Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058643.t1 | RHN46985.1 | 96.2 | 186 | 7 | 0 | 1 | 186 | 1 | 186 | 2.80E-85 | 324.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058643.t1 | Q2HIJ8 | 50.0 | 186 | 92 | 1 | 1 | 186 | 1 | 185 | 6.4e-46 | 185.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058643.t1 | A0A396H731 | 96.2 | 186 | 7 | 0 | 1 | 186 | 1 | 186 | 2.0e-85 | 324.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056069 | MS.gene058643 | 0.817275 | 3.59E-52 | -1.69E-46 |
| MS.gene058643 | MS.gene44135 | 0.825025 | 5.87E-54 | -1.69E-46 |
| MS.gene058643 | MS.gene70989 | 0.827373 | 1.62E-54 | -1.69E-46 |
| MS.gene058643 | MS.gene84981 | 0.805832 | 1.10E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058643.t1 | MTR_8g030510 | 69.355 | 186 | 57 | 0 | 1 | 186 | 1 | 186 | 4.22e-92 | 267 |
| MS.gene058643.t1 | MTR_8g098665 | 39.216 | 204 | 104 | 4 | 1 | 186 | 1 | 202 | 5.93e-40 | 135 |
| MS.gene058643.t1 | MTR_6g015980 | 35.754 | 179 | 91 | 3 | 28 | 186 | 49 | 223 | 1.14e-27 | 104 |
| MS.gene058643.t1 | MTR_7g016840 | 35.500 | 200 | 93 | 6 | 13 | 186 | 34 | 223 | 6.54e-26 | 99.8 |
| MS.gene058643.t1 | MTR_5g046970 | 40.000 | 95 | 52 | 2 | 93 | 182 | 32 | 126 | 1.38e-14 | 68.2 |
| MS.gene058643.t1 | MTR_2g087820 | 54.167 | 48 | 22 | 0 | 137 | 184 | 34 | 81 | 9.33e-13 | 65.9 |
| MS.gene058643.t1 | MTR_2g087820 | 54.167 | 48 | 22 | 0 | 137 | 184 | 34 | 81 | 9.96e-13 | 65.9 |
| MS.gene058643.t1 | MTR_7g106770 | 54.348 | 46 | 21 | 0 | 137 | 182 | 31 | 76 | 7.28e-12 | 62.8 |
| MS.gene058643.t1 | MTR_2g022680 | 52.083 | 48 | 23 | 0 | 137 | 184 | 35 | 82 | 2.11e-11 | 62.0 |
| MS.gene058643.t1 | MTR_2g022680 | 52.083 | 48 | 23 | 0 | 137 | 184 | 35 | 82 | 2.38e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058643.t1 | AT4G00335 | 57.527 | 186 | 78 | 1 | 1 | 186 | 1 | 185 | 4.42e-73 | 219 |
| MS.gene058643.t1 | AT4G00335 | 57.527 | 186 | 78 | 1 | 1 | 186 | 1 | 185 | 4.42e-73 | 219 |
| MS.gene058643.t1 | AT4G00335 | 57.527 | 186 | 78 | 1 | 1 | 186 | 1 | 185 | 4.42e-73 | 219 |
| MS.gene058643.t1 | AT5G41350 | 41.063 | 207 | 101 | 6 | 1 | 186 | 1 | 207 | 5.75e-43 | 143 |
| MS.gene058643.t1 | AT5G41350 | 41.063 | 207 | 101 | 6 | 1 | 186 | 1 | 207 | 5.75e-43 | 143 |
| MS.gene058643.t1 | AT5G41350 | 41.063 | 207 | 101 | 6 | 1 | 186 | 26 | 232 | 1.01e-42 | 143 |
| MS.gene058643.t1 | AT5G38895 | 37.333 | 150 | 76 | 5 | 52 | 186 | 69 | 215 | 1.06e-22 | 90.9 |
| MS.gene058643.t1 | AT3G02290 | 35.583 | 163 | 65 | 5 | 56 | 186 | 73 | 227 | 1.12e-22 | 91.3 |
| MS.gene058643.t1 | AT3G02290 | 35.583 | 163 | 65 | 5 | 56 | 186 | 73 | 227 | 1.12e-22 | 91.3 |
| MS.gene058643.t1 | AT3G02290 | 35.583 | 163 | 65 | 5 | 56 | 186 | 73 | 227 | 1.12e-22 | 91.3 |
| MS.gene058643.t1 | AT3G02290 | 35.583 | 163 | 65 | 5 | 56 | 186 | 73 | 227 | 1.12e-22 | 91.3 |
| MS.gene058643.t1 | AT3G02290 | 35.583 | 163 | 65 | 5 | 56 | 186 | 73 | 227 | 1.12e-22 | 91.3 |
| MS.gene058643.t1 | AT5G38895 | 37.333 | 150 | 76 | 5 | 52 | 186 | 144 | 290 | 3.33e-22 | 91.3 |
| MS.gene058643.t1 | AT5G38895 | 37.333 | 150 | 76 | 5 | 52 | 186 | 183 | 329 | 5.62e-22 | 91.3 |
| MS.gene058643.t1 | AT3G02290 | 34.969 | 163 | 66 | 5 | 56 | 186 | 73 | 227 | 6.05e-22 | 89.4 |
| MS.gene058643.t1 | AT5G15790 | 33.511 | 188 | 89 | 3 | 27 | 186 | 49 | 228 | 1.08e-21 | 88.6 |
| MS.gene058643.t1 | AT5G15790 | 33.511 | 188 | 89 | 3 | 27 | 186 | 49 | 228 | 1.08e-21 | 88.6 |
| MS.gene058643.t1 | AT5G15790 | 33.511 | 188 | 89 | 3 | 27 | 186 | 49 | 228 | 1.08e-21 | 88.6 |
| MS.gene058643.t1 | AT5G15790 | 33.511 | 188 | 89 | 3 | 27 | 186 | 49 | 228 | 1.08e-21 | 88.6 |
| MS.gene058643.t1 | AT5G15790 | 32.979 | 188 | 90 | 3 | 27 | 186 | 49 | 228 | 9.14e-21 | 87.0 |
| MS.gene058643.t1 | AT4G23450 | 67.308 | 52 | 17 | 0 | 135 | 186 | 99 | 150 | 2.26e-20 | 83.2 |
| MS.gene058643.t1 | AT4G23450 | 67.308 | 52 | 17 | 0 | 135 | 186 | 99 | 150 | 2.26e-20 | 83.2 |
| MS.gene058643.t1 | AT4G23450 | 67.308 | 52 | 17 | 0 | 135 | 186 | 99 | 150 | 2.26e-20 | 83.2 |
| MS.gene058643.t1 | AT4G23450 | 67.308 | 52 | 17 | 0 | 135 | 186 | 99 | 150 | 2.26e-20 | 83.2 |
| MS.gene058643.t1 | AT4G23450 | 67.308 | 52 | 17 | 0 | 135 | 186 | 154 | 205 | 3.75e-20 | 84.0 |
| MS.gene058643.t1 | AT4G23450 | 67.308 | 52 | 17 | 0 | 135 | 186 | 154 | 205 | 3.75e-20 | 84.0 |
| MS.gene058643.t1 | AT1G69085 | 44.737 | 76 | 40 | 1 | 113 | 186 | 31 | 106 | 3.54e-17 | 73.9 |
| MS.gene058643.t1 | AT5G22000 | 50.000 | 48 | 24 | 0 | 137 | 184 | 30 | 77 | 3.49e-11 | 61.2 |
| MS.gene058643.t1 | AT5G22000 | 50.000 | 48 | 24 | 0 | 137 | 184 | 30 | 77 | 3.62e-11 | 61.2 |
| MS.gene058643.t1 | AT5G22000 | 50.000 | 48 | 24 | 0 | 137 | 184 | 30 | 77 | 3.62e-11 | 61.2 |
| MS.gene058643.t1 | AT4G14220 | 46.000 | 50 | 27 | 0 | 137 | 186 | 43 | 92 | 4.32e-11 | 61.2 |
Find 40 sgRNAs with CRISPR-Local
Find 81 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCGATCTCTGCTGGATTTC+TGG | 0.071724 | 7.4:+28207748 | MS.gene058643:CDS |
| ACTGTACCTTCGAGGCAAAT+AGG | 0.360597 | 7.4:-28208049 | None:intergenic |
| TCTTTGCAAGACTCGGAATC+AGG | 0.371530 | 7.4:-28207863 | None:intergenic |
| CGAAGCAGTGGTAGCGTCAT+TGG | 0.377536 | 7.4:-28207729 | None:intergenic |
| TTTGATAGTTCTACCTTCCT+TGG | 0.379960 | 7.4:-28207980 | None:intergenic |
| GGAGGAGACCGGAATGTATC+AGG | 0.380787 | 7.4:-28207797 | None:intergenic |
| CTACTAACATAGTAATAAAC+TGG | 0.386112 | 7.4:-28207181 | None:intergenic |
| CTTCCTTATGACACTGTCTT+CGG | 0.402519 | 7.4:+28207827 | MS.gene058643:CDS |
| ATCTCTGCTGGATTTCTGGT+TGG | 0.413962 | 7.4:+28207752 | MS.gene058643:CDS |
| TATCAGGTATGGATGCTTCC+AGG | 0.417514 | 7.4:-28207781 | None:intergenic |
| CTGTACCTTCGAGGCAAATA+GGG | 0.426908 | 7.4:-28208048 | None:intergenic |
| ATTTCTGGTTGGCTTGAACC+TGG | 0.430575 | 7.4:+28207763 | MS.gene058643:CDS |
| AATATCATCGTGTGTTATTG+AGG | 0.438311 | 7.4:-28207912 | None:intergenic |
| ACCACTGCTTCGATCTCTGC+TGG | 0.451923 | 7.4:+28207740 | MS.gene058643:CDS |
| ACCTATCTTGCATTCTTGAG+TGG | 0.468479 | 7.4:+28208259 | MS.gene058643:CDS |
| TCCACTCAAGAATGCAAGAT+AGG | 0.479262 | 7.4:-28208260 | None:intergenic |
| GACTCCCGCTCTTCAAAAGT+TGG | 0.485903 | 7.4:-28207698 | None:intergenic |
| ATCTTGCATTCTTGAGTGGA+TGG | 0.491376 | 7.4:+28208263 | MS.gene058643:CDS |
| GTAGAACTATCAAAATCAAA+TGG | 0.495198 | 7.4:+28207989 | MS.gene058643:CDS |
| GTGTCATAAGGAAGAGGCAC+AGG | 0.502780 | 7.4:-28207818 | None:intergenic |
| CATCCATACCTGATACATTC+CGG | 0.503588 | 7.4:+28207789 | MS.gene058643:CDS |
| GGACATACCTGGTCACATAT+AGG | 0.506264 | 7.4:-28208303 | None:intergenic |
| CACAAGCAACTGTACCTTCG+AGG | 0.509741 | 7.4:-28208057 | None:intergenic |
| CCCGCTCTTCAAAAGTTGGC+GGG | 0.514822 | 7.4:-28207694 | None:intergenic |
| CCTCCGAAGACAGTGTCATA+AGG | 0.517025 | 7.4:-28207830 | None:intergenic |
| TCCCGCTCTTCAAAAGTTGG+CGG | 0.524615 | 7.4:-28207695 | None:intergenic |
| TGCTGCCCTATTTGCCTCGA+AGG | 0.526587 | 7.4:+28208043 | MS.gene058643:CDS |
| AGACCGGAATGTATCAGGTA+TGG | 0.527716 | 7.4:-28207792 | None:intergenic |
| AGTATTTGCAACAGAAGAAG+AGG | 0.529174 | 7.4:+28208018 | MS.gene058643:CDS |
| CTCTTGTCCTATATGTGACC+AGG | 0.534143 | 7.4:+28208296 | MS.gene058643:CDS |
| GAAGAGGCACAGGAGGAGAC+CGG | 0.549690 | 7.4:-28207808 | None:intergenic |
| TCCAGCAGAGATCGAAGCAG+TGG | 0.566172 | 7.4:-28207741 | None:intergenic |
| GCCAGAAAACATCATTTGCA+AGG | 0.567191 | 7.4:+28207154 | MS.gene058643:CDS |
| TGCATCTTTATCTCCAAGGA+AGG | 0.579543 | 7.4:+28207967 | MS.gene058643:CDS |
| CCTTATGACACTGTCTTCGG+AGG | 0.580401 | 7.4:+28207830 | MS.gene058643:CDS |
| AATCTGCATCTTTATCTCCA+AGG | 0.582568 | 7.4:+28207963 | MS.gene058643:CDS |
| TCATAAGGAAGAGGCACAGG+AGG | 0.585245 | 7.4:-28207815 | None:intergenic |
| AAGACAGTGTCATAAGGAAG+AGG | 0.585295 | 7.4:-28207824 | None:intergenic |
| AGCAGTGGTAGCGTCATTGG+AGG | 0.588345 | 7.4:-28207726 | None:intergenic |
| AAGAACTTCTGGAAAATGGG+AGG | 0.645337 | 7.4:+28207118 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTTTTAGATTATAGTTTA+AGG | + | chr7.4:28207393-28207412 | MS.gene058643:intron | 15.0% |
| !! | ATAGTTTAAGGATTATTGTT+TGG | + | chr7.4:28207405-28207424 | MS.gene058643:intron | 20.0% |
| !! | TCACATAAATACTTATGTAT+AGG | - | chr7.4:28207574-28207593 | None:intergenic | 20.0% |
| !!! | AAATGTCGATTTTTATCTTA+TGG | + | chr7.4:28208335-28208354 | MS.gene058643:intron | 20.0% |
| !!! | AATATTTTCATAAGTTGACT+TGG | - | chr7.4:28207496-28207515 | None:intergenic | 20.0% |
| !!! | TTTTTTTCATTTGATGTTAC+AGG | + | chr7.4:28208562-28208581 | MS.gene058643:intron | 20.0% |
| ! | AAAAATCGACATTTAAGAAC+AGG | - | chr7.4:28208329-28208348 | None:intergenic | 25.0% |
| ! | AAAATCGACATTTAAGAACA+GGG | - | chr7.4:28208328-28208347 | None:intergenic | 25.0% |
| ! | AATGTTGGAGATGAAAATAA+TGG | - | chr7.4:28207249-28207268 | None:intergenic | 25.0% |
| ! | CTACTAACATAGTAATAAAC+TGG | - | chr7.4:28207184-28207203 | None:intergenic | 25.0% |
| ! | GTAGAACTATCAAAATCAAA+TGG | + | chr7.4:28207989-28208008 | MS.gene058643:CDS | 25.0% |
| !! | TCACATTTTGTCAGATTTTT+TGG | - | chr7.4:28208228-28208247 | None:intergenic | 25.0% |
| !! | TTATTGTTTGGTAGAACTTT+TGG | + | chr7.4:28207417-28207436 | MS.gene058643:intron | 25.0% |
| !!! | ATAGGCTATTTCTATAACAA+AGG | - | chr7.4:28207556-28207575 | None:intergenic | 25.0% |
| AAATCGACATTTAAGAACAG+GGG | - | chr7.4:28208327-28208346 | None:intergenic | 30.0% | |
| AATAAAAAGGTGACGAATGT+TGG | - | chr7.4:28207264-28207283 | None:intergenic | 30.0% | |
| TGCTTGTGTAACTTAAAGAT+GGG | + | chr7.4:28208072-28208091 | MS.gene058643:intron | 30.0% | |
| TTGCTTGTGTAACTTAAAGA+TGG | + | chr7.4:28208071-28208090 | MS.gene058643:intron | 30.0% | |
| ! | AATATCATCGTGTGTTATTG+AGG | - | chr7.4:28207915-28207934 | None:intergenic | 30.0% |
| ! | GTACTTCTGAAAGAATAATC+TGG | + | chr7.4:28207354-28207373 | MS.gene058643:intron | 30.0% |
| ! | GTTTTCTCAAACTATTACCA+AGG | + | chr7.4:28208440-28208459 | MS.gene058643:intron | 30.0% |
| AAGAGAACAGCGAAAACAAA+TGG | - | chr7.4:28207325-28207344 | None:intergenic | 35.0% | |
| AATCTGCATCTTTATCTCCA+AGG | + | chr7.4:28207963-28207982 | MS.gene058643:CDS | 35.0% | |
| AGTATTTGCAACAGAAGAAG+AGG | + | chr7.4:28208018-28208037 | MS.gene058643:CDS | 35.0% | |
| ATGTTTCAGCCTATTACACA+AGG | + | chr7.4:28208115-28208134 | MS.gene058643:intron | 35.0% | |
| CTTGGAGAGCTAATAGAAAT+AGG | - | chr7.4:28207478-28207497 | None:intergenic | 35.0% | |
| TCTGAAAGAATAATCTGGTC+TGG | + | chr7.4:28207359-28207378 | MS.gene058643:intron | 35.0% | |
| ! | ACACGTCTAGAAGATGTTTT+CGG | + | chr7.4:28207452-28207471 | MS.gene058643:intron | 35.0% |
| ! | GACATTTTCTTTGCAAGACT+CGG | - | chr7.4:28207873-28207892 | None:intergenic | 35.0% |
| ! | TCCTTGCAAATGATGTTTTC+TGG | - | chr7.4:28207158-28207177 | None:intergenic | 35.0% |
| ! | TTTGATAGTTCTACCTTCCT+TGG | - | chr7.4:28207983-28208002 | None:intergenic | 35.0% |
| AAGACAGTGTCATAAGGAAG+AGG | - | chr7.4:28207827-28207846 | None:intergenic | 40.0% | |
| ACCTATCTTGCATTCTTGAG+TGG | + | chr7.4:28208259-28208278 | MS.gene058643:CDS | 40.0% | |
| ATCTTGCATTCTTGAGTGGA+TGG | + | chr7.4:28208263-28208282 | MS.gene058643:CDS | 40.0% | |
| CATCCATACCTGATACATTC+CGG | + | chr7.4:28207789-28207808 | MS.gene058643:CDS | 40.0% | |
| CTTACTCCTCCTTGTGTAAT+AGG | - | chr7.4:28208127-28208146 | None:intergenic | 40.0% | |
| CTTCCTTATGACACTGTCTT+CGG | + | chr7.4:28207827-28207846 | MS.gene058643:CDS | 40.0% | |
| GATTGAATGTAACCACGTGT+TGG | - | chr7.4:28208415-28208434 | None:intergenic | 40.0% | |
| GCATTAGCAATGATTGTGTG+AGG | + | chr7.4:28207297-28207316 | MS.gene058643:intron | 40.0% | |
| GCCAGAAAACATCATTTGCA+AGG | + | chr7.4:28207154-28207173 | MS.gene058643:CDS | 40.0% | |
| TCCACTCAAGAATGCAAGAT+AGG | - | chr7.4:28208263-28208282 | None:intergenic | 40.0% | |
| TGCATCTTTATCTCCAAGGA+AGG | + | chr7.4:28207967-28207986 | MS.gene058643:CDS | 40.0% | |
| TTTCAGCCTATTACACAAGG+AGG | + | chr7.4:28208118-28208137 | MS.gene058643:intron | 40.0% | |
| ACTGTACCTTCGAGGCAAAT+AGG | - | chr7.4:28208052-28208071 | None:intergenic | 45.0% | |
| AGACCGGAATGTATCAGGTA+TGG | - | chr7.4:28207795-28207814 | None:intergenic | 45.0% | |
| AGCACCACACTTCAGATTGA+AGG | + | chr7.4:28208358-28208377 | MS.gene058643:intron | 45.0% | |
| ATCGATACGAAACCAACACG+TGG | + | chr7.4:28208400-28208419 | MS.gene058643:intron | 45.0% | |
| CTCTTGTCCTATATGTGACC+AGG | + | chr7.4:28208296-28208315 | MS.gene058643:CDS | 45.0% | |
| CTGTACCTTCGAGGCAAATA+GGG | - | chr7.4:28208051-28208070 | None:intergenic | 45.0% | |
| GGACATACCTGGTCACATAT+AGG | - | chr7.4:28208306-28208325 | None:intergenic | 45.0% | |
| TATCAGGTATGGATGCTTCC+AGG | - | chr7.4:28207784-28207803 | None:intergenic | 45.0% | |
| TCTTTGCAAGACTCGGAATC+AGG | - | chr7.4:28207866-28207885 | None:intergenic | 45.0% | |
| TTAAGAACAGGGGACATACC+TGG | - | chr7.4:28208317-28208336 | None:intergenic | 45.0% | |
| TTCGATCTCTGCTGGATTTC+TGG | + | chr7.4:28207748-28207767 | MS.gene058643:CDS | 45.0% | |
| ! | AAGTTGGCGGGCACTAAAAA+CGG | - | chr7.4:28207685-28207704 | None:intergenic | 45.0% |
| ! | CGTATCGATGTCAAACACAC+CGG | - | chr7.4:28208389-28208408 | None:intergenic | 45.0% |
| ! | GACACCTTCAATCTGAAGTG+TGG | - | chr7.4:28208365-28208384 | None:intergenic | 45.0% |
| !! | ATCTCTGCTGGATTTCTGGT+TGG | + | chr7.4:28207752-28207771 | MS.gene058643:CDS | 45.0% |
| !! | ATTTCTGGTTGGCTTGAACC+TGG | + | chr7.4:28207763-28207782 | MS.gene058643:CDS | 45.0% |
| !! | CTTCAGATTGAAGGTGTCAC+CGG | + | chr7.4:28208367-28208386 | MS.gene058643:intron | 45.0% |
| !! | TAATGATTAAAATAATAAAA+AGG | - | chr7.4:28207277-28207296 | None:intergenic | 5.0% |
| CACAAGCAACTGTACCTTCG+AGG | - | chr7.4:28208060-28208079 | None:intergenic | 50.0% | |
| CCTCCGAAGACAGTGTCATA+AGG | - | chr7.4:28207833-28207852 | None:intergenic | 50.0% | |
| CCTTATGACACTGTCTTCGG+AGG | + | chr7.4:28207830-28207849 | MS.gene058643:CDS | 50.0% | |
| GACTCCCGCTCTTCAAAAGT+TGG | - | chr7.4:28207701-28207720 | None:intergenic | 50.0% | |
| TCCCGCTCTTCAAAAGTTGG+CGG | - | chr7.4:28207698-28207717 | None:intergenic | 50.0% | |
| TCGACGTGTTAGTGTCGTGT+CGG | + | chr7.4:28208463-28208482 | MS.gene058643:intron | 50.0% | |
| ! | GTGTCATAAGGAAGAGGCAC+AGG | - | chr7.4:28207821-28207840 | None:intergenic | 50.0% |
| ! | TCATAAGGAAGAGGCACAGG+AGG | - | chr7.4:28207818-28207837 | None:intergenic | 50.0% |
| !! | GTTAGTGTCGTGTCGGTTGT+TGG | + | chr7.4:28208470-28208489 | MS.gene058643:intron | 50.0% |
| ACCACTGCTTCGATCTCTGC+TGG | + | chr7.4:28207740-28207759 | MS.gene058643:CDS | 55.0% | |
| CCCGCTCTTCAAAAGTTGGC+GGG | - | chr7.4:28207697-28207716 | None:intergenic | 55.0% | |
| CGACACTAACACGTCGACCT+TGG | - | chr7.4:28208460-28208479 | None:intergenic | 55.0% | |
| GGAGGAGACCGGAATGTATC+AGG | - | chr7.4:28207800-28207819 | None:intergenic | 55.0% | |
| TCCAGCAGAGATCGAAGCAG+TGG | - | chr7.4:28207744-28207763 | None:intergenic | 55.0% | |
| TGCTGCCCTATTTGCCTCGA+AGG | + | chr7.4:28208043-28208062 | MS.gene058643:CDS | 55.0% | |
| ! | AGCAGTGGTAGCGTCATTGG+AGG | - | chr7.4:28207729-28207748 | None:intergenic | 55.0% |
| ! | CGAAGCAGTGGTAGCGTCAT+TGG | - | chr7.4:28207732-28207751 | None:intergenic | 55.0% |
| !! | CCCGCCAACTTTTGAAGAGC+GGG | + | chr7.4:28207694-28207713 | MS.gene058643:CDS | 55.0% |
| !! | GCCCGCCAACTTTTGAAGAG+CGG | + | chr7.4:28207693-28207712 | MS.gene058643:CDS | 55.0% |
| ! | GAAGAGGCACAGGAGGAGAC+CGG | - | chr7.4:28207811-28207830 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 28207133 | 28208598 | 28207133 | ID=MS.gene058643 |
| chr7.4 | mRNA | 28207133 | 28208598 | 28207133 | ID=MS.gene058643.t1;Parent=MS.gene058643 |
| chr7.4 | exon | 28207133 | 28207195 | 28207133 | ID=MS.gene058643.t1.exon1;Parent=MS.gene058643.t1 |
| chr7.4 | CDS | 28207133 | 28207195 | 28207133 | ID=cds.MS.gene058643.t1;Parent=MS.gene058643.t1 |
| chr7.4 | exon | 28207692 | 28208064 | 28207692 | ID=MS.gene058643.t1.exon2;Parent=MS.gene058643.t1 |
| chr7.4 | CDS | 28207692 | 28208064 | 28207692 | ID=cds.MS.gene058643.t1;Parent=MS.gene058643.t1 |
| chr7.4 | exon | 28208208 | 28208317 | 28208208 | ID=MS.gene058643.t1.exon3;Parent=MS.gene058643.t1 |
| chr7.4 | CDS | 28208208 | 28208317 | 28208208 | ID=cds.MS.gene058643.t1;Parent=MS.gene058643.t1 |
| chr7.4 | exon | 28208584 | 28208598 | 28208584 | ID=MS.gene058643.t1.exon4;Parent=MS.gene058643.t1 |
| chr7.4 | CDS | 28208584 | 28208598 | 28208584 | ID=cds.MS.gene058643.t1;Parent=MS.gene058643.t1 |
| Gene Sequence |
| Protein sequence |
