Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44135.t1 | XP_003591151.1 | 85.6 | 292 | 41 | 1 | 42 | 333 | 138 | 428 | 2.10E-136 | 495.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44135.t1 | G7I8Q2 | 85.6 | 292 | 41 | 1 | 42 | 333 | 138 | 428 | 1.5e-136 | 495.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene44135 | -0.80842 | 3.13E-50 | -1.69E-46 |
| MS.gene04917 | MS.gene44135 | -0.803196 | 3.91E-49 | -1.69E-46 |
| MS.gene049297 | MS.gene44135 | -0.83723 | 5.87E-57 | -1.69E-46 |
| MS.gene049378 | MS.gene44135 | -0.814777 | 1.30E-51 | -1.69E-46 |
| MS.gene049382 | MS.gene44135 | -0.846386 | 2.24E-59 | -1.69E-46 |
| MS.gene049599 | MS.gene44135 | 0.814896 | 1.22E-51 | -1.69E-46 |
| MS.gene049703 | MS.gene44135 | 0.827973 | 1.16E-54 | -1.69E-46 |
| MS.gene049756 | MS.gene44135 | -0.808066 | 3.72E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene44135 | -0.819389 | 1.19E-52 | -1.69E-46 |
| MS.gene050226 | MS.gene44135 | -0.81877 | 1.65E-52 | -1.69E-46 |
| MS.gene050227 | MS.gene44135 | -0.836718 | 7.94E-57 | -1.69E-46 |
| MS.gene050228 | MS.gene44135 | -0.825206 | 5.32E-54 | -1.69E-46 |
| MS.gene050319 | MS.gene44135 | 0.818663 | 1.74E-52 | -1.69E-46 |
| MS.gene050330 | MS.gene44135 | 0.835886 | 1.29E-56 | -1.69E-46 |
| MS.gene050558 | MS.gene44135 | -0.812317 | 4.51E-51 | -1.69E-46 |
| MS.gene050586 | MS.gene44135 | -0.811859 | 5.67E-51 | -1.69E-46 |
| MS.gene050623 | MS.gene44135 | 0.840123 | 1.05E-57 | -1.69E-46 |
| MS.gene050629 | MS.gene44135 | 0.847511 | 1.10E-59 | -1.69E-46 |
| MS.gene050719 | MS.gene44135 | -0.81554 | 8.77E-52 | -1.69E-46 |
| MS.gene050721 | MS.gene44135 | -0.816259 | 6.06E-52 | -1.69E-46 |
| MS.gene050762 | MS.gene44135 | -0.839611 | 1.43E-57 | -1.69E-46 |
| MS.gene050763 | MS.gene44135 | -0.840924 | 6.48E-58 | -1.69E-46 |
| MS.gene050807 | MS.gene44135 | -0.837337 | 5.52E-57 | -1.69E-46 |
| MS.gene050808 | MS.gene44135 | -0.809255 | 2.07E-50 | -1.69E-46 |
| MS.gene050815 | MS.gene44135 | -0.804819 | 1.80E-49 | -1.69E-46 |
| MS.gene051063 | MS.gene44135 | -0.817621 | 3.00E-52 | -1.69E-46 |
| MS.gene051080 | MS.gene44135 | 0.803721 | 3.05E-49 | -1.69E-46 |
| MS.gene051102 | MS.gene44135 | -0.800273 | 1.56E-48 | -1.69E-46 |
| MS.gene05119 | MS.gene44135 | 0.806586 | 7.65E-50 | -1.69E-46 |
| MS.gene051245 | MS.gene44135 | -0.802591 | 5.22E-49 | -1.69E-46 |
| MS.gene051662 | MS.gene44135 | -0.813594 | 2.37E-51 | -1.69E-46 |
| MS.gene051663 | MS.gene44135 | -0.815039 | 1.13E-51 | -1.69E-46 |
| MS.gene051789 | MS.gene44135 | -0.835819 | 1.34E-56 | -1.69E-46 |
| MS.gene052176 | MS.gene44135 | -0.831764 | 1.39E-55 | -1.69E-46 |
| MS.gene052254 | MS.gene44135 | -0.809107 | 2.23E-50 | -1.69E-46 |
| MS.gene052256 | MS.gene44135 | -0.808769 | 2.63E-50 | -1.69E-46 |
| MS.gene052302 | MS.gene44135 | -0.836452 | 9.28E-57 | -1.69E-46 |
| MS.gene052358 | MS.gene44135 | 0.80741 | 5.12E-50 | -1.69E-46 |
| MS.gene052376 | MS.gene44135 | -0.829461 | 5.08E-55 | -1.69E-46 |
| MS.gene052665 | MS.gene44135 | -0.830042 | 3.67E-55 | -1.69E-46 |
| MS.gene052856 | MS.gene44135 | -0.813341 | 2.69E-51 | -1.69E-46 |
| MS.gene052858 | MS.gene44135 | -0.807784 | 4.27E-50 | -1.69E-46 |
| MS.gene052860 | MS.gene44135 | -0.800906 | 1.16E-48 | -1.69E-46 |
| MS.gene053437 | MS.gene44135 | -0.81479 | 1.29E-51 | -1.69E-46 |
| MS.gene053630 | MS.gene44135 | -0.817944 | 2.54E-52 | -1.69E-46 |
| MS.gene053836 | MS.gene44135 | -0.823224 | 1.55E-53 | -1.69E-46 |
| MS.gene054379 | MS.gene44135 | -0.840378 | 9.02E-58 | -1.69E-46 |
| MS.gene054473 | MS.gene44135 | -0.809234 | 2.09E-50 | -1.69E-46 |
| MS.gene054542 | MS.gene44135 | -0.800991 | 1.11E-48 | -1.69E-46 |
| MS.gene05462 | MS.gene44135 | -0.814472 | 1.51E-51 | -1.69E-46 |
| MS.gene054930 | MS.gene44135 | -0.82965 | 4.57E-55 | -1.69E-46 |
| MS.gene054942 | MS.gene44135 | -0.827389 | 1.61E-54 | -1.69E-46 |
| MS.gene055591 | MS.gene44135 | 0.834303 | 3.24E-56 | -1.69E-46 |
| MS.gene056069 | MS.gene44135 | 0.968069 | 3.72E-128 | -1.69E-46 |
| MS.gene056584 | MS.gene44135 | -0.815867 | 7.42E-52 | -1.69E-46 |
| MS.gene056589 | MS.gene44135 | -0.809377 | 1.95E-50 | -1.69E-46 |
| MS.gene056760 | MS.gene44135 | -0.804534 | 2.06E-49 | -1.69E-46 |
| MS.gene057057 | MS.gene44135 | -0.819348 | 1.22E-52 | -1.69E-46 |
| MS.gene057260 | MS.gene44135 | -0.803219 | 3.87E-49 | -1.69E-46 |
| MS.gene058168 | MS.gene44135 | -0.81104 | 8.54E-51 | -1.69E-46 |
| MS.gene058182 | MS.gene44135 | -0.843916 | 1.04E-58 | -1.69E-46 |
| MS.gene058643 | MS.gene44135 | 0.825025 | 5.87E-54 | -1.69E-46 |
| MS.gene058661 | MS.gene44135 | 0.816772 | 4.66E-52 | -1.69E-46 |
| MS.gene058798 | MS.gene44135 | -0.806031 | 1.00E-49 | -1.69E-46 |
| MS.gene058851 | MS.gene44135 | -0.800909 | 1.16E-48 | -1.69E-46 |
| MS.gene058906 | MS.gene44135 | -0.830761 | 2.45E-55 | -1.69E-46 |
| MS.gene059033 | MS.gene44135 | 0.809901 | 1.50E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene44135 | -0.824339 | 8.52E-54 | -1.69E-46 |
| MS.gene060137 | MS.gene44135 | 0.805277 | 1.44E-49 | -1.69E-46 |
| MS.gene060165 | MS.gene44135 | -0.814004 | 1.92E-51 | -1.69E-46 |
| MS.gene060404 | MS.gene44135 | -0.818287 | 2.12E-52 | -1.69E-46 |
| MS.gene060476 | MS.gene44135 | -0.81821 | 2.21E-52 | -1.69E-46 |
| MS.gene060619 | MS.gene44135 | -0.826002 | 3.44E-54 | -1.69E-46 |
| MS.gene060683 | MS.gene44135 | -0.809347 | 1.98E-50 | -1.69E-46 |
| MS.gene060685 | MS.gene44135 | -0.807478 | 4.96E-50 | -1.69E-46 |
| MS.gene061040 | MS.gene44135 | 0.806251 | 9.01E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44135.t1 | MTR_1g083390 | 96.233 | 292 | 10 | 1 | 42 | 333 | 138 | 428 | 0.0 | 559 |
| MS.gene44135.t1 | MTR_7g112740 | 64.130 | 276 | 93 | 3 | 58 | 333 | 143 | 412 | 6.70e-104 | 311 |
| MS.gene44135.t1 | MTR_7g112740 | 59.470 | 264 | 98 | 4 | 70 | 333 | 132 | 386 | 1.22e-82 | 255 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44135.t1 | AT3G05545 | 42.435 | 271 | 111 | 15 | 50 | 297 | 151 | 399 | 9.35e-25 | 104 |
Find 127 sgRNAs with CRISPR-Local
Find 381 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCCAACAACTTTCGTTTA+AGG | 0.128049 | 1.3:+58968582 | MS.gene44135:CDS |
| CAGTCATCCATGCTGAATTC+TGG | 0.287241 | 1.3:-58964123 | None:intergenic |
| CTTATCCCGTCAAGTTCTTC+AGG | 0.313291 | 1.3:+58968410 | MS.gene44135:CDS |
| CATCCATCCTCCTCCAATTC+AGG | 0.337711 | 1.3:+58967607 | MS.gene44135:CDS |
| TGCAGTCATTTGGAGTTCAT+TGG | 0.343375 | 1.3:+58964800 | MS.gene44135:intron |
| TTTATGCATCCCTTTCTTGT+TGG | 0.343718 | 1.3:+58967865 | MS.gene44135:CDS |
| CCGCTAGTCAAAGGCCAGTC+AGG | 0.344997 | 1.3:+58967812 | MS.gene44135:CDS |
| AGCCAAGGTGATAGAGATTC+AGG | 0.356744 | 1.3:+58968512 | MS.gene44135:CDS |
| GATGCAGATCCTGATATAAT+TGG | 0.357139 | 1.3:+58967502 | MS.gene44135:intron |
| TGATACAGCTCCGCCTGAAT+TGG | 0.357890 | 1.3:-58967620 | None:intergenic |
| GCCCGCATTGTGGTTGAGTT+AGG | 0.363848 | 1.3:-58968287 | None:intergenic |
| GGAGTTCATTGGTGCCCATT+TGG | 0.365386 | 1.3:+58964811 | MS.gene44135:CDS |
| CCATTCCAATGGTTGAAGTT+AGG | 0.374138 | 1.3:-58967649 | None:intergenic |
| TACCGAGTCGCTTTCATGCT+TGG | 0.381590 | 1.3:+58968459 | MS.gene44135:CDS |
| TGCCCGTACGTTGCTTACTT+TGG | 0.391855 | 1.3:+58967577 | MS.gene44135:CDS |
| CTGAAGAACTTGACGGGATA+AGG | 0.393601 | 1.3:-58968409 | None:intergenic |
| GCATGTTGTCCAATTATATC+AGG | 0.397854 | 1.3:-58967511 | None:intergenic |
| ACCGAGTCGCTTTCATGCTT+GGG | 0.399672 | 1.3:+58968460 | MS.gene44135:CDS |
| ATGCCTTAAACGAAAGTTGT+TGG | 0.400097 | 1.3:-58968585 | None:intergenic |
| TGCCAGAGCGGGTAGCTCAA+TGG | 0.400451 | 1.3:+58968172 | MS.gene44135:CDS |
| GGCTTTATGCTAATGGTTCT+CGG | 0.403781 | 1.3:+58964094 | None:intergenic |
| AAATGGTTTCTGCAGTCATT+TGG | 0.407123 | 1.3:+58964790 | MS.gene44135:intron |
| ACCGTGACTGCTGGCTCGTC+GGG | 0.419567 | 1.3:-58968327 | None:intergenic |
| CGAGCATTGCTGCCAGGATA+AGG | 0.421117 | 1.3:-58968212 | None:intergenic |
| AAGTTGTTGGATCTGGTACT+TGG | 0.422418 | 1.3:-58968572 | None:intergenic |
| GCCAGAGCGGGTAGCTCAAT+GGG | 0.423509 | 1.3:+58968173 | MS.gene44135:CDS |
| TAAACGAAAGTTGTTGGATC+TGG | 0.424569 | 1.3:-58968579 | None:intergenic |
| GCCCATTGAGCTACCCGCTC+TGG | 0.428870 | 1.3:-58968174 | None:intergenic |
| GGTCTGACCGGTTCGCGGAT+TGG | 0.435931 | 1.3:-58968550 | None:intergenic |
| CATGAAAGCGACTCGGTAGA+TGG | 0.436397 | 1.3:-58968454 | None:intergenic |
| TGCAGTTCTGCTGCCAGAGC+GGG | 0.437404 | 1.3:+58968161 | MS.gene44135:intron |
| CGTCGGGCAACAGAAGAAAC+GGG | 0.438022 | 1.3:-58968311 | None:intergenic |
| ATCCCTTTCTTGTTGGCCAC+AGG | 0.440114 | 1.3:+58967872 | MS.gene44135:CDS |
| ATCTGGTACTTGGGTCTGAC+CGG | 0.441514 | 1.3:-58968562 | None:intergenic |
| CACCGTGACTGCTGGCTCGT+CGG | 0.445484 | 1.3:-58968328 | None:intergenic |
| TGATCTTAGCTACTCTGAAA+TGG | 0.446810 | 1.3:+58964167 | MS.gene44135:CDS |
| GTCGTGCCATGTTGCCAAAT+GGG | 0.453928 | 1.3:-58964825 | None:intergenic |
| TGCATAAAAGATCCTGATCT+TGG | 0.455989 | 1.3:-58967850 | None:intergenic |
| TGGTCTGGTGATGTGGCCAC+TGG | 0.467080 | 1.3:-58968371 | None:intergenic |
| TGATAGAGTCCAAGCACTTC+AGG | 0.468635 | 1.3:+58968241 | MS.gene44135:CDS |
| GTACCTGTGGCCAACAAGAA+AGG | 0.477874 | 1.3:-58967875 | None:intergenic |
| TACAGCTCCGCCTGAATTGG+AGG | 0.479399 | 1.3:-58967617 | None:intergenic |
| TCAATGATCCCTCCTTATCC+TGG | 0.480471 | 1.3:+58968200 | MS.gene44135:CDS |
| CAGAATTCAGCATGGATGAC+TGG | 0.481270 | 1.3:+58964124 | MS.gene44135:CDS |
| ACATCTGAACCACCCCTGAC+TGG | 0.484638 | 1.3:-58967826 | None:intergenic |
| TGGATCTTCATTATCACAGT+TGG | 0.490022 | 1.3:+58967719 | MS.gene44135:CDS |
| AAAGTAAGCAACGTACGGGC+AGG | 0.490583 | 1.3:-58967575 | None:intergenic |
| AGTTGAACCACCGTGACTGC+TGG | 0.492769 | 1.3:-58968336 | None:intergenic |
| GGTTCAGATGTACCAAGATC+AGG | 0.493227 | 1.3:+58967838 | MS.gene44135:CDS |
| CGGTTCGCGGATTGGTGGTA+CGG | 0.495953 | 1.3:-58968542 | None:intergenic |
| CGCTAGTCAAAGGCCAGTCA+GGG | 0.497658 | 1.3:+58967813 | MS.gene44135:CDS |
| TGCTGCATTTGCTGAACATA+CGG | 0.498654 | 1.3:+58967531 | MS.gene44135:CDS |
| AACAACTTTCGTTTAAGGCA+TGG | 0.500049 | 1.3:+58968587 | MS.gene44135:CDS |
| GGATCTTCATTATCACAGTT+GGG | 0.502373 | 1.3:+58967720 | MS.gene44135:CDS |
| TCGTCGGGCAACAGAAGAAA+CGG | 0.505670 | 1.3:-58968312 | None:intergenic |
| TAGGCTTACTCGAAAGATGA+TGG | 0.510811 | 1.3:-58964850 | None:intergenic |
| CGACTGTTTGCAGTAGAGAA+AGG | 0.512078 | 1.3:-58967757 | None:intergenic |
| AGTCGTGCCATGTTGCCAAA+TGG | 0.512759 | 1.3:-58964826 | None:intergenic |
| CGTACCACCAATCCGCGAAC+CGG | 0.515657 | 1.3:+58968543 | MS.gene44135:CDS |
| GCAGGAAATGTGTAGGAAGC+TGG | 0.521105 | 1.3:-58967694 | None:intergenic |
| CGGGCACGAGCATTGCTGCC+AGG | 0.522313 | 1.3:-58968218 | None:intergenic |
| TTGGTGCCCATTTGGCAACA+TGG | 0.526111 | 1.3:+58964819 | MS.gene44135:CDS |
| GCCCGACGAGCCAGCAGTCA+CGG | 0.526696 | 1.3:+58968326 | MS.gene44135:CDS |
| CAGAGTAGCTAAGATCATAT+AGG | 0.528717 | 1.3:-58964161 | None:intergenic |
| TTGGAGGAGGATGGATGTAT+TGG | 0.530302 | 1.3:-58967601 | None:intergenic |
| ACTTGGGTCTGACCGGTTCG+CGG | 0.531816 | 1.3:-58968555 | None:intergenic |
| TCCTAACTCAACCACAATGC+GGG | 0.531962 | 1.3:+58968286 | MS.gene44135:CDS |
| CGGTGTCACCCGCTAGTCAA+AGG | 0.532231 | 1.3:+58967803 | MS.gene44135:CDS |
| TACCTGTGGCCAACAAGAAA+GGG | 0.532318 | 1.3:-58967874 | None:intergenic |
| CTGACTGGCCTTTGACTAGC+GGG | 0.536730 | 1.3:-58967811 | None:intergenic |
| AAGAAACCACCACTTTGGTC+TGG | 0.541440 | 1.3:-58968386 | None:intergenic |
| AGTTGTTGGATCTGGTACTT+GGG | 0.541944 | 1.3:-58968571 | None:intergenic |
| GATAGTATGCCTGAAGTGCT+TGG | 0.542324 | 1.3:-58968250 | None:intergenic |
| CCTTCATTGTCGTTGAGCCA+AGG | 0.551844 | 1.3:+58968497 | MS.gene44135:CDS |
| ACCACTTTGGTCTGGTGATG+TGG | 0.552256 | 1.3:-58968378 | None:intergenic |
| CCGCCTGAATTGGAGGAGGA+TGG | 0.555004 | 1.3:-58967610 | None:intergenic |
| AGTTGGTGCTGATCAGCCCT+CGG | 0.555676 | 1.3:+58967783 | MS.gene44135:CDS |
| TTCCTACACATTTCCTGCCG+TGG | 0.556162 | 1.3:+58967699 | MS.gene44135:CDS |
| GAAGTGCTTGGACTCTATCA+CGG | 0.556300 | 1.3:-58968238 | None:intergenic |
| AAGCACCTAACTTCAACCAT+TGG | 0.558104 | 1.3:+58967644 | MS.gene44135:CDS |
| ACTGCAAACAGTCGTCTAGT+TGG | 0.559448 | 1.3:+58967766 | MS.gene44135:CDS |
| TTACGTCCTGAAGAACTTGA+CGG | 0.561945 | 1.3:-58968416 | None:intergenic |
| GTCCAAAGTAAGCAACGTAC+GGG | 0.566614 | 1.3:-58967579 | None:intergenic |
| TAAGGAAGAAACCACCACTT+TGG | 0.567028 | 1.3:-58968391 | None:intergenic |
| GGTCCAAAGTAAGCAACGTA+CGG | 0.567371 | 1.3:-58967580 | None:intergenic |
| CCTTGGCTCAACGACAATGA+AGG | 0.567787 | 1.3:-58968497 | None:intergenic |
| TACGTCCTGAAGAACTTGAC+GGG | 0.568123 | 1.3:-58968415 | None:intergenic |
| TAGGAAGCTGGCATTTCACT+AGG | 0.568154 | 1.3:-58967682 | None:intergenic |
| AAGTGCTTGGACTCTATCAC+GGG | 0.574743 | 1.3:-58968237 | None:intergenic |
| GGGATGACTAGCAGATGATA+CGG | 0.579316 | 1.3:-58967554 | None:intergenic |
| GTGTATTACCGATGTTGTGA+AGG | 0.583061 | 1.3:-58968623 | None:intergenic |
| AAGTAAGCAACGTACGGGCA+GGG | 0.588543 | 1.3:-58967574 | None:intergenic |
| TCAACGACAATGAAGGTAAG+TGG | 0.591021 | 1.3:-58968490 | None:intergenic |
| TGATAATGAAGATCCACGGC+AGG | 0.591704 | 1.3:-58967712 | None:intergenic |
| CCTGACTGGCCTTTGACTAG+CGG | 0.594423 | 1.3:-58967812 | None:intergenic |
| TGTTTGCAGTAGAGAAAGGA+GGG | 0.595785 | 1.3:-58967753 | None:intergenic |
| TGACTAGCGGGTGACACCGA+GGG | 0.598180 | 1.3:-58967799 | None:intergenic |
| GCATTGCTGCCAGGATAAGG+AGG | 0.599766 | 1.3:-58968209 | None:intergenic |
| TCTGGTGATGTGGCCACTGG+TGG | 0.604708 | 1.3:-58968368 | None:intergenic |
| AAGGTGATAGAGATTCAGGC+TGG | 0.604869 | 1.3:+58968516 | MS.gene44135:CDS |
| AGCCTGAATCTCTATCACCT+TGG | 0.605048 | 1.3:-58968514 | None:intergenic |
| CCTAACTTCAACCATTGGAA+TGG | 0.606132 | 1.3:+58967649 | MS.gene44135:CDS |
| CTGCAGTTCTGCTGCCAGAG+CGG | 0.607367 | 1.3:+58968160 | MS.gene44135:intron |
| AGCTCCGCCTGAATTGGAGG+AGG | 0.614129 | 1.3:-58967614 | None:intergenic |
| TCCCAAGCATGAAAGCGACT+CGG | 0.629927 | 1.3:-58968461 | None:intergenic |
| CTGACCGGTTCGCGGATTGG+TGG | 0.629946 | 1.3:-58968547 | None:intergenic |
| CTGTTTGCAGTAGAGAAAGG+AGG | 0.633196 | 1.3:-58967754 | None:intergenic |
| TTGACTAGCGGGTGACACCG+AGG | 0.636852 | 1.3:-58967800 | None:intergenic |
| AACTCAACTAACACCACCAG+TGG | 0.638606 | 1.3:+58968355 | MS.gene44135:CDS |
| ATCCACGGCAGGAAATGTGT+AGG | 0.639525 | 1.3:-58967701 | None:intergenic |
| GCACAGATGAGCCATTCCAA+TGG | 0.642442 | 1.3:-58967660 | None:intergenic |
| GTCATATCCAGAATTCAGCA+TGG | 0.655390 | 1.3:+58964116 | MS.gene44135:CDS |
| AGTCAAAGGCCAGTCAGGGG+TGG | 0.657830 | 1.3:+58967817 | MS.gene44135:CDS |
| CATTGCTGCCAGGATAAGGA+GGG | 0.659582 | 1.3:-58968208 | None:intergenic |
| CCATCCTCCTCCAATTCAGG+CGG | 0.664837 | 1.3:+58967610 | MS.gene44135:CDS |
| GGATGACTGGACGCATGATG+AGG | 0.669707 | 1.3:+58964137 | MS.gene44135:CDS |
| ATAGAATGCCTTCACAACAT+CGG | 0.671385 | 1.3:+58968615 | MS.gene44135:CDS |
| ACTGTGATAATGAAGATCCA+CGG | 0.675847 | 1.3:-58967716 | None:intergenic |
| ATCCTAACTCAACCACAATG+CGG | 0.678429 | 1.3:+58968285 | MS.gene44135:CDS |
| GTCGGGCAACAGAAGAAACG+GGG | 0.684072 | 1.3:-58968310 | None:intergenic |
| GCTAGTCAAAGGCCAGTCAG+GGG | 0.689303 | 1.3:+58967814 | MS.gene44135:CDS |
| GCCACATCACCAGACCAAAG+TGG | 0.699850 | 1.3:+58968377 | MS.gene44135:CDS |
| ACATCACCAGACCAAAGTGG+TGG | 0.710930 | 1.3:+58968380 | MS.gene44135:CDS |
| GTTTGCAGTAGAGAAAGGAG+GGG | 0.721941 | 1.3:-58967752 | None:intergenic |
| TCGGGCAACAGAAGAAACGG+GGG | 0.727112 | 1.3:-58968309 | None:intergenic |
| CGACGAGCCAGCAGTCACGG+TGG | 0.744778 | 1.3:+58968329 | MS.gene44135:CDS |
| GTTGAGTTAGGATGTTGCTG+CGG | 0.749322 | 1.3:-58968275 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTATTTATTTAATAT+AGG | - | chr1.3:58967919-58967938 | None:intergenic | 0.0% |
| !! | AAAAAGATGTAAAATAATTA+GGG | - | chr1.3:58966948-58966967 | None:intergenic | 10.0% |
| !! | TAAAATTTAAGAAACATTAA+AGG | - | chr1.3:58967302-58967321 | None:intergenic | 10.0% |
| !! | TTTCAATAAATTAATATATC+TGG | - | chr1.3:58967476-58967495 | None:intergenic | 10.0% |
| !!! | AAGAAAAAAACAATTTTTTT+GGG | - | chr1.3:58965140-58965159 | None:intergenic | 10.0% |
| !!! | AATAATTTCTCTTTATTTAT+AGG | + | chr1.3:58966481-58966500 | MS.gene44135:intron | 10.0% |
| !!! | TTTAATGTTTCTTAAATTTT+AGG | + | chr1.3:58967301-58967320 | MS.gene44135:intron | 10.0% |
| !! | AAAAGATGTAAAATAATTAG+GGG | - | chr1.3:58966947-58966966 | None:intergenic | 15.0% |
| !! | AAGTAATTTCACTAAAAATT+TGG | - | chr1.3:58966034-58966053 | None:intergenic | 15.0% |
| !! | AATCAAAAAAAAAAAACTAC+AGG | - | chr1.3:58965716-58965735 | None:intergenic | 15.0% |
| !! | ATCAAAAAAAAAAAACTACA+GGG | - | chr1.3:58965715-58965734 | None:intergenic | 15.0% |
| !! | GAAAAAGATGTAAAATAATT+AGG | - | chr1.3:58966949-58966968 | None:intergenic | 15.0% |
| !! | GATCATTTATGTATTATAAA+TGG | - | chr1.3:58964623-58964642 | None:intergenic | 15.0% |
| !!! | ATATTTTATTCTTTTAAGCT+AGG | + | chr1.3:58966618-58966637 | MS.gene44135:intron | 15.0% |
| !!! | GAAGAAAAAAACAATTTTTT+TGG | - | chr1.3:58965141-58965160 | None:intergenic | 15.0% |
| !!! | GGAGAAAAAAAAAATATTTT+AGG | - | chr1.3:58965052-58965071 | None:intergenic | 15.0% |
| !!! | TTTTTTTAGTTACTATACAT+TGG | - | chr1.3:58964542-58964561 | None:intergenic | 15.0% |
| !! | AATTCTGATAAGTAAAATCA+AGG | + | chr1.3:58965640-58965659 | MS.gene44135:intron | 20.0% |
| !! | ACCACTTATACATATAAAAA+TGG | - | chr1.3:58964658-58964677 | None:intergenic | 20.0% |
| !! | ATGACAAATGAAAGTTAATT+AGG | - | chr1.3:58964872-58964891 | None:intergenic | 20.0% |
| !! | ATTCTGATAAGTAAAATCAA+GGG | + | chr1.3:58965641-58965660 | MS.gene44135:intron | 20.0% |
| !! | ATTTATCATATCTCAATGTT+CGG | + | chr1.3:58967985-58968004 | MS.gene44135:intron | 20.0% |
| !! | CATTGAGATATGATAAATTA+CGG | - | chr1.3:58967983-58968002 | None:intergenic | 20.0% |
| !! | GAACTAAAGATAAGAAATAA+TGG | + | chr1.3:58968048-58968067 | MS.gene44135:intron | 20.0% |
| !! | TCAAAAAAAAAAAACTACAG+GGG | - | chr1.3:58965714-58965733 | None:intergenic | 20.0% |
| !! | TGATTAGTAAAAGTCAAATA+AGG | - | chr1.3:58965532-58965551 | None:intergenic | 20.0% |
| !! | TGTCTCTCAATATAATAAAA+GGG | - | chr1.3:58964731-58964750 | None:intergenic | 20.0% |
| !! | TTCTTCTCTTGTAATATAAT+TGG | + | chr1.3:58966305-58966324 | MS.gene44135:intron | 20.0% |
| !! | TTGTCTCTCAATATAATAAA+AGG | - | chr1.3:58964732-58964751 | None:intergenic | 20.0% |
| !!! | AAAAAAATATTTTAGGACAC+TGG | - | chr1.3:58965045-58965064 | None:intergenic | 20.0% |
| !!! | AGCTTTAATCTTCTTAATAT+AGG | - | chr1.3:58964261-58964280 | None:intergenic | 20.0% |
| !!! | ATAAAAATGGATTTCATCTT+TGG | - | chr1.3:58964645-58964664 | None:intergenic | 20.0% |
| !!! | CTTAAATTTTAGGTGTTTTT+AGG | + | chr1.3:58967311-58967330 | MS.gene44135:intron | 20.0% |
| !!! | TATGATATGATTTTGTTCTT+TGG | + | chr1.3:58964895-58964914 | MS.gene44135:intron | 20.0% |
| !!! | TCCATTTTTATATGTATAAG+TGG | + | chr1.3:58964654-58964673 | MS.gene44135:intron | 20.0% |
| !!! | TGATTTTACTTATCAGAATT+AGG | - | chr1.3:58965640-58965659 | None:intergenic | 20.0% |
| !!! | TTAATGGATTCCTATATTTA+GGG | + | chr1.3:58967114-58967133 | MS.gene44135:intron | 20.0% |
| !!! | TTACTGTTATTAAGATTTTG+TGG | + | chr1.3:58965832-58965851 | MS.gene44135:intron | 20.0% |
| !!! | TTTTTATATGTATAAGTGGT+TGG | + | chr1.3:58964658-58964677 | MS.gene44135:intron | 20.0% |
| ! | AAAAAAAAAAAACTACAGGG+GGG | - | chr1.3:58965712-58965731 | None:intergenic | 25.0% |
| ! | AAGTAAAATCAAGGGTTAAT+AGG | + | chr1.3:58965649-58965668 | MS.gene44135:intron | 25.0% |
| ! | AATAAAATATGTACTTCTGC+TGG | - | chr1.3:58966608-58966627 | None:intergenic | 25.0% |
| ! | AATAAGGTTAAAATGAAGCA+AGG | - | chr1.3:58965516-58965535 | None:intergenic | 25.0% |
| ! | AATCAACAATTAATGCTATG+AGG | + | chr1.3:58966972-58966991 | MS.gene44135:intron | 25.0% |
| ! | AATGACAGGAAATAATAAAC+TGG | - | chr1.3:58966669-58966688 | None:intergenic | 25.0% |
| ! | AATGCCTTTCAAAATTCAAA+GGG | - | chr1.3:58966891-58966910 | None:intergenic | 25.0% |
| ! | ACAAAAAGATCTACAAATGA+AGG | - | chr1.3:58964494-58964513 | None:intergenic | 25.0% |
| ! | ACTATTACAGATATTAGTGT+GGG | - | chr1.3:58966239-58966258 | None:intergenic | 25.0% |
| ! | ACTGCTAATGTAAAAAACTT+AGG | - | chr1.3:58965472-58965491 | None:intergenic | 25.0% |
| ! | AGAGTAAATTGAGTGATTTA+GGG | - | chr1.3:58966461-58966480 | None:intergenic | 25.0% |
| ! | AGATATGATAAATTACGGTT+TGG | - | chr1.3:58967978-58967997 | None:intergenic | 25.0% |
| ! | ATAAAATATGTACTTCTGCT+GGG | - | chr1.3:58966607-58966626 | None:intergenic | 25.0% |
| ! | ATGTAAGAAGTTAGCTAATT+AGG | - | chr1.3:58966558-58966577 | None:intergenic | 25.0% |
| ! | CAAAAAAAAAAAACTACAGG+GGG | - | chr1.3:58965713-58965732 | None:intergenic | 25.0% |
| ! | GAACAAGAAATAATTCCAAA+CGG | - | chr1.3:58964709-58964728 | None:intergenic | 25.0% |
| ! | TAAAATAATTAGGGGAATGT+TGG | - | chr1.3:58966939-58966958 | None:intergenic | 25.0% |
| ! | TAATAACAGTAAGATTTCCA+TGG | - | chr1.3:58965824-58965843 | None:intergenic | 25.0% |
| ! | TAGAGTAAATTGAGTGATTT+AGG | - | chr1.3:58966462-58966481 | None:intergenic | 25.0% |
| ! | TTATATTACAAGAGAAGAAC+AGG | - | chr1.3:58966304-58966323 | None:intergenic | 25.0% |
| ! | TTTATTTATCCATCCACTAT+CGG | - | chr1.3:58965289-58965308 | None:intergenic | 25.0% |
| !! | AAATTCAAAAGTTGGTTTCT+TGG | + | chr1.3:58965869-58965888 | MS.gene44135:intron | 25.0% |
| !! | ACTTTTAGATTCAACTTAGT+TGG | + | chr1.3:58966066-58966085 | MS.gene44135:intron | 25.0% |
| !! | CATAAATTTTCTATTGCTCT+TGG | - | chr1.3:58964404-58964423 | None:intergenic | 25.0% |
| !! | GACAAAATAATTTGTCAAGA+GGG | - | chr1.3:58966854-58966873 | None:intergenic | 25.0% |
| !! | GACTTTTACTAATCAACTTT+GGG | + | chr1.3:58965537-58965556 | MS.gene44135:intron | 25.0% |
| !! | TAATGGATCTCATATCTAAT+TGG | + | chr1.3:58968065-58968084 | MS.gene44135:intron | 25.0% |
| !! | TGACTTTTACTAATCAACTT+TGG | + | chr1.3:58965536-58965555 | MS.gene44135:intron | 25.0% |
| !!! | GTTAAGTATGCAATTAGTTT+TGG | + | chr1.3:58968017-58968036 | MS.gene44135:intron | 25.0% |
| !!! | GTTAATGGATTCCTATATTT+AGG | + | chr1.3:58967113-58967132 | MS.gene44135:intron | 25.0% |
| !!! | TGATGTGCTGAATTTTAATA+TGG | + | chr1.3:58965612-58965631 | MS.gene44135:intron | 25.0% |
| AAAAAACTCCCCTGTAATAT+AGG | - | chr1.3:58965775-58965794 | None:intergenic | 30.0% | |
| AACGTATCATCAGGTATTAA+TGG | - | chr1.3:58964578-58964597 | None:intergenic | 30.0% | |
| AAGAGAAATAACGTATCATC+AGG | - | chr1.3:58964587-58964606 | None:intergenic | 30.0% | |
| ACAGTGGTAGTATGTTATAA+TGG | + | chr1.3:58967137-58967156 | MS.gene44135:intron | 30.0% | |
| ACCATATAATAACACACTGA+TGG | + | chr1.3:58964283-58964302 | MS.gene44135:intron | 30.0% | |
| ACGGGAAATAAGAAAATTTG+TGG | - | chr1.3:58967087-58967106 | None:intergenic | 30.0% | |
| AGAGGCTTATTAAAAGGAAA+GGG | - | chr1.3:58967423-58967442 | None:intergenic | 30.0% | |
| ATAAATTAACATCCGTGTAG+TGG | + | chr1.3:58965437-58965456 | MS.gene44135:intron | 30.0% | |
| ATCAGGTATTAATGGTACAT+TGG | - | chr1.3:58964570-58964589 | None:intergenic | 30.0% | |
| ATGCCTTTCAAAATTCAAAG+GGG | - | chr1.3:58966890-58966909 | None:intergenic | 30.0% | |
| ATTTACCCCTGTAAAAAAAG+GGG | + | chr1.3:58965733-58965752 | MS.gene44135:intron | 30.0% | |
| ATTTCCCGTGATTTAGTTAA+TGG | + | chr1.3:58967098-58967117 | MS.gene44135:intron | 30.0% | |
| CAATGCCTTTCAAAATTCAA+AGG | - | chr1.3:58966892-58966911 | None:intergenic | 30.0% | |
| CACTATTACAGATATTAGTG+TGG | - | chr1.3:58966240-58966259 | None:intergenic | 30.0% | |
| CAGTGGTAGTATGTTATAAT+GGG | + | chr1.3:58967138-58967157 | MS.gene44135:intron | 30.0% | |
| CATACTAATGGAAAAAGGAA+CGG | - | chr1.3:58964346-58964365 | None:intergenic | 30.0% | |
| CATATTCTGGATTAAACAGT+TGG | - | chr1.3:58965937-58965956 | None:intergenic | 30.0% | |
| CTATATTCGCTCCTAAATAT+AGG | + | chr1.3:58966827-58966846 | MS.gene44135:intron | 30.0% | |
| GAATCCATTAACTAAATCAC+GGG | - | chr1.3:58967105-58967124 | None:intergenic | 30.0% | |
| GATTTACCCCTGTAAAAAAA+GGG | + | chr1.3:58965732-58965751 | MS.gene44135:intron | 30.0% | |
| GCATCAGTAAATTCAAAAGT+TGG | + | chr1.3:58965861-58965880 | MS.gene44135:intron | 30.0% | |
| GCTTTAACCACATATATAAG+TGG | + | chr1.3:58965569-58965588 | MS.gene44135:intron | 30.0% | |
| GGAATCCATTAACTAAATCA+CGG | - | chr1.3:58967106-58967125 | None:intergenic | 30.0% | |
| GGCTTATTTATTTCAAGACT+AGG | + | chr1.3:58966326-58966345 | MS.gene44135:intron | 30.0% | |
| GGTATGGTTACAGAAAAATT+GGG | + | chr1.3:58966367-58966386 | MS.gene44135:intron | 30.0% | |
| TCATATCAGGTCTAATAAGA+TGG | - | chr1.3:58964448-58964467 | None:intergenic | 30.0% | |
| TGAACAACCACTTATATATG+TGG | - | chr1.3:58965579-58965598 | None:intergenic | 30.0% | |
| TGATTTACCCCTGTAAAAAA+AGG | + | chr1.3:58965731-58965750 | MS.gene44135:intron | 30.0% | |
| TGGTATGGTTACAGAAAAAT+TGG | + | chr1.3:58966366-58966385 | MS.gene44135:intron | 30.0% | |
| TTTGAATTTACTGATGCTAC+TGG | - | chr1.3:58965858-58965877 | None:intergenic | 30.0% | |
| TTTGGATGCTATACATTCTT+TGG | + | chr1.3:58964913-58964932 | MS.gene44135:intron | 30.0% | |
| ! | AAGCTATGTTGATTAATGAG+AGG | + | chr1.3:58965229-58965248 | MS.gene44135:intron | 30.0% |
| ! | ACCATCAGTGTGTTATTATA+TGG | - | chr1.3:58964287-58964306 | None:intergenic | 30.0% |
| ! | GAGAAATGTTTGAAATACCA+TGG | + | chr1.3:58965804-58965823 | MS.gene44135:intron | 30.0% |
| ! | GGACAAAATAATTTGTCAAG+AGG | - | chr1.3:58966855-58966874 | None:intergenic | 30.0% |
| ! | TTATGTTTCCGATTTTTCCA+GGG | + | chr1.3:58967363-58967382 | MS.gene44135:intron | 30.0% |
| ! | TTTATGTTTCCGATTTTTCC+AGG | + | chr1.3:58967362-58967381 | MS.gene44135:intron | 30.0% |
| ! | TTTTGTACTGTTGAATTCTC+TGG | + | chr1.3:58967223-58967242 | MS.gene44135:intron | 30.0% |
| !! | AGTTTGTTAGAGAGATAGTT+AGG | - | chr1.3:58966524-58966543 | None:intergenic | 30.0% |
| !! | GATACGTTATTTCTCTTCAT+TGG | + | chr1.3:58964590-58964609 | MS.gene44135:intron | 30.0% |
| !! | TATAATGGGATATACCCTTT+TGG | + | chr1.3:58967152-58967171 | MS.gene44135:intron | 30.0% |
| !! | TGCATTGTTTTGCAATCAAA+GGG | - | chr1.3:58966400-58966419 | None:intergenic | 30.0% |
| !! | TTCAAGACTAGGAGTATTAT+AGG | + | chr1.3:58966337-58966356 | MS.gene44135:intron | 30.0% |
| !!! | ATTATTAGCTTTTCCGATAG+TGG | + | chr1.3:58965273-58965292 | MS.gene44135:intron | 30.0% |
| !!! | TATATTACAGGGGAGTTTTT+TGG | + | chr1.3:58965774-58965793 | MS.gene44135:intron | 30.0% |
| AAATGACCTATATTACAGGG+GGG | - | chr1.3:58965785-58965766 | None:intergenic | 35.0% | |
| AAATGGTTTCTGCAGTCATT+TGG | + | chr1.3:58964790-58964809 | MS.gene44135:intron | 35.0% | |
| ACAAACATGTTGAGCAAACT+TGG | - | chr1.3:58967258-58967277 | None:intergenic | 35.0% | |
| AGAATATGACTTCTGAGTTC+GGG | + | chr1.3:58965949-58965968 | MS.gene44135:intron | 35.0% | |
| ATAGAATGCCTTCACAACAT+CGG | + | chr1.3:58968615-58968634 | MS.gene44135:CDS | 35.0% | |
| ATGACTGCAGAAACCATTTA+AGG | - | chr1.3:58964789-58964808 | None:intergenic | 35.0% | |
| ATGCCTTAAACGAAAGTTGT+TGG | - | chr1.3:58968588-58968607 | None:intergenic | 35.0% | |
| ATTCCTATATTTAGGGACAG+TGG | + | chr1.3:58967121-58967140 | MS.gene44135:intron | 35.0% | |
| CAGAATATGACTTCTGAGTT+CGG | + | chr1.3:58965948-58965967 | MS.gene44135:intron | 35.0% | |
| CAGAGTAGCTAAGATCATAT+AGG | - | chr1.3:58964164-58964183 | None:intergenic | 35.0% | |
| CCTGTAATATAGGTCATTTC+CGG | + | chr1.3:58965682-58965701 | MS.gene44135:intron | 35.0% | |
| CCTGTAATATAGGTCATTTC+CGG | - | chr1.3:58965701-58965682 | None:intergenic | 35.0% | |
| CGGAAATGACCTATATTACA+GGG | + | chr1.3:58965763-58965782 | MS.gene44135:intron | 35.0% | |
| CGGAAATGACCTATATTACA+GGG | - | chr1.3:58965782-58965763 | None:intergenic | 35.0% | |
| CTAGGCTTGTATTACATTCT+TGG | + | chr1.3:58966636-58966655 | MS.gene44135:intron | 35.0% | |
| GAAATAATTCCAAACGGAAG+AGG | - | chr1.3:58964703-58964722 | None:intergenic | 35.0% | |
| GAAATGACCTATATTACAGG+GGG | - | chr1.3:58965784-58965765 | None:intergenic | 35.0% | |
| GAGAGGCTTATTAAAAGGAA+AGG | - | chr1.3:58967424-58967443 | None:intergenic | 35.0% | |
| GAGGCTTATTAAAAGGAAAG+GGG | - | chr1.3:58967422-58967441 | None:intergenic | 35.0% | |
| GATCCAACAACTTTCGTTTA+AGG | + | chr1.3:58968582-58968601 | MS.gene44135:CDS | 35.0% | |
| GATGCAGATCCTGATATAAT+TGG | + | chr1.3:58967502-58967521 | MS.gene44135:intron | 35.0% | |
| GCATGTTGTCCAATTATATC+AGG | - | chr1.3:58967514-58967533 | None:intergenic | 35.0% | |
| GGAAATGACCTATATTACAG+GGG | + | chr1.3:58965764-58965783 | MS.gene44135:intron | 35.0% | |
| GGAAATGACCTATATTACAG+GGG | - | chr1.3:58965783-58965764 | None:intergenic | 35.0% | |
| GGATCTTCATTATCACAGTT+GGG | + | chr1.3:58967720-58967739 | MS.gene44135:CDS | 35.0% | |
| GGGAATTGTTATAAGCACAA+TGG | + | chr1.3:58965983-58966002 | MS.gene44135:intron | 35.0% | |
| GTAGCCATACTAATGGAAAA+AGG | - | chr1.3:58964351-58964370 | None:intergenic | 35.0% | |
| GTAGTTAGTAGCCATACTAA+TGG | - | chr1.3:58964358-58964377 | None:intergenic | 35.0% | |
| GTAGTTGAAGCTTGTATGAA+TGG | + | chr1.3:58966689-58966708 | MS.gene44135:intron | 35.0% | |
| TAAACGAAAGTTGTTGGATC+TGG | - | chr1.3:58968582-58968601 | None:intergenic | 35.0% | |
| TAAAGTGAGTAAGCAAGCAA+GGG | + | chr1.3:58966162-58966181 | MS.gene44135:intron | 35.0% | |
| TATAAGTGGTTGGAACTTCA+AGG | + | chr1.3:58964668-58964687 | MS.gene44135:intron | 35.0% | |
| TATAGGCTGCATGTCATATT+GGG | + | chr1.3:58966498-58966517 | MS.gene44135:intron | 35.0% | |
| TATCTCAATGTTCGGTCTTA+TGG | + | chr1.3:58967993-58968012 | MS.gene44135:intron | 35.0% | |
| TGACTGCAGAAACCATTTAA+GGG | - | chr1.3:58964788-58964807 | None:intergenic | 35.0% | |
| TGCATAAAAGATCCTGATCT+TGG | - | chr1.3:58967853-58967872 | None:intergenic | 35.0% | |
| TGGATCTTCATTATCACAGT+TGG | + | chr1.3:58967719-58967738 | MS.gene44135:CDS | 35.0% | |
| TTATAGGCTGCATGTCATAT+TGG | + | chr1.3:58966497-58966516 | MS.gene44135:intron | 35.0% | |
| TTTACCCCTGTAAAAAAAGG+GGG | + | chr1.3:58965734-58965753 | MS.gene44135:intron | 35.0% | |
| TTTATGCATCCCTTTCTTGT+TGG | + | chr1.3:58967865-58967884 | MS.gene44135:CDS | 35.0% | |
| TTTCTGTAACCATACCAGTT+GGG | - | chr1.3:58966363-58966382 | None:intergenic | 35.0% | |
| ! | AAATGAAGGCATACAGTAGA+TGG | - | chr1.3:58964480-58964499 | None:intergenic | 35.0% |
| ! | AACAACTTTCGTTTAAGGCA+TGG | + | chr1.3:58968587-58968606 | MS.gene44135:CDS | 35.0% |
| ! | ACTGTGATAATGAAGATCCA+CGG | - | chr1.3:58967719-58967738 | None:intergenic | 35.0% |
| ! | AGACCCCTTTGAATTTTGAA+AGG | + | chr1.3:58966884-58966903 | MS.gene44135:intron | 35.0% |
| ! | CAACAAAGGTCATCTAAAGT+GGG | - | chr1.3:58966204-58966223 | None:intergenic | 35.0% |
| ! | CGTTCCTTTTTCCATTAGTA+TGG | + | chr1.3:58964344-58964363 | MS.gene44135:intron | 35.0% |
| ! | GACTACATTTTCCCCTTAAA+TGG | + | chr1.3:58964773-58964792 | MS.gene44135:intron | 35.0% |
| ! | TGATCTTAGCTACTCTGAAA+TGG | + | chr1.3:58964167-58964186 | MS.gene44135:CDS | 35.0% |
| ! | TTTTCTGTAACCATACCAGT+TGG | - | chr1.3:58966364-58966383 | None:intergenic | 35.0% |
| !! | CACAGGTACATCTTTAGAAT+CGG | + | chr1.3:58967889-58967908 | MS.gene44135:intron | 35.0% |
| !! | CAGCATTGACTTAAAAAGAG+CGG | - | chr1.3:58967446-58967465 | None:intergenic | 35.0% |
| !! | CTGCATTGTTTTGCAATCAA+AGG | - | chr1.3:58966401-58966420 | None:intergenic | 35.0% |
| !! | GCATTGTTTTGCAATCAAAG+GGG | - | chr1.3:58966399-58966418 | None:intergenic | 35.0% |
| !! | TAGAAGTGTCAATGCTTCAT+AGG | - | chr1.3:58964966-58964985 | None:intergenic | 35.0% |
| !!! | AATATTTTAGGACACTGGTC+TGG | - | chr1.3:58965040-58965059 | None:intergenic | 35.0% |
| !!! | ATATTTTAGGACACTGGTCT+GGG | - | chr1.3:58965039-58965058 | None:intergenic | 35.0% |
| !!! | TTTTTTTCTCCAACACTCCT+TGG | + | chr1.3:58965061-58965080 | MS.gene44135:intron | 35.0% |
| AAAACAATGCAGCTCTTCGA+GGG | + | chr1.3:58966409-58966428 | MS.gene44135:intron | 40.0% | |
| AAGCACCTAACTTCAACCAT+TGG | + | chr1.3:58967644-58967663 | MS.gene44135:CDS | 40.0% | |
| AAGTTGTTGGATCTGGTACT+TGG | - | chr1.3:58968575-58968594 | None:intergenic | 40.0% | |
| AATTTACCAGCTGCAACAGA+AGG | + | chr1.3:58966581-58966600 | MS.gene44135:intron | 40.0% | |
| AGGCAGCAATCAAAAGAAGA+GGG | - | chr1.3:58966276-58966295 | None:intergenic | 40.0% | |
| AGGCCTTTATGCAAGTTCTT+CGG | - | chr1.3:58964241-58964260 | None:intergenic | 40.0% | |
| AGTTCCTACCAAAAATGGAC+AGG | - | chr1.3:58966010-58966029 | None:intergenic | 40.0% | |
| AGTTGTTGGATCTGGTACTT+GGG | - | chr1.3:58968574-58968593 | None:intergenic | 40.0% | |
| ATCCTAACTCAACCACAATG+CGG | + | chr1.3:58968285-58968304 | MS.gene44135:CDS | 40.0% | |
| ATGGAGCTGAAACTCATATC+AGG | - | chr1.3:58964461-58964480 | None:intergenic | 40.0% | |
| CAAGCTTCAACTACAATGAC+AGG | - | chr1.3:58966683-58966702 | None:intergenic | 40.0% | |
| CCAACAAAGGTCATCTAAAG+TGG | - | chr1.3:58966205-58966224 | None:intergenic | 40.0% | |
| CCACTTTAGATGACCTTTGT+TGG | + | chr1.3:58966202-58966221 | MS.gene44135:intron | 40.0% | |
| CCATTCCAATGGTTGAAGTT+AGG | - | chr1.3:58967652-58967671 | None:intergenic | 40.0% | |
| CCGGAAATGACCTATATTAC+AGG | + | chr1.3:58965762-58965781 | MS.gene44135:intron | 40.0% | |
| CCGGAAATGACCTATATTAC+AGG | - | chr1.3:58965781-58965762 | None:intergenic | 40.0% | |
| CCTAACTTCAACCATTGGAA+TGG | + | chr1.3:58967649-58967668 | MS.gene44135:CDS | 40.0% | |
| CGAACTCAGAAGTCATATTC+TGG | - | chr1.3:58965950-58965969 | None:intergenic | 40.0% | |
| CTAAAGTGAGTAAGCAAGCA+AGG | + | chr1.3:58966161-58966180 | MS.gene44135:intron | 40.0% | |
| CTACCACTGTCCCTAAATAT+AGG | - | chr1.3:58967127-58967146 | None:intergenic | 40.0% | |
| GACTGCAGAAACCATTTAAG+GGG | - | chr1.3:58964787-58964806 | None:intergenic | 40.0% | |
| GGATGCTATACATTCTTTGG+TGG | + | chr1.3:58964916-58964935 | MS.gene44135:intron | 40.0% | |
| GGGGAAAATGTAGTCAAAAC+AGG | - | chr1.3:58964768-58964787 | None:intergenic | 40.0% | |
| GTCAAGAGGGTCCTATATTT+AGG | - | chr1.3:58966841-58966860 | None:intergenic | 40.0% | |
| GTCATATCCAGAATTCAGCA+TGG | + | chr1.3:58964116-58964135 | MS.gene44135:CDS | 40.0% | |
| TAAGGAAGAAACCACCACTT+TGG | - | chr1.3:58968394-58968413 | None:intergenic | 40.0% | |
| TAGGCTTACTCGAAAGATGA+TGG | - | chr1.3:58964853-58964872 | None:intergenic | 40.0% | |
| TATTATAGGCCCAACTGGTA+TGG | + | chr1.3:58966351-58966370 | MS.gene44135:intron | 40.0% | |
| TCAAAGGGGTCTCAGAAAAA+GGG | - | chr1.3:58966876-58966895 | None:intergenic | 40.0% | |
| TCAACGACAATGAAGGTAAG+TGG | - | chr1.3:58968493-58968512 | None:intergenic | 40.0% | |
| TCTTTACCCCCCTGTAATAT+AGG | + | chr1.3:58965672-58965691 | MS.gene44135:intron | 40.0% | |
| TGATGTTCCTCCTTTAGCAA+AGG | - | chr1.3:58967191-58967210 | None:intergenic | 40.0% | |
| TGGAAACCATTGTGACATGT+TGG | + | chr1.3:58966086-58966105 | MS.gene44135:intron | 40.0% | |
| TGTTTGCAGTAGAGAAAGGA+GGG | - | chr1.3:58967756-58967775 | None:intergenic | 40.0% | |
| TTACAAGAGAAGAACAGGAC+AGG | - | chr1.3:58966299-58966318 | None:intergenic | 40.0% | |
| TTACCCCTGTAAAAAAAGGG+GGG | + | chr1.3:58965735-58965754 | MS.gene44135:intron | 40.0% | |
| TTACGTCCTGAAGAACTTGA+CGG | - | chr1.3:58968419-58968438 | None:intergenic | 40.0% | |
| TTCAAAGGGGTCTCAGAAAA+AGG | - | chr1.3:58966877-58966896 | None:intergenic | 40.0% | |
| TTGACTTAAAAAGAGCGGAG+AGG | - | chr1.3:58967441-58967460 | None:intergenic | 40.0% | |
| TTGCAATTACCTCTTCCGTT+TGG | + | chr1.3:58964691-58964710 | MS.gene44135:intron | 40.0% | |
| TTGCCGAAGAACTTGCATAA+AGG | + | chr1.3:58964235-58964254 | MS.gene44135:intron | 40.0% | |
| TTGGCAGTTCCTACCAAAAA+TGG | - | chr1.3:58966015-58966034 | None:intergenic | 40.0% | |
| ! | ACAATGGACCTGTCCATTTT+TGG | + | chr1.3:58965999-58966018 | MS.gene44135:intron | 40.0% |
| ! | ACGTGTTTGAGATGTGTTCA+AGG | - | chr1.3:58965186-58965205 | None:intergenic | 40.0% |
| ! | ATGGGATATACCCTTTTGGT+TGG | + | chr1.3:58967156-58967175 | MS.gene44135:intron | 40.0% |
| ! | ATGTGTTCAAGGAGGGTATA+GGG | - | chr1.3:58965175-58965194 | None:intergenic | 40.0% |
| ! | CAACAAAGCCTAAGTTGAAC+AGG | - | chr1.3:58964199-58964218 | None:intergenic | 40.0% |
| ! | CGATTCTAAAGATGTACCTG+TGG | - | chr1.3:58967891-58967910 | None:intergenic | 40.0% |
| ! | CTGTTCAACTTAGGCTTTGT+TGG | + | chr1.3:58964197-58964216 | MS.gene44135:intron | 40.0% |
| ! | GCATTGACACTTCTAGCATA+AGG | + | chr1.3:58964971-58964990 | MS.gene44135:intron | 40.0% |
| ! | GTTTGAGATGTGTTCAAGGA+GGG | - | chr1.3:58965182-58965201 | None:intergenic | 40.0% |
| ! | TCGGTAGATGGTTTTCTTCT+TGG | - | chr1.3:58968445-58968464 | None:intergenic | 40.0% |
| ! | TGCAGTCATTTGGAGTTCAT+TGG | + | chr1.3:58964800-58964819 | MS.gene44135:intron | 40.0% |
| ! | TGCTGCATTTGCTGAACATA+CGG | + | chr1.3:58967531-58967550 | MS.gene44135:CDS | 40.0% |
| ! | TGTTTGAGATGTGTTCAAGG+AGG | - | chr1.3:58965183-58965202 | None:intergenic | 40.0% |
| !! | TTGAGTGATTTAGGGCCTTT+TGG | - | chr1.3:58966453-58966472 | None:intergenic | 40.0% |
| !!! | TTAGCTTTTCCGATAGTGGA+TGG | + | chr1.3:58965277-58965296 | MS.gene44135:intron | 40.0% |
| !!! | TTTCCCCCCCTTTTTTTACA+GGG | - | chr1.3:58965742-58965761 | None:intergenic | 40.0% |
| AAAACTACAGGGGGGAAAAC+CGG | - | chr1.3:58965704-58965723 | None:intergenic | 45.0% | |
| AACTCAACTAACACCACCAG+TGG | + | chr1.3:58968355-58968374 | MS.gene44135:CDS | 45.0% | |
| AAGAAACCACCACTTTGGTC+TGG | - | chr1.3:58968389-58968408 | None:intergenic | 45.0% | |
| AAGGTGATAGAGATTCAGGC+TGG | + | chr1.3:58968516-58968535 | MS.gene44135:CDS | 45.0% | |
| AAGTGCTTGGACTCTATCAC+GGG | - | chr1.3:58968240-58968259 | None:intergenic | 45.0% | |
| ACATTACAGTCCGTGTGTTG+TGG | - | chr1.3:58966121-58966140 | None:intergenic | 45.0% | |
| ACTGCAAACAGTCGTCTAGT+TGG | + | chr1.3:58967766-58967785 | MS.gene44135:CDS | 45.0% | |
| AGCCAAGGTGATAGAGATTC+AGG | + | chr1.3:58968512-58968531 | MS.gene44135:CDS | 45.0% | |
| AGCCTGAATCTCTATCACCT+TGG | - | chr1.3:58968517-58968536 | None:intergenic | 45.0% | |
| ATGAAGCAAGGATTCCGACA+TGG | - | chr1.3:58965504-58965523 | None:intergenic | 45.0% | |
| CAAAACAATGCAGCTCTTCG+AGG | + | chr1.3:58966408-58966427 | MS.gene44135:intron | 45.0% | |
| CAGAATTCAGCATGGATGAC+TGG | + | chr1.3:58964124-58964143 | MS.gene44135:CDS | 45.0% | |
| CAGTCATCCATGCTGAATTC+TGG | - | chr1.3:58964126-58964145 | None:intergenic | 45.0% | |
| CGACTGTTTGCAGTAGAGAA+AGG | - | chr1.3:58967760-58967779 | None:intergenic | 45.0% | |
| CTGAAGAACTTGACGGGATA+AGG | - | chr1.3:58968412-58968431 | None:intergenic | 45.0% | |
| CTGTTTGCAGTAGAGAAAGG+AGG | - | chr1.3:58967757-58967776 | None:intergenic | 45.0% | |
| CTTATCCCGTCAAGTTCTTC+AGG | + | chr1.3:58968410-58968429 | MS.gene44135:CDS | 45.0% | |
| GACATGTATCATACGAGCGT+CGG | - | chr1.3:58965010-58965029 | None:intergenic | 45.0% | |
| GACGCTCGTATGATACATGT+CGG | + | chr1.3:58965009-58965028 | MS.gene44135:intron | 45.0% | |
| GAGCGGAGAGGCTTATTAAA+AGG | - | chr1.3:58967429-58967448 | None:intergenic | 45.0% | |
| GAGGCAGCAATCAAAAGAAG+AGG | - | chr1.3:58966277-58966296 | None:intergenic | 45.0% | |
| GGCAGCAATCAAAAGAAGAG+GGG | - | chr1.3:58966275-58966294 | None:intergenic | 45.0% | |
| GGGATGACTAGCAGATGATA+CGG | - | chr1.3:58967557-58967576 | None:intergenic | 45.0% | |
| GGTAACGTCCTGTTCAACTT+AGG | + | chr1.3:58964188-58964207 | MS.gene44135:intron | 45.0% | |
| GGTCCAAAGTAAGCAACGTA+CGG | - | chr1.3:58967583-58967602 | None:intergenic | 45.0% | |
| GGTTCAGATGTACCAAGATC+AGG | + | chr1.3:58967838-58967857 | MS.gene44135:CDS | 45.0% | |
| GTAAAAAAAGGGGGGGAAAC+CGG | + | chr1.3:58965743-58965762 | MS.gene44135:intron | 45.0% | |
| GTCCAAAGTAAGCAACGTAC+GGG | - | chr1.3:58967582-58967601 | None:intergenic | 45.0% | |
| GTTGAGTTAGGATGTTGCTG+CGG | - | chr1.3:58968278-58968297 | None:intergenic | 45.0% | |
| GTTTGCAGTAGAGAAAGGAG+GGG | - | chr1.3:58967755-58967774 | None:intergenic | 45.0% | |
| TACCCCTGTAAAAAAAGGGG+GGG | + | chr1.3:58965736-58965755 | MS.gene44135:intron | 45.0% | |
| TACCTGTGGCCAACAAGAAA+GGG | - | chr1.3:58967877-58967896 | None:intergenic | 45.0% | |
| TACGTCCTGAAGAACTTGAC+GGG | - | chr1.3:58968418-58968437 | None:intergenic | 45.0% | |
| TAGGAAGCTGGCATTTCACT+AGG | - | chr1.3:58967685-58967704 | None:intergenic | 45.0% | |
| TCAATGATCCCTCCTTATCC+TGG | + | chr1.3:58968200-58968219 | MS.gene44135:CDS | 45.0% | |
| TCCTAACTCAACCACAATGC+GGG | + | chr1.3:58968286-58968305 | MS.gene44135:CDS | 45.0% | |
| TCTCTCTCTCTCTCTCTTGA+AGG | + | chr1.3:58967015-58967034 | MS.gene44135:intron | 45.0% | |
| TGATAGAGTCCAAGCACTTC+AGG | + | chr1.3:58968241-58968260 | MS.gene44135:CDS | 45.0% | |
| TTCCTCCTTTAGCAAAGGAG+AGG | - | chr1.3:58967186-58967205 | None:intergenic | 45.0% | |
| TTCGCCTTCCCTGGAAAAAT+CGG | - | chr1.3:58967374-58967393 | None:intergenic | 45.0% | |
| TTCTAGCATAAGGTGTGCTG+CGG | + | chr1.3:58964981-58965000 | MS.gene44135:intron | 45.0% | |
| TTCTCCAACACTCCTTGGAT+CGG | + | chr1.3:58965066-58965085 | MS.gene44135:intron | 45.0% | |
| TTGGAGGAGGATGGATGTAT+TGG | - | chr1.3:58967604-58967623 | None:intergenic | 45.0% | |
| ! | AAAGGTCATCTAAAGTGGGC+TGG | - | chr1.3:58966200-58966219 | None:intergenic | 45.0% |
| ! | GAAGTGCTTGGACTCTATCA+CGG | - | chr1.3:58968241-58968260 | None:intergenic | 45.0% |
| ! | GATAGTATGCCTGAAGTGCT+TGG | - | chr1.3:58968253-58968272 | None:intergenic | 45.0% |
| ! | GATGTGTTCAAGGAGGGTAT+AGG | - | chr1.3:58965176-58965195 | None:intergenic | 45.0% |
| ! | GTTTCCGATTTTTCCAGGGA+AGG | + | chr1.3:58967367-58967386 | MS.gene44135:intron | 45.0% |
| ! | TGATAATGAAGATCCACGGC+AGG | - | chr1.3:58967715-58967734 | None:intergenic | 45.0% |
| !! | AGGAGTATTATAGGCCCAAC+TGG | + | chr1.3:58966346-58966365 | MS.gene44135:intron | 45.0% |
| !! | GAGTTCGGGAGTATTTGCTT+GGG | + | chr1.3:58965963-58965982 | MS.gene44135:intron | 45.0% |
| !! | GATTTAGGGCCTTTTGGCAT+TGG | - | chr1.3:58966447-58966466 | None:intergenic | 45.0% |
| !! | TGAGTTCGGGAGTATTTGCT+TGG | + | chr1.3:58965962-58965981 | MS.gene44135:intron | 45.0% |
| !!! | GTTTCCCCCCCTTTTTTTAC+AGG | - | chr1.3:58965743-58965762 | None:intergenic | 45.0% |
| !!! | TGGACCTGTCCATTTTTGGT+AGG | + | chr1.3:58966003-58966022 | MS.gene44135:intron | 45.0% |
| !!! | TTCCCCCCCTTTTTTTACAG+GGG | - | chr1.3:58965741-58965760 | None:intergenic | 45.0% |
| AAAGTAAGCAACGTACGGGC+AGG | - | chr1.3:58967578-58967597 | None:intergenic | 50.0% | |
| AAGTAAGCAACGTACGGGCA+GGG | - | chr1.3:58967577-58967596 | None:intergenic | 50.0% | |
| ACATCACCAGACCAAAGTGG+TGG | + | chr1.3:58968380-58968399 | MS.gene44135:CDS | 50.0% | |
| ACCCATATGACGACACGTGT+CGG | + | chr1.3:58965096-58965115 | MS.gene44135:intron | 50.0% | |
| ACGTGTCGTCATATGGGTGT+TGG | - | chr1.3:58965094-58965113 | None:intergenic | 50.0% | |
| AGGACACAGACACCACTACA+CGG | - | chr1.3:58965452-58965471 | None:intergenic | 50.0% | |
| AGTCGTGCCATGTTGCCAAA+TGG | - | chr1.3:58964829-58964848 | None:intergenic | 50.0% | |
| ATCCACGGCAGGAAATGTGT+AGG | - | chr1.3:58967704-58967723 | None:intergenic | 50.0% | |
| ATCCCTTTCTTGTTGGCCAC+AGG | + | chr1.3:58967872-58967891 | MS.gene44135:CDS | 50.0% | |
| ATCTGGTACTTGGGTCTGAC+CGG | - | chr1.3:58968565-58968584 | None:intergenic | 50.0% | |
| CAAGAGAAGAACAGGACAGG+AGG | - | chr1.3:58966296-58966315 | None:intergenic | 50.0% | |
| CATCCATCCTCCTCCAATTC+AGG | + | chr1.3:58967607-58967626 | MS.gene44135:CDS | 50.0% | |
| CATTGCTGCCAGGATAAGGA+GGG | - | chr1.3:58968211-58968230 | None:intergenic | 50.0% | |
| CCTTCATTGTCGTTGAGCCA+AGG | + | chr1.3:58968497-58968516 | MS.gene44135:CDS | 50.0% | |
| CCTTGGCTCAACGACAATGA+AGG | - | chr1.3:58968500-58968519 | None:intergenic | 50.0% | |
| CGATGAAAATTCGCCTTCCC+TGG | - | chr1.3:58967383-58967402 | None:intergenic | 50.0% | |
| GAGAGGCAAGCCAACCAAAA+GGG | - | chr1.3:58967169-58967188 | None:intergenic | 50.0% | |
| GCACAGATGAGCCATTCCAA+TGG | - | chr1.3:58967663-58967682 | None:intergenic | 50.0% | |
| GCAGGAAATGTGTAGGAAGC+TGG | - | chr1.3:58967697-58967716 | None:intergenic | 50.0% | |
| GCTTGCCTCTCCTTTGCTAA+AGG | + | chr1.3:58967178-58967197 | MS.gene44135:intron | 50.0% | |
| GGCTGCAAAGCAACCAACAA+AGG | - | chr1.3:58966218-58966237 | None:intergenic | 50.0% | |
| GTACCTGTGGCCAACAAGAA+AGG | - | chr1.3:58967878-58967897 | None:intergenic | 50.0% | |
| GTCGTGCCATGTTGCCAAAT+GGG | - | chr1.3:58964828-58964847 | None:intergenic | 50.0% | |
| TACAGTCCGTGTGTTGTGGA+GGG | - | chr1.3:58966117-58966136 | None:intergenic | 50.0% | |
| TCCCAAGCATGAAAGCGACT+CGG | - | chr1.3:58968464-58968483 | None:intergenic | 50.0% | |
| TCCGACACGTGTCGTCATAT+GGG | - | chr1.3:58965100-58965119 | None:intergenic | 50.0% | |
| TCGTCGGGCAACAGAAGAAA+CGG | - | chr1.3:58968315-58968334 | None:intergenic | 50.0% | |
| TGATACAGCTCCGCCTGAAT+TGG | - | chr1.3:58967623-58967642 | None:intergenic | 50.0% | |
| TGCCCGTACGTTGCTTACTT+TGG | + | chr1.3:58967577-58967596 | MS.gene44135:CDS | 50.0% | |
| TGCCTCTCCTTTGCTAAAGG+AGG | + | chr1.3:58967181-58967200 | MS.gene44135:intron | 50.0% | |
| TTACAGTCCGTGTGTTGTGG+AGG | - | chr1.3:58966118-58966137 | None:intergenic | 50.0% | |
| TTCCTACACATTTCCTGCCG+TGG | + | chr1.3:58967699-58967718 | MS.gene44135:CDS | 50.0% | |
| ! | ACCACTTTGGTCTGGTGATG+TGG | - | chr1.3:58968381-58968400 | None:intergenic | 50.0% |
| ! | ACCGAGTCGCTTTCATGCTT+GGG | + | chr1.3:58968460-58968479 | MS.gene44135:CDS | 50.0% |
| ! | GGAGTTCATTGGTGCCCATT+TGG | + | chr1.3:58964811-58964830 | MS.gene44135:CDS | 50.0% |
| ! | TACCGAGTCGCTTTCATGCT+TGG | + | chr1.3:58968459-58968478 | MS.gene44135:CDS | 50.0% |
| ! | TTGGTGCCCATTTGGCAACA+TGG | + | chr1.3:58964819-58964838 | MS.gene44135:CDS | 50.0% |
| !! | CATGAAAGCGACTCGGTAGA+TGG | - | chr1.3:58968457-58968476 | None:intergenic | 50.0% |
| !!! | GCCTTTTGGCATTGGTAGCT+GGG | - | chr1.3:58966439-58966458 | None:intergenic | 50.0% |
| ACAGTCCGTGTGTTGTGGAG+GGG | - | chr1.3:58966116-58966135 | None:intergenic | 55.0% | |
| ACATCTGAACCACCCCTGAC+TGG | - | chr1.3:58967829-58967848 | None:intergenic | 55.0% | |
| AGTTGAACCACCGTGACTGC+TGG | - | chr1.3:58968339-58968358 | None:intergenic | 55.0% | |
| CCATCCTCCTCCAATTCAGG+CGG | + | chr1.3:58967610-58967629 | MS.gene44135:CDS | 55.0% | |
| CGCTAGTCAAAGGCCAGTCA+GGG | + | chr1.3:58967813-58967832 | MS.gene44135:CDS | 55.0% | |
| CGTCGGGCAACAGAAGAAAC+GGG | - | chr1.3:58968314-58968333 | None:intergenic | 55.0% | |
| GCATTGCTGCCAGGATAAGG+AGG | - | chr1.3:58968212-58968231 | None:intergenic | 55.0% | |
| GCCACATCACCAGACCAAAG+TGG | + | chr1.3:58968377-58968396 | MS.gene44135:CDS | 55.0% | |
| GCCCAGCTACCAATGCCAAA+AGG | + | chr1.3:58966435-58966454 | MS.gene44135:intron | 55.0% | |
| GCCCGCATTGTGGTTGAGTT+AGG | - | chr1.3:58968290-58968309 | None:intergenic | 55.0% | |
| GCTAGTCAAAGGCCAGTCAG+GGG | + | chr1.3:58967814-58967833 | MS.gene44135:CDS | 55.0% | |
| GGAGAGGCAAGCCAACCAAA+AGG | - | chr1.3:58967170-58967189 | None:intergenic | 55.0% | |
| GGATGACTGGACGCATGATG+AGG | + | chr1.3:58964137-58964156 | MS.gene44135:CDS | 55.0% | |
| GTCCGACACGTGTCGTCATA+TGG | - | chr1.3:58965101-58965120 | None:intergenic | 55.0% | |
| GTCGGGCAACAGAAGAAACG+GGG | - | chr1.3:58968313-58968332 | None:intergenic | 55.0% | |
| TACAGCTCCGCCTGAATTGG+AGG | - | chr1.3:58967620-58967639 | None:intergenic | 55.0% | |
| TCGGGCAACAGAAGAAACGG+GGG | - | chr1.3:58968312-58968331 | None:intergenic | 55.0% | |
| ! | CGAGCATTGCTGCCAGGATA+AGG | - | chr1.3:58968215-58968234 | None:intergenic | 55.0% |
| ! | GGAACCGATCCAAGGAGTGT+TGG | - | chr1.3:58965073-58965092 | None:intergenic | 55.0% |
| !! | AGTTGGTGCTGATCAGCCCT+CGG | + | chr1.3:58967783-58967802 | MS.gene44135:CDS | 55.0% |
| !! | CCTGACTGGCCTTTGACTAG+CGG | - | chr1.3:58967815-58967834 | None:intergenic | 55.0% |
| !! | CTGACTGGCCTTTGACTAGC+GGG | - | chr1.3:58967814-58967833 | None:intergenic | 55.0% |
| !! | GCAGTGTCGATGTGCCATGT+CGG | + | chr1.3:58965487-58965506 | MS.gene44135:intron | 55.0% |
| !! | TGGGTGTTGGAACCGATCCA+AGG | - | chr1.3:58965081-58965100 | None:intergenic | 55.0% |
| !!! | GGCCTTTTGGCATTGGTAGC+TGG | - | chr1.3:58966440-58966459 | None:intergenic | 55.0% |
| AGCTCCGCCTGAATTGGAGG+AGG | - | chr1.3:58967617-58967636 | None:intergenic | 60.0% | |
| AGTCAAAGGCCAGTCAGGGG+TGG | + | chr1.3:58967817-58967836 | MS.gene44135:CDS | 60.0% | |
| CCGCCTGAATTGGAGGAGGA+TGG | - | chr1.3:58967613-58967632 | None:intergenic | 60.0% | |
| CCGCTAGTCAAAGGCCAGTC+AGG | + | chr1.3:58967812-58967831 | MS.gene44135:CDS | 60.0% | |
| CGTACCACCAATCCGCGAAC+CGG | + | chr1.3:58968543-58968562 | MS.gene44135:CDS | 60.0% | |
| CTGCAGTTCTGCTGCCAGAG+CGG | + | chr1.3:58968160-58968179 | MS.gene44135:intron | 60.0% | |
| GCCAGAGCGGGTAGCTCAAT+GGG | + | chr1.3:58968173-58968192 | MS.gene44135:CDS | 60.0% | |
| GGCGGGCCAACATGTCACAA+TGG | - | chr1.3:58966095-58966114 | None:intergenic | 60.0% | |
| TGCAGTTCTGCTGCCAGAGC+GGG | + | chr1.3:58968161-58968180 | MS.gene44135:intron | 60.0% | |
| TGCCAGAGCGGGTAGCTCAA+TGG | + | chr1.3:58968172-58968191 | MS.gene44135:CDS | 60.0% | |
| ! | TCTGGTGATGTGGCCACTGG+TGG | - | chr1.3:58968371-58968390 | None:intergenic | 60.0% |
| ! | TGACTAGCGGGTGACACCGA+GGG | - | chr1.3:58967802-58967821 | None:intergenic | 60.0% |
| ! | TGGTCTGGTGATGTGGCCAC+TGG | - | chr1.3:58968374-58968393 | None:intergenic | 60.0% |
| ! | TTGACTAGCGGGTGACACCG+AGG | - | chr1.3:58967803-58967822 | None:intergenic | 60.0% |
| !! | ACTTGGGTCTGACCGGTTCG+CGG | - | chr1.3:58968558-58968577 | None:intergenic | 60.0% |
| !! | CGGTGTCACCCGCTAGTCAA+AGG | + | chr1.3:58967803-58967822 | MS.gene44135:CDS | 60.0% |
| !! | CGGTTCGCGGATTGGTGGTA+CGG | - | chr1.3:58968545-58968564 | None:intergenic | 60.0% |
| AGAAACGGGGGCCCGCATTG+TGG | - | chr1.3:58968300-58968319 | None:intergenic | 65.0% | |
| GCCCATTGAGCTACCCGCTC+TGG | - | chr1.3:58968177-58968196 | None:intergenic | 65.0% | |
| GCTGGGCCTTCTGTTGCAGC+TGG | - | chr1.3:58966590-58966609 | None:intergenic | 65.0% | |
| GTCCGTGTGTTGTGGAGGGG+CGG | - | chr1.3:58966113-58966132 | None:intergenic | 65.0% | |
| TCCGTGTGTTGTGGAGGGGC+GGG | - | chr1.3:58966112-58966131 | None:intergenic | 65.0% | |
| !! | ACCGTGACTGCTGGCTCGTC+GGG | - | chr1.3:58968330-58968349 | None:intergenic | 65.0% |
| !! | CACCGTGACTGCTGGCTCGT+CGG | - | chr1.3:58968331-58968350 | None:intergenic | 65.0% |
| !! | CTGACCGGTTCGCGGATTGG+TGG | - | chr1.3:58968550-58968569 | None:intergenic | 65.0% |
| !! | GGTCTGACCGGTTCGCGGAT+TGG | - | chr1.3:58968553-58968572 | None:intergenic | 65.0% |
| CGACGAGCCAGCAGTCACGG+TGG | + | chr1.3:58968329-58968348 | MS.gene44135:CDS | 70.0% | |
| GCCCGACGAGCCAGCAGTCA+CGG | + | chr1.3:58968326-58968345 | MS.gene44135:CDS | 70.0% | |
| GCCCGCCCCTCCACAACACA+CGG | + | chr1.3:58966108-58966127 | MS.gene44135:intron | 70.0% | |
| ! | CGGGCACGAGCATTGCTGCC+AGG | - | chr1.3:58968221-58968240 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 58964106 | 58968640 | 58964106 | ID=MS.gene44135 |
| chr1.3 | mRNA | 58964106 | 58968640 | 58964106 | ID=MS.gene44135.t1;Parent=MS.gene44135 |
| chr1.3 | exon | 58964106 | 58964188 | 58964106 | ID=MS.gene44135.t1.exon1;Parent=MS.gene44135.t1 |
| chr1.3 | CDS | 58964106 | 58964188 | 58964106 | ID=cds.MS.gene44135.t1;Parent=MS.gene44135.t1 |
| chr1.3 | exon | 58964805 | 58964863 | 58964805 | ID=MS.gene44135.t1.exon2;Parent=MS.gene44135.t1 |
| chr1.3 | CDS | 58964805 | 58964863 | 58964805 | ID=cds.MS.gene44135.t1;Parent=MS.gene44135.t1 |
| chr1.3 | exon | 58967509 | 58967893 | 58967509 | ID=MS.gene44135.t1.exon3;Parent=MS.gene44135.t1 |
| chr1.3 | CDS | 58967509 | 58967893 | 58967509 | ID=cds.MS.gene44135.t1;Parent=MS.gene44135.t1 |
| chr1.3 | exon | 58968166 | 58968640 | 58968166 | ID=MS.gene44135.t1.exon4;Parent=MS.gene44135.t1 |
| chr1.3 | CDS | 58968166 | 58968640 | 58968166 | ID=cds.MS.gene44135.t1;Parent=MS.gene44135.t1 |
| Gene Sequence |
| Protein sequence |
