Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058809.t1 | XP_013468656.1 | 97.1 | 621 | 16 | 2 | 69 | 688 | 512 | 1131 | 0.00E+00 | 1171 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058809.t1 | A8MQL1 | 29.8 | 640 | 336 | 25 | 69 | 687 | 534 | 1081 | 2.4e-34 | 148.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058809.t1 | A0A072VMM4 | 97.1 | 621 | 16 | 2 | 69 | 688 | 512 | 1131 | 0.0e+00 | 1171.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058809 | MS.gene35503 | 0.80534 | 1.40E-49 | -1.69E-46 |
| MS.gene058809 | MS.gene74967 | -0.812611 | 3.89E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058809.t1 | MTR_1g073790 | 97.097 | 689 | 18 | 2 | 1 | 688 | 444 | 1131 | 0.0 | 1373 |
| MS.gene058809.t1 | MTR_1g044450 | 59.040 | 708 | 241 | 18 | 5 | 687 | 452 | 1135 | 0.0 | 692 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058809.t1 | AT1G04300 | 33.805 | 707 | 347 | 30 | 9 | 687 | 206 | 819 | 1.26e-70 | 246 |
| MS.gene058809.t1 | AT1G04300 | 33.805 | 707 | 347 | 30 | 9 | 687 | 383 | 996 | 4.36e-69 | 244 |
| MS.gene058809.t1 | AT1G04300 | 33.805 | 707 | 347 | 30 | 9 | 687 | 441 | 1054 | 5.48e-69 | 244 |
| MS.gene058809.t1 | AT1G04300 | 33.805 | 707 | 347 | 30 | 9 | 687 | 460 | 1073 | 5.73e-69 | 244 |
| MS.gene058809.t1 | AT1G04300 | 33.805 | 707 | 347 | 30 | 9 | 687 | 468 | 1081 | 7.26e-69 | 244 |
| MS.gene058809.t1 | AT1G04300 | 33.805 | 707 | 347 | 30 | 9 | 687 | 430 | 1043 | 1.19e-68 | 243 |
| MS.gene058809.t1 | AT5G43560 | 32.473 | 659 | 337 | 27 | 43 | 687 | 490 | 1054 | 4.22e-52 | 195 |
| MS.gene058809.t1 | AT5G43560 | 32.473 | 659 | 337 | 27 | 43 | 687 | 490 | 1054 | 4.22e-52 | 195 |
Find 209 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAGTACTCCTTTGGTTTC+TGG | 0.069611 | 1.1:-55712350 | MS.gene058809:CDS |
| CATCAACACCATTGTCTTCT+TGG | 0.115326 | 1.1:+55714277 | None:intergenic |
| GAGTAATAATCTGGATAATA+TGG | 0.173668 | 1.1:+55711390 | None:intergenic |
| GAGATACTAGTCCTGTTAAT+TGG | 0.200866 | 1.1:-55714128 | MS.gene058809:CDS |
| CTTGCCTGCTAGGTGACTTC+TGG | 0.216045 | 1.1:+55713899 | None:intergenic |
| ATCTTGCAGTTGAAGTCTTC+TGG | 0.232219 | 1.1:+55712417 | None:intergenic |
| TCTGGTGCTGCAGCAGATGC+TGG | 0.245138 | 1.1:-55713717 | MS.gene058809:CDS |
| TCCAGATTATTACTCAAATA+TGG | 0.260146 | 1.1:-55711382 | MS.gene058809:CDS |
| AGTCTTCTGGATCTCAGTTT+TGG | 0.278484 | 1.1:+55712430 | None:intergenic |
| GTCTGAAAAGCCTGATACTA+TGG | 0.278933 | 1.1:-55714220 | MS.gene058809:CDS |
| GCCACTACACAGTAGATCTA+TGG | 0.288138 | 1.1:-55711880 | MS.gene058809:CDS |
| AAAGACGGCCAGGGCAAGTT+TGG | 0.292974 | 1.1:-55711739 | MS.gene058809:CDS |
| CAATGGTGTTGATGAGAAAA+TGG | 0.325729 | 1.1:-55714268 | MS.gene058809:CDS |
| AATCGACAATTCAGCTTTCC+TGG | 0.326887 | 1.1:-55711681 | MS.gene058809:CDS |
| GAGTTCCCAGCCTGCACATC+CGG | 0.327811 | 1.1:-55711843 | MS.gene058809:CDS |
| GGCCTTCAAATGGTTCTTAG+AGG | 0.352600 | 1.1:-55711329 | None:intergenic |
| ATGGTATAATGTCTGATAAA+AGG | 0.353450 | 1.1:-55714029 | MS.gene058809:CDS |
| GGAGCCATTTGAAGATGTTT+TGG | 0.355022 | 1.1:+55712514 | None:intergenic |
| CATTCTAGCTCGTCATGTTC+AGG | 0.367220 | 1.1:-55712146 | MS.gene058809:CDS |
| TATGTCAATGGACAGGTTGA+TGG | 0.368319 | 1.1:-55711495 | MS.gene058809:CDS |
| GCCATATTTGAGTAATAATC+TGG | 0.370173 | 1.1:+55711381 | None:intergenic |
| CCAACTTCGTCTTTGATGTT+GGG | 0.376546 | 1.1:+55712668 | None:intergenic |
| CTGGTGCTGCAGCAGATGCT+GGG | 0.378446 | 1.1:-55713716 | MS.gene058809:CDS |
| GAAATATCTTCCATAGTATC+AGG | 0.379484 | 1.1:+55714210 | None:intergenic |
| TCAATGGTTATACTGTATTC+AGG | 0.386009 | 1.1:-55711350 | MS.gene058809:CDS |
| CCCAACTTCGTCTTTGATGT+TGG | 0.387162 | 1.1:+55712667 | None:intergenic |
| GATCCTCGACCAGTTCTTGC+AGG | 0.388433 | 1.1:-55711632 | MS.gene058809:CDS |
| CTCCTTTGGTTTCTGGTCCC+AGG | 0.389241 | 1.1:-55712343 | MS.gene058809:CDS |
| AAGACCTTCAAGTACTCCTT+TGG | 0.390403 | 1.1:-55712357 | MS.gene058809:CDS |
| GGGCTGATCATACATGCTTC+TGG | 0.393844 | 1.1:+55711941 | None:intergenic |
| AACTGCTCCTGTGGTCTCAA+TGG | 0.394649 | 1.1:-55712318 | MS.gene058809:CDS |
| GTCCAGTGTGGTGTTCCCTT+TGG | 0.398637 | 1.1:-55712029 | MS.gene058809:CDS |
| TTGCCTGCTAGGTGACTTCT+GGG | 0.399956 | 1.1:+55713900 | None:intergenic |
| TTTGAGAACTTTCAATCCAC+TGG | 0.401010 | 1.1:+55711973 | None:intergenic |
| ATGAGTGCAGCTGGCCGGTT+AGG | 0.409024 | 1.1:-55712266 | MS.gene058809:CDS |
| AGTTACTGAAATGCTTCATC+TGG | 0.409769 | 1.1:-55714163 | MS.gene058809:CDS |
| GGATTCGAGTGTCTGAGAAA+TGG | 0.410400 | 1.1:-55711717 | MS.gene058809:CDS |
| AAAATAGATGGTCGGCCATC+TGG | 0.411364 | 1.1:-55713735 | MS.gene058809:CDS |
| GCATCAGTATCCCAATTAAC+AGG | 0.413324 | 1.1:+55714117 | None:intergenic |
| GATGTTTCATCCAGACAAAA+TGG | 0.421215 | 1.1:-55714048 | MS.gene058809:CDS |
| CTGAACATGACGAGCTAGAA+TGG | 0.421756 | 1.1:+55712147 | None:intergenic |
| AAGACGGCCAGGGCAAGTTT+GGG | 0.423917 | 1.1:-55711738 | MS.gene058809:CDS |
| AAGGCATGCTAGTAACTTGC+GGG | 0.425884 | 1.1:+55711517 | None:intergenic |
| GGTTGGACAAATAAAATAGA+TGG | 0.426465 | 1.1:-55713747 | MS.gene058809:CDS |
| CAAAGTTACCATCATGATCA+TGG | 0.427845 | 1.1:-55711597 | MS.gene058809:CDS |
| AGATACTAGTCCTGTTAATT+GGG | 0.435612 | 1.1:-55714127 | MS.gene058809:CDS |
| ATCAAAATCATGACTTGTAC+AGG | 0.437256 | 1.1:-55711902 | MS.gene058809:CDS |
| ACGCTCGAGCCTGCAAGAAC+TGG | 0.442802 | 1.1:+55711623 | None:intergenic |
| TCCCTCTAAGAACCATTTGA+AGG | 0.443434 | 1.1:+55711327 | None:intergenic |
| TTTCCATTCTATCAGAGCTA+TGG | 0.444905 | 1.1:+55712060 | None:intergenic |
| GGCGATGACACCAAGGTAGA+TGG | 0.445101 | 1.1:+55712095 | None:intergenic |
| ATCCTACAGAAATGCTATCA+TGG | 0.445419 | 1.1:-55712204 | MS.gene058809:CDS |
| ATTCAGCTTTCCTGGAGACT+TGG | 0.445504 | 1.1:-55711673 | MS.gene058809:CDS |
| TGACGCCCGGATGTGCAGGC+TGG | 0.448831 | 1.1:+55711837 | None:intergenic |
| GGGGTTATTAACAAAGAGTC+TGG | 0.449839 | 1.1:-55713696 | MS.gene058809:CDS |
| AAGCTAAATACTTGCCTGCT+AGG | 0.450289 | 1.1:+55713889 | None:intergenic |
| ATCCCATAGCTCTGATAGAA+TGG | 0.452132 | 1.1:-55712063 | MS.gene058809:CDS |
| GACCCGTGGCCACCTGCCAT+TGG | 0.454994 | 1.1:+55711460 | None:intergenic |
| GAGGGAGGAGAGGACTACTA+TGG | 0.459574 | 1.1:-55714316 | MS.gene058809:CDS |
| ATTCTGACGCCCGGATGTGC+AGG | 0.460390 | 1.1:+55711833 | None:intergenic |
| GACGCCCGGATGTGCAGGCT+GGG | 0.460434 | 1.1:+55711838 | None:intergenic |
| TGGATCTTTATCAGTCTGTT+GGG | 0.463001 | 1.1:+55712493 | None:intergenic |
| GATTCGAGTGTCTGAGAAAT+GGG | 0.468823 | 1.1:-55711716 | MS.gene058809:CDS |
| TGAGTGGCGGGTGAGGGATC+AGG | 0.470906 | 1.1:+55712242 | None:intergenic |
| GAGCTATGGGATAGAAAGAT+TGG | 0.472495 | 1.1:+55712074 | None:intergenic |
| TCCTACAGAAATGCTATCAT+GGG | 0.473286 | 1.1:-55712203 | MS.gene058809:CDS |
| ATACTGTTGGAAAGACGGCC+AGG | 0.475970 | 1.1:-55711749 | MS.gene058809:CDS |
| ATGGATCTTTATCAGTCTGT+TGG | 0.478053 | 1.1:+55712492 | None:intergenic |
| AAACCAATGGCAGGTGGCCA+CGG | 0.478223 | 1.1:-55711463 | MS.gene058809:CDS |
| GTGAGGGATCAGGACCTAAC+CGG | 0.481848 | 1.1:+55712252 | None:intergenic |
| GCACGCTCAATGAGTGCAGC+TGG | 0.482026 | 1.1:-55712275 | MS.gene058809:CDS |
| TCCCAGGCCAACTGCTCCTG+TGG | 0.483261 | 1.1:-55712327 | MS.gene058809:CDS |
| AGTAAAGGACAAAGGGAGGG+AGG | 0.483426 | 1.1:-55714331 | MS.gene058809:CDS |
| TTGTTACAAGCCTCAGTTGG+AGG | 0.484425 | 1.1:+55714081 | None:intergenic |
| GTCACCAAAACATCTTCAAA+TGG | 0.485019 | 1.1:-55712518 | MS.gene058809:CDS |
| TTCCATTCTATCAGAGCTAT+GGG | 0.486767 | 1.1:+55712061 | None:intergenic |
| GACTACTGATGGCAAAGAAT+CGG | 0.487737 | 1.1:+55713966 | None:intergenic |
| GACCACAGGAGCAGTTGGCC+TGG | 0.492606 | 1.1:+55712325 | None:intergenic |
| CCCAACATCAAAGACGAAGT+TGG | 0.493887 | 1.1:-55712668 | MS.gene058809:CDS |
| ATTTGACCAGGCGAGCTACT+AGG | 0.496816 | 1.1:+55712581 | None:intergenic |
| CCAACATCAAAGACGAAGTT+GGG | 0.497477 | 1.1:-55712667 | MS.gene058809:CDS |
| ACTAGCATGCCTTATGTCAA+TGG | 0.497740 | 1.1:-55711507 | MS.gene058809:CDS |
| AACTTGTGAGGCAGAGGTGA+AGG | 0.498028 | 1.1:+55712463 | None:intergenic |
| CAATGTGACAACAGCACCCT+CGG | 0.499530 | 1.1:+55713647 | None:intergenic |
| AGTAATAATCTGGATAATAT+GGG | 0.500186 | 1.1:+55711391 | None:intergenic |
| ATGACTATGAGTGGCGGGTG+AGG | 0.500405 | 1.1:+55712235 | None:intergenic |
| ACTGTATTCAGGCCTTCAAA+TGG | 0.506713 | 1.1:-55711339 | MS.gene058809:CDS |
| ATAAGAAAGTAAAGGACAAA+GGG | 0.506925 | 1.1:-55714338 | MS.gene058809:CDS |
| ATGCCTGCATACAATAGATC+AGG | 0.507001 | 1.1:+55711438 | None:intergenic |
| ACCACAGGAGCAGTTGGCCT+GGG | 0.507928 | 1.1:+55712326 | None:intergenic |
| GAGTCTGGAAGTGGAAAGGC+TGG | 0.509160 | 1.1:-55713681 | MS.gene058809:CDS |
| GCTCAATGAGTGCAGCTGGC+CGG | 0.512291 | 1.1:-55712271 | MS.gene058809:CDS |
| CTCGAATCCCAAACTTGCCC+TGG | 0.513071 | 1.1:+55711731 | None:intergenic |
| CTTGAAGGTCTTGAGATAGT+AGG | 0.514525 | 1.1:+55712368 | None:intergenic |
| AACCAATGGCAGGTGGCCAC+GGG | 0.514614 | 1.1:-55711462 | MS.gene058809:CDS |
| TGAAAGTTCTCAAAGAGAAT+CGG | 0.514881 | 1.1:-55711964 | MS.gene058809:CDS |
| CATTGAAGGATCGGTTAAAG+TGG | 0.517473 | 1.1:-55713629 | MS.gene058809:CDS |
| GGGTGCTGTTGTCACATTGA+AGG | 0.520228 | 1.1:-55713643 | MS.gene058809:CDS |
| GAAACCAAAGGAGTACTTGA+AGG | 0.521160 | 1.1:+55712353 | None:intergenic |
| AGGACAAAGGGAGGGAGGAG+AGG | 0.522174 | 1.1:-55714326 | MS.gene058809:CDS |
| AGAAAGTAAAGGACAAAGGG+AGG | 0.524463 | 1.1:-55714335 | MS.gene058809:CDS |
| GTCATGATTGACTCCTACAA+GGG | 0.525195 | 1.1:-55713946 | MS.gene058809:CDS |
| TCCTGTGTTCTCAAGCCAAA+GGG | 0.526908 | 1.1:+55712014 | None:intergenic |
| TCAACCTGTCCATTGACATA+AGG | 0.527082 | 1.1:+55711498 | None:intergenic |
| ATAGCATTTCTGTAGGATTG+AGG | 0.527510 | 1.1:+55712209 | None:intergenic |
| CCTTTGTTACAAGCCTCAGT+TGG | 0.529254 | 1.1:+55714078 | None:intergenic |
| TGAACATGACGAGCTAGAAT+GGG | 0.531234 | 1.1:+55712148 | None:intergenic |
| AGTCCTCCTAGTAGCTCGCC+TGG | 0.531867 | 1.1:-55712587 | MS.gene058809:CDS |
| GGTCAGACTGGCAGCAGTTG+AGG | 0.532385 | 1.1:+55712169 | None:intergenic |
| GATGTGTCTGACTCTGTGGA+TGG | 0.533680 | 1.1:-55714186 | MS.gene058809:CDS |
| TCATTTGCATCCAAGTCTCC+AGG | 0.537872 | 1.1:+55711663 | None:intergenic |
| ACTTGTGAGGCAGAGGTGAA+GGG | 0.538062 | 1.1:+55712464 | None:intergenic |
| ATTAACAAAGAGTCTGGAAG+TGG | 0.538116 | 1.1:-55713690 | MS.gene058809:CDS |
| AAGCCCAGAAGTCACCTAGC+AGG | 0.540234 | 1.1:-55713903 | MS.gene058809:intron |
| CTTGATGATGAGCATACTGT+TGG | 0.540637 | 1.1:-55711762 | MS.gene058809:CDS |
| TTCTGATGTGTCTGACTCTG+TGG | 0.541805 | 1.1:-55714190 | MS.gene058809:CDS |
| TGAGAAAATGGATTCTAATG+AGG | 0.543439 | 1.1:-55714256 | MS.gene058809:CDS |
| GCGGAACAATAAGAAAGTAA+AGG | 0.545734 | 1.1:-55714346 | MS.gene058809:CDS |
| CCAACTGAGGCTTGTAACAA+AGG | 0.549993 | 1.1:-55714078 | MS.gene058809:CDS |
| GCAGGTCGTTTATGATATCA+AGG | 0.551574 | 1.1:+55711784 | None:intergenic |
| GCACTCATTGAGCGTGCAAG+TGG | 0.551953 | 1.1:+55712281 | None:intergenic |
| GCATCTGCTGCAGCACCAGA+TGG | 0.552255 | 1.1:+55713720 | None:intergenic |
| CTTGTGAGGCAGAGGTGAAG+GGG | 0.554636 | 1.1:+55712465 | None:intergenic |
| CCCATAGATCTACTGTGTAG+TGG | 0.556253 | 1.1:+55711879 | None:intergenic |
| CTATTCTCAACCATCTACCT+TGG | 0.556279 | 1.1:-55712105 | MS.gene058809:CDS |
| TGAGAAGCATGTTGTCAGAA+AGG | 0.558629 | 1.1:-55713604 | MS.gene058809:intron |
| AGTTCCCAGCCTGCACATCC+GGG | 0.558647 | 1.1:-55711842 | MS.gene058809:CDS |
| TGACTATGAGTGGCGGGTGA+GGG | 0.560104 | 1.1:+55712236 | None:intergenic |
| CTGTTGTCACATTGAAGGAT+CGG | 0.560558 | 1.1:-55713638 | MS.gene058809:CDS |
| GGAGGACTGACAGGTGAAGA+TGG | 0.561089 | 1.1:+55712602 | None:intergenic |
| GGTCCTGATCTATTGTATGC+AGG | 0.561180 | 1.1:-55711441 | MS.gene058809:CDS |
| CGAGCTAGAATGGGTCAGAC+TGG | 0.561633 | 1.1:+55712157 | None:intergenic |
| CCCCATGATAGCATTTCTGT+AGG | 0.562524 | 1.1:+55712202 | None:intergenic |
| CCACTACACAGTAGATCTAT+GGG | 0.562933 | 1.1:-55711879 | MS.gene058809:CDS |
| ATGGATTGATTACAAACCAA+TGG | 0.563373 | 1.1:-55711476 | MS.gene058809:CDS |
| TGATCATCATTAAGACCAGC+GGG | 0.563699 | 1.1:+55711921 | None:intergenic |
| GAGTCAATCATGACTACTGA+TGG | 0.564583 | 1.1:+55713955 | None:intergenic |
| AATATGGCATGTGGTGTCAA+TGG | 0.568394 | 1.1:-55711366 | MS.gene058809:CDS |
| TTGAGAACTTTCAATCCACT+GGG | 0.570075 | 1.1:+55711974 | None:intergenic |
| GCGTCAGAATCAAGCGTTGG+TGG | 0.570137 | 1.1:-55711820 | MS.gene058809:CDS |
| ATCCTGTGTTCTCAAGCCAA+AGG | 0.572505 | 1.1:+55712013 | None:intergenic |
| CAGTATGCTCATCATCAAGC+AGG | 0.572675 | 1.1:+55711766 | None:intergenic |
| AGTCATGATTGACTCCTACA+AGG | 0.572913 | 1.1:-55713947 | MS.gene058809:CDS |
| ATGATCATGGATTCCGAGGA+GGG | 0.574205 | 1.1:-55711584 | MS.gene058809:CDS |
| GAGCCTGCAAGAACTGGTCG+AGG | 0.574834 | 1.1:+55711629 | None:intergenic |
| AATAAGAAAGTAAAGGACAA+AGG | 0.576095 | 1.1:-55714339 | MS.gene058809:CDS |
| GTTGAGAATAGCTAAAGGAC+GGG | 0.577262 | 1.1:+55712117 | None:intergenic |
| AGCCAAAGGGAACACCACAC+TGG | 0.578402 | 1.1:+55712027 | None:intergenic |
| GGAGGGTATAGCTCGTCCCA+TGG | 0.578451 | 1.1:-55711567 | MS.gene058809:CDS |
| AGTTGTAACTTGTGAGGCAG+AGG | 0.578512 | 1.1:+55712457 | None:intergenic |
| CAACGCTTGATTCTGACGCC+CGG | 0.579981 | 1.1:+55711824 | None:intergenic |
| GAAAGTAAAGGACAAAGGGA+GGG | 0.580363 | 1.1:-55714334 | MS.gene058809:CDS |
| CTCGGAATCCATGATCATGA+TGG | 0.581744 | 1.1:+55711589 | None:intergenic |
| GAGCTACTAGGAGGACTGAC+AGG | 0.582819 | 1.1:+55712593 | None:intergenic |
| ATTGAGACCACAGGAGCAGT+TGG | 0.583534 | 1.1:+55712320 | None:intergenic |
| CATGCCTTATGTCAATGGAC+AGG | 0.583762 | 1.1:-55711502 | MS.gene058809:CDS |
| TTGTTTACTAACATTTGACC+AGG | 0.584367 | 1.1:+55712569 | None:intergenic |
| CACTGCAGGCCAAACAAAAG+CGG | 0.584440 | 1.1:-55714365 | None:intergenic |
| TGAGCATACTGTTGGAAAGA+CGG | 0.584991 | 1.1:-55711754 | MS.gene058809:CDS |
| TCCCTTTGGCTTGAGAACAC+AGG | 0.589775 | 1.1:-55712015 | MS.gene058809:CDS |
| CGTTTATGATATCAAGGTGA+GGG | 0.589791 | 1.1:+55711790 | None:intergenic |
| TACTGTTGGAAAGACGGCCA+GGG | 0.590278 | 1.1:-55711748 | MS.gene058809:CDS |
| CATCATGATCATGGATTCCG+AGG | 0.590749 | 1.1:-55711588 | MS.gene058809:CDS |
| TTGTGAGGCAGAGGTGAAGG+GGG | 0.592920 | 1.1:+55712466 | None:intergenic |
| TAAGTGAATCAAAATGCCCA+TGG | 0.592995 | 1.1:+55711550 | None:intergenic |
| ATGAGAAACACAGAGAATGA+TGG | 0.594896 | 1.1:-55711417 | MS.gene058809:CDS |
| GAGGCTTGTAACAAAGGCAT+AGG | 0.595450 | 1.1:-55714072 | MS.gene058809:CDS |
| GGGACGAGCTATACCCTCCT+CGG | 0.596563 | 1.1:+55711571 | None:intergenic |
| GAGGGTATAGCTCGTCCCAT+GGG | 0.597683 | 1.1:-55711566 | MS.gene058809:CDS |
| CAAAGAGTCTGGAAGTGGAA+AGG | 0.598106 | 1.1:-55713685 | MS.gene058809:CDS |
| GTTTGAACCATTGAGACCAC+AGG | 0.598568 | 1.1:+55712311 | None:intergenic |
| ATTGATTACAAACCAATGGC+AGG | 0.603793 | 1.1:-55711472 | MS.gene058809:CDS |
| TGGTGCTGCAGCAGATGCTG+GGG | 0.604746 | 1.1:-55713715 | MS.gene058809:CDS |
| GGCATAGCATCATGTGACAC+TGG | 0.604879 | 1.1:-55713771 | MS.gene058809:CDS |
| GGTTGAGAATAGCTAAAGGA+CGG | 0.607468 | 1.1:+55712116 | None:intergenic |
| AGCATGTATGATCAGCCCGC+TGG | 0.618096 | 1.1:-55711936 | MS.gene058809:CDS |
| GGAACATGACTATGAGTGGC+GGG | 0.622775 | 1.1:+55712230 | None:intergenic |
| AGATGGTTGAGAATAGCTAA+AGG | 0.624909 | 1.1:+55712112 | None:intergenic |
| ATTGAAGGATCGGTTAAAGT+GGG | 0.624959 | 1.1:-55713628 | MS.gene058809:CDS |
| AGAAGTTCATCCTCCAACTG+AGG | 0.625395 | 1.1:-55714091 | MS.gene058809:CDS |
| GGACGAAGTTGTAACTTGTG+AGG | 0.626603 | 1.1:+55712451 | None:intergenic |
| TAAGGCATGCTAGTAACTTG+CGG | 0.627695 | 1.1:+55711516 | None:intergenic |
| CATCATGTGACACTGGTGGT+TGG | 0.635922 | 1.1:-55713764 | MS.gene058809:CDS |
| TTCTAATGGATAGGACGAGG+AGG | 0.637741 | 1.1:-55712711 | MS.gene058809:intron |
| TATTACTCAAATATGGCATG+TGG | 0.638066 | 1.1:-55711375 | MS.gene058809:CDS |
| CGGGCGTCAGAATCAAGCGT+TGG | 0.638590 | 1.1:-55711823 | MS.gene058809:CDS |
| TCAACTGCAAGATTAACTGA+AGG | 0.641725 | 1.1:-55712407 | MS.gene058809:CDS |
| TTGAGGAACATGACTATGAG+TGG | 0.642794 | 1.1:+55712226 | None:intergenic |
| TCGTTTATGATATCAAGGTG+AGG | 0.643699 | 1.1:+55711789 | None:intergenic |
| AAGTGAATCAAAATGCCCAT+GGG | 0.643942 | 1.1:+55711551 | None:intergenic |
| GGACAAATAAAATAGATGGT+CGG | 0.644190 | 1.1:-55713743 | MS.gene058809:CDS |
| TTGATCATCATTAAGACCAG+CGG | 0.647464 | 1.1:+55711920 | None:intergenic |
| CATGATCATGGATTCCGAGG+AGG | 0.654764 | 1.1:-55711585 | MS.gene058809:CDS |
| AAGAACTGGTCGAGGATCCG+CGG | 0.659961 | 1.1:+55711637 | None:intergenic |
| GATTACAAACCAATGGCAGG+TGG | 0.661607 | 1.1:-55711469 | MS.gene058809:CDS |
| ATCTGTAGAGGTAAGAACAG+AGG | 0.667613 | 1.1:-55713792 | MS.gene058809:intron |
| TGTGAGGCAGAGGTGAAGGG+GGG | 0.668170 | 1.1:+55712467 | None:intergenic |
| AAAGATTGGCGATGACACCA+AGG | 0.670365 | 1.1:+55712088 | None:intergenic |
| AATTGTCGATTTAGCGACTG+CGG | 0.680033 | 1.1:+55711693 | None:intergenic |
| TCATGATTGACTCCTACAAG+GGG | 0.681478 | 1.1:-55713945 | MS.gene058809:CDS |
| CCTACAGAAATGCTATCATG+GGG | 0.685666 | 1.1:-55712202 | MS.gene058809:CDS |
| TGACCAGGCGAGCTACTAGG+AGG | 0.690611 | 1.1:+55712584 | None:intergenic |
| GAGACGAACCAAGAAGACAA+TGG | 0.705109 | 1.1:-55714285 | MS.gene058809:CDS |
| TTGGATGCAAATGATGACCG+CGG | 0.707428 | 1.1:-55711654 | MS.gene058809:CDS |
| AGGAACATGACTATGAGTGG+CGG | 0.716164 | 1.1:+55712229 | None:intergenic |
| ATACAATAGATCAGGACCCG+TGG | 0.724953 | 1.1:+55711446 | None:intergenic |
| GGCCTGGGACCAGAAACCAA+AGG | 0.729032 | 1.1:+55712341 | None:intergenic |
| GAAACTAATGCTGTCCAGTG+TGG | 0.756103 | 1.1:-55712041 | MS.gene058809:CDS |
| ATAGCATCATGTGACACTGG+TGG | 0.779232 | 1.1:-55713768 | MS.gene058809:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTAGTGTTATTTTTTTTTT+TGG | - | chr1.1:55711820-55711839 | MS.gene058809:CDS | 15.0% |
| !!! | TCTTTTTCAAAAGATAAAAA+AGG | - | chr1.1:55712494-55712513 | MS.gene058809:CDS | 15.0% |
| !!! | TTTTTTATCTTTTGAAAAAG+AGG | + | chr1.1:55712495-55712514 | None:intergenic | 15.0% |
| !! | AGTAATAATCTGGATAATAT+GGG | + | chr1.1:55714301-55714320 | None:intergenic | 20.0% |
| !! | GATAAAAAAGGTCTTAAAAA+TGG | - | chr1.1:55712506-55712525 | MS.gene058809:CDS | 20.0% |
| !! | TTCAAAAAAAAAAACTTCTC+TGG | - | chr1.1:55712149-55712168 | MS.gene058809:CDS | 20.0% |
| !!! | ATTTTTTTTTTTGGTGTTGA+CGG | - | chr1.1:55711829-55711848 | MS.gene058809:CDS | 20.0% |
| ! | AAAAAAGGTCTTAAAAATGG+AGG | - | chr1.1:55712509-55712528 | MS.gene058809:CDS | 25.0% |
| ! | AAAAAGGTCTTAAAAATGGA+GGG | - | chr1.1:55712510-55712529 | MS.gene058809:CDS | 25.0% |
| ! | AAAGATACAAGACTTTATAG+TGG | + | chr1.1:55712959-55712978 | None:intergenic | 25.0% |
| ! | AAGAAACAGGAAAAATTGTT+TGG | + | chr1.1:55712284-55712303 | None:intergenic | 25.0% |
| ! | AATAAGAAAGTAAAGGACAA+AGG | - | chr1.1:55711350-55711369 | MS.gene058809:CDS | 25.0% |
| ! | AGAAACAGGAAAAATTGTTT+GGG | + | chr1.1:55712283-55712302 | None:intergenic | 25.0% |
| ! | ATAAGAAAGTAAAGGACAAA+GGG | - | chr1.1:55711351-55711370 | MS.gene058809:CDS | 25.0% |
| ! | ATCCTATTTATGAAGCTAAA+TGG | - | chr1.1:55712911-55712930 | MS.gene058809:intron | 25.0% |
| ! | ATGGTATAATGTCTGATAAA+AGG | - | chr1.1:55711660-55711679 | MS.gene058809:CDS | 25.0% |
| ! | ATTTCCAATAAGAGTAGAAA+TGG | + | chr1.1:55712116-55712135 | None:intergenic | 25.0% |
| ! | CTAAATTGTGAAAAAGAAAC+AGG | + | chr1.1:55712297-55712316 | None:intergenic | 25.0% |
| ! | GAGAAATAAAATAGACAGAA+AGG | + | chr1.1:55712215-55712234 | None:intergenic | 25.0% |
| ! | GAGTAATAATCTGGATAATA+TGG | + | chr1.1:55714302-55714321 | None:intergenic | 25.0% |
| ! | TCCAGATTATTACTCAAATA+TGG | - | chr1.1:55714307-55714326 | MS.gene058809:CDS | 25.0% |
| ! | TGAAGATGAATAGTAAACAA+GGG | + | chr1.1:55712556-55712575 | None:intergenic | 25.0% |
| ! | TTGAAGATGAATAGTAAACA+AGG | + | chr1.1:55712557-55712576 | None:intergenic | 25.0% |
| ! | TTTCCAATAAGAGTAGAAAT+GGG | + | chr1.1:55712115-55712134 | None:intergenic | 25.0% |
| !! | AAACAACTCAGATTCTTTTT+GGG | + | chr1.1:55712730-55712749 | None:intergenic | 25.0% |
| !! | AACCATTTAGCTTCATAAAT+AGG | + | chr1.1:55712916-55712935 | None:intergenic | 25.0% |
| !! | TAAACAACTCAGATTCTTTT+TGG | + | chr1.1:55712731-55712750 | None:intergenic | 25.0% |
| !!! | AAGTCTTGTATCTTTTCTAA+TGG | - | chr1.1:55712964-55712983 | MS.gene058809:intron | 25.0% |
| !!! | CTGTTTCTTTTTCACAATTT+AGG | - | chr1.1:55712295-55712314 | MS.gene058809:CDS | 25.0% |
| !!! | CTTTGAGCAATTTTTAAAAG+AGG | - | chr1.1:55712337-55712356 | MS.gene058809:CDS | 25.0% |
| !!! | GCTATTTGTGATTAGTTTAA+GGG | - | chr1.1:55712818-55712837 | MS.gene058809:intron | 25.0% |
| !!! | TCAGAAGTGTTATTTTGATT+TGG | - | chr1.1:55711866-55711885 | MS.gene058809:CDS | 25.0% |
| !!! | TGCTATTTGTGATTAGTTTA+AGG | - | chr1.1:55712817-55712836 | MS.gene058809:intron | 25.0% |
| !!! | TTGTATCTTTTCTAATGGAT+AGG | - | chr1.1:55712969-55712988 | MS.gene058809:intron | 25.0% |
| !!! | TTTCTTTTTCACAATTTAGG+AGG | - | chr1.1:55712298-55712317 | MS.gene058809:CDS | 25.0% |
| !!! | TTTTTTTTTTTGGTGTTGAC+GGG | - | chr1.1:55711830-55711849 | MS.gene058809:CDS | 25.0% |
| AAATCTTTGTACATCTGTCT+AGG | + | chr1.1:55712676-55712695 | None:intergenic | 30.0% | |
| AGATACTAGTCCTGTTAATT+GGG | - | chr1.1:55711562-55711581 | MS.gene058809:CDS | 30.0% | |
| CAAAAGAGTGGAATCAATTA+AGG | + | chr1.1:55712641-55712660 | None:intergenic | 30.0% | |
| CTCATTGGATGAAATTAATG+TGG | + | chr1.1:55712441-55712460 | None:intergenic | 30.0% | |
| GAAATATCTTCCATAGTATC+AGG | + | chr1.1:55711482-55711501 | None:intergenic | 30.0% | |
| GCCATATTTGAGTAATAATC+TGG | + | chr1.1:55714311-55714330 | None:intergenic | 30.0% | |
| GGACAAATAAAATAGATGGT+CGG | - | chr1.1:55711946-55711965 | MS.gene058809:CDS | 30.0% | |
| GGTTGGACAAATAAAATAGA+TGG | - | chr1.1:55711942-55711961 | MS.gene058809:CDS | 30.0% | |
| TATTACTCAAATATGGCATG+TGG | - | chr1.1:55714314-55714333 | MS.gene058809:CDS | 30.0% | |
| TCAATGGTTATACTGTATTC+AGG | - | chr1.1:55714339-55714358 | MS.gene058809:CDS | 30.0% | |
| TGAAAGTTCTCAAAGAGAAT+CGG | - | chr1.1:55713725-55713744 | MS.gene058809:CDS | 30.0% | |
| TTGTTTACTAACATTTGACC+AGG | + | chr1.1:55713123-55713142 | None:intergenic | 30.0% | |
| ! | AACAACTCAGATTCTTTTTG+GGG | + | chr1.1:55712729-55712748 | None:intergenic | 30.0% |
| ! | AGACATTATACCATTTTGTC+TGG | + | chr1.1:55711654-55711673 | None:intergenic | 30.0% |
| ! | ATCAAAATCATGACTTGTAC+AGG | - | chr1.1:55713787-55713806 | MS.gene058809:CDS | 30.0% |
| ! | ATGGATTGATTACAAACCAA+TGG | - | chr1.1:55714213-55714232 | MS.gene058809:CDS | 30.0% |
| ! | GGCTTGAATATTAAGGTTTT+TGG | - | chr1.1:55712844-55712863 | MS.gene058809:intron | 30.0% |
| ! | TGAGAAAATGGATTCTAATG+AGG | - | chr1.1:55711433-55711452 | MS.gene058809:CDS | 30.0% |
| !! | AAATCATTGTTGATTTGTCC+CGG | + | chr1.1:55712615-55712634 | None:intergenic | 30.0% |
| AAGTGAATCAAAATGCCCAT+GGG | + | chr1.1:55714141-55714160 | None:intergenic | 35.0% | |
| AGATGGTTGAGAATAGCTAA+AGG | + | chr1.1:55713580-55713599 | None:intergenic | 35.0% | |
| AGTTACTGAAATGCTTCATC+TGG | - | chr1.1:55711526-55711545 | MS.gene058809:CDS | 35.0% | |
| ATAGCATTTCTGTAGGATTG+AGG | + | chr1.1:55713483-55713502 | None:intergenic | 35.0% | |
| ATCCTACAGAAATGCTATCA+TGG | - | chr1.1:55713485-55713504 | MS.gene058809:intron | 35.0% | |
| ATGAGAAACACAGAGAATGA+TGG | - | chr1.1:55714272-55714291 | MS.gene058809:CDS | 35.0% | |
| ATGGATCTTTATCAGTCTGT+TGG | + | chr1.1:55713200-55713219 | None:intergenic | 35.0% | |
| ATTAACAAAGAGTCTGGAAG+TGG | - | chr1.1:55711999-55712018 | MS.gene058809:CDS | 35.0% | |
| ATTGAAGGATCGGTTAAAGT+GGG | - | chr1.1:55712061-55712080 | MS.gene058809:CDS | 35.0% | |
| ATTGATTACAAACCAATGGC+AGG | - | chr1.1:55714217-55714236 | MS.gene058809:CDS | 35.0% | |
| CAAAGTTACCATCATGATCA+TGG | - | chr1.1:55714092-55714111 | MS.gene058809:CDS | 35.0% | |
| CGTTTATGATATCAAGGTGA+GGG | + | chr1.1:55713902-55713921 | None:intergenic | 35.0% | |
| GAGATACTAGTCCTGTTAAT+TGG | - | chr1.1:55711561-55711580 | MS.gene058809:CDS | 35.0% | |
| GATGTTTCATCCAGACAAAA+TGG | - | chr1.1:55711641-55711660 | MS.gene058809:CDS | 35.0% | |
| GCGGAACAATAAGAAAGTAA+AGG | - | chr1.1:55711343-55711362 | MS.gene058809:CDS | 35.0% | |
| GTCACCAAAACATCTTCAAA+TGG | - | chr1.1:55713171-55713190 | MS.gene058809:intron | 35.0% | |
| TAAGTGAATCAAAATGCCCA+TGG | + | chr1.1:55714142-55714161 | None:intergenic | 35.0% | |
| TCAACTGCAAGATTAACTGA+AGG | - | chr1.1:55713282-55713301 | MS.gene058809:intron | 35.0% | |
| TCCTACAGAAATGCTATCAT+GGG | - | chr1.1:55713486-55713505 | MS.gene058809:intron | 35.0% | |
| TCGTTTATGATATCAAGGTG+AGG | + | chr1.1:55713903-55713922 | None:intergenic | 35.0% | |
| TCTTTCTAACACTCTCTCAT+TGG | + | chr1.1:55712456-55712475 | None:intergenic | 35.0% | |
| TGGATCTTTATCAGTCTGTT+GGG | + | chr1.1:55713199-55713218 | None:intergenic | 35.0% | |
| TGTCCCATTTCTACTCTTAT+TGG | - | chr1.1:55712109-55712128 | MS.gene058809:CDS | 35.0% | |
| TTCCATTCTATCAGAGCTAT+GGG | + | chr1.1:55713631-55713650 | None:intergenic | 35.0% | |
| TTGAGAACTTTCAATCCACT+GGG | + | chr1.1:55713718-55713737 | None:intergenic | 35.0% | |
| TTGATCATCATTAAGACCAG+CGG | + | chr1.1:55713772-55713791 | None:intergenic | 35.0% | |
| TTTCCATTCTATCAGAGCTA+TGG | + | chr1.1:55713632-55713651 | None:intergenic | 35.0% | |
| TTTGAGAACTTTCAATCCAC+TGG | + | chr1.1:55713719-55713738 | None:intergenic | 35.0% | |
| ! | ACACAGGATGTTTTACAGAA+TGG | - | chr1.1:55713690-55713709 | MS.gene058809:CDS | 35.0% |
| ! | ATGTGGATCCCATTTAAAGT+AGG | + | chr1.1:55712424-55712443 | None:intergenic | 35.0% |
| ! | TGTGGATCCCATTTAAAGTA+GGG | + | chr1.1:55712423-55712442 | None:intergenic | 35.0% |
| !! | AATCATTGTTGATTTGTCCC+GGG | + | chr1.1:55712614-55712633 | None:intergenic | 35.0% |
| !! | CAATGGTGTTGATGAGAAAA+TGG | - | chr1.1:55711421-55711440 | MS.gene058809:CDS | 35.0% |
| !! | CCTTTGGAATAACAAAAGAG+TGG | + | chr1.1:55712653-55712672 | None:intergenic | 35.0% |
| !! | CTTATTGTTCCGCTTTTGTT+TGG | + | chr1.1:55711336-55711355 | None:intergenic | 35.0% |
| !! | TTGGCTCTTTTAATCTGTAG+AGG | - | chr1.1:55711885-55711904 | MS.gene058809:CDS | 35.0% |
| !! | TTGTGATTAGTTTAAGGGAG+AGG | - | chr1.1:55712823-55712842 | MS.gene058809:intron | 35.0% |
| !!! | ATGGGCATTTTGATTCACTT+AGG | - | chr1.1:55714141-55714160 | MS.gene058809:CDS | 35.0% |
| !!! | CCACTCTTTTGTTATTCCAA+AGG | - | chr1.1:55712650-55712669 | MS.gene058809:CDS | 35.0% |
| !!! | GATGTTTTGGTGACATGAAA+AGG | + | chr1.1:55713165-55713184 | None:intergenic | 35.0% |
| !!! | TGGGCATTTTGATTCACTTA+GGG | - | chr1.1:55714142-55714161 | MS.gene058809:CDS | 35.0% |
| !!! | TTTTTGGCCTTGTTGTTGTT+AGG | - | chr1.1:55712860-55712879 | MS.gene058809:intron | 35.0% |
| AAGACCTTCAAGTACTCCTT+TGG | - | chr1.1:55713332-55713351 | MS.gene058809:intron | 40.0% | |
| AAGCTAAATACTTGCCTGCT+AGG | + | chr1.1:55711803-55711822 | None:intergenic | 40.0% | |
| AATCGACAATTCAGCTTTCC+TGG | - | chr1.1:55714008-55714027 | MS.gene058809:CDS | 40.0% | |
| ACTAGCATGCCTTATGTCAA+TGG | - | chr1.1:55714182-55714201 | MS.gene058809:CDS | 40.0% | |
| ACTGTATTCAGGCCTTCAAA+TGG | - | chr1.1:55714350-55714369 | MS.gene058809:CDS | 40.0% | |
| AGAAAGTAAAGGACAAAGGG+AGG | - | chr1.1:55711354-55711373 | MS.gene058809:CDS | 40.0% | |
| AGGGAGAGGCTTGAATATTA+AGG | - | chr1.1:55712837-55712856 | MS.gene058809:intron | 40.0% | |
| AGGTCTTAAAAATGGAGGGA+TGG | - | chr1.1:55712514-55712533 | MS.gene058809:CDS | 40.0% | |
| ATCTGTAGAGGTAAGAACAG+AGG | - | chr1.1:55711897-55711916 | MS.gene058809:CDS | 40.0% | |
| ATCTTGCAGTTGAAGTCTTC+TGG | + | chr1.1:55713275-55713294 | None:intergenic | 40.0% | |
| ATGCCTGCATACAATAGATC+AGG | + | chr1.1:55714254-55714273 | None:intergenic | 40.0% | |
| CATCAACACCATTGTCTTCT+TGG | + | chr1.1:55711415-55711434 | None:intergenic | 40.0% | |
| CATTGAAGGATCGGTTAAAG+TGG | - | chr1.1:55712060-55712079 | MS.gene058809:CDS | 40.0% | |
| CCAACATCAAAGACGAAGTT+GGG | - | chr1.1:55713022-55713041 | MS.gene058809:intron | 40.0% | |
| CCAACTTCGTCTTTGATGTT+GGG | + | chr1.1:55713024-55713043 | None:intergenic | 40.0% | |
| CCACTACACAGTAGATCTAT+GGG | - | chr1.1:55713810-55713829 | MS.gene058809:intron | 40.0% | |
| CCTACAGAAATGCTATCATG+GGG | - | chr1.1:55713487-55713506 | MS.gene058809:intron | 40.0% | |
| CTAACACTCACTCTCTCATT+GGG | - | chr1.1:55712379-55712398 | MS.gene058809:CDS | 40.0% | |
| CTATTCTCAACCATCTACCT+TGG | - | chr1.1:55713584-55713603 | MS.gene058809:intron | 40.0% | |
| CTCATTGGGTGAAATCAATG+TGG | - | chr1.1:55712393-55712412 | MS.gene058809:CDS | 40.0% | |
| CTGTTGTCACATTGAAGGAT+CGG | - | chr1.1:55712051-55712070 | MS.gene058809:CDS | 40.0% | |
| CTTGAAGGTCTTGAGATAGT+AGG | + | chr1.1:55713324-55713343 | None:intergenic | 40.0% | |
| GAAAGTAAAGGACAAAGGGA+GGG | - | chr1.1:55711355-55711374 | MS.gene058809:CDS | 40.0% | |
| GACTACTGATGGCAAAGAAT+CGG | + | chr1.1:55711726-55711745 | None:intergenic | 40.0% | |
| GAGCTATGGGATAGAAAGAT+TGG | + | chr1.1:55713618-55713637 | None:intergenic | 40.0% | |
| GAGTCAATCATGACTACTGA+TGG | + | chr1.1:55711737-55711756 | None:intergenic | 40.0% | |
| GATTCGAGTGTCTGAGAAAT+GGG | - | chr1.1:55713973-55713992 | MS.gene058809:CDS | 40.0% | |
| GCAGGTCGTTTATGATATCA+AGG | + | chr1.1:55713908-55713927 | None:intergenic | 40.0% | |
| GCATCAGTATCCCAATTAAC+AGG | + | chr1.1:55711575-55711594 | None:intergenic | 40.0% | |
| GGGGTTATTAACAAAGAGTC+TGG | - | chr1.1:55711993-55712012 | MS.gene058809:CDS | 40.0% | |
| GGTGTCTATAATGTGAGACA+TGG | + | chr1.1:55712699-55712718 | None:intergenic | 40.0% | |
| GGTTGAGAATAGCTAAAGGA+CGG | + | chr1.1:55713576-55713595 | None:intergenic | 40.0% | |
| GTCTGAAAAGCCTGATACTA+TGG | - | chr1.1:55711469-55711488 | MS.gene058809:CDS | 40.0% | |
| GTTGAGAATAGCTAAAGGAC+GGG | + | chr1.1:55713575-55713594 | None:intergenic | 40.0% | |
| TAAGGCATGCTAGTAACTTG+CGG | + | chr1.1:55714176-55714195 | None:intergenic | 40.0% | |
| TCAACCTGTCCATTGACATA+AGG | + | chr1.1:55714194-55714213 | None:intergenic | 40.0% | |
| TCTAACACTCACTCTCTCAT+TGG | - | chr1.1:55712378-55712397 | MS.gene058809:CDS | 40.0% | |
| TGAAAAAGAGTTCCCCTTGT+AGG | + | chr1.1:55711759-55711778 | None:intergenic | 40.0% | |
| TGAACATGACGAGCTAGAAT+GGG | + | chr1.1:55713544-55713563 | None:intergenic | 40.0% | |
| TGAGCATACTGTTGGAAAGA+CGG | - | chr1.1:55713935-55713954 | MS.gene058809:CDS | 40.0% | |
| TGATCATCATTAAGACCAGC+GGG | + | chr1.1:55713771-55713790 | None:intergenic | 40.0% | |
| TGGATCCCCCTACTTTAAAT+GGG | - | chr1.1:55712413-55712432 | MS.gene058809:CDS | 40.0% | |
| TTGAGGAACATGACTATGAG+TGG | + | chr1.1:55713466-55713485 | None:intergenic | 40.0% | |
| ! | AATATGGCATGTGGTGTCAA+TGG | - | chr1.1:55714323-55714342 | MS.gene058809:CDS | 40.0% |
| ! | AGTCATGATTGACTCCTACA+AGG | - | chr1.1:55711742-55711761 | MS.gene058809:CDS | 40.0% |
| ! | AGTCTTCTGGATCTCAGTTT+TGG | + | chr1.1:55713262-55713281 | None:intergenic | 40.0% |
| ! | GGAGCCATTTGAAGATGTTT+TGG | + | chr1.1:55713178-55713197 | None:intergenic | 40.0% |
| ! | GTCATGATTGACTCCTACAA+GGG | - | chr1.1:55711743-55711762 | MS.gene058809:CDS | 40.0% |
| ! | GTGGATCCCATTTAAAGTAG+GGG | + | chr1.1:55712422-55712441 | None:intergenic | 40.0% |
| ! | TATGTCAATGGACAGGTTGA+TGG | - | chr1.1:55714194-55714213 | MS.gene058809:CDS | 40.0% |
| ! | TCAAGTACTCCTTTGGTTTC+TGG | - | chr1.1:55713339-55713358 | MS.gene058809:intron | 40.0% |
| ! | TCATGATTGACTCCTACAAG+GGG | - | chr1.1:55711744-55711763 | MS.gene058809:CDS | 40.0% |
| ! | TGAGAAGCATGTTGTCAGAA+AGG | - | chr1.1:55712085-55712104 | MS.gene058809:CDS | 40.0% |
| ! | TGGATCCCATTTAAAGTAGG+GGG | + | chr1.1:55712421-55712440 | None:intergenic | 40.0% |
| ! | TTTTACAGAATGGTTCCCAG+TGG | - | chr1.1:55713700-55713719 | MS.gene058809:CDS | 40.0% |
| !! | AACTCAGATTCTTTTTGGGG+TGG | + | chr1.1:55712726-55712745 | None:intergenic | 40.0% |
| !! | AATTGTCGATTTAGCGACTG+CGG | + | chr1.1:55713999-55714018 | None:intergenic | 40.0% |
| !! | ATCCCATAGCTCTGATAGAA+TGG | - | chr1.1:55713626-55713645 | MS.gene058809:CDS | 40.0% |
| !! | CTTGATGATGAGCATACTGT+TGG | - | chr1.1:55713927-55713946 | MS.gene058809:CDS | 40.0% |
| !! | CTTTTCTAATGGATAGGACG+AGG | - | chr1.1:55712975-55712994 | MS.gene058809:intron | 40.0% |
| !! | GAAACCAAAGGAGTACTTGA+AGG | + | chr1.1:55713339-55713358 | None:intergenic | 40.0% |
| !! | TCTAGCTCTCTAAGATGAGA+AGG | + | chr1.1:55712258-55712277 | None:intergenic | 40.0% |
| AAAATAGATGGTCGGCCATC+TGG | - | chr1.1:55711954-55711973 | MS.gene058809:CDS | 45.0% | |
| AAAGATTGGCGATGACACCA+AGG | + | chr1.1:55713604-55713623 | None:intergenic | 45.0% | |
| AGAAGTTCATCCTCCAACTG+AGG | - | chr1.1:55711598-55711617 | MS.gene058809:CDS | 45.0% | |
| AGGAACATGACTATGAGTGG+CGG | + | chr1.1:55713463-55713482 | None:intergenic | 45.0% | |
| ATACAATAGATCAGGACCCG+TGG | + | chr1.1:55714246-55714265 | None:intergenic | 45.0% | |
| ATAGCATCATGTGACACTGG+TGG | - | chr1.1:55711921-55711940 | MS.gene058809:CDS | 45.0% | |
| ATCCTGTGTTCTCAAGCCAA+AGG | + | chr1.1:55713679-55713698 | None:intergenic | 45.0% | |
| ATGATCATGGATTCCGAGGA+GGG | - | chr1.1:55714105-55714124 | MS.gene058809:CDS | 45.0% | |
| ATTCAGCTTTCCTGGAGACT+TGG | - | chr1.1:55714016-55714035 | MS.gene058809:CDS | 45.0% | |
| CAAAGAGTCTGGAAGTGGAA+AGG | - | chr1.1:55712004-55712023 | MS.gene058809:CDS | 45.0% | |
| CAGGCCTTCAAATGGTTCTT+AGG | - | chr1.1:55714358-55714377 | MS.gene058809:CDS | 45.0% | |
| CAGTATGCTCATCATCAAGC+AGG | + | chr1.1:55713926-55713945 | None:intergenic | 45.0% | |
| CATCATGATCATGGATTCCG+AGG | - | chr1.1:55714101-55714120 | MS.gene058809:CDS | 45.0% | |
| CATGCCTTATGTCAATGGAC+AGG | - | chr1.1:55714187-55714206 | MS.gene058809:CDS | 45.0% | |
| CCAACTGAGGCTTGTAACAA+AGG | - | chr1.1:55711611-55711630 | MS.gene058809:CDS | 45.0% | |
| CCCAACATCAAAGACGAAGT+TGG | - | chr1.1:55713021-55713040 | MS.gene058809:intron | 45.0% | |
| CCCAACTTCGTCTTTGATGT+TGG | + | chr1.1:55713025-55713044 | None:intergenic | 45.0% | |
| CCCATAGATCTACTGTGTAG+TGG | + | chr1.1:55713813-55713832 | None:intergenic | 45.0% | |
| CCCCATGATAGCATTTCTGT+AGG | + | chr1.1:55713490-55713509 | None:intergenic | 45.0% | |
| CCTTTGTTACAAGCCTCAGT+TGG | + | chr1.1:55711614-55711633 | None:intergenic | 45.0% | |
| CTCCTTGCTTCAATGTTGTG+TGG | - | chr1.1:55712232-55712251 | MS.gene058809:CDS | 45.0% | |
| CTCGGAATCCATGATCATGA+TGG | + | chr1.1:55714103-55714122 | None:intergenic | 45.0% | |
| CTGAACATGACGAGCTAGAA+TGG | + | chr1.1:55713545-55713564 | None:intergenic | 45.0% | |
| GAAACTAATGCTGTCCAGTG+TGG | - | chr1.1:55713648-55713667 | MS.gene058809:CDS | 45.0% | |
| GAGACGAACCAAGAAGACAA+TGG | - | chr1.1:55711404-55711423 | MS.gene058809:CDS | 45.0% | |
| GATTACAAACCAATGGCAGG+TGG | - | chr1.1:55714220-55714239 | MS.gene058809:CDS | 45.0% | |
| GCCACTACACAGTAGATCTA+TGG | - | chr1.1:55713809-55713828 | MS.gene058809:intron | 45.0% | |
| GCCTTCACCTAACAACAACA+AGG | + | chr1.1:55712870-55712889 | None:intergenic | 45.0% | |
| GCTGGAAAAAATGAGTCCGA+GGG | - | chr1.1:55712026-55712045 | MS.gene058809:CDS | 45.0% | |
| GGATTCGAGTGTCTGAGAAA+TGG | - | chr1.1:55713972-55713991 | MS.gene058809:CDS | 45.0% | |
| GGTCCTGATCTATTGTATGC+AGG | - | chr1.1:55714248-55714267 | MS.gene058809:CDS | 45.0% | |
| GTGGATCCCCCTACTTTAAA+TGG | - | chr1.1:55712412-55712431 | MS.gene058809:CDS | 45.0% | |
| GTTTGAACCATTGAGACCAC+AGG | + | chr1.1:55713381-55713400 | None:intergenic | 45.0% | |
| TCATTTGCATCCAAGTCTCC+AGG | + | chr1.1:55714029-55714048 | None:intergenic | 45.0% | |
| TCCTGTGTTCTCAAGCCAAA+GGG | + | chr1.1:55713678-55713697 | None:intergenic | 45.0% | |
| TGTACATCTGTCTAGGCCTT+TGG | + | chr1.1:55712669-55712688 | None:intergenic | 45.0% | |
| TTCTGATGTGTCTGACTCTG+TGG | - | chr1.1:55711499-55711518 | MS.gene058809:CDS | 45.0% | |
| TTGGATGCAAATGATGACCG+CGG | - | chr1.1:55714035-55714054 | MS.gene058809:CDS | 45.0% | |
| TTGTTACAAGCCTCAGTTGG+AGG | + | chr1.1:55711611-55711630 | None:intergenic | 45.0% | |
| ! | AAGGCATGCTAGTAACTTGC+GGG | + | chr1.1:55714175-55714194 | None:intergenic | 45.0% |
| ! | AGTTGTAACTTGTGAGGCAG+AGG | + | chr1.1:55713235-55713254 | None:intergenic | 45.0% |
| ! | GAGGCTTGTAACAAAGGCAT+AGG | - | chr1.1:55711617-55711636 | MS.gene058809:CDS | 45.0% |
| ! | GGACGAAGTTGTAACTTGTG+AGG | + | chr1.1:55713241-55713260 | None:intergenic | 45.0% |
| ! | TTCTAATGGATAGGACGAGG+AGG | - | chr1.1:55712978-55712997 | MS.gene058809:intron | 45.0% |
| !! | CATTCTAGCTCGTCATGTTC+AGG | - | chr1.1:55713543-55713562 | MS.gene058809:intron | 45.0% |
| !! | GCCTTGTTGTTGTTAGGTGA+AGG | - | chr1.1:55712866-55712885 | MS.gene058809:intron | 45.0% |
| !!! | TCAGATTCTTTTTGGGGTGG+TGG | + | chr1.1:55712723-55712742 | None:intergenic | 45.0% |
| AACTGCTCCTGTGGTCTCAA+TGG | - | chr1.1:55713371-55713390 | MS.gene058809:intron | 50.0% | |
| AACTTGTGAGGCAGAGGTGA+AGG | + | chr1.1:55713229-55713248 | None:intergenic | 50.0% | |
| ACTTGTGAGGCAGAGGTGAA+GGG | + | chr1.1:55713228-55713247 | None:intergenic | 50.0% | |
| AGTAAAGGACAAAGGGAGGG+AGG | - | chr1.1:55711358-55711377 | MS.gene058809:CDS | 50.0% | |
| ATACTGTTGGAAAGACGGCC+AGG | - | chr1.1:55713940-55713959 | MS.gene058809:CDS | 50.0% | |
| ATTGAGACCACAGGAGCAGT+TGG | + | chr1.1:55713372-55713391 | None:intergenic | 50.0% | |
| ATTTGACCAGGCGAGCTACT+AGG | + | chr1.1:55713111-55713130 | None:intergenic | 50.0% | |
| CAATGTGACAACAGCACCCT+CGG | + | chr1.1:55712045-55712064 | None:intergenic | 50.0% | |
| CATCATGTGACACTGGTGGT+TGG | - | chr1.1:55711925-55711944 | MS.gene058809:CDS | 50.0% | |
| CATGATCATGGATTCCGAGG+AGG | - | chr1.1:55714104-55714123 | MS.gene058809:CDS | 50.0% | |
| GATGTGTCTGACTCTGTGGA+TGG | - | chr1.1:55711503-55711522 | MS.gene058809:CDS | 50.0% | |
| GGAACATGACTATGAGTGGC+GGG | + | chr1.1:55713462-55713481 | None:intergenic | 50.0% | |
| GGCATAGCATCATGTGACAC+TGG | - | chr1.1:55711918-55711937 | MS.gene058809:CDS | 50.0% | |
| GGCCACACAACATTGAAGCA+AGG | + | chr1.1:55712237-55712256 | None:intergenic | 50.0% | |
| GGCTGGAAAAAATGAGTCCG+AGG | - | chr1.1:55712025-55712044 | MS.gene058809:CDS | 50.0% | |
| GGGCTGATCATACATGCTTC+TGG | + | chr1.1:55713751-55713770 | None:intergenic | 50.0% | |
| TACTGTTGGAAAGACGGCCA+GGG | - | chr1.1:55713941-55713960 | MS.gene058809:CDS | 50.0% | |
| TTGCCTGCTAGGTGACTTCT+GGG | + | chr1.1:55711792-55711811 | None:intergenic | 50.0% | |
| ! | TCCATCTTGTTTGCACCACC+CGG | - | chr1.1:55712593-55712612 | MS.gene058809:CDS | 50.0% |
| !! | CATTGTTGATTTGTCCCGGG+TGG | + | chr1.1:55712611-55712630 | None:intergenic | 50.0% |
| !! | GGGTGCTGTTGTCACATTGA+AGG | - | chr1.1:55712046-55712065 | MS.gene058809:CDS | 50.0% |
| !! | TCCCTTTGGCTTGAGAACAC+AGG | - | chr1.1:55713674-55713693 | MS.gene058809:CDS | 50.0% |
| !!! | GATTCTTTTTGGGGTGGTGG+TGG | + | chr1.1:55712720-55712739 | None:intergenic | 50.0% |
| AAACCAATGGCAGGTGGCCA+CGG | - | chr1.1:55714226-55714245 | MS.gene058809:CDS | 55.0% | |
| AAAGACGGCCAGGGCAAGTT+TGG | - | chr1.1:55713950-55713969 | MS.gene058809:CDS | 55.0% | |
| AAGAACTGGTCGAGGATCCG+CGG | + | chr1.1:55714055-55714074 | None:intergenic | 55.0% | |
| AAGACGGCCAGGGCAAGTTT+GGG | - | chr1.1:55713951-55713970 | MS.gene058809:CDS | 55.0% | |
| AAGCCCAGAAGTCACCTAGC+AGG | - | chr1.1:55711786-55711805 | MS.gene058809:CDS | 55.0% | |
| AGCATGTATGATCAGCCCGC+TGG | - | chr1.1:55713753-55713772 | MS.gene058809:CDS | 55.0% | |
| AGCCAAAGGGAACACCACAC+TGG | + | chr1.1:55713665-55713684 | None:intergenic | 55.0% | |
| CAACGCTTGATTCTGACGCC+CGG | + | chr1.1:55713868-55713887 | None:intergenic | 55.0% | |
| CGAGCTAGAATGGGTCAGAC+TGG | + | chr1.1:55713535-55713554 | None:intergenic | 55.0% | |
| CTCGAATCCCAAACTTGCCC+TGG | + | chr1.1:55713961-55713980 | None:intergenic | 55.0% | |
| CTTGCCTGCTAGGTGACTTC+TGG | + | chr1.1:55711793-55711812 | None:intergenic | 55.0% | |
| CTTGTGAGGCAGAGGTGAAG+GGG | + | chr1.1:55713227-55713246 | None:intergenic | 55.0% | |
| GAGCTACTAGGAGGACTGAC+AGG | + | chr1.1:55713099-55713118 | None:intergenic | 55.0% | |
| GAGGGAGGAGAGGACTACTA+TGG | - | chr1.1:55711373-55711392 | MS.gene058809:CDS | 55.0% | |
| GAGTCTGGAAGTGGAAAGGC+TGG | - | chr1.1:55712008-55712027 | MS.gene058809:CDS | 55.0% | |
| GATCCTCGACCAGTTCTTGC+AGG | - | chr1.1:55714057-55714076 | MS.gene058809:CDS | 55.0% | |
| GCACTCATTGAGCGTGCAAG+TGG | + | chr1.1:55713411-55713430 | None:intergenic | 55.0% | |
| GGAGGACTGACAGGTGAAGA+TGG | + | chr1.1:55713090-55713109 | None:intergenic | 55.0% | |
| GGCGATGACACCAAGGTAGA+TGG | + | chr1.1:55713597-55713616 | None:intergenic | 55.0% | |
| GTCCAGTGTGGTGTTCCCTT+TGG | - | chr1.1:55713660-55713679 | MS.gene058809:CDS | 55.0% | |
| GTGAGGGATCAGGACCTAAC+CGG | + | chr1.1:55713440-55713459 | None:intergenic | 55.0% | |
| TTGTGAGGCAGAGGTGAAGG+GGG | + | chr1.1:55713226-55713245 | None:intergenic | 55.0% | |
| ! | CCATCTTGTTTGCACCACCC+GGG | - | chr1.1:55712594-55712613 | MS.gene058809:CDS | 55.0% |
| ! | GAGGGTATAGCTCGTCCCAT+GGG | - | chr1.1:55714123-55714142 | MS.gene058809:CDS | 55.0% |
| !! | ATGACTATGAGTGGCGGGTG+AGG | + | chr1.1:55713457-55713476 | None:intergenic | 55.0% |
| !! | CTCCTTTGGTTTCTGGTCCC+AGG | - | chr1.1:55713346-55713365 | MS.gene058809:intron | 55.0% |
| !! | GCGTCAGAATCAAGCGTTGG+TGG | - | chr1.1:55713869-55713888 | MS.gene058809:intron | 55.0% |
| !! | TGACTATGAGTGGCGGGTGA+GGG | + | chr1.1:55713456-55713475 | None:intergenic | 55.0% |
| AACCAATGGCAGGTGGCCAC+GGG | - | chr1.1:55714227-55714246 | MS.gene058809:CDS | 60.0% | |
| ACGCTCGAGCCTGCAAGAAC+TGG | + | chr1.1:55714069-55714088 | None:intergenic | 60.0% | |
| AGGACAAAGGGAGGGAGGAG+AGG | - | chr1.1:55711363-55711382 | MS.gene058809:CDS | 60.0% | |
| AGTCCTCCTAGTAGCTCGCC+TGG | - | chr1.1:55713102-55713121 | MS.gene058809:intron | 60.0% | |
| AGTTCCCAGCCTGCACATCC+GGG | - | chr1.1:55713847-55713866 | MS.gene058809:intron | 60.0% | |
| ATGAGTGCAGCTGGCCGGTT+AGG | - | chr1.1:55713423-55713442 | MS.gene058809:intron | 60.0% | |
| ATTCTGACGCCCGGATGTGC+AGG | + | chr1.1:55713859-55713878 | None:intergenic | 60.0% | |
| CCCGGGTGGTGCAAACAAGA+TGG | + | chr1.1:55712597-55712616 | None:intergenic | 60.0% | |
| CGGGCGTCAGAATCAAGCGT+TGG | - | chr1.1:55713866-55713885 | MS.gene058809:intron | 60.0% | |
| GAGCCTGCAAGAACTGGTCG+AGG | + | chr1.1:55714063-55714082 | None:intergenic | 60.0% | |
| GAGTTCCCAGCCTGCACATC+CGG | - | chr1.1:55713846-55713865 | MS.gene058809:intron | 60.0% | |
| GCACGCTCAATGAGTGCAGC+TGG | - | chr1.1:55713414-55713433 | MS.gene058809:intron | 60.0% | |
| GCATCTGCTGCAGCACCAGA+TGG | + | chr1.1:55711972-55711991 | None:intergenic | 60.0% | |
| GCTCAATGAGTGCAGCTGGC+CGG | - | chr1.1:55713418-55713437 | MS.gene058809:intron | 60.0% | |
| GGCCTGGGACCAGAAACCAA+AGG | + | chr1.1:55713351-55713370 | None:intergenic | 60.0% | |
| GGGACGAGCTATACCCTCCT+CGG | + | chr1.1:55714121-55714140 | None:intergenic | 60.0% | |
| GGTCAGACTGGCAGCAGTTG+AGG | + | chr1.1:55713523-55713542 | None:intergenic | 60.0% | |
| TGACCAGGCGAGCTACTAGG+AGG | + | chr1.1:55713108-55713127 | None:intergenic | 60.0% | |
| TGTGAGGCAGAGGTGAAGGG+GGG | + | chr1.1:55713225-55713244 | None:intergenic | 60.0% | |
| ! | ACCACAGGAGCAGTTGGCCT+GGG | + | chr1.1:55713366-55713385 | None:intergenic | 60.0% |
| ! | GGAGGGTATAGCTCGTCCCA+TGG | - | chr1.1:55714122-55714141 | MS.gene058809:CDS | 60.0% |
| !! | CTGGTGCTGCAGCAGATGCT+GGG | - | chr1.1:55711973-55711992 | MS.gene058809:CDS | 60.0% |
| !! | TCTGGTGCTGCAGCAGATGC+TGG | - | chr1.1:55711972-55711991 | MS.gene058809:CDS | 60.0% |
| !! | TGGTGCTGCAGCAGATGCTG+GGG | - | chr1.1:55711974-55711993 | MS.gene058809:CDS | 60.0% |
| GACCACAGGAGCAGTTGGCC+TGG | + | chr1.1:55713367-55713386 | None:intergenic | 65.0% | |
| GCAGAGGTGAAGGGGGGAGA+TGG | + | chr1.1:55713219-55713238 | None:intergenic | 65.0% | |
| TCCCAGGCCAACTGCTCCTG+TGG | - | chr1.1:55713362-55713381 | MS.gene058809:intron | 65.0% | |
| !! | TGAGTGGCGGGTGAGGGATC+AGG | + | chr1.1:55713450-55713469 | None:intergenic | 65.0% |
| GACCCGTGGCCACCTGCCAT+TGG | + | chr1.1:55714232-55714251 | None:intergenic | 70.0% | |
| GACGCCCGGATGTGCAGGCT+GGG | + | chr1.1:55713854-55713873 | None:intergenic | 70.0% | |
| TGACGCCCGGATGTGCAGGC+TGG | + | chr1.1:55713855-55713874 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 55711332 | 55714379 | 55711332 | ID=MS.gene058809 |
| chr1.1 | mRNA | 55711332 | 55714379 | 55711332 | ID=MS.gene058809.t1;Parent=MS.gene058809 |
| chr1.1 | exon | 55713904 | 55714379 | 55713904 | ID=MS.gene058809.t1.exon1;Parent=MS.gene058809.t1 |
| chr1.1 | CDS | 55713904 | 55714379 | 55713904 | ID=cds.MS.gene058809.t1;Parent=MS.gene058809.t1 |
| chr1.1 | exon | 55713605 | 55713806 | 55713605 | ID=MS.gene058809.t1.exon2;Parent=MS.gene058809.t1 |
| chr1.1 | CDS | 55713605 | 55713806 | 55713605 | ID=cds.MS.gene058809.t1;Parent=MS.gene058809.t1 |
| chr1.1 | exon | 55711332 | 55712720 | 55711332 | ID=MS.gene058809.t1.exon3;Parent=MS.gene058809.t1 |
| chr1.1 | CDS | 55711332 | 55712720 | 55711332 | ID=cds.MS.gene058809.t1;Parent=MS.gene058809.t1 |
| Gene Sequence |
| Protein sequence |
