Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058937.t1 | XP_003597254.2 | 99.1 | 851 | 8 | 0 | 1 | 851 | 1 | 851 | 0.00E+00 | 1462.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058937.t1 | Q8R3Q2 | 31.9 | 505 | 279 | 10 | 1 | 455 | 1 | 490 | 7.9e-59 | 230.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058937.t1 | G7IRT9 | 99.1 | 851 | 8 | 0 | 1 | 851 | 1 | 851 | 0.0e+00 | 1462.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene05026 | MS.gene058937 | 0.804398 | 2.20E-49 | -1.69E-46 |
MS.gene058937 | MS.gene31285 | 0.980738 | 6.45E-151 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058937.t1 | MTR_2g094550 | 99.060 | 851 | 8 | 0 | 1 | 851 | 1 | 851 | 0.0 | 1735 |
MS.gene058937.t1 | MTR_2g094550 | 98.942 | 851 | 8 | 1 | 1 | 851 | 1 | 850 | 0.0 | 1730 |
MS.gene058937.t1 | MTR_2g029960 | 64.478 | 594 | 206 | 3 | 14 | 604 | 4 | 595 | 0.0 | 801 |
MS.gene058937.t1 | MTR_2g029960 | 63.864 | 559 | 198 | 3 | 1 | 558 | 1 | 556 | 0.0 | 749 |
MS.gene058937.t1 | MTR_2g029960 | 60.600 | 467 | 179 | 3 | 141 | 604 | 1 | 465 | 0.0 | 590 |
MS.gene058937.t1 | MTR_2g029960 | 59.629 | 431 | 169 | 3 | 177 | 604 | 1 | 429 | 8.05e-180 | 531 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058937.t1 | AT1G07990 | 66.706 | 853 | 231 | 12 | 1 | 851 | 1 | 802 | 0.0 | 1069 |
MS.gene058937.t1 | AT2G28360 | 62.998 | 854 | 247 | 12 | 1 | 851 | 1 | 788 | 0.0 | 1017 |
MS.gene058937.t1 | AT3G45190 | 60.023 | 853 | 275 | 9 | 1 | 851 | 1 | 789 | 0.0 | 1004 |
MS.gene058937.t1 | AT3G45190 | 58.714 | 809 | 268 | 9 | 45 | 851 | 7 | 751 | 0.0 | 922 |
MS.gene058937.t1 | AT1G07990 | 76.895 | 554 | 124 | 2 | 1 | 554 | 1 | 550 | 0.0 | 868 |
MS.gene058937.t1 | AT1G30470 | 64.145 | 608 | 211 | 4 | 1 | 604 | 1 | 605 | 0.0 | 775 |
MS.gene058937.t1 | AT1G30470 | 64.120 | 602 | 211 | 4 | 5 | 604 | 1 | 599 | 0.0 | 764 |
MS.gene058937.t1 | AT1G30470 | 59.868 | 608 | 194 | 5 | 1 | 604 | 1 | 562 | 0.0 | 693 |
Find 209 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCCTTTAGATATAAAATTTA+TGG | 0.148472 | 2.3:-7420189 | MS.gene058937:CDS |
GTTGATAAGACGACTGTTTA+AGG | 0.152841 | 2.3:+7425451 | None:intergenic |
TTGCATCACATCCATAAAAT+TGG | 0.173077 | 2.3:+7423723 | None:intergenic |
GATAAAACAGATTCTGCTTT+TGG | 0.203309 | 2.3:+7418153 | None:intergenic |
CCAATTGTCTCTGGATTTAC+AGG | 0.219823 | 2.3:+7422889 | None:intergenic |
TGTTAACAATTCGTGTAATA+TGG | 0.225551 | 2.3:+7421502 | None:intergenic |
CTGCAAGATTGTGATTTAAT+TGG | 0.231092 | 2.3:-7421852 | MS.gene058937:CDS |
AGATCTCTTCCTTCATGTTT+TGG | 0.239181 | 2.3:-7426405 | None:intergenic |
CCTGGTCATCACCGAGTCTT+AGG | 0.243722 | 2.3:+7419728 | None:intergenic |
GATTGGAATCACATCCATTA+TGG | 0.249203 | 2.3:-7423885 | MS.gene058937:CDS |
AATCCCACTTACTGAGTTTA+GGG | 0.258444 | 2.3:+7422857 | None:intergenic |
TTCAGTGTGTATTTCTTTGT+TGG | 0.259106 | 2.3:-7422986 | MS.gene058937:CDS |
TGTTTAAGGCCTTGCATTCT+TGG | 0.259835 | 2.3:+7425465 | None:intergenic |
GGCTTCGGAATGAATGAAAA+AGG | 0.272701 | 2.3:+7422935 | None:intergenic |
CGCCAATTGGTTGATTTGAT+TGG | 0.278687 | 2.3:-7423902 | MS.gene058937:CDS |
GCTTGGGAAGCATAGATTAA+AGG | 0.288099 | 2.3:-7422598 | MS.gene058937:intron |
AAATCCCACTTACTGAGTTT+AGG | 0.289394 | 2.3:+7422856 | None:intergenic |
TTTGCCTGATTGGGTGGGAT+GGG | 0.293982 | 2.3:-7418292 | MS.gene058937:CDS |
AAAGGCCTGACTCAAATTAT+TGG | 0.294251 | 2.3:+7420206 | None:intergenic |
GGATTACCAGGTAGCAATTC+CGG | 0.303472 | 2.3:-7418423 | MS.gene058937:CDS |
TGCAAGTGCTGCCAATGATA+TGG | 0.313346 | 2.3:-7418367 | MS.gene058937:CDS |
GTGATAGGCCTTTGCCTGAT+TGG | 0.320494 | 2.3:-7418302 | MS.gene058937:CDS |
TGACCAAGAGGTTGCTGCTC+TGG | 0.330490 | 2.3:-7417854 | MS.gene058937:CDS |
CTTTGCCTGATTGGGTGGGA+TGG | 0.338500 | 2.3:-7418293 | MS.gene058937:CDS |
GAGGAAGATGTTGAATTTGT+AGG | 0.338717 | 2.3:-7418048 | MS.gene058937:CDS |
AATTCAACGATGCGAATTAC+TGG | 0.340079 | 2.3:-7417882 | MS.gene058937:CDS |
CCTTTAGATATAAAATTTAT+GGG | 0.342314 | 2.3:-7420188 | MS.gene058937:CDS |
CTTTCAACTAAGCCTCAAAT+AGG | 0.348326 | 2.3:-7418195 | MS.gene058937:CDS |
AAGTATTGTATTATCATGTT+TGG | 0.361474 | 2.3:-7421907 | MS.gene058937:CDS |
ATGGCAAGCTACCGTGCTTC+AGG | 0.362493 | 2.3:-7420857 | MS.gene058937:CDS |
CTGTAAATCCAGAGACAATT+GGG | 0.365657 | 2.3:-7422888 | MS.gene058937:CDS |
CCTTCAGATATGCAAGTTAC+TGG | 0.370355 | 2.3:-7418264 | MS.gene058937:CDS |
GAACAGATTGTTTATCTGCT+TGG | 0.373694 | 2.3:+7421820 | None:intergenic |
AGCCAGCCAACAAGGCACTA+TGG | 0.374650 | 2.3:+7424275 | None:intergenic |
GTTCAAAGCGCCTCCATTCC+CGG | 0.375694 | 2.3:+7418404 | None:intergenic |
TCCCATAGTGCCTTGTTGGC+TGG | 0.383183 | 2.3:-7424277 | MS.gene058937:CDS |
TCAGACAAGGAAGAGAGTTT+TGG | 0.389244 | 2.3:-7418324 | MS.gene058937:CDS |
CGTTGAATTCCTTCATCCCT+GGG | 0.389372 | 2.3:+7417896 | None:intergenic |
TCGTTGAATTCCTTCATCCC+TGG | 0.390370 | 2.3:+7417895 | None:intergenic |
CCTGTAAATCCAGAGACAAT+TGG | 0.397939 | 2.3:-7422889 | MS.gene058937:CDS |
TTGCCTGATTGGGTGGGATG+GGG | 0.401767 | 2.3:-7418291 | MS.gene058937:CDS |
TGTACCTGCTGCTGGAAAAC+AGG | 0.401919 | 2.3:-7421547 | MS.gene058937:CDS |
GTCACTTATGAATTATGTTC+AGG | 0.402379 | 2.3:-7424098 | MS.gene058937:intron |
TGATAGGCCTTTGCCTGATT+GGG | 0.407584 | 2.3:-7418301 | MS.gene058937:CDS |
ATAAAAGTTTACCTCCATAA+TGG | 0.410036 | 2.3:+7423871 | None:intergenic |
TCGTTCCCATAGTGCCTTGT+TGG | 0.410552 | 2.3:-7424281 | MS.gene058937:CDS |
GGTTGGAGAGGATGAAGAAT+TGG | 0.412364 | 2.3:-7418502 | MS.gene058937:CDS |
AAAGTGTTGCCTACAACATA+TGG | 0.414777 | 2.3:-7422636 | MS.gene058937:CDS |
CCACGTACTGACATGTCTTC+AGG | 0.421842 | 2.3:-7421451 | MS.gene058937:intron |
TCACCCCATCCCACCCAATC+AGG | 0.423936 | 2.3:+7418288 | None:intergenic |
GACATGTCAGTACGTGGCTT+CGG | 0.425921 | 2.3:+7421457 | None:intergenic |
GTCTGTTTACGAACTCCAAC+TGG | 0.428061 | 2.3:-7418647 | MS.gene058937:CDS |
TTTAGCCAATAATTTGAGTC+AGG | 0.431267 | 2.3:-7420211 | MS.gene058937:CDS |
GGAACGATTAGGCTCCAAAA+AGG | 0.431912 | 2.3:+7424297 | None:intergenic |
AGCATTGCCCCAATTGTCTC+TGG | 0.437520 | 2.3:+7422880 | None:intergenic |
CATCACCCATTCTGTCGTCT+TGG | 0.441134 | 2.3:+7418616 | None:intergenic |
GATTACCAGGTAGCAATTCC+GGG | 0.444117 | 2.3:-7418422 | MS.gene058937:CDS |
TCTCTCTTCCGACAGAAATC+TGG | 0.444223 | 2.3:-7421799 | MS.gene058937:intron |
TAACATTCTCAACCACATTA+CGG | 0.444643 | 2.3:+7420833 | None:intergenic |
TCAATCAAATCTTTACTAGT+TGG | 0.445700 | 2.3:+7418120 | None:intergenic |
TGGTGTAGTGAATTATTATA+TGG | 0.446206 | 2.3:+7421939 | None:intergenic |
CGGAAATGAAGCTGCAGAAA+AGG | 0.447243 | 2.3:-7422158 | MS.gene058937:CDS |
CACAGGATGCTGAAAGTAAA+CGG | 0.447488 | 2.3:-7424618 | MS.gene058937:CDS |
GTCCCCTAAAGCGGCAGAAA+AGG | 0.451264 | 2.3:-7417938 | MS.gene058937:CDS |
AACAATTGCTCAACCTGGGC+TGG | 0.452731 | 2.3:+7424664 | None:intergenic |
CAGCCAACTGTACCTGCTGC+TGG | 0.452910 | 2.3:-7421555 | MS.gene058937:CDS |
GAGGGAATAGTCGGGGAAGC+AGG | 0.455511 | 2.3:-7417979 | MS.gene058937:CDS |
TTCCAATCAAATCAACCAAT+TGG | 0.456758 | 2.3:+7423900 | None:intergenic |
TGCATCACATCCATAAAATT+GGG | 0.457380 | 2.3:+7423724 | None:intergenic |
TTGTTGTTTGCCTAATGATT+CGG | 0.459456 | 2.3:-7424129 | MS.gene058937:CDS |
AGCTGTACCATCACTATTTG+AGG | 0.459985 | 2.3:-7418067 | MS.gene058937:CDS |
ACATAAAGTTTCAGCTGCAT+TGG | 0.460813 | 2.3:+7423210 | None:intergenic |
GAATTAGGGCTACCTATTTG+AGG | 0.461468 | 2.3:+7418183 | None:intergenic |
CCTAAGACTCGGTGATGACC+AGG | 0.462555 | 2.3:-7419728 | MS.gene058937:CDS |
TACTGAGAAAGCTATGGAAC+AGG | 0.463183 | 2.3:-7418010 | MS.gene058937:CDS |
TGCTGGAAAACAGGCACCAC+GGG | 0.465587 | 2.3:-7421538 | MS.gene058937:CDS |
AACTTGAACGGTGCTGCTAA+TGG | 0.465600 | 2.3:-7418552 | MS.gene058937:CDS |
TCTGAAGAAACCCATATCAT+TGG | 0.467122 | 2.3:+7418356 | None:intergenic |
CTATTTGAGGCTTAGTTGAA+AGG | 0.470356 | 2.3:+7418196 | None:intergenic |
CTAGTAAAGATTTGATTGAC+GGG | 0.474989 | 2.3:-7418116 | MS.gene058937:CDS |
CTCAATTCTCCATATGTTGT+AGG | 0.477801 | 2.3:+7422627 | None:intergenic |
CACAACATCATCTGAGATGA+TGG | 0.477905 | 2.3:-7418583 | MS.gene058937:CDS |
CCAGGTAGCAATTCCGGGAA+TGG | 0.478811 | 2.3:-7418417 | MS.gene058937:CDS |
TATGGGTTTCTTCAGATTTG+AGG | 0.480427 | 2.3:-7418349 | MS.gene058937:CDS |
TGTTAACAAAATTATTCACT+TGG | 0.480743 | 2.3:-7421487 | MS.gene058937:CDS |
TGATGTCATCTTGAAGACTT+TGG | 0.486713 | 2.3:-7424452 | MS.gene058937:CDS |
TGAAGCTGCAGAAAAGGAAA+TGG | 0.489127 | 2.3:-7422152 | MS.gene058937:CDS |
TCCTATCTTGTAAAGCAGTC+GGG | 0.492489 | 2.3:+7420286 | None:intergenic |
GCCCGACTGCTTTACAAGAT+AGG | 0.492622 | 2.3:-7420287 | MS.gene058937:CDS |
ATCCTATCTTGTAAAGCAGT+CGG | 0.495835 | 2.3:+7420285 | None:intergenic |
CCATTCCCGGAATTGCTACC+TGG | 0.497322 | 2.3:+7418417 | None:intergenic |
AAGATCAATAACTCGTTGAA+TGG | 0.499006 | 2.3:+7422117 | None:intergenic |
ATATAAAATTTATGGGAATG+AGG | 0.499725 | 2.3:-7420181 | MS.gene058937:CDS |
AGAAGAGCTTCTAGATGAAG+AGG | 0.501013 | 2.3:-7425495 | MS.gene058937:CDS |
AACTTCTTCAGTGGATTACC+AGG | 0.501539 | 2.3:-7418435 | MS.gene058937:CDS |
AGCGTAACAATTGCTCAACC+TGG | 0.501870 | 2.3:+7424659 | None:intergenic |
AATACTGAAGACGGCAACCC+AGG | 0.502432 | 2.3:-7417913 | MS.gene058937:CDS |
CTCTGAAAGAGGGAATAGTC+GGG | 0.506411 | 2.3:-7417987 | MS.gene058937:CDS |
TTTGTAGGCGTAGAGTTAGA+AGG | 0.506864 | 2.3:-7418033 | MS.gene058937:CDS |
GACTTTGGTTGATGAAGAAG+AGG | 0.508282 | 2.3:-7424437 | MS.gene058937:intron |
GCACCACGGGCGGGAAACAT+TGG | 0.509528 | 2.3:-7421525 | MS.gene058937:CDS |
ACTAGTAAAGATTTGATTGA+CGG | 0.509913 | 2.3:-7418117 | MS.gene058937:CDS |
ACTCCAGAGCAGCAACCTCT+TGG | 0.510379 | 2.3:+7417851 | None:intergenic |
TGCATTCCAAGACGACAGAA+TGG | 0.511665 | 2.3:-7418622 | MS.gene058937:CDS |
GCATTGGCATTAACTTCAGC+AGG | 0.513752 | 2.3:+7423226 | None:intergenic |
AGAAACAGACTCACCTCCCC+TGG | 0.514825 | 2.3:+7419710 | None:intergenic |
GTACCTCATCATCTCGATCA+TGG | 0.515190 | 2.3:+7419969 | None:intergenic |
GCTCTGAAAGAGGGAATAGT+CGG | 0.517610 | 2.3:-7417988 | MS.gene058937:CDS |
GAGAATTGAGACCTCCGCTT+GGG | 0.518527 | 2.3:-7422614 | MS.gene058937:CDS |
GCTCATACATGTGTTGGCTT+CGG | 0.518793 | 2.3:+7422920 | None:intergenic |
TTGCCTAATGATTCGGAAGA+CGG | 0.519594 | 2.3:-7424122 | MS.gene058937:CDS |
CAACAGTGACGATGAGGTAG+TGG | 0.520715 | 2.3:-7418523 | MS.gene058937:CDS |
TTAGGGACGATATGACTACT+TGG | 0.522762 | 2.3:+7419746 | None:intergenic |
GCATTCCAAGACGACAGAAT+GGG | 0.525757 | 2.3:-7418621 | MS.gene058937:CDS |
AGACGGCAACCCAGGGATGA+AGG | 0.529686 | 2.3:-7417905 | MS.gene058937:CDS |
AAGGCACTATGGGAACGATT+AGG | 0.529939 | 2.3:+7424286 | None:intergenic |
TTTCCAGCAGCAGGTACAGT+TGG | 0.530007 | 2.3:+7421552 | None:intergenic |
CTGGTCATCACCGAGTCTTA+GGG | 0.530018 | 2.3:+7419729 | None:intergenic |
CTGCTTTACAAGATAGGATG+AGG | 0.530195 | 2.3:-7420281 | MS.gene058937:CDS |
GCAAGTGCTGCCAATGATAT+GGG | 0.530880 | 2.3:-7418366 | MS.gene058937:CDS |
AAAGATTTGATTGACGGGGT+TGG | 0.531373 | 2.3:-7418111 | MS.gene058937:CDS |
GCCAGCCAACAAGGCACTAT+GGG | 0.532392 | 2.3:+7424276 | None:intergenic |
GACTCATCATGATCCACAAA+GGG | 0.535504 | 2.3:+7418228 | None:intergenic |
TAGGCCTTTGCCTGATTGGG+TGG | 0.535818 | 2.3:-7418298 | MS.gene058937:CDS |
TGCAAGCATGAATCCCTTTG+TGG | 0.535935 | 2.3:-7418241 | MS.gene058937:CDS |
AAAATAGTGAGTGGAGTGAA+TGG | 0.536200 | 2.3:-7420876 | MS.gene058937:CDS |
ATACAATACTTTCTACATGA+TGG | 0.537091 | 2.3:+7421919 | None:intergenic |
TTTAATTGCTAGAGTAGATG+AGG | 0.537785 | 2.3:+7423171 | None:intergenic |
ACACCGTCTTCCGAATCATT+AGG | 0.540857 | 2.3:+7424119 | None:intergenic |
ATGTTAACCGTTGGGCGTGT+GGG | 0.540885 | 2.3:-7420816 | MS.gene058937:intron |
GACAGAATGGGTGATGCAAA+CGG | 0.542331 | 2.3:-7418609 | MS.gene058937:CDS |
GTTGGCTGGCTACTTTAGCA+AGG | 0.545574 | 2.3:-7424263 | MS.gene058937:intron |
GGAAAACAGGCACCACGGGC+GGG | 0.546553 | 2.3:-7421534 | MS.gene058937:CDS |
TTTGTGGATCATGATGAGTC+TGG | 0.548518 | 2.3:-7418225 | MS.gene058937:CDS |
TATGGAACAGGCTCTGAAAG+AGG | 0.551064 | 2.3:-7417998 | MS.gene058937:CDS |
TGGAAAACAGGCACCACGGG+CGG | 0.553029 | 2.3:-7421535 | MS.gene058937:CDS |
AGATTGTGATTTAATTGGAA+GGG | 0.557726 | 2.3:-7421847 | MS.gene058937:CDS |
ATGATGACGACATTCATGAC+AGG | 0.558327 | 2.3:-7420251 | MS.gene058937:CDS |
TATGGATGTGATGCAATGGT+TGG | 0.558833 | 2.3:-7423716 | MS.gene058937:CDS |
CAGATTTGAGGCATCAGACA+AGG | 0.559030 | 2.3:-7418337 | MS.gene058937:CDS |
GGTTGAGAATGTTAACCGTT+GGG | 0.559190 | 2.3:-7420824 | MS.gene058937:CDS |
AGAAGGTACTGAGAAAGCTA+TGG | 0.560463 | 2.3:-7418016 | MS.gene058937:CDS |
TATCAACAATCATCTCAAGC+AGG | 0.565593 | 2.3:+7423683 | None:intergenic |
AATGTTAACCGTTGGGCGTG+TGG | 0.566434 | 2.3:-7420817 | MS.gene058937:CDS |
GAAAAGGAAAATACTGAAGA+CGG | 0.566673 | 2.3:-7417922 | MS.gene058937:CDS |
AAGATTGTGATTTAATTGGA+AGG | 0.568905 | 2.3:-7421848 | MS.gene058937:CDS |
TGGCCAATGTTTCCCGCCCG+TGG | 0.568977 | 2.3:+7421522 | None:intergenic |
TCTGGATTTACAGGAATATG+TGG | 0.570047 | 2.3:+7422898 | None:intergenic |
AAAATCTCGCAGGCAATGAA+CGG | 0.571625 | 2.3:+7424487 | None:intergenic |
GTCTTGGAATGCAAACCAGT+TGG | 0.574044 | 2.3:+7418632 | None:intergenic |
GGAGAATTGAGACCTCCGCT+TGG | 0.574108 | 2.3:-7422615 | MS.gene058937:CDS |
AGGCCTTTGCCTGATTGGGT+GGG | 0.575500 | 2.3:-7418297 | MS.gene058937:CDS |
CGTTTACTTTCAGCATCCTG+TGG | 0.581091 | 2.3:+7424619 | None:intergenic |
TGGGAATGAGGATAATGAAG+AGG | 0.583867 | 2.3:-7420169 | MS.gene058937:intron |
CACATTACGGTCCTGAAGCA+CGG | 0.590677 | 2.3:+7420846 | None:intergenic |
TTACTTTCAGCATCCTGTGG+TGG | 0.592020 | 2.3:+7424622 | None:intergenic |
ATGGAACAGGCTCTGAAAGA+GGG | 0.594568 | 2.3:-7417997 | MS.gene058937:CDS |
GGAAGTAATCCAAGAATGCA+AGG | 0.596486 | 2.3:-7425474 | MS.gene058937:CDS |
AGTGACGATGAGGTAGTGGT+TGG | 0.598469 | 2.3:-7418519 | MS.gene058937:CDS |
ATACTGAAGACGGCAACCCA+GGG | 0.598992 | 2.3:-7417912 | MS.gene058937:CDS |
GGTAGCAATTCCGGGAATGG+AGG | 0.599278 | 2.3:-7418414 | MS.gene058937:CDS |
CTGCTGGAAAACAGGCACCA+CGG | 0.599672 | 2.3:-7421539 | MS.gene058937:CDS |
AAGAAACGTGTCCCCTAAAG+CGG | 0.599693 | 2.3:-7417947 | MS.gene058937:CDS |
GAAAAGGAAATGGTCAACTC+AGG | 0.600458 | 2.3:-7422142 | MS.gene058937:CDS |
GAGCTTACCCACACGCCCAA+CGG | 0.603966 | 2.3:+7420809 | None:intergenic |
TGTAGGCAACACTTTCTCAT+CGG | 0.605404 | 2.3:+7422644 | None:intergenic |
CCAGTAACTTGCATATCTGA+AGG | 0.606669 | 2.3:+7418264 | None:intergenic |
TCCATGTACCAGATTTCTGT+CGG | 0.606949 | 2.3:+7421791 | None:intergenic |
TCTAGCACAAACTTCTTCAG+TGG | 0.607094 | 2.3:-7418444 | MS.gene058937:CDS |
CGATGAGGTAGTGGTTGGAG+AGG | 0.610100 | 2.3:-7418514 | MS.gene058937:CDS |
CATCCCACCCAATCAGGCAA+AGG | 0.611348 | 2.3:+7418294 | None:intergenic |
CGTGCTTCAGGACCGTAATG+TGG | 0.613132 | 2.3:-7420845 | MS.gene058937:CDS |
AATCTATGCTTCCCAAGCGG+AGG | 0.614776 | 2.3:+7422603 | None:intergenic |
GCTAAAGTAGCCAGCCAACA+AGG | 0.619095 | 2.3:+7424267 | None:intergenic |
ACATCTTCCTCAAATAGTGA+TGG | 0.621746 | 2.3:+7418060 | None:intergenic |
TTACTGGAGGGTTGACCAAG+AGG | 0.625304 | 2.3:-7417866 | MS.gene058937:CDS |
GCGTAACAATTGCTCAACCT+GGG | 0.627719 | 2.3:+7424660 | None:intergenic |
GTCATATCGTCCCTAAGACT+CGG | 0.627979 | 2.3:-7419739 | MS.gene058937:CDS |
CATTATCGAAGAACCACCAC+AGG | 0.628589 | 2.3:-7424635 | MS.gene058937:CDS |
TCAACGATGCGAATTACTGG+AGG | 0.629037 | 2.3:-7417879 | MS.gene058937:CDS |
TATGTGGCTCATACATGTGT+TGG | 0.633097 | 2.3:+7422914 | None:intergenic |
TGCTTTACAAGATAGGATGA+GGG | 0.635330 | 2.3:-7420280 | MS.gene058937:CDS |
CAATTAAACTCTCAAGCCCG+AGG | 0.636822 | 2.3:-7423156 | MS.gene058937:intron |
CAACCATGATCGAGATGATG+AGG | 0.637857 | 2.3:-7419972 | MS.gene058937:intron |
CTAAGACTCGGTGATGACCA+GGG | 0.641900 | 2.3:-7419727 | MS.gene058937:CDS |
ACATGCAGGAAAATAGTGAG+TGG | 0.642610 | 2.3:-7420885 | MS.gene058937:intron |
TAGTTTGAGAGATCCAGCCC+AGG | 0.645073 | 2.3:-7424677 | MS.gene058937:CDS |
TTGTCTTTGTTGCAGGAACG+TGG | 0.646171 | 2.3:-7419995 | MS.gene058937:intron |
TGGTTGAGAATGTTAACCGT+TGG | 0.646731 | 2.3:-7420825 | MS.gene058937:CDS |
GACTCGGTGATGACCAGGGG+AGG | 0.648705 | 2.3:-7419723 | MS.gene058937:intron |
CAACGATGCGAATTACTGGA+GGG | 0.651888 | 2.3:-7417878 | MS.gene058937:CDS |
TGGAATCACATCCATTATGG+AGG | 0.652991 | 2.3:-7423882 | MS.gene058937:intron |
ACACTGAAAGTGAGTTCACA+AGG | 0.657279 | 2.3:+7423001 | None:intergenic |
TAGGGACGATATGACTACTT+GGG | 0.660146 | 2.3:+7419747 | None:intergenic |
TAAGACTCGGTGATGACCAG+GGG | 0.660396 | 2.3:-7419726 | MS.gene058937:CDS |
AGACTCATCATGATCCACAA+AGG | 0.661642 | 2.3:+7418227 | None:intergenic |
CCTGAAGACATGTCAGTACG+TGG | 0.671686 | 2.3:+7421451 | None:intergenic |
TTGAACGGTGCTGCTAATGG+TGG | 0.675103 | 2.3:-7418549 | MS.gene058937:CDS |
CCATAAAATTGGGATACACG+TGG | 0.678987 | 2.3:+7423734 | None:intergenic |
TCTGAAAGAGGGAATAGTCG+GGG | 0.679218 | 2.3:-7417986 | MS.gene058937:CDS |
TGGTAACAACAGTGACGATG+AGG | 0.679471 | 2.3:-7418529 | MS.gene058937:CDS |
TGATGACGACATTCATGACA+GGG | 0.680526 | 2.3:-7420250 | MS.gene058937:CDS |
GGTGGAGGCTATATTAGACA+AGG | 0.680550 | 2.3:-7425531 | MS.gene058937:CDS |
TTTAATCTATGCTTCCCAAG+CGG | 0.696313 | 2.3:+7422600 | None:intergenic |
TAGTAAAGATTTGATTGACG+GGG | 0.702421 | 2.3:-7418115 | MS.gene058937:CDS |
TTGCAGAAGATGATCAACAA+CGG | 0.704666 | 2.3:+7421869 | None:intergenic |
TGTAAATCCAGAGACAATTG+GGG | 0.704949 | 2.3:-7422887 | MS.gene058937:CDS |
AGAATGGGTGATGCAAACGG+AGG | 0.736988 | 2.3:-7418606 | MS.gene058937:CDS |
ATGGATGAGATAAACTTGAA+CGG | 0.744743 | 2.3:-7418564 | MS.gene058937:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 7417849 | 7426413 | 7417849 | ID=MS.gene058937 |
chr2.3 | mRNA | 7417849 | 7426413 | 7417849 | ID=MS.gene058937.t1;Parent=MS.gene058937 |
chr2.3 | exon | 7426375 | 7426413 | 7426375 | ID=MS.gene058937.t1.exon1;Parent=MS.gene058937.t1 |
chr2.3 | CDS | 7426375 | 7426413 | 7426375 | ID=cds.MS.gene058937.t1;Parent=MS.gene058937.t1 |
chr2.3 | exon | 7425449 | 7425552 | 7425449 | ID=MS.gene058937.t1.exon2;Parent=MS.gene058937.t1 |
chr2.3 | CDS | 7425449 | 7425552 | 7425449 | ID=cds.MS.gene058937.t1;Parent=MS.gene058937.t1 |
chr2.3 | exon | 7424610 | 7424696 | 7424610 | ID=MS.gene058937.t1.exon3;Parent=MS.gene058937.t1 |
chr2.3 | CDS | 7424610 | 7424696 | 7424610 | ID=cds.MS.gene058937.t1;Parent=MS.gene058937.t1 |
chr2.3 | exon | 7424438 | 7424513 | 7424438 | ID=MS.gene058937.t1.exon4;Parent=MS.gene058937.t1 |
chr2.3 | CDS | 7424438 | 7424513 | 7424438 | ID=cds.MS.gene058937.t1;Parent=MS.gene058937.t1 |
chr2.3 | exon | 7424264 | 7424338 | 7424264 | ID=MS.gene058937.t1.exon5;Parent=MS.gene058937.t1 |
chr2.3 | CDS | 7424264 | 7424338 | 7424264 | ID=cds.MS.gene058937.t1;Parent=MS.gene058937.t1 |
chr2.3 | exon | 7424099 | 7424152 | 7424099 | ID=MS.gene058937.t1.exon6;Parent=MS.gene058937.t1 |
chr2.3 | CDS | 7424099 | 7424152 | 7424099 | ID=cds.MS.gene058937.t1;Parent=MS.gene058937.t1 |
chr2.3 | exon | 7423883 | 7423942 | 7423883 | ID=MS.gene058937.t1.exon7;Parent=MS.gene058937.t1 |
chr2.3 | CDS | 7423883 | 7423942 | 7423883 | ID=cds.MS.gene058937.t1;Parent=MS.gene058937.t1 |
chr2.3 | exon | 7423669 | 7423785 | 7423669 | ID=MS.gene058937.t1.exon8;Parent=MS.gene058937.t1 |
chr2.3 | CDS | 7423669 | 7423785 | 7423669 | ID=cds.MS.gene058937.t1;Parent=MS.gene058937.t1 |
chr2.3 | exon | 7423157 | 7423251 | 7423157 | ID=MS.gene058937.t1.exon9;Parent=MS.gene058937.t1 |
chr2.3 | CDS | 7423157 | 7423251 | 7423157 | ID=cds.MS.gene058937.t1;Parent=MS.gene058937.t1 |
chr2.3 | exon | 7422869 | 7423077 | 7422869 | ID=MS.gene058937.t1.exon10;Parent=MS.gene058937.t1 |
chr2.3 | CDS | 7422869 | 7423077 | 7422869 | ID=cds.MS.gene058937.t1;Parent=MS.gene058937.t1 |
chr2.3 | exon | 7422599 | 7422696 | 7422599 | ID=MS.gene058937.t1.exon11;Parent=MS.gene058937.t1 |
chr2.3 | CDS | 7422599 | 7422696 | 7422599 | ID=cds.MS.gene058937.t1;Parent=MS.gene058937.t1 |
chr2.3 | exon | 7422109 | 7422212 | 7422109 | ID=MS.gene058937.t1.exon12;Parent=MS.gene058937.t1 |
chr2.3 | CDS | 7422109 | 7422212 | 7422109 | ID=cds.MS.gene058937.t1;Parent=MS.gene058937.t1 |
chr2.3 | exon | 7421800 | 7421965 | 7421800 | ID=MS.gene058937.t1.exon13;Parent=MS.gene058937.t1 |
chr2.3 | CDS | 7421800 | 7421965 | 7421800 | ID=cds.MS.gene058937.t1;Parent=MS.gene058937.t1 |
chr2.3 | exon | 7421452 | 7421574 | 7421452 | ID=MS.gene058937.t1.exon14;Parent=MS.gene058937.t1 |
chr2.3 | CDS | 7421452 | 7421574 | 7421452 | ID=cds.MS.gene058937.t1;Parent=MS.gene058937.t1 |
chr2.3 | exon | 7420817 | 7420899 | 7420817 | ID=MS.gene058937.t1.exon15;Parent=MS.gene058937.t1 |
chr2.3 | CDS | 7420817 | 7420899 | 7420817 | ID=cds.MS.gene058937.t1;Parent=MS.gene058937.t1 |
chr2.3 | exon | 7420170 | 7420311 | 7420170 | ID=MS.gene058937.t1.exon16;Parent=MS.gene058937.t1 |
chr2.3 | CDS | 7420170 | 7420311 | 7420170 | ID=cds.MS.gene058937.t1;Parent=MS.gene058937.t1 |
chr2.3 | exon | 7419973 | 7420002 | 7419973 | ID=MS.gene058937.t1.exon17;Parent=MS.gene058937.t1 |
chr2.3 | CDS | 7419973 | 7420002 | 7419973 | ID=cds.MS.gene058937.t1;Parent=MS.gene058937.t1 |
chr2.3 | exon | 7419724 | 7419794 | 7419724 | ID=MS.gene058937.t1.exon18;Parent=MS.gene058937.t1 |
chr2.3 | CDS | 7419724 | 7419794 | 7419724 | ID=cds.MS.gene058937.t1;Parent=MS.gene058937.t1 |
chr2.3 | exon | 7417849 | 7418671 | 7417849 | ID=MS.gene058937.t1.exon19;Parent=MS.gene058937.t1 |
chr2.3 | CDS | 7417849 | 7418671 | 7417849 | ID=cds.MS.gene058937.t1;Parent=MS.gene058937.t1 |
Gene Sequence |
Protein sequence |