Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065593.t1 | XP_024639644.1 | 98.4 | 980 | 16 | 0 | 1 | 980 | 1 | 980 | 0.00E+00 | 1874 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065593.t1 | Q8L5Y0 | 69.5 | 1001 | 283 | 11 | 1 | 980 | 1 | 1000 | 0.0e+00 | 1329.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065593.t1 | A0A396HP19 | 98.4 | 980 | 16 | 0 | 1 | 980 | 1 | 980 | 0.0e+00 | 1874.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene065593 | 0.844705 | 6.41E-59 | -1.69E-46 |
MS.gene049283 | MS.gene065593 | 0.810512 | 1.11E-50 | -1.69E-46 |
MS.gene049368 | MS.gene065593 | 0.813179 | 2.92E-51 | -1.69E-46 |
MS.gene049685 | MS.gene065593 | 0.80254 | 5.35E-49 | -1.69E-46 |
MS.gene049801 | MS.gene065593 | 0.800363 | 1.49E-48 | -1.69E-46 |
MS.gene049807 | MS.gene065593 | 0.812559 | 3.99E-51 | -1.69E-46 |
MS.gene049887 | MS.gene065593 | 0.808542 | 2.94E-50 | -1.69E-46 |
MS.gene049983 | MS.gene065593 | 0.806991 | 6.28E-50 | -1.69E-46 |
MS.gene050084 | MS.gene065593 | 0.819512 | 1.12E-52 | -1.69E-46 |
MS.gene050085 | MS.gene065593 | 0.831839 | 1.33E-55 | -1.69E-46 |
MS.gene050114 | MS.gene065593 | 0.818473 | 1.92E-52 | -1.69E-46 |
MS.gene050116 | MS.gene065593 | 0.837185 | 6.03E-57 | -1.69E-46 |
MS.gene050213 | MS.gene065593 | 0.847165 | 1.37E-59 | -1.69E-46 |
MS.gene050224 | MS.gene065593 | 0.838615 | 2.59E-57 | -1.69E-46 |
MS.gene050348 | MS.gene065593 | 0.807472 | 4.97E-50 | -1.69E-46 |
MS.gene050359 | MS.gene065593 | 0.856607 | 2.87E-62 | -1.69E-46 |
MS.gene050361 | MS.gene065593 | 0.823294 | 1.50E-53 | -1.69E-46 |
MS.gene050386 | MS.gene065593 | 0.804937 | 1.70E-49 | -1.69E-46 |
MS.gene050414 | MS.gene065593 | 0.829222 | 5.81E-55 | -1.69E-46 |
MS.gene050551 | MS.gene065593 | 0.856105 | 4.03E-62 | -1.69E-46 |
MS.gene050556 | MS.gene065593 | 0.850982 | 1.19E-60 | -1.69E-46 |
MS.gene050646 | MS.gene065593 | 0.853861 | 1.81E-61 | -1.69E-46 |
MS.gene050654 | MS.gene065593 | 0.853872 | 1.79E-61 | -1.69E-46 |
MS.gene050838 | MS.gene065593 | 0.827854 | 1.24E-54 | -1.69E-46 |
MS.gene050931 | MS.gene065593 | 0.820788 | 5.70E-53 | -1.69E-46 |
MS.gene050941 | MS.gene065593 | 0.80745 | 5.02E-50 | -1.69E-46 |
MS.gene051102 | MS.gene065593 | 0.85598 | 4.38E-62 | -1.69E-46 |
MS.gene051184 | MS.gene065593 | 0.81172 | 6.08E-51 | -1.69E-46 |
MS.gene051198 | MS.gene065593 | 0.809723 | 1.64E-50 | -1.69E-46 |
MS.gene051209 | MS.gene065593 | 0.802311 | 5.96E-49 | -1.69E-46 |
MS.gene051343 | MS.gene065593 | 0.839992 | 1.14E-57 | -1.69E-46 |
MS.gene051381 | MS.gene065593 | 0.836924 | 7.03E-57 | -1.69E-46 |
MS.gene051490 | MS.gene065593 | 0.801715 | 7.90E-49 | -1.69E-46 |
MS.gene051724 | MS.gene065593 | 0.818218 | 2.20E-52 | -1.69E-46 |
MS.gene051800 | MS.gene065593 | 0.812554 | 4.00E-51 | -1.69E-46 |
MS.gene051809 | MS.gene065593 | 0.811291 | 7.54E-51 | -1.69E-46 |
MS.gene051819 | MS.gene065593 | 0.82608 | 3.30E-54 | -1.69E-46 |
MS.gene051852 | MS.gene065593 | 0.83373 | 4.51E-56 | -1.69E-46 |
MS.gene051856 | MS.gene065593 | 0.811297 | 7.51E-51 | -1.69E-46 |
MS.gene052016 | MS.gene065593 | 0.826521 | 2.59E-54 | -1.69E-46 |
MS.gene052072 | MS.gene065593 | 0.802631 | 5.12E-49 | -1.69E-46 |
MS.gene052242 | MS.gene065593 | -0.853495 | 2.30E-61 | -1.69E-46 |
MS.gene052307 | MS.gene065593 | 0.878024 | 3.92E-69 | -1.69E-46 |
MS.gene052335 | MS.gene065593 | 0.812335 | 4.47E-51 | -1.69E-46 |
MS.gene052342 | MS.gene065593 | 0.811927 | 5.48E-51 | -1.69E-46 |
MS.gene052397 | MS.gene065593 | 0.804783 | 1.83E-49 | -1.69E-46 |
MS.gene052434 | MS.gene065593 | 0.803188 | 3.93E-49 | -1.69E-46 |
MS.gene052463 | MS.gene065593 | 0.83057 | 2.73E-55 | -1.69E-46 |
MS.gene052514 | MS.gene065593 | 0.809814 | 1.57E-50 | -1.69E-46 |
MS.gene052516 | MS.gene065593 | 0.811229 | 7.77E-51 | -1.69E-46 |
MS.gene052609 | MS.gene065593 | 0.917512 | 4.85E-86 | -1.69E-46 |
MS.gene052665 | MS.gene065593 | 0.803593 | 3.24E-49 | -1.69E-46 |
MS.gene052775 | MS.gene065593 | 0.821459 | 3.99E-53 | -1.69E-46 |
MS.gene052776 | MS.gene065593 | 0.872758 | 2.49E-67 | -1.69E-46 |
MS.gene052932 | MS.gene065593 | 0.821321 | 4.30E-53 | -1.69E-46 |
MS.gene052994 | MS.gene065593 | 0.833094 | 6.50E-56 | -1.69E-46 |
MS.gene053079 | MS.gene065593 | 0.873401 | 1.51E-67 | -1.69E-46 |
MS.gene053143 | MS.gene065593 | 0.875311 | 3.40E-68 | -1.69E-46 |
MS.gene053167 | MS.gene065593 | 0.814846 | 1.25E-51 | -1.69E-46 |
MS.gene053486 | MS.gene065593 | 0.837019 | 6.65E-57 | -1.69E-46 |
MS.gene053620 | MS.gene065593 | 0.831782 | 1.37E-55 | -1.69E-46 |
MS.gene053726 | MS.gene065593 | 0.822074 | 2.88E-53 | -1.69E-46 |
MS.gene054178 | MS.gene065593 | 0.802297 | 6.00E-49 | -1.69E-46 |
MS.gene054558 | MS.gene065593 | 0.806044 | 9.96E-50 | -1.69E-46 |
MS.gene054576 | MS.gene065593 | 0.82833 | 9.55E-55 | -1.69E-46 |
MS.gene054709 | MS.gene065593 | 0.817588 | 3.05E-52 | -1.69E-46 |
MS.gene054824 | MS.gene065593 | 0.870586 | 1.31E-66 | -1.69E-46 |
MS.gene054892 | MS.gene065593 | 0.821274 | 4.40E-53 | -1.69E-46 |
MS.gene054893 | MS.gene065593 | 0.822279 | 2.58E-53 | -1.69E-46 |
MS.gene055311 | MS.gene065593 | 0.824765 | 6.76E-54 | -1.69E-46 |
MS.gene055313 | MS.gene065593 | 0.816246 | 6.10E-52 | -1.69E-46 |
MS.gene055467 | MS.gene065593 | 0.800411 | 1.46E-48 | -1.69E-46 |
MS.gene055469 | MS.gene065593 | 0.869425 | 3.13E-66 | -1.69E-46 |
MS.gene055513 | MS.gene065593 | 0.842928 | 1.92E-58 | -1.69E-46 |
MS.gene055864 | MS.gene065593 | 0.860287 | 2.29E-63 | -1.69E-46 |
MS.gene056045 | MS.gene065593 | 0.83866 | 2.52E-57 | -1.69E-46 |
MS.gene056097 | MS.gene065593 | 0.850884 | 1.27E-60 | -1.69E-46 |
MS.gene05615 | MS.gene065593 | 0.813669 | 2.28E-51 | -1.69E-46 |
MS.gene056181 | MS.gene065593 | 0.852132 | 5.64E-61 | -1.69E-46 |
MS.gene056308 | MS.gene065593 | 0.847782 | 9.30E-60 | -1.69E-46 |
MS.gene056390 | MS.gene065593 | 0.816782 | 4.63E-52 | -1.69E-46 |
MS.gene056507 | MS.gene065593 | 0.87276 | 2.48E-67 | -1.69E-46 |
MS.gene056519 | MS.gene065593 | 0.805396 | 1.36E-49 | -1.69E-46 |
MS.gene056578 | MS.gene065593 | 0.816646 | 4.97E-52 | -1.69E-46 |
MS.gene056622 | MS.gene065593 | 0.818801 | 1.62E-52 | -1.69E-46 |
MS.gene056699 | MS.gene065593 | 0.80985 | 1.54E-50 | -1.69E-46 |
MS.gene056787 | MS.gene065593 | 0.822788 | 1.96E-53 | -1.69E-46 |
MS.gene057360 | MS.gene065593 | 0.804738 | 1.87E-49 | -1.69E-46 |
MS.gene057869 | MS.gene065593 | 0.816685 | 4.87E-52 | -1.69E-46 |
MS.gene057919 | MS.gene065593 | 0.831135 | 1.98E-55 | -1.69E-46 |
MS.gene058010 | MS.gene065593 | 0.81811 | 2.33E-52 | -1.69E-46 |
MS.gene058054 | MS.gene065593 | 0.818663 | 1.74E-52 | -1.69E-46 |
MS.gene058081 | MS.gene065593 | 0.821869 | 3.21E-53 | -1.69E-46 |
MS.gene058289 | MS.gene065593 | 0.859445 | 4.12E-63 | -1.69E-46 |
MS.gene058292 | MS.gene065593 | 0.831175 | 1.94E-55 | -1.69E-46 |
MS.gene058330 | MS.gene065593 | 0.81865 | 1.75E-52 | -1.69E-46 |
MS.gene058429 | MS.gene065593 | 0.805854 | 1.09E-49 | -1.69E-46 |
MS.gene058631 | MS.gene065593 | 0.802678 | 5.01E-49 | -1.69E-46 |
MS.gene058638 | MS.gene065593 | 0.903767 | 2.47E-79 | -1.69E-46 |
MS.gene058639 | MS.gene065593 | 0.89676 | 2.71E-76 | -1.69E-46 |
MS.gene058647 | MS.gene065593 | 0.835185 | 1.94E-56 | -1.69E-46 |
MS.gene058649 | MS.gene065593 | 0.839985 | 1.14E-57 | -1.69E-46 |
MS.gene058681 | MS.gene065593 | 0.80438 | 2.22E-49 | -1.69E-46 |
MS.gene058758 | MS.gene065593 | 0.872542 | 2.94E-67 | -1.69E-46 |
MS.gene058852 | MS.gene065593 | 0.804655 | 1.95E-49 | -1.69E-46 |
MS.gene058919 | MS.gene065593 | 0.823208 | 1.57E-53 | -1.69E-46 |
MS.gene059007 | MS.gene065593 | 0.86294 | 3.55E-64 | -1.69E-46 |
MS.gene059144 | MS.gene065593 | 0.80227 | 6.07E-49 | -1.69E-46 |
MS.gene059170 | MS.gene065593 | 0.854847 | 9.37E-62 | -1.69E-46 |
MS.gene059171 | MS.gene065593 | 0.837764 | 4.29E-57 | -1.69E-46 |
MS.gene059439 | MS.gene065593 | 0.8314 | 1.71E-55 | -1.69E-46 |
MS.gene059713 | MS.gene065593 | 0.828665 | 7.92E-55 | -1.69E-46 |
MS.gene059725 | MS.gene065593 | 0.827463 | 1.54E-54 | -1.69E-46 |
MS.gene059965 | MS.gene065593 | 0.839282 | 1.74E-57 | -1.69E-46 |
MS.gene06010 | MS.gene065593 | 0.802571 | 5.27E-49 | -1.69E-46 |
MS.gene060296 | MS.gene065593 | 0.817331 | 3.49E-52 | -1.69E-46 |
MS.gene060380 | MS.gene065593 | 0.847093 | 1.44E-59 | -1.69E-46 |
MS.gene060400 | MS.gene065593 | 0.855742 | 5.14E-62 | -1.69E-46 |
MS.gene060520 | MS.gene065593 | 0.807477 | 4.96E-50 | -1.69E-46 |
MS.gene06052 | MS.gene065593 | 0.827743 | 1.32E-54 | -1.69E-46 |
MS.gene060563 | MS.gene065593 | 0.863685 | 2.09E-64 | -1.69E-46 |
MS.gene060637 | MS.gene065593 | 0.839216 | 1.81E-57 | -1.69E-46 |
MS.gene060777 | MS.gene065593 | 0.803107 | 4.08E-49 | -1.69E-46 |
MS.gene060932 | MS.gene065593 | 0.829199 | 5.88E-55 | -1.69E-46 |
MS.gene060933 | MS.gene065593 | 0.861355 | 1.09E-63 | -1.69E-46 |
MS.gene060937 | MS.gene065593 | 0.816623 | 5.03E-52 | -1.69E-46 |
MS.gene061006 | MS.gene065593 | 0.877163 | 7.83E-69 | -1.69E-46 |
MS.gene061100 | MS.gene065593 | 0.851904 | 6.55E-61 | -1.69E-46 |
MS.gene06121 | MS.gene065593 | 0.803683 | 3.10E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065593.t1 | MTR_5g020140 | 87.551 | 980 | 41 | 4 | 1 | 980 | 1 | 899 | 0.0 | 1706 |
MS.gene065593.t1 | MTR_8g077680 | 74.899 | 992 | 234 | 6 | 1 | 979 | 1 | 990 | 0.0 | 1513 |
MS.gene065593.t1 | MTR_5g020140 | 98.229 | 734 | 13 | 0 | 247 | 980 | 16 | 749 | 0.0 | 1476 |
MS.gene065593.t1 | MTR_8g072800 | 96.491 | 57 | 2 | 0 | 522 | 578 | 34 | 90 | 8.44e-29 | 112 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065593.t1 | AT4G36630 | 69.530 | 1001 | 283 | 11 | 1 | 980 | 1 | 1000 | 0.0 | 1403 |
MS.gene065593.t1 | AT4G36630 | 68.958 | 902 | 258 | 11 | 1 | 881 | 1 | 901 | 0.0 | 1250 |
Find 201 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTCCCTCGGTAAAAGTTTA+AGG | 0.125485 | 5.3:-11533526 | None:intergenic |
ACTTAAATGCTCAACAAAAT+TGG | 0.163182 | 5.3:+11532718 | MS.gene065593:CDS |
TTCGATCTTGCCGTTGAAAT+TGG | 0.169757 | 5.3:-11520959 | None:intergenic |
CAGGATTTGCAATCATTTCT+TGG | 0.207715 | 5.3:+11533719 | MS.gene065593:intron |
GGTAATATTTCGGTTGGTTC+TGG | 0.234591 | 5.3:+11530777 | MS.gene065593:CDS |
TTCTATTCAAGGTCTCTTTC+CGG | 0.249789 | 5.3:+11522677 | MS.gene065593:CDS |
CTCCAAGCATTGCTTCTTAC+TGG | 0.273542 | 5.3:+11530837 | MS.gene065593:CDS |
CAATATGATAATGCCAATTC+TGG | 0.288745 | 5.3:-11533125 | None:intergenic |
GTCAGGTGTTTCAGATGATA+TGG | 0.290151 | 5.3:+11530193 | MS.gene065593:CDS |
CCGTCGGGAGAGCTGCTTCT+TGG | 0.296209 | 5.3:+11522195 | MS.gene065593:CDS |
TGAGAATTCCAGAACAAGTA+TGG | 0.303616 | 5.3:-11532240 | None:intergenic |
TCTCTGTGCCGAAAGAAAAT+AGG | 0.306759 | 5.3:+11534135 | MS.gene065593:CDS |
ATTGTCCAACTAACTGCTTC+TGG | 0.310438 | 5.3:+11522934 | MS.gene065593:CDS |
ACCGAGGGAGACTAAGTTAC+AGG | 0.317122 | 5.3:+11533538 | MS.gene065593:CDS |
GGGGTCTTTGTGGATCAAAA+TGG | 0.325153 | 5.3:+11522359 | MS.gene065593:CDS |
TTTGTGGAGGTGAAAGAGTT+TGG | 0.330078 | 5.3:+11522021 | MS.gene065593:CDS |
AAGTACTTAGCTTGCATGTT+TGG | 0.331692 | 5.3:-11532362 | None:intergenic |
ATATATGTTTGGGGATTAGA+AGG | 0.342950 | 5.3:+11522085 | MS.gene065593:CDS |
CTTCTCGAGTGTGTAAGATT+TGG | 0.345106 | 5.3:-11521073 | None:intergenic |
AACGAATCATAATATGCTTA+TGG | 0.346723 | 5.3:+11530259 | MS.gene065593:CDS |
AGTTGTCTTTGGAAGGATAA+TGG | 0.347247 | 5.3:-11530108 | None:intergenic |
TGATCGGAGAATTCAGTTTC+CGG | 0.348640 | 5.3:-11521048 | None:intergenic |
CGCAGGTGGGATAGAATAAA+TGG | 0.349821 | 5.3:+11533494 | MS.gene065593:CDS |
AATAGATTTGCATAAGCAAT+AGG | 0.353003 | 5.3:-11533205 | None:intergenic |
CAGTTTCCGGCGAGTAGATT+CGG | 0.354495 | 5.3:-11521035 | None:intergenic |
AGGATTTGCAATCATTTCTT+GGG | 0.359164 | 5.3:+11533720 | MS.gene065593:intron |
AAGAGGGATCAATTCATATA+AGG | 0.360242 | 5.3:+11523025 | MS.gene065593:CDS |
GTAGCTTCATGTTCCAGAAT+TGG | 0.360731 | 5.3:+11533112 | MS.gene065593:intron |
GTTTCATAGATTACCAAGTT+TGG | 0.361774 | 5.3:+11521185 | MS.gene065593:CDS |
GACGGATCCCATACTTGTTC+TGG | 0.362031 | 5.3:+11532232 | MS.gene065593:CDS |
ACCGCTATCGTTTCCAAACT+TGG | 0.362738 | 5.3:-11521198 | None:intergenic |
GGTCTCTTTCCGGTTCCTCT+TGG | 0.363301 | 5.3:+11522687 | MS.gene065593:CDS |
TGCATTCTCGTCGGTTGGTA+AGG | 0.363589 | 5.3:-11530219 | None:intergenic |
TCATGAACAATAGTTGTCTT+TGG | 0.365434 | 5.3:-11530119 | None:intergenic |
TGGAAATATACCAGCTGATA+TGG | 0.371949 | 5.3:+11532313 | MS.gene065593:CDS |
ATGAATGAGAATGCCATATC+TGG | 0.374201 | 5.3:+11532401 | MS.gene065593:CDS |
AAATTATTGTCGGCTTTAGA+AGG | 0.375333 | 5.3:+11532771 | MS.gene065593:CDS |
GACCAACAAATCCTGCCTTC+AGG | 0.381825 | 5.3:-11522392 | None:intergenic |
CCAGAGAAGTTGGACATTGA+TGG | 0.384030 | 5.3:+11530143 | MS.gene065593:CDS |
TCGATCTTGCCGTTGAAATT+GGG | 0.395645 | 5.3:-11520958 | None:intergenic |
TAACTCCGTGATACTTGCTT+TGG | 0.398361 | 5.3:+11522650 | MS.gene065593:CDS |
GGAGAACATTGGGGTCTTTG+TGG | 0.400346 | 5.3:+11522349 | MS.gene065593:intron |
CTTAAATGCTCAACAAAATT+GGG | 0.401030 | 5.3:+11532719 | MS.gene065593:CDS |
TCAGGGGCGTGGTAATATTT+CGG | 0.401268 | 5.3:+11530767 | MS.gene065593:intron |
TGACGAAACTCTGGAAAGAT+AGG | 0.401467 | 5.3:-11530174 | None:intergenic |
CTCTGTGCCGAAAGAAAATA+GGG | 0.407080 | 5.3:+11534136 | MS.gene065593:CDS |
CCATCAATGTCCAACTTCTC+TGG | 0.407872 | 5.3:-11530143 | None:intergenic |
GCGACAGAGCGAAAACCTTC+AGG | 0.409251 | 5.3:+11533799 | MS.gene065593:CDS |
TTCCTGAAGGCAGGATTTGT+TGG | 0.411916 | 5.3:+11522390 | MS.gene065593:CDS |
AACACTTCCATTGAAACAAC+AGG | 0.413460 | 5.3:-11521120 | None:intergenic |
CGGTTATCACAAAAGCTAAA+GGG | 0.415407 | 5.3:+11521217 | MS.gene065593:CDS |
ATTGTCTCTGTATGTTCATA+AGG | 0.416059 | 5.3:+11532899 | MS.gene065593:CDS |
AAGCTTGCTGTGGTCTTTCG+AGG | 0.416092 | 5.3:-11533233 | None:intergenic |
TTTCGGTTGGTTCTGGAGCT+CGG | 0.416243 | 5.3:+11530784 | MS.gene065593:CDS |
GCACGTAGACTTGAATCTTC+AGG | 0.417466 | 5.3:-11522997 | None:intergenic |
CTCTTACTCGGTTGCTCCGA+TGG | 0.419869 | 5.3:+11521006 | MS.gene065593:CDS |
ATAACTATGCATCCTACAAT+AGG | 0.421989 | 5.3:+11530375 | MS.gene065593:CDS |
CTCCCTCGGTAAAAGTTTAA+GGG | 0.423938 | 5.3:-11533525 | None:intergenic |
ATAGTTTGTATCAACGGATA+AGG | 0.424246 | 5.3:-11522591 | None:intergenic |
GAAGAAGTTCAAGAGCTTGC+CGG | 0.425673 | 5.3:-11530989 | None:intergenic |
GCTTTGGATAATTCTATTCA+AGG | 0.429881 | 5.3:+11522666 | MS.gene065593:CDS |
GTGTGGGGAGAATATATGTT+TGG | 0.431947 | 5.3:+11522074 | MS.gene065593:CDS |
AGACGTTTCAGCAGAGCCTC+TGG | 0.433778 | 5.3:-11532810 | None:intergenic |
GTCGGCTTTAGAAGGCATAT+CGG | 0.433838 | 5.3:+11532779 | MS.gene065593:CDS |
AAGAAAATTGCGGAGATTGA+AGG | 0.434241 | 5.3:+11533350 | MS.gene065593:CDS |
TGTGGGGAGAATATATGTTT+GGG | 0.438071 | 5.3:+11522075 | MS.gene065593:CDS |
TCCGGTTCCTCTTGGAGCCC+AGG | 0.438180 | 5.3:+11522695 | MS.gene065593:CDS |
ACCTGGGCTCCAAGAGGAAC+CGG | 0.441245 | 5.3:-11522696 | None:intergenic |
CTTCCTCAACTGAGACCCTT+TGG | 0.441954 | 5.3:-11534244 | None:intergenic |
ACCTATCTGACGTACTTGAT+TGG | 0.443552 | 5.3:+11532688 | MS.gene065593:CDS |
AGCTTTGCTGCCTAGATTCG+TGG | 0.448234 | 5.3:+11522457 | MS.gene065593:CDS |
CTCATGGACTTCACCATGTC+CGG | 0.448544 | 5.3:-11522048 | None:intergenic |
GGCATTATCATATTGTGATC+GGG | 0.449096 | 5.3:+11533133 | MS.gene065593:CDS |
TGCACGAGAGTGCTCCCGTT+GGG | 0.451076 | 5.3:-11534180 | None:intergenic |
GGGTCTTTGTGGATCAAAAT+GGG | 0.452687 | 5.3:+11522360 | MS.gene065593:CDS |
TGAAACACCTGACGAAACTC+TGG | 0.452802 | 5.3:-11530183 | None:intergenic |
TGAAGAGCGTGCAATATTGT+TGG | 0.454529 | 5.3:+11532851 | MS.gene065593:CDS |
AGTTTCCAGAAGCAGTTAGT+TGG | 0.458669 | 5.3:-11522939 | None:intergenic |
TGGTGCACTACCTCTAGAAA+TGG | 0.459530 | 5.3:-11533297 | None:intergenic |
AGCAGCTCTCCCGACGGAAT+AGG | 0.460605 | 5.3:-11522189 | None:intergenic |
TTCGGTTGGTTCTGGAGCTC+GGG | 0.460897 | 5.3:+11530785 | MS.gene065593:CDS |
TGGTTCTGGAGCTCGGGAGA+TGG | 0.465680 | 5.3:+11530791 | MS.gene065593:CDS |
GAAGAGCGTGCAATATTGTT+GGG | 0.469594 | 5.3:+11532852 | MS.gene065593:CDS |
TGTTCATGAGCCAGAGAAGT+TGG | 0.471501 | 5.3:+11530133 | MS.gene065593:CDS |
CAGAGAAGTTGGACATTGAT+GGG | 0.472173 | 5.3:+11530144 | MS.gene065593:CDS |
ATTGTGGATGTAGGTGGTAG+GGG | 0.472436 | 5.3:+11521997 | MS.gene065593:intron |
GCATTCTCGTCGGTTGGTAA+GGG | 0.485407 | 5.3:-11530218 | None:intergenic |
GCAGCTTTAGAAATACTAAG+AGG | 0.493048 | 5.3:+11530870 | MS.gene065593:CDS |
TCTTGAACTTCTTCACAAGT+TGG | 0.493830 | 5.3:+11530998 | MS.gene065593:CDS |
AAACATGCAAGCTAAGTACT+TGG | 0.495926 | 5.3:+11532364 | MS.gene065593:CDS |
TATCTTTCCAGAGTTTCGTC+AGG | 0.497269 | 5.3:+11530176 | MS.gene065593:CDS |
TCGGCTTTAGAAGGCATATC+GGG | 0.497897 | 5.3:+11532780 | MS.gene065593:CDS |
TGGCATTATCATATTGTGAT+CGG | 0.499192 | 5.3:+11533132 | MS.gene065593:CDS |
GCGGTTATCACAAAAGCTAA+AGG | 0.499252 | 5.3:+11521216 | MS.gene065593:CDS |
GGCAGCAAAGCTATAGCATA+CGG | 0.502952 | 5.3:-11522446 | None:intergenic |
AAGTCTACGTGCTGCAAAAG+AGG | 0.503094 | 5.3:+11523008 | MS.gene065593:CDS |
TGAACTTCTTCACAAGTTGG+TGG | 0.503711 | 5.3:+11531001 | MS.gene065593:CDS |
GCCAATCAAGTACGTCAGAT+AGG | 0.507056 | 5.3:-11532689 | None:intergenic |
TCGGTTACCTCCACGAATCT+AGG | 0.507909 | 5.3:-11522467 | None:intergenic |
TGGCAATCTGCAAAATGAAA+TGG | 0.508855 | 5.3:+11532421 | MS.gene065593:CDS |
GGGCGTGGTAATATTTCGGT+TGG | 0.509595 | 5.3:+11530771 | MS.gene065593:CDS |
GTATCACGGAGTTACTGCTT+TGG | 0.509901 | 5.3:-11522641 | None:intergenic |
TCCTTGATCTGTTGAGCCGC+AGG | 0.510060 | 5.3:+11533477 | MS.gene065593:CDS |
GAAGAAGCCTGTTGTTTCAA+TGG | 0.510917 | 5.3:+11521113 | MS.gene065593:CDS |
GGATAGAATAAATGGAGCTC+AGG | 0.513311 | 5.3:+11533502 | MS.gene065593:CDS |
GGAAACTTATTCCTGAAGGC+AGG | 0.513773 | 5.3:+11522381 | MS.gene065593:CDS |
ACCTTTGTGTAATTTCAGAC+TGG | 0.516556 | 5.3:-11531040 | None:intergenic |
TGTGAAGAAATACTTCGAAA+AGG | 0.521444 | 5.3:+11530918 | MS.gene065593:CDS |
AATTGTGGATGTAGGTGGTA+GGG | 0.522536 | 5.3:+11521996 | MS.gene065593:intron |
TTGTTGGTCAGAGGCACCCT+TGG | 0.525914 | 5.3:+11522406 | MS.gene065593:CDS |
GAACAATAGTTGTCTTTGGA+AGG | 0.526784 | 5.3:-11530115 | None:intergenic |
ATTGAGAAGGCTACTGCGGA+GGG | 0.528197 | 5.3:+11530320 | MS.gene065593:CDS |
AAATGAAAGCAGTGACCAAA+GGG | 0.529020 | 5.3:+11534229 | MS.gene065593:CDS |
TTAGTAGTGCCTATTCCGTC+GGG | 0.529634 | 5.3:+11522180 | MS.gene065593:CDS |
ATTCTCCCCACACCAACTCA+TGG | 0.529806 | 5.3:-11522064 | None:intergenic |
AGATACTCAACAATGTCCTC+AGG | 0.530213 | 5.3:-11531068 | None:intergenic |
ACCTGTAACTTAGTCTCCCT+CGG | 0.533888 | 5.3:-11533539 | None:intergenic |
TTTAGTAGTGCCTATTCCGT+CGG | 0.534864 | 5.3:+11522179 | MS.gene065593:CDS |
TTCTGAATCACGACTTCCAA+GGG | 0.535554 | 5.3:-11522422 | None:intergenic |
TGTGTAAGATTTGGAATGAT+CGG | 0.538565 | 5.3:-11521064 | None:intergenic |
GGTGAAAGAGTTTGGTGTAC+CGG | 0.538784 | 5.3:+11522029 | MS.gene065593:CDS |
TGTTGTTTCAATGGAAGTGT+TGG | 0.539807 | 5.3:+11521122 | MS.gene065593:CDS |
TTGATCTGTTGAGCCGCAGG+TGG | 0.540467 | 5.3:+11533480 | MS.gene065593:CDS |
AATTATTGGTGTCAGGGGCG+TGG | 0.546346 | 5.3:+11530756 | MS.gene065593:intron |
GACGGAATAGGCACTACTAA+AGG | 0.548113 | 5.3:-11522177 | None:intergenic |
GTCCAGTAAGAAGCAATGCT+TGG | 0.549261 | 5.3:-11530839 | None:intergenic |
TATGAGTTCACCATATCAGC+TGG | 0.551024 | 5.3:-11532323 | None:intergenic |
AGTGCTGCATTCTCGTCGGT+TGG | 0.551147 | 5.3:-11530224 | None:intergenic |
TTGTGGATGTAGGTGGTAGG+GGG | 0.553180 | 5.3:+11521998 | MS.gene065593:intron |
TGGGAGCTATGAGGAGGCTG+TGG | 0.553983 | 5.3:+11530031 | MS.gene065593:CDS |
GTCTTTGGAAGGATAATGGA+TGG | 0.554431 | 5.3:-11530104 | None:intergenic |
ACCTGCGGCTCAACAGATCA+AGG | 0.554797 | 5.3:-11533478 | None:intergenic |
TCTTGATCACTGAACAGTTA+CGG | 0.555310 | 5.3:-11533772 | None:intergenic |
ACCATCACTCTTGCTACTGT+CGG | 0.559526 | 5.3:-11533405 | None:intergenic |
TCAGAGGAAAGCAGTTGTGA+AGG | 0.560470 | 5.3:+11534092 | MS.gene065593:CDS |
TTCAAGTGCTGCATTCTCGT+CGG | 0.560647 | 5.3:-11530228 | None:intergenic |
AGAACAATAGTTTGTATCAA+CGG | 0.565871 | 5.3:-11522597 | None:intergenic |
TTTGCGAGACAAAAGCGTGT+TGG | 0.569829 | 5.3:+11521282 | MS.gene065593:CDS |
AAATTGTGGATGTAGGTGGT+AGG | 0.570289 | 5.3:+11521995 | MS.gene065593:intron |
TGACCAAAGGGTCTCAGTTG+AGG | 0.573404 | 5.3:+11534241 | MS.gene065593:CDS |
CTTCTGAATCACGACTTCCA+AGG | 0.573584 | 5.3:-11522423 | None:intergenic |
GGGAGAGCTGCTTCTTGGAA+AGG | 0.574605 | 5.3:+11522200 | MS.gene065593:CDS |
TCTCATTTCAAAGCTTGCTG+TGG | 0.578557 | 5.3:-11533243 | None:intergenic |
AGTCTACGTGCTGCAAAAGA+GGG | 0.579275 | 5.3:+11523009 | MS.gene065593:CDS |
AAAAGCTCAATAGTTTGGGA+TGG | 0.580220 | 5.3:-11532284 | None:intergenic |
TTCAAATGGTGCTTTGTCCG+AGG | 0.583371 | 5.3:+11522128 | MS.gene065593:CDS |
GAGAATTCCAGAACAAGTAT+GGG | 0.584605 | 5.3:-11532239 | None:intergenic |
AATGGGAAACTTATTCCTGA+AGG | 0.585662 | 5.3:+11522377 | MS.gene065593:CDS |
GATGCAGCCGCTATGTGAGA+CGG | 0.586279 | 5.3:+11532214 | MS.gene065593:intron |
AAAATGAAAGCAGTGACCAA+AGG | 0.587095 | 5.3:+11534228 | MS.gene065593:CDS |
TATATGTTTGGGGATTAGAA+GGG | 0.589030 | 5.3:+11522086 | MS.gene065593:CDS |
TACGGTTCAAAACTCTTACT+CGG | 0.592902 | 5.3:+11520994 | MS.gene065593:CDS |
ATCTCTCCGAATCTACTCGC+CGG | 0.594958 | 5.3:+11521029 | MS.gene065593:CDS |
CAGAGAACACATGCTATCGC+TGG | 0.594960 | 5.3:-11534118 | None:intergenic |
AGGCAGGATTTGTTGGTCAG+AGG | 0.601301 | 5.3:+11522397 | MS.gene065593:CDS |
GTGAAGTCCATGAGTTGGTG+TGG | 0.601993 | 5.3:+11522057 | MS.gene065593:CDS |
GAACTCGTTCCCAATTTCAA+CGG | 0.603272 | 5.3:+11520949 | MS.gene065593:CDS |
ACAAGTGCAAGTCATTGCAC+CGG | 0.604273 | 5.3:+11530970 | MS.gene065593:CDS |
AGAAAACTTATACCCCAACT+AGG | 0.606288 | 5.3:+11532745 | MS.gene065593:CDS |
TGATCTGTTGAGCCGCAGGT+GGG | 0.606981 | 5.3:+11533481 | MS.gene065593:CDS |
TATTGAGAAGGCTACTGCGG+AGG | 0.609202 | 5.3:+11530319 | MS.gene065593:CDS |
CATTTATTCTATCCCACCTG+CGG | 0.610718 | 5.3:-11533493 | None:intergenic |
CTCTACTATCATGCTTGATG+AGG | 0.611072 | 5.3:+11533454 | MS.gene065593:CDS |
TGAAGTCCATGAGTTGGTGT+GGG | 0.613486 | 5.3:+11522058 | MS.gene065593:CDS |
TGAAAATGGGAGCTATGAGG+AGG | 0.616857 | 5.3:+11530025 | MS.gene065593:CDS |
GCACGAGAGTGCTCCCGTTG+GGG | 0.617314 | 5.3:-11534179 | None:intergenic |
ACCAAGTTTGGAAACGATAG+CGG | 0.617363 | 5.3:+11521197 | MS.gene065593:CDS |
TGCGGAGATTGAAGGTGCAG+AGG | 0.620011 | 5.3:+11533358 | MS.gene065593:CDS |
AGAGTTTGGTGTACCGGACA+TGG | 0.623876 | 5.3:+11522035 | MS.gene065593:CDS |
TGCTTCTGGAAACTTTGAAG+AGG | 0.624824 | 5.3:+11522948 | MS.gene065593:CDS |
GAGACAATGCCAGTTCATGT+TGG | 0.626423 | 5.3:-11532884 | None:intergenic |
AAATATTTGCAGAAGAAGAG+AGG | 0.627160 | 5.3:+11530290 | MS.gene065593:CDS |
AAGCAGCTTGCACAATGACA+AGG | 0.629811 | 5.3:-11522971 | None:intergenic |
CAAAATACAGCCATTTCTAG+AGG | 0.630041 | 5.3:+11533287 | MS.gene065593:CDS |
GGTTATCACAAAAGCTAAAG+GGG | 0.632335 | 5.3:+11521218 | MS.gene065593:CDS |
ATCGAATCCATCGAATCCTA+CGG | 0.634247 | 5.3:+11520976 | MS.gene065593:CDS |
ATTATCCAAAGCAAGTATCA+CGG | 0.634296 | 5.3:-11522655 | None:intergenic |
GTGCACGAGAGTGCTCCCGT+TGG | 0.634412 | 5.3:-11534181 | None:intergenic |
CCAAGAAGCAGCTCTCCCGA+CGG | 0.635711 | 5.3:-11522195 | None:intergenic |
GGACATTGTTGAGTATCTCA+AGG | 0.638437 | 5.3:+11531073 | MS.gene065593:CDS |
GTAGATTCGGAGAGATCCAT+CGG | 0.640265 | 5.3:-11521022 | None:intergenic |
TCTTCATATAAAGCATCTTG+AGG | 0.647366 | 5.3:-11532834 | None:intergenic |
AAGATGAACTGTATAGTCAG+AGG | 0.648837 | 5.3:+11534076 | MS.gene065593:CDS |
ACCGACAGTAGCAAGAGTGA+TGG | 0.649366 | 5.3:+11533404 | MS.gene065593:CDS |
TACACAAAGGTTCAAGCCTG+AGG | 0.651020 | 5.3:+11531052 | MS.gene065593:CDS |
ACATGGTGAAGTCCATGAGT+TGG | 0.651327 | 5.3:+11522052 | MS.gene065593:CDS |
GTGGGGAGAATATATGTTTG+GGG | 0.653335 | 5.3:+11522076 | MS.gene065593:CDS |
TACAGTACCTGGGCTCCAAG+AGG | 0.653562 | 5.3:-11522702 | None:intergenic |
CCGAGGATCAAAGAAAATTG+CGG | 0.658383 | 5.3:+11533340 | MS.gene065593:CDS |
TGATGCGGATGAATTTAATG+AGG | 0.663812 | 5.3:+11533427 | MS.gene065593:CDS |
CGTAGACTTGAATCTTCAGG+TGG | 0.664174 | 5.3:-11522994 | None:intergenic |
AGAGAAGTTGGACATTGATG+GGG | 0.668723 | 5.3:+11530145 | MS.gene065593:CDS |
TGGATAAAGAGAAAGCACAT+AGG | 0.673745 | 5.3:-11530084 | None:intergenic |
GATGCGGATGAATTTAATGA+GGG | 0.675828 | 5.3:+11533428 | MS.gene065593:CDS |
TAGCAAGAGTGATGGTGATG+CGG | 0.679498 | 5.3:+11533412 | MS.gene065593:CDS |
GAAGTCCATGAGTTGGTGTG+GGG | 0.692506 | 5.3:+11522059 | MS.gene065593:CDS |
GCCAGTCTGAAATTACACAA+AGG | 0.698565 | 5.3:+11531039 | MS.gene065593:CDS |
TTTGCTGCCTAGATTCGTGG+AGG | 0.700668 | 5.3:+11522460 | MS.gene065593:CDS |
ATGGGATCCGTCTCACATAG+CGG | 0.707790 | 5.3:-11532221 | None:intergenic |
GGAATAGGCACTACTAAAGG+CGG | 0.715805 | 5.3:-11522174 | None:intergenic |
CATATCGGGATACAATCCAG+AGG | 0.742394 | 5.3:+11532794 | MS.gene065593:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 11520922 | 11534272 | 11520922 | ID=MS.gene065593 |
chr5.3 | mRNA | 11520922 | 11534272 | 11520922 | ID=MS.gene065593.t1;Parent=MS.gene065593 |
chr5.3 | exon | 11520922 | 11521321 | 11520922 | ID=MS.gene065593.t1.exon1;Parent=MS.gene065593.t1 |
chr5.3 | CDS | 11520922 | 11521321 | 11520922 | ID=cds.MS.gene065593.t1;Parent=MS.gene065593.t1 |
chr5.3 | exon | 11522010 | 11522221 | 11522010 | ID=MS.gene065593.t1.exon2;Parent=MS.gene065593.t1 |
chr5.3 | CDS | 11522010 | 11522221 | 11522010 | ID=cds.MS.gene065593.t1;Parent=MS.gene065593.t1 |
chr5.3 | exon | 11522350 | 11522481 | 11522350 | ID=MS.gene065593.t1.exon3;Parent=MS.gene065593.t1 |
chr5.3 | CDS | 11522350 | 11522481 | 11522350 | ID=cds.MS.gene065593.t1;Parent=MS.gene065593.t1 |
chr5.3 | exon | 11522573 | 11522716 | 11522573 | ID=MS.gene065593.t1.exon4;Parent=MS.gene065593.t1 |
chr5.3 | CDS | 11522573 | 11522716 | 11522573 | ID=cds.MS.gene065593.t1;Parent=MS.gene065593.t1 |
chr5.3 | exon | 11522934 | 11523046 | 11522934 | ID=MS.gene065593.t1.exon5;Parent=MS.gene065593.t1 |
chr5.3 | CDS | 11522934 | 11523046 | 11522934 | ID=cds.MS.gene065593.t1;Parent=MS.gene065593.t1 |
chr5.3 | exon | 11530007 | 11530415 | 11530007 | ID=MS.gene065593.t1.exon6;Parent=MS.gene065593.t1 |
chr5.3 | CDS | 11530007 | 11530415 | 11530007 | ID=cds.MS.gene065593.t1;Parent=MS.gene065593.t1 |
chr5.3 | exon | 11530771 | 11531094 | 11530771 | ID=MS.gene065593.t1.exon7;Parent=MS.gene065593.t1 |
chr5.3 | CDS | 11530771 | 11531094 | 11530771 | ID=cds.MS.gene065593.t1;Parent=MS.gene065593.t1 |
chr5.3 | exon | 11532221 | 11532442 | 11532221 | ID=MS.gene065593.t1.exon8;Parent=MS.gene065593.t1 |
chr5.3 | CDS | 11532221 | 11532442 | 11532221 | ID=cds.MS.gene065593.t1;Parent=MS.gene065593.t1 |
chr5.3 | exon | 11532678 | 11532920 | 11532678 | ID=MS.gene065593.t1.exon9;Parent=MS.gene065593.t1 |
chr5.3 | CDS | 11532678 | 11532920 | 11532678 | ID=cds.MS.gene065593.t1;Parent=MS.gene065593.t1 |
chr5.3 | exon | 11533116 | 11533559 | 11533116 | ID=MS.gene065593.t1.exon10;Parent=MS.gene065593.t1 |
chr5.3 | CDS | 11533116 | 11533559 | 11533116 | ID=cds.MS.gene065593.t1;Parent=MS.gene065593.t1 |
chr5.3 | exon | 11533722 | 11533820 | 11533722 | ID=MS.gene065593.t1.exon11;Parent=MS.gene065593.t1 |
chr5.3 | CDS | 11533722 | 11533820 | 11533722 | ID=cds.MS.gene065593.t1;Parent=MS.gene065593.t1 |
chr5.3 | exon | 11534072 | 11534272 | 11534072 | ID=MS.gene065593.t1.exon12;Parent=MS.gene065593.t1 |
chr5.3 | CDS | 11534072 | 11534272 | 11534072 | ID=cds.MS.gene065593.t1;Parent=MS.gene065593.t1 |
Gene Sequence |
Protein sequence |