG | + | chr4.2:18443404-18443423 | None:intergenic | 40.0% | |
| GTCTGATTTACAAGGTTCAC+TGG | - | chr4.2:18443341-18443360 | MS.gene058631:intron | 40.0% | |
| GTTAAAGTCACGCGTATGAT+TGG | - | chr4.2:18447223-18447242 | MS.gene058631:intron | 40.0% | |
| TAATGCGTGCAGAACTTCAT+AGG | - | chr4.2:18445343-18445362 | MS.gene058631:intron | 40.0% | |
| TGAATTTCTGCGCAAATCCT+GGG | - | chr4.2:18445042-18445061 | MS.gene058631:intron | 40.0% | |
| TGTAATCCCAGAAGAGCTTT+AGG | + | chr4.2:18443405-18443424 | None:intergenic | 40.0% | |
| TTCGATGCAGATCAACAATC+GGG | - | chr4.2:18445458-18445477 | MS.gene058631:intron | 40.0% | |
| TTGAATTTCTGCGCAAATCC+TGG | - | chr4.2:18445041-18445060 | MS.gene058631:intron | 40.0% | |
| TTGCATTACATTCATTGCGC+AGG | - | chr4.2:18443319-18443338 | MS.gene058631:intron | 40.0% | |
| TTGTATCAACCATGACAGCA+TGG | + | chr4.2:18443459-18443478 | None:intergenic | 40.0% | |
| TTTCGGATTCACAAGATGGT+CGG | + | chr4.2:18446041-18446060 | None:intergenic | 40.0% | |
| TTTCTGTGGAGAATGATGCA+AGG | - | chr4.2:18445588-18445607 | MS.gene058631:intron | 40.0% | |
| ! | AAGTTTTGCACTGTGTAGGA+TGG | - | chr4.2:18442976-18442995 | MS.gene058631:CDS | 40.0% |
| ! | AGTCCATTGTTTTCAGCACT+AGG | + | chr4.2:18447015-18447034 | None:intergenic | 40.0% |
| ! | ATTCTCTCACGAGCTTTTAC+CGG | + | chr4.2:18443757-18443776 | None:intergenic | 40.0% |
| ! | CATGCTTCTCTTTCCCTTTT+TGG | - | chr4.2:18443205-18443224 | MS.gene058631:intron | 40.0% |
| ! | CTAAAACTTGTTTGTGGACC+TGG | + | chr4.2:18445633-18445652 | None:intergenic | 40.0% |
| ! | CTCCCACTAAAACTTGTTTG+TGG | + | chr4.2:18445639-18445658 | None:intergenic | 40.0% |
| ! | CTTTTAGCACTAACCACCAA+AGG | - | chr4.2:18445880-18445899 | MS.gene058631:CDS | 40.0% |
| ! | GCATATCTAATCTGGAATGG+CGG | + | chr4.2:18442830-18442849 | None:intergenic | 40.0% |
| ! | TAATCCCAGAAGAGCTTTAG+GGG | + | chr4.2:18443403-18443422 | None:intergenic | 40.0% |
| ! | TCAAAACATGCCCATTTTGC+TGG | + | chr4.2:18445665-18445684 | None:intergenic | 40.0% |
| !! | AGCATGGAAAGCATCAAAAG+TGG | + | chr4.2:18443443-18443462 | None:intergenic | 40.0% |
| !! | CAGCTCTGAAATGAAATCCT+AGG | - | chr4.2:18446101-18446120 | MS.gene058631:intron | 40.0% |
| !! | CCTAGCTTTTGGTGAATATG+AGG | - | chr4.2:18442889-18442908 | MS.gene058631:CDS | 40.0% |
| !! | GATGCTCATCAAAGCATTGA+TGG | - | chr4.2:18444284-18444303 | MS.gene058631:intron | 40.0% |
| !! | GGAAAGCATCAAAAGTGGAT+AGG | + | chr4.2:18443438-18443457 | None:intergenic | 40.0% |
| !! | GGTCCACAAACAAGTTTTAG+TGG | - | chr4.2:18445633-18445652 | MS.gene058631:CDS | 40.0% |
| AAATTCCAGTCAGCCGAAAC+AGG | + | chr4.2:18445428-18445447 | None:intergenic | 45.0% | |
| ACCAAAGGCTTATACCACCA+AGG | - | chr4.2:18445895-18445914 | MS.gene058631:CDS | 45.0% | |
| ACTAACCCAGTAGCAGTCAT+AGG | + | chr4.2:18443184-18443203 | None:intergenic | 45.0% | |
| AGCACTAGGAAAAGGAGACA+AGG | + | chr4.2:18447001-18447020 | None:intergenic | 45.0% | |
| AGTGACTGTAGGGATTCAGA+AGG | - | chr4.2:18444034-18444053 | MS.gene058631:CDS | 45.0% | |
| ATCTGGCGACTTCAGAGAAA+TGG | - | chr4.2:18446510-18446529 | MS.gene058631:CDS | 45.0% | |
| ATGCTCCTATGACTGCTACT+GGG | - | chr4.2:18443176-18443195 | MS.gene058631:intron | 45.0% | |
| ATGTCCTAAGCAATGGTTCC+AGG | - | chr4.2:18445612-18445631 | MS.gene058631:CDS | 45.0% | |
| CATCCGTAAAGGTCAGTTGA+TGG | + | chr4.2:18446922-18446941 | None:intergenic | 45.0% | |
| CCAGATTAGATATGCAAGGC+AGG | - | chr4.2:18442835-18442854 | MS.gene058631:CDS | 45.0% | |
| CCTGCCTTGCATATCTAATC+TGG | + | chr4.2:18442838-18442857 | None:intergenic | 45.0% | |
| CGGGGTCTATTAAAAGCCAT+TGG | + | chr4.2:18446450-18446469 | None:intergenic | 45.0% | |
| CTGTTGATCGGAGAACTGAA+TGG | - | chr4.2:18445065-18445084 | MS.gene058631:intron | 45.0% | |
| CTTATACCACCAAGGCTTAG+GGG | - | chr4.2:18445903-18445922 | MS.gene058631:CDS | 45.0% | |
| GAAAAATCCGAAGAAGCTGC+TGG | + | chr4.2:18447944-18447963 | None:intergenic | 45.0% | |
| GAGAAGACGCTGGAAAACTT+CGG | - | chr4.2:18447373-18447392 | MS.gene058631:intron | 45.0% | |
| GATATCAAGCTCAGCTTCGT+TGG | - | chr4.2:18446610-18446629 | MS.gene058631:CDS | 45.0% | |
| GCGAGGCATATCACAAATGA+GGG | - | chr4.2:18445365-18445384 | MS.gene058631:intron | 45.0% | |
| GCTTATACCACCAAGGCTTA+GGG | - | chr4.2:18445902-18445921 | MS.gene058631:CDS | 45.0% | |
| GGAATTGTACCAGTGACTGT+AGG | - | chr4.2:18444023-18444042 | MS.gene058631:CDS | 45.0% | |
| TAAAATGTTGGGAAGCGACG+GGG | - | chr4.2:18447056-18447075 | MS.gene058631:intron | 45.0% | |
| TATGGCTCCATCATGCTTTC+TGG | + | chr4.2:18446776-18446795 | None:intergenic | 45.0% | |
| TCAATACTTTGGACACGTGC+TGG | + | chr4.2:18444429-18444448 | None:intergenic | 45.0% | |
| TCCACTATAAGCTAGCGGTT+TGG | - | chr4.2:18443821-18443840 | MS.gene058631:intron | 45.0% | |
| TCTGGCGACTTCAGAGAAAT+GGG | - | chr4.2:18446511-18446530 | MS.gene058631:CDS | 45.0% | |
| TGAAATTGTCCCCTAAGCCT+TGG | + | chr4.2:18445915-18445934 | None:intergenic | 45.0% | |
| TGATGCTTTCCATGCTGTCA+TGG | - | chr4.2:18443447-18443466 | MS.gene058631:intron | 45.0% | |
| TTCTGAATCCCTACAGTCAC+TGG | + | chr4.2:18444035-18444054 | None:intergenic | 45.0% | |
| TTGCGCAGGTCTGATTTACA+AGG | - | chr4.2:18443333-18443352 | MS.gene058631:intron | 45.0% | |
| ! | GTTTCTTTTATCCTCGCCTC+AGG | - | chr4.2:18447400-18447419 | MS.gene058631:intron | 45.0% |
| ! | TACGGCTTGTTCGTAACCAA+TGG | - | chr4.2:18446431-18446450 | MS.gene058631:intron | 45.0% |
| ! | TGTGTTTAAGTTCCTGCCGT+AGG | + | chr4.2:18448077-18448096 | None:intergenic | 45.0% |
| ! | TTGGTGGTATAAGCCTTTGG+TGG | + | chr4.2:18445896-18445915 | None:intergenic | 45.0% |
| !! | AATCCCAGAAGAGCTTTAGG+GGG | + | chr4.2:18443402-18443421 | None:intergenic | 45.0% |
| !! | CAATTCGACAGAAGGTACCA+AGG | - | chr4.2:18443515-18443534 | MS.gene058631:intron | 45.0% |
| !! | GCACGTGTCCAAAGTATTGA+TGG | - | chr4.2:18444429-18444448 | MS.gene058631:CDS | 45.0% |
| !! | AAAAATAAAAAATTAAAGTA+GGG | - | chr4.2:18446717-18446736 | MS.gene058631:intron | 5.0% |
| !! | TTAAATAATTATTTAAACAT+AGG | + | chr4.2:18444741-18444760 | None:intergenic | 5.0% |
| !!! | ATTTTATTTTTAATTTCTAA+AGG | - | chr4.2:18447861-18447880 | MS.gene058631:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTTTG+TGG | - | chr4.2:18444133-18444152 | MS.gene058631:CDS | 5.0% |
| AAAGGAAGTTACCTGAGGCG+AGG | + | chr4.2:18447414-18447433 | None:intergenic | 50.0% | |
| AATCACCTCAGCTGCCTGAT+AGG | - | chr4.2:18444457-18444476 | MS.gene058631:CDS | 50.0% | |
| AATCCCCCCTAAAGCTCTTC+TGG | - | chr4.2:18443395-18443414 | MS.gene058631:intron | 50.0% | |
| AATTGTCCCCTAAGCCTTGG+TGG | + | chr4.2:18445912-18445931 | None:intergenic | 50.0% | |
| AGTGGGAGTAGCCAGCAAAA+TGG | - | chr4.2:18445651-18445670 | MS.gene058631:intron | 50.0% | |
| ATCACCTCAGCTGCCTGATA+GGG | - | chr4.2:18444458-18444477 | MS.gene058631:CDS | 50.0% | |
| ATCCCCCCTAAAGCTCTTCT+GGG | - | chr4.2:18443396-18443415 | MS.gene058631:intron | 50.0% | |
| ATCTTCCTGTTTCGGCTGAC+TGG | - | chr4.2:18445420-18445439 | MS.gene058631:intron | 50.0% | |
| CATGATTACGCGATGGTCAG+AGG | + | chr4.2:18448026-18448045 | None:intergenic | 50.0% | |
| CATGCTCCTATGACTGCTAC+TGG | - | chr4.2:18443175-18443194 | MS.gene058631:intron | 50.0% | |
| CCAAATACAGGAGAAGACGC+TGG | - | chr4.2:18447363-18447382 | MS.gene058631:intron | 50.0% | |
| CCAGCGTCTTCTCCTGTATT+TGG | + | chr4.2:18447366-18447385 | None:intergenic | 50.0% | |
| GCAAATCCTGGGCTGTTGAT+CGG | - | chr4.2:18445053-18445072 | MS.gene058631:intron | 50.0% | |
| GCAAGGCATGTCCTAAGCAA+TGG | - | chr4.2:18445605-18445624 | MS.gene058631:CDS | 50.0% | |
| GGCGAGGCATATCACAAATG+AGG | - | chr4.2:18445364-18445383 | MS.gene058631:intron | 50.0% | |
| GGCTTATACCACCAAGGCTT+AGG | - | chr4.2:18445901-18445920 | MS.gene058631:CDS | 50.0% | |
| GGTCAGAGGAAGTTCGGATT+TGG | + | chr4.2:18448012-18448031 | None:intergenic | 50.0% | |
| GTGGGAGTAGCCAGCAAAAT+GGG | - | chr4.2:18445652-18445671 | MS.gene058631:intron | 50.0% | |
| TCGATATCGGGTCCACACTT+GGG | - | chr4.2:18446821-18446840 | MS.gene058631:intron | 50.0% | |
| TGGACCCGATATCGACACAT+AGG | + | chr4.2:18446816-18446835 | None:intergenic | 50.0% | |
| TGGACCTGGAACCATTGCTT+AGG | + | chr4.2:18445619-18445638 | None:intergenic | 50.0% | |
| ! | ACTGGAGCTCTGACAAACCT+TGG | + | chr4.2:18443535-18443554 | None:intergenic | 50.0% |
| ! | GCCAAACCGCTAGCTTATAG+TGG | + | chr4.2:18443825-18443844 | None:intergenic | 50.0% |
| ! | GCCTTGGTGGTATAAGCCTT+TGG | + | chr4.2:18445899-18445918 | None:intergenic | 50.0% |
| !! | AATGGGTTTTCGGCTTGCTC+AGG | - | chr4.2:18446528-18446547 | MS.gene058631:CDS | 50.0% |
| !! | ATCCCAGAAGAGCTTTAGGG+GGG | + | chr4.2:18443401-18443420 | None:intergenic | 50.0% |
| !! | GCACTGACTTCTTCCCTATC+AGG | + | chr4.2:18444474-18444493 | None:intergenic | 50.0% |
| !! | TGATGGGTTTAGGCTCCGTT+TGG | + | chr4.2:18443852-18443871 | None:intergenic | 50.0% |
| ACTGTGCCCAGCAGCTTCTT+CGG | - | chr4.2:18447934-18447953 | MS.gene058631:intron | 55.0% | |
| AGTTCTCCGATCAACAGCCC+AGG | + | chr4.2:18445062-18445081 | None:intergenic | 55.0% | |
| ATTGTCAGGGCAGCCTTAGC+AGG | - | chr4.2:18446652-18446671 | MS.gene058631:CDS | 55.0% | |
| CGCGATGGTCAGAGGAAGTT+CGG | + | chr4.2:18448018-18448037 | None:intergenic | 55.0% | |
| CGTGCAGAACTTCATAGGCG+AGG | - | chr4.2:18445348-18445367 | MS.gene058631:intron | 55.0% | |
| GGTTTAGGCTCCGTTTGGCA+AGG | + | chr4.2:18443847-18443866 | None:intergenic | 55.0% | |
| GTCGATATCGGGTCCACACT+TGG | - | chr4.2:18446820-18446839 | MS.gene058631:intron | 55.0% | |
| TAGGGAAGAAGTCAGTGCCG+TGG | - | chr4.2:18444476-18444495 | MS.gene058631:CDS | 55.0% | |
| TCAACGCTTCTTCCTACGGC+AGG | - | chr4.2:18448062-18448081 | MS.gene058631:intron | 55.0% | |
| TCTTCCCTATCAGGCAGCTG+AGG | + | chr4.2:18444465-18444484 | None:intergenic | 55.0% | |
| !! | AGCGGTTTGGCCTTGCCAAA+CGG | - | chr4.2:18443834-18443853 | MS.gene058631:intron | 55.0% |
| CGCAGCGCATGATTACGCGA+TGG | + | chr4.2:18448033-18448052 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 18442794 | 18448186 | 18442794 | ID=MS.gene058631 |
| chr4.2 | mRNA | 18442794 | 18448186 | 18442794 | ID=MS.gene058631.t1;Parent=MS.gene058631 |
| chr4.2 | exon | 18448070 | 18448186 | 18448070 | ID=MS.gene058631.t1.exon1;Parent=MS.gene058631.t1 |
| chr4.2 | CDS | 18448070 | 18448186 | 18448070 | ID=cds.MS.gene058631.t1;Parent=MS.gene058631.t1 |
| chr4.2 | exon | 18447783 | 18447844 | 18447783 | ID=MS.gene058631.t1.exon2;Parent=MS.gene058631.t1 |
| chr4.2 | CDS | 18447783 | 18447844 | 18447783 | ID=cds.MS.gene058631.t1;Parent=MS.gene058631.t1 |
| chr4.2 | exon | 18447444 | 18447590 | 18447444 | ID=MS.gene058631.t1.exon3;Parent=MS.gene058631.t1 |
| chr4.2 | CDS | 18447444 | 18447590 | 18447444 | ID=cds.MS.gene058631.t1;Parent=MS.gene058631.t1 |
| chr4.2 | exon | 18446890 | 18446944 | 18446890 | ID=MS.gene058631.t1.exon4;Parent=MS.gene058631.t1 |
| chr4.2 | CDS | 18446890 | 18446944 | 18446890 | ID=cds.MS.gene058631.t1;Parent=MS.gene058631.t1 |
| chr4.2 | exon | 18446495 | 18446698 | 18446495 | ID=MS.gene058631.t1.exon5;Parent=MS.gene058631.t1 |
| chr4.2 | CDS | 18446495 | 18446698 | 18446495 | ID=cds.MS.gene058631.t1;Parent=MS.gene058631.t1 |
| chr4.2 | exon | 18446248 | 18446387 | 18446248 | ID=MS.gene058631.t1.exon6;Parent=MS.gene058631.t1 |
| chr4.2 | CDS | 18446248 | 18446387 | 18446248 | ID=cds.MS.gene058631.t1;Parent=MS.gene058631.t1 |
| chr4.2 | exon | 18445767 | 18445959 | 18445767 | ID=MS.gene058631.t1.exon7;Parent=MS.gene058631.t1 |
| chr4.2 | CDS | 18445767 | 18445959 | 18445767 | ID=cds.MS.gene058631.t1;Parent=MS.gene058631.t1 |
| chr4.2 | exon | 18445594 | 18445653 | 18445594 | ID=MS.gene058631.t1.exon8;Parent=MS.gene058631.t1 |
| chr4.2 | CDS | 18445594 | 18445653 | 18445594 | ID=cds.MS.gene058631.t1;Parent=MS.gene058631.t1 |
| chr4.2 | exon | 18444307 | 18444565 | 18444307 | ID=MS.gene058631.t1.exon9;Parent=MS.gene058631.t1 |
| chr4.2 | CDS | 18444307 | 18444565 | 18444307 | ID=cds.MS.gene058631.t1;Parent=MS.gene058631.t1 |
| chr4.2 | exon | 18443998 | 18444203 | 18443998 | ID=MS.gene058631.t1.exon10;Parent=MS.gene058631.t1 |
| chr4.2 | CDS | 18443998 | 18444203 | 18443998 | ID=cds.MS.gene058631.t1;Parent=MS.gene058631.t1 |
| chr4.2 | exon | 18443559 | 18443651 | 18443559 | ID=MS.gene058631.t1.exon11;Parent=MS.gene058631.t1 |
| chr4.2 | CDS | 18443559 | 18443651 | 18443559 | ID=cds.MS.gene058631.t1;Parent=MS.gene058631.t1 |
| chr4.2 | exon | 18442794 | 18443081 | 18442794 | ID=MS.gene058631.t1.exon12;Parent=MS.gene058631.t1 |
| chr4.2 | CDS | 18442794 | 18443081 | 18442794 | ID=cds.MS.gene058631.t1;Parent=MS.gene058631.t1 |
| Gene Sequence |
| Protein sequence |
