Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060420.t1 | XP_003622209.2 | 74.8 | 874 | 73 | 2 | 1 | 874 | 47 | 773 | 0.00E+00 | 1124.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060420.t1 | Q9FQ20 | 24.4 | 931 | 472 | 25 | 1 | 870 | 49 | 808 | 1.1e-31 | 140.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060420.t1 | G7L499 | 74.8 | 874 | 73 | 2 | 1 | 874 | 47 | 773 | 0.0e+00 | 1124.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene060420 | MS.gene058789 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060420.t1 | MTR_7g031420 | 72.205 | 644 | 109 | 8 | 231 | 874 | 200 | 773 | 0.0 | 876 |
| MS.gene060420.t1 | MTR_7g031420 | 75.291 | 429 | 58 | 6 | 1 | 426 | 47 | 430 | 0.0 | 609 |
| MS.gene060420.t1 | MTR_7g080575 | 44.706 | 85 | 40 | 2 | 790 | 871 | 1289 | 1369 | 3.56e-13 | 74.3 |
| MS.gene060420.t1 | MTR_3g005770 | 43.137 | 102 | 48 | 3 | 777 | 870 | 599 | 698 | 1.74e-12 | 71.6 |
| MS.gene060420.t1 | MTR_3g005770 | 40.625 | 96 | 50 | 2 | 4 | 92 | 51 | 146 | 1.25e-11 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060420.t1 | AT5G40840 | 30.504 | 377 | 203 | 10 | 544 | 870 | 287 | 654 | 1.78e-30 | 129 |
| MS.gene060420.t1 | AT5G40840 | 30.130 | 385 | 210 | 9 | 536 | 870 | 432 | 807 | 2.21e-30 | 129 |
| MS.gene060420.t1 | AT5G40840 | 48.696 | 115 | 53 | 1 | 1 | 109 | 49 | 163 | 6.88e-25 | 111 |
| MS.gene060420.t1 | AT5G40840 | 30.239 | 377 | 204 | 9 | 544 | 870 | 308 | 675 | 2.76e-30 | 128 |
| MS.gene060420.t1 | AT5G40840 | 29.534 | 386 | 212 | 10 | 536 | 870 | 432 | 808 | 5.67e-29 | 124 |
| MS.gene060420.t1 | AT5G40840 | 48.696 | 115 | 53 | 1 | 1 | 109 | 49 | 163 | 6.66e-25 | 112 |
| MS.gene060420.t1 | AT5G40840 | 29.630 | 378 | 206 | 10 | 544 | 870 | 308 | 676 | 7.95e-29 | 124 |
| MS.gene060420.t1 | AT5G40840 | 48.696 | 115 | 53 | 1 | 1 | 109 | 49 | 163 | 5.18e-25 | 112 |
| MS.gene060420.t1 | AT5G40840 | 26.282 | 312 | 171 | 9 | 536 | 797 | 432 | 734 | 3.95e-11 | 67.4 |
| MS.gene060420.t1 | AT5G16270 | 44.578 | 83 | 45 | 1 | 790 | 872 | 949 | 1030 | 1.25e-13 | 75.9 |
Find 141 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGCTTGGATATCTCCTTTC+TGG | 0.137626 | 7.1:-66165870 | MS.gene060420:CDS |
| GGGCACAAAGGAGGTGTTTC+TGG | 0.159725 | 7.1:+66162104 | None:intergenic |
| ATAGCCTTGCTGATTCTTTC+CGG | 0.221825 | 7.1:+66161035 | None:intergenic |
| CATGCCAGATTCATTTGATT+TGG | 0.256601 | 7.1:-66165715 | MS.gene060420:CDS |
| TTTAATGAGTCTCGACAAAT+TGG | 0.268349 | 7.1:-66163978 | MS.gene060420:CDS |
| CCAGAACAAATCACTCTAAA+AGG | 0.291780 | 7.1:-66165549 | MS.gene060420:intron |
| GATTTGCAGTTTGACGATTT+TGG | 0.295712 | 7.1:-66164599 | MS.gene060420:intron |
| GGTACACTTGAAGATACTTC+TGG | 0.297575 | 7.1:-66165678 | MS.gene060420:CDS |
| GAGTAGTTCAACAAATTTAC+TGG | 0.298497 | 7.1:-66164375 | MS.gene060420:CDS |
| TTTAATGAGTCTCGGCAAAT+TGG | 0.312039 | 7.1:-66163747 | MS.gene060420:CDS |
| TTTAATGAGTCTCGGCAAAT+TGG | 0.312039 | 7.1:-66164209 | MS.gene060420:CDS |
| AATTGGTATCGGGCATAATA+TGG | 0.313998 | 7.1:-66163961 | MS.gene060420:CDS |
| GAGAGATTCTACTCTCTTCA+TGG | 0.314926 | 7.1:+66164300 | None:intergenic |
| GCTGTCCTAACTTTCACATT+TGG | 0.315417 | 7.1:+66162083 | None:intergenic |
| CTGCTCTCTTGACCACCTTA+TGG | 0.321650 | 7.1:-66164561 | MS.gene060420:CDS |
| CCATGAGAGCGAGCAATCTT+TGG | 0.328345 | 7.1:-66162003 | MS.gene060420:CDS |
| TTCGTTATCTTAAGAGAGTT+AGG | 0.338990 | 7.1:+66162275 | None:intergenic |
| CAAGGTTCTCAGAAACTATA+CGG | 0.338992 | 7.1:-66162184 | MS.gene060420:CDS |
| ACTCAAAACTCAGATGAGTT+TGG | 0.341456 | 7.1:-66162038 | MS.gene060420:CDS |
| AATTGGTATCGAGCATAATA+TGG | 0.343994 | 7.1:-66164192 | MS.gene060420:CDS |
| CTGTCCTAACTTTCACATTT+GGG | 0.349674 | 7.1:+66162084 | None:intergenic |
| TAGCCTTGCTGATTCTTTCC+GGG | 0.351434 | 7.1:+66161036 | None:intergenic |
| CCCAAACTTGATAAAACTTT+CGG | 0.354289 | 7.1:-66160587 | MS.gene060420:CDS |
| TGTGCCCAAATGTGAAAGTT+AGG | 0.361590 | 7.1:-66162088 | MS.gene060420:CDS |
| GAGAGATTCTACTCTCTTCA+TGG | 0.373248 | 7.1:+66163838 | None:intergenic |
| GAGAGATTCTACTCTCTTCA+TGG | 0.373248 | 7.1:+66164069 | None:intergenic |
| CCAAAGATTGCTCGCTCTCA+TGG | 0.377918 | 7.1:+66162003 | None:intergenic |
| CATTGTTTCATATGCATTTG+AGG | 0.378968 | 7.1:+66161831 | None:intergenic |
| GATTTGGATGCTATCGATCT+TGG | 0.384420 | 7.1:-66165699 | MS.gene060420:CDS |
| GGGTTCTTCCTTGTGAAACT+TGG | 0.389382 | 7.1:+66161056 | None:intergenic |
| CTCAAAACTCAGATGAGTTT+GGG | 0.390984 | 7.1:-66162037 | MS.gene060420:CDS |
| ATATGACAATGGAATCATTA+AGG | 0.403271 | 7.1:-66163713 | MS.gene060420:CDS |
| GCATCCAAATCAAATGAATC+TGG | 0.404443 | 7.1:+66165711 | None:intergenic |
| TTTGGAAAGGAATGCTGATA+TGG | 0.414606 | 7.1:-66161985 | MS.gene060420:CDS |
| TCGCTCTCATGGGGACTTGA+AGG | 0.414752 | 7.1:+66162014 | None:intergenic |
| ACTCCTCAGTCTAAGTTTCA+AGG | 0.424086 | 7.1:-66163339 | MS.gene060420:CDS |
| ACTCCTCAGTCTAAGTTTCA+AGG | 0.424086 | 7.1:-66163549 | MS.gene060420:CDS |
| TGAAACTTAGATTGAGGAGT+TGG | 0.432321 | 7.1:+66163237 | None:intergenic |
| TTTGAAAACTACTAATTATG+TGG | 0.432441 | 7.1:-66160657 | MS.gene060420:CDS |
| ATTGAATCTATTCAGAAGAC+TGG | 0.434998 | 7.1:+66162435 | None:intergenic |
| ACTCCTCAGTCTAAGTTTCA+AGG | 0.439964 | 7.1:-66163444 | MS.gene060420:CDS |
| ATCATTATGCCAAATGGATC+AGG | 0.440544 | 7.1:-66163922 | MS.gene060420:CDS |
| ATCATTATGCCAAATGGATC+AGG | 0.440544 | 7.1:-66164153 | MS.gene060420:CDS |
| GTCATTATGCCAAATGGATC+AGG | 0.440955 | 7.1:-66163691 | MS.gene060420:CDS |
| ACCTTGGAGGAATTTCGATA+TGG | 0.444169 | 7.1:+66162201 | None:intergenic |
| ATTAAGATCATTATGCCAAA+TGG | 0.444458 | 7.1:-66164159 | MS.gene060420:CDS |
| ATTAAGGTCATTATGCCAAA+TGG | 0.444869 | 7.1:-66163697 | MS.gene060420:CDS |
| ACTCCTCAATCTAAGTTTCA+AGG | 0.452214 | 7.1:-66163234 | MS.gene060420:CDS |
| GTGCAACAAAAGGAAGCTTA+TGG | 0.452508 | 7.1:-66160632 | MS.gene060420:CDS |
| GTTAAGATCATTATGCCAAA+TGG | 0.452884 | 7.1:-66163928 | MS.gene060420:CDS |
| AAGTTTCAAGGCAGTTCAAT+TGG | 0.453695 | 7.1:-66163222 | MS.gene060420:CDS |
| GGAGGAATTTCGATATGGTC+TGG | 0.468594 | 7.1:+66162206 | None:intergenic |
| CTGGGTGGTCTGAGCGAACC+AGG | 0.470211 | 7.1:-66161241 | MS.gene060420:intron |
| CAAAGATTGCTCGCTCTCAT+GGG | 0.471062 | 7.1:+66162004 | None:intergenic |
| TGTTAAAATATATTCAAAGC+AGG | 0.483805 | 7.1:-66165844 | MS.gene060420:CDS |
| GGTTCTTCCTTGTGAAACTT+GGG | 0.485265 | 7.1:+66161057 | None:intergenic |
| AACAAATTTACTGGCAAGCA+AGG | 0.486311 | 7.1:-66164366 | MS.gene060420:CDS |
| TCCATTTCAGGGTACTCAAA+AGG | 0.488316 | 7.1:-66162543 | MS.gene060420:intron |
| ATATTGCAAAGCCGCATATC+CGG | 0.488596 | 7.1:-66164341 | MS.gene060420:CDS |
| GTACACTTGAAGATACTTCT+GGG | 0.490166 | 7.1:-66165677 | MS.gene060420:intron |
| TCAACAATTGTGGACTCTGC+AGG | 0.490391 | 7.1:+66163261 | None:intergenic |
| TCAACAATTGTGGACTCTGC+AGG | 0.490391 | 7.1:+66163366 | None:intergenic |
| TCAACAATTGTGGACTCTGC+AGG | 0.490391 | 7.1:+66163471 | None:intergenic |
| AAACAAGGACTTGAGCTTTG+CGG | 0.493800 | 7.1:+66162319 | None:intergenic |
| GCTGTTTCCTACAGAGTGCT+TGG | 0.503054 | 7.1:-66165885 | MS.gene060420:CDS |
| GAATGCTGATATGGTGGAAG+AGG | 0.503411 | 7.1:-66161976 | MS.gene060420:intron |
| CGTATAGTTTCTGAGAACCT+TGG | 0.504073 | 7.1:+66162185 | None:intergenic |
| TTATGTGGATGTGCAACAAA+AGG | 0.506967 | 7.1:-66160642 | MS.gene060420:CDS |
| GAGTCTCGACAAATTGGTAT+CGG | 0.509443 | 7.1:-66163972 | MS.gene060420:CDS |
| TTCAAGGCAGTTCAATTGGA+AGG | 0.514538 | 7.1:-66163218 | MS.gene060420:CDS |
| ACGAAAACTCTACCAGAGTC+AGG | 0.516182 | 7.1:-66162257 | MS.gene060420:CDS |
| TGAAACTTAGACTGAGGAGT+TGG | 0.517094 | 7.1:+66163342 | None:intergenic |
| TGAAACTTAGACTGAGGAGT+TGG | 0.517094 | 7.1:+66163447 | None:intergenic |
| TGAAACTTAGACTGAGGAGT+TGG | 0.517094 | 7.1:+66163552 | None:intergenic |
| ATAGTTTCTGAGAACCTTGG+AGG | 0.523070 | 7.1:+66162188 | None:intergenic |
| GATTCTGTTGCAGTTGGTGT+AGG | 0.523227 | 7.1:+66163026 | None:intergenic |
| CCAGGGAAACAAAACGAGGC+AGG | 0.534114 | 7.1:-66161094 | MS.gene060420:CDS |
| CCGCATATCCGGTCAAAATG+TGG | 0.535236 | 7.1:-66164330 | MS.gene060420:CDS |
| CGAGCAGATTCTGTTGCAGT+TGG | 0.537793 | 7.1:+66163020 | None:intergenic |
| GAGATATCCAAGCACTCTGT+AGG | 0.538784 | 7.1:+66165878 | None:intergenic |
| AGTCTCGACAAATTGGTATC+GGG | 0.543772 | 7.1:-66163971 | MS.gene060420:CDS |
| TCAAGCAAAGAGAGACGTAA+TGG | 0.544803 | 7.1:+66162481 | None:intergenic |
| CATACTTGATGCAAGTGACT+TGG | 0.545810 | 7.1:-66162518 | MS.gene060420:CDS |
| TCTCTTTGACAACAGAAGAC+TGG | 0.546815 | 7.1:+66163610 | None:intergenic |
| AGATCTCAATCTCGTGAATG+AGG | 0.555285 | 7.1:-66161779 | MS.gene060420:intron |
| CTCAAATGCATATGAAACAA+TGG | 0.558311 | 7.1:-66161830 | MS.gene060420:CDS |
| TTTCCTTGAAACTTAGACTG+AGG | 0.559377 | 7.1:+66163336 | None:intergenic |
| TTTCCTTGAAACTTAGACTG+AGG | 0.559377 | 7.1:+66163546 | None:intergenic |
| CTGCCTTGAAACTTAGATTG+AGG | 0.562097 | 7.1:+66163231 | None:intergenic |
| TTATCTATCACATACTCAGT+AGG | 0.569202 | 7.1:+66162951 | None:intergenic |
| GACATGCGCAATTTCTCCAC+AGG | 0.569458 | 7.1:+66165744 | None:intergenic |
| TTTGGGAACACAGAAGGAAG+CGG | 0.572106 | 7.1:-66163787 | MS.gene060420:CDS |
| TTTGGGAACACAGAAGGAAG+CGG | 0.572106 | 7.1:-66164018 | MS.gene060420:CDS |
| GATTCCGACACACCTGACTC+TGG | 0.582050 | 7.1:+66162245 | None:intergenic |
| GACTCATTAAAAGATGAAGA+AGG | 0.583187 | 7.1:+66163990 | None:intergenic |
| AGGAGTTGGATCAACAATTG+TGG | 0.585461 | 7.1:+66163251 | None:intergenic |
| TATCCGGTCAAAATGTGGAC+GGG | 0.589712 | 7.1:-66164325 | MS.gene060420:CDS |
| AGAGAGTAGAATCTCTCAAG+AGG | 0.589856 | 7.1:-66164294 | MS.gene060420:CDS |
| TTCACATTTGGGCACAAAGG+AGG | 0.591829 | 7.1:+66162095 | None:intergenic |
| TTTAGAGTGATTTGTTCTGG+GGG | 0.591840 | 7.1:+66165552 | None:intergenic |
| ATTTGTTATTGATAAAACGA+TGG | 0.593270 | 7.1:-66162979 | MS.gene060420:CDS |
| AAGGTTCTCAGAAACTATAC+GGG | 0.594559 | 7.1:-66162183 | MS.gene060420:CDS |
| AGGTTCTACTTCTACTACGT+CGG | 0.595393 | 7.1:-66163063 | MS.gene060420:CDS |
| ACTTTCACATTTGGGCACAA+AGG | 0.597311 | 7.1:+66162092 | None:intergenic |
| TTTGGGAAGACAGAAGGAAG+CGG | 0.601236 | 7.1:-66164249 | MS.gene060420:CDS |
| CTGCATATCCAGTCAAAATG+TGG | 0.602677 | 7.1:-66163868 | MS.gene060420:CDS |
| TCAATTGGAAGGCCAAAACA+AGG | 0.602820 | 7.1:-66163207 | MS.gene060420:intron |
| CAAATGGATCAGGAAAATGT+TGG | 0.607877 | 7.1:-66163681 | MS.gene060420:CDS |
| CCGCGTATCCAGTCAAAATG+TGG | 0.609813 | 7.1:-66164099 | MS.gene060420:CDS |
| AAGAGAGACGTAATGGTCTG+TGG | 0.611657 | 7.1:+66162488 | None:intergenic |
| GTGTCTCAGTCTCAAACTTG+TGG | 0.612897 | 7.1:-66162152 | MS.gene060420:CDS |
| AGGAGTTGGATCAACAATTG+TGG | 0.613279 | 7.1:+66163356 | None:intergenic |
| AGGAGTTGGATCAACAATTG+TGG | 0.613279 | 7.1:+66163461 | None:intergenic |
| AAGTTTCACAAGGAAGAACC+CGG | 0.613435 | 7.1:-66161054 | MS.gene060420:CDS |
| TATCGAGCATAATATGGCAA+TGG | 0.614046 | 7.1:-66164186 | MS.gene060420:CDS |
| AGAGCGAGCAATCTTTGGAA+AGG | 0.614684 | 7.1:-66161998 | MS.gene060420:CDS |
| AGGACTTGAGCTTTGCGGAG+TGG | 0.615255 | 7.1:+66162324 | None:intergenic |
| TATCCTTGAAACTTAGACTG+AGG | 0.618957 | 7.1:+66163441 | None:intergenic |
| TCTACCAGAGTCAGGTGTGT+CGG | 0.619000 | 7.1:-66162249 | MS.gene060420:CDS |
| AAAAGGGTTTCATTTGAACA+CGG | 0.623425 | 7.1:-66163300 | MS.gene060420:CDS |
| AAAAGGGTTTCATTTGAACA+CGG | 0.623425 | 7.1:-66163405 | MS.gene060420:CDS |
| AAAAGGGTTTCATTTGAACA+CGG | 0.623425 | 7.1:-66163510 | MS.gene060420:CDS |
| AAAGATTGCTCGCTCTCATG+GGG | 0.625802 | 7.1:+66162005 | None:intergenic |
| TATCGGGCATAATATGGCAA+TGG | 0.627526 | 7.1:-66163955 | MS.gene060420:CDS |
| GATCAGGAAAATGTTGGCGT+TGG | 0.631246 | 7.1:-66163675 | MS.gene060420:CDS |
| ATATCCGGTCAAAATGTGGA+CGG | 0.634570 | 7.1:-66164326 | MS.gene060420:CDS |
| AAATTTGTTGAACTACTCGA+AGG | 0.635768 | 7.1:+66164380 | None:intergenic |
| AACAAAGAGTAACACGCCTG+TGG | 0.636355 | 7.1:-66165760 | MS.gene060420:CDS |
| GACTCATTAAAAGATGCAGA+AGG | 0.640269 | 7.1:+66163759 | None:intergenic |
| GACTCATTAAAAGATGCAGA+AGG | 0.640269 | 7.1:+66164221 | None:intergenic |
| AACTTGTCCCAAGTTTCACA+AGG | 0.641494 | 7.1:-66161064 | MS.gene060420:CDS |
| TCTGTTGTCAAAGAGAGCGT+CGG | 0.645978 | 7.1:-66163603 | MS.gene060420:CDS |
| TATCGAGCATAATATGACAA+TGG | 0.647511 | 7.1:-66163724 | MS.gene060420:CDS |
| GGAAAGGAATGCTGATATGG+TGG | 0.649479 | 7.1:-66161982 | MS.gene060420:CDS |
| ACCATATCGAAATTCCTCCA+AGG | 0.659814 | 7.1:-66162202 | MS.gene060420:CDS |
| AGAGAGTAGAATCTCTCGAG+AGG | 0.662051 | 7.1:-66163832 | MS.gene060420:CDS |
| AGAGAGTAGAATCTCTCGAG+AGG | 0.662051 | 7.1:-66164063 | MS.gene060420:CDS |
| GAACCCGGAAAGAATCAGCA+AGG | 0.675453 | 7.1:-66161039 | MS.gene060420:CDS |
| TAGTGAGCAAAGCTTTACAG+TGG | 0.675619 | 7.1:-66161806 | MS.gene060420:CDS |
| TCTACTTGATGATTGCAACA+AGG | 0.703604 | 7.1:-66165814 | MS.gene060420:CDS |
| AGATCCAGGGAAACAAAACG+AGG | 0.754703 | 7.1:-66161098 | MS.gene060420:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAAATATTCTATAAAATAA+TGG | + | chr7.1:66163299-66163318 | None:intergenic | 10.0% |
| !!! | AAAAAGTATATGTTATAAAA+AGG | - | chr7.1:66165535-66165554 | MS.gene060420:intron | 10.0% |
| !!! | CTTTTTTTTTTTTTTTTTTG+AGG | + | chr7.1:66165521-66165540 | None:intergenic | 10.0% |
| !!! | TTTTCTATTTAATATTTTTC+AGG | - | chr7.1:66165790-66165809 | MS.gene060420:CDS | 10.0% |
| !! | AAATCTATATATGATGTAAT+TGG | - | chr7.1:66161590-66161609 | MS.gene060420:intron | 15.0% |
| !! | AAATTTAGAAGTTCAAAAAA+GGG | - | chr7.1:66162945-66162964 | MS.gene060420:intron | 15.0% |
| !! | AATCTATATATGATGTAATT+GGG | - | chr7.1:66161591-66161610 | MS.gene060420:intron | 15.0% |
| !! | ATATTTAGAAGTTCAAAAAA+GGG | - | chr7.1:66163050-66163069 | MS.gene060420:CDS | 15.0% |
| !! | CGTTAAATTATAATAATCTA+AGG | - | chr7.1:66165163-66165182 | MS.gene060420:intron | 15.0% |
| !! | GCAAAATTAATTTATGAAAA+CGG | - | chr7.1:66165602-66165621 | MS.gene060420:intron | 15.0% |
| !! | TAAAAACATTTAAATCTCAA+TGG | + | chr7.1:66163629-66163648 | None:intergenic | 15.0% |
| !! | TACGAACTAATAAAATAATA+AGG | - | chr7.1:66164899-66164918 | MS.gene060420:intron | 15.0% |
| !! | TACTTAGTGATAAAATTATT+AGG | - | chr7.1:66163835-66163854 | MS.gene060420:CDS | 15.0% |
| !! | AATATGATTAAAATCTAAGG+AGG | + | chr7.1:66165637-66165656 | None:intergenic | 20.0% |
| !! | ATCATTTAAATAATCCTCAA+AGG | + | chr7.1:66161128-66161147 | None:intergenic | 20.0% |
| !! | CTACACATATAATATCAATA+GGG | + | chr7.1:66161243-66161262 | None:intergenic | 20.0% |
| !! | CTGAATATGATTAAAATCTA+AGG | + | chr7.1:66165640-66165659 | None:intergenic | 20.0% |
| !! | GAAATTTAGAAGTTCAAAAA+AGG | - | chr7.1:66162944-66162963 | MS.gene060420:intron | 20.0% |
| !! | GAGAATTATGTTTGAAAAAT+CGG | - | chr7.1:66165659-66165678 | MS.gene060420:intron | 20.0% |
| !! | GATATTTAGAAGTTCAAAAA+AGG | - | chr7.1:66163049-66163068 | MS.gene060420:CDS | 20.0% |
| !! | GTATATGTTATAAAAAGGTT+TGG | - | chr7.1:66165540-66165559 | MS.gene060420:intron | 20.0% |
| !! | GTTAATTTCAGAAGTTTAAT+TGG | - | chr7.1:66160826-66160845 | MS.gene060420:intron | 20.0% |
| !! | GTTACATTGATCAAATTAAA+TGG | + | chr7.1:66161158-66161177 | None:intergenic | 20.0% |
| !! | TATTAGATGTACAATAACTA+CGG | - | chr7.1:66161647-66161666 | MS.gene060420:intron | 20.0% |
| !! | TGTTAAAATATATTCAAAGC+AGG | - | chr7.1:66160627-66160646 | MS.gene060420:CDS | 20.0% |
| !! | TTTAGAAATTAAAGAGCTTA+TGG | + | chr7.1:66165130-66165149 | None:intergenic | 20.0% |
| !! | TTTGAAAACTACTAATTATG+TGG | - | chr7.1:66165814-66165833 | MS.gene060420:CDS | 20.0% |
| !!! | AATAGATATCAGTATGTTTT+TGG | - | chr7.1:66162204-66162223 | MS.gene060420:CDS | 20.0% |
| !!! | AATAGATATGAGTATGTTTT+TGG | - | chr7.1:66162435-66162454 | MS.gene060420:CDS | 20.0% |
| !!! | ATAGATATCAGTATGTTTTT+GGG | - | chr7.1:66162205-66162224 | MS.gene060420:CDS | 20.0% |
| !!! | ATAGATATGAGTATGTTTTT+GGG | - | chr7.1:66162436-66162455 | MS.gene060420:CDS | 20.0% |
| !!! | ATTTGTTATTGATAAAACGA+TGG | - | chr7.1:66163492-66163511 | MS.gene060420:CDS | 20.0% |
| !!! | GATGAAAATTTTCATTTTCT+TGG | + | chr7.1:66162837-66162856 | None:intergenic | 20.0% |
| !!! | TAGAAAACATAATCTTTTTC+TGG | - | chr7.1:66165580-66165599 | MS.gene060420:intron | 20.0% |
| !!! | TCACAAAAACTAAGATTTTT+AGG | + | chr7.1:66161854-66161873 | None:intergenic | 20.0% |
| !!! | TTTGATGACTTTAGAAAATA+TGG | - | chr7.1:66161795-66161814 | MS.gene060420:CDS | 20.0% |
| !!! | TTTTAAGAATAACGAGTAAT+TGG | + | chr7.1:66165719-66165738 | None:intergenic | 20.0% |
| ! | AACTCAAAAATAGATAAGCT+TGG | + | chr7.1:66164970-66164989 | None:intergenic | 25.0% |
| ! | AAGACAGAATTCAATTTATC+TGG | + | chr7.1:66161700-66161719 | None:intergenic | 25.0% |
| ! | AAGTTTGTACTAAATAGAGT+TGG | - | chr7.1:66161617-66161636 | MS.gene060420:intron | 25.0% |
| ! | AATGTTGGAATTAAATGGTT+TGG | - | chr7.1:66163791-66163810 | MS.gene060420:CDS | 25.0% |
| ! | ACTCAAAAATAGATAAGCTT+GGG | + | chr7.1:66164969-66164988 | None:intergenic | 25.0% |
| ! | AGACAGAATTCAATTTATCT+GGG | + | chr7.1:66161699-66161718 | None:intergenic | 25.0% |
| ! | ATATGACAATGGAATCATTA+AGG | - | chr7.1:66162758-66162777 | MS.gene060420:intron | 25.0% |
| ! | ATGAAAGTTCTGTTGATATT+TGG | - | chr7.1:66164535-66164554 | MS.gene060420:intron | 25.0% |
| ! | ATGTTGGAATTAAATGGTTT+GGG | - | chr7.1:66163792-66163811 | MS.gene060420:CDS | 25.0% |
| ! | ATTAAGATCATTATGCCAAA+TGG | - | chr7.1:66162312-66162331 | MS.gene060420:CDS | 25.0% |
| ! | CACAAAATCAATAAGTTTGA+TGG | + | chr7.1:66162015-66162034 | None:intergenic | 25.0% |
| ! | GCAAAAAACATTCTCAAAAT+CGG | + | chr7.1:66165748-66165767 | None:intergenic | 25.0% |
| ! | GCTACACATATAATATCAAT+AGG | + | chr7.1:66161244-66161263 | None:intergenic | 25.0% |
| ! | TAACATTGTAAGTGTGAATA+AGG | + | chr7.1:66164939-66164958 | None:intergenic | 25.0% |
| ! | TACAGAATGTTGGAATTAAA+TGG | - | chr7.1:66163786-66163805 | MS.gene060420:CDS | 25.0% |
| ! | TATAGTTTATCAATCCTTTG+AGG | - | chr7.1:66161111-66161130 | MS.gene060420:CDS | 25.0% |
| ! | TTATGTTTGAAAAATCGGAA+AGG | - | chr7.1:66165664-66165683 | MS.gene060420:intron | 25.0% |
| ! | TTCAGAAGTTTAATTGGTTA+GGG | - | chr7.1:66160832-66160851 | MS.gene060420:intron | 25.0% |
| ! | TTTCAGAAGTTTAATTGGTT+AGG | - | chr7.1:66160831-66160850 | MS.gene060420:intron | 25.0% |
| !! | ATTTTTGAATTCTCAGTTTC+AGG | + | chr7.1:66165096-66165115 | None:intergenic | 25.0% |
| !! | CATTTTCTTACTTGAAAACA+AGG | + | chr7.1:66164170-66164189 | None:intergenic | 25.0% |
| !! | GTTATTAAATATTTTCTGCC+TGG | + | chr7.1:66161558-66161577 | None:intergenic | 25.0% |
| !! | TCATACTCAACATTCTATTT+TGG | - | chr7.1:66163384-66163403 | MS.gene060420:CDS | 25.0% |
| !!! | AAATATGTCAGAAGTATTTG+AGG | - | chr7.1:66163733-66163752 | MS.gene060420:CDS | 25.0% |
| !!! | ATATTTTAACAACTCCAGAA+AGG | + | chr7.1:66160618-66160637 | None:intergenic | 25.0% |
| !!! | GCTTATCTATTTTTGAGTTA+AGG | - | chr7.1:66164971-66164990 | MS.gene060420:intron | 25.0% |
| !!! | GTAACTGTTTTGTTTATCTT+TGG | - | chr7.1:66161173-66161192 | MS.gene060420:intron | 25.0% |
| !!! | GTTTTTTGATTCTTTTCCTT+CGG | - | chr7.1:66165204-66165223 | MS.gene060420:intron | 25.0% |
| !!! | TGGTTTTATAAACCTTGTTT+TGG | + | chr7.1:66163279-66163298 | None:intergenic | 25.0% |
| !!! | TTCTGTTTTGATTCTTTGAT+TGG | - | chr7.1:66161824-66161843 | MS.gene060420:CDS | 25.0% |
| AAAAGGGTTTCATTTGAACA+CGG | - | chr7.1:66162961-66162980 | MS.gene060420:intron | 30.0% | |
| AACAACTTCAGACATAAGAA+TGG | + | chr7.1:66163601-66163620 | None:intergenic | 30.0% | |
| AACACAAATTAAAGCATACC+AGG | + | chr7.1:66165472-66165491 | None:intergenic | 30.0% | |
| ACGAACTAAATGATTTATCC+TGG | - | chr7.1:66165037-66165056 | MS.gene060420:intron | 30.0% | |
| ATTAAGGTCATTATGCCAAA+TGG | - | chr7.1:66162774-66162793 | MS.gene060420:intron | 30.0% | |
| ATTGAATCTATTCAGAAGAC+TGG | + | chr7.1:66164039-66164058 | None:intergenic | 30.0% | |
| CAAAAAACATAGTATAAGCC+AGG | + | chr7.1:66165058-66165077 | None:intergenic | 30.0% | |
| CATTGTTTCATATGCATTTG+AGG | + | chr7.1:66164643-66164662 | None:intergenic | 30.0% | |
| CCCAAACTTGATAAAACTTT+CGG | - | chr7.1:66165884-66165903 | MS.gene060420:CDS | 30.0% | |
| CTCAAATGCATATGAAACAA+TGG | - | chr7.1:66164641-66164660 | MS.gene060420:intron | 30.0% | |
| GAATGTAGTGAAAAACTATG+AGG | + | chr7.1:66161479-66161498 | None:intergenic | 30.0% | |
| GACATATTTATCAACTGTGA+TGG | + | chr7.1:66163722-66163741 | None:intergenic | 30.0% | |
| GACTCATTAAAAGATGAAGA+AGG | + | chr7.1:66162484-66162503 | None:intergenic | 30.0% | |
| GAGTAGTTCAACAAATTTAC+TGG | - | chr7.1:66162096-66162115 | MS.gene060420:CDS | 30.0% | |
| GATAATAATGAAGCAAAACC+AGG | - | chr7.1:66161537-66161556 | MS.gene060420:intron | 30.0% | |
| GCATGGTTGAAAAGAATAAT+AGG | + | chr7.1:66163567-66163586 | None:intergenic | 30.0% | |
| GCGTAAACATTTAAGTGAAT+TGG | - | chr7.1:66161427-66161446 | MS.gene060420:intron | 30.0% | |
| GTTAAGATCATTATGCCAAA+TGG | - | chr7.1:66162543-66162562 | MS.gene060420:intron | 30.0% | |
| TAAGAATAACGAGTAATTGG+TGG | + | chr7.1:66165716-66165735 | None:intergenic | 30.0% | |
| TACCACATTTATTCTTGTTC+CGG | - | chr7.1:66164747-66164766 | MS.gene060420:intron | 30.0% | |
| TAGTTAAGGAGTTAGTTAGT+TGG | - | chr7.1:66161356-66161375 | MS.gene060420:intron | 30.0% | |
| TATCGAGCATAATATGACAA+TGG | - | chr7.1:66162747-66162766 | MS.gene060420:intron | 30.0% | |
| TTATCTATCACATACTCAGT+AGG | + | chr7.1:66163523-66163542 | None:intergenic | 30.0% | |
| TTCGTTATCTTAAGAGAGTT+AGG | + | chr7.1:66164199-66164218 | None:intergenic | 30.0% | |
| TTTAATGAGTCTCGACAAAT+TGG | - | chr7.1:66162493-66162512 | MS.gene060420:CDS | 30.0% | |
| ! | AAAAGTTTTGCTCAAGTATG+AGG | + | chr7.1:66165351-66165370 | None:intergenic | 30.0% |
| ! | AAATGTACTTTTCAGCCATA+AGG | + | chr7.1:66161928-66161947 | None:intergenic | 30.0% |
| ! | AATTGGTATCGAGCATAATA+TGG | - | chr7.1:66162279-66162298 | MS.gene060420:CDS | 30.0% |
| ! | AGATGTTTTGTCTAATACTG+CGG | - | chr7.1:66161028-66161047 | MS.gene060420:CDS | 30.0% |
| ! | ATTAAATGGTTTGGGTATAG+AGG | - | chr7.1:66163800-66163819 | MS.gene060420:CDS | 30.0% |
| ! | TAAATGTTTACGCTTTTAGC+TGG | + | chr7.1:66161420-66161439 | None:intergenic | 30.0% |
| ! | TAACATTTTCCTGATCCATT+TGG | + | chr7.1:66162561-66162580 | None:intergenic | 30.0% |
| ! | TCAAAGTATCACTATCTTGA+GGG | + | chr7.1:66163881-66163900 | None:intergenic | 30.0% |
| ! | TTAAATGGTTTGGGTATAGA+GGG | - | chr7.1:66163801-66163820 | MS.gene060420:CDS | 30.0% |
| ! | TTCAAAGTATCACTATCTTG+AGG | + | chr7.1:66163882-66163901 | None:intergenic | 30.0% |
| !! | AAATTTGTTGAACTACTCGA+AGG | + | chr7.1:66162094-66162113 | None:intergenic | 30.0% |
| !! | AACTCTAAAGTTTACGATCT+AGG | + | chr7.1:66161307-66161326 | None:intergenic | 30.0% |
| !! | AAGGCTATTTTATGAAATCC+TGG | - | chr7.1:66165451-66165470 | MS.gene060420:intron | 30.0% |
| !! | CCGAAAGTTTTATCAAGTTT+GGG | + | chr7.1:66165887-66165906 | None:intergenic | 30.0% |
| !! | CGAAAGTTTTATCAAGTTTG+GGG | + | chr7.1:66165886-66165905 | None:intergenic | 30.0% |
| !! | TACTAACATTGTTTTTCTGC+AGG | - | chr7.1:66164124-66164143 | MS.gene060420:CDS | 30.0% |
| !! | TCCGAAAGTTTTATCAAGTT+TGG | + | chr7.1:66165888-66165907 | None:intergenic | 30.0% |
| !! | TGTTTTCTATGATGATGTAC+AGG | - | chr7.1:66165318-66165337 | MS.gene060420:intron | 30.0% |
| !!! | AACTGCAATTTGGTTTTTCT+AGG | + | chr7.1:66164609-66164628 | None:intergenic | 30.0% |
| !!! | CTTTTAGAGTGATTTGTTCT+GGG | + | chr7.1:66160924-66160943 | None:intergenic | 30.0% |
| !!! | GCTTATACTATGTTTTTTGC+AGG | - | chr7.1:66165059-66165078 | MS.gene060420:intron | 30.0% |
| !!! | TGCTTAGTTTTACAGAATGT+TGG | - | chr7.1:66163776-66163795 | MS.gene060420:CDS | 30.0% |
| !!! | TTTTAGAGTGATTTGTTCTG+GGG | + | chr7.1:66160923-66160942 | None:intergenic | 30.0% |
| AACAAATTTACTGGCAAGCA+AGG | - | chr7.1:66162105-66162124 | MS.gene060420:CDS | 35.0% | |
| AAGGTTCTCAGAAACTATAC+GGG | - | chr7.1:66164288-66164307 | MS.gene060420:CDS | 35.0% | |
| AAGTTTCAAGGCAGTTCAAT+TGG | - | chr7.1:66163249-66163268 | MS.gene060420:CDS | 35.0% | |
| ACCACATTTATTCTTGTTCC+GGG | - | chr7.1:66164748-66164767 | MS.gene060420:intron | 35.0% | |
| ACTCAAAACTCAGATGAGTT+TGG | - | chr7.1:66164433-66164452 | MS.gene060420:intron | 35.0% | |
| ACTCCTCAATCTAAGTTTCA+AGG | - | chr7.1:66163237-66163256 | MS.gene060420:CDS | 35.0% | |
| ATCATTATGCCAAATGGATC+AGG | - | chr7.1:66162318-66162337 | MS.gene060420:CDS | 35.0% | |
| CAAATGGATCAGGAAAATGT+TGG | - | chr7.1:66162328-66162347 | MS.gene060420:CDS | 35.0% | |
| CAAGGTTCTCAGAAACTATA+CGG | - | chr7.1:66164287-66164306 | MS.gene060420:CDS | 35.0% | |
| CATGCCAGATTCATTTGATT+TGG | - | chr7.1:66160756-66160775 | MS.gene060420:intron | 35.0% | |
| CCAGAACAAATCACTCTAAA+AGG | - | chr7.1:66160922-66160941 | MS.gene060420:intron | 35.0% | |
| CTCAAAACTCAGATGAGTTT+GGG | - | chr7.1:66164434-66164453 | MS.gene060420:intron | 35.0% | |
| CTGTCCTAACTTTCACATTT+GGG | + | chr7.1:66164390-66164409 | None:intergenic | 35.0% | |
| GACTCATTAAAAGATGCAGA+AGG | + | chr7.1:66162253-66162272 | None:intergenic | 35.0% | |
| GCATCCAAATCAAATGAATC+TGG | + | chr7.1:66160763-66160782 | None:intergenic | 35.0% | |
| GTACACTTGAAGATACTTCT+GGG | - | chr7.1:66160794-66160813 | MS.gene060420:intron | 35.0% | |
| GTCAGATATGTTTGAATGAC+TGG | - | chr7.1:66161669-66161688 | MS.gene060420:intron | 35.0% | |
| GTTAGTTGTGTGGAGAATTA+TGG | + | chr7.1:66164587-66164606 | None:intergenic | 35.0% | |
| TATCCTTGAAACTTAGACTG+AGG | + | chr7.1:66163033-66163052 | None:intergenic | 35.0% | |
| TATCGAGCATAATATGGCAA+TGG | - | chr7.1:66162285-66162304 | MS.gene060420:CDS | 35.0% | |
| TGAAACTTAGATTGAGGAGT+TGG | + | chr7.1:66163237-66163256 | None:intergenic | 35.0% | |
| TGTAGTGAAAAACTATGAGG+TGG | + | chr7.1:66161476-66161495 | None:intergenic | 35.0% | |
| TTAGTTCGTAACGAATATCG+AGG | + | chr7.1:66164889-66164908 | None:intergenic | 35.0% | |
| TTATGTGGATGTGCAACAAA+AGG | - | chr7.1:66165829-66165848 | MS.gene060420:CDS | 35.0% | |
| TTATTTGCTTCCTAGAACAC+AGG | - | chr7.1:66163649-66163668 | MS.gene060420:CDS | 35.0% | |
| TTCTGCATTGAACTGCAATT+TGG | + | chr7.1:66164619-66164638 | None:intergenic | 35.0% | |
| TTTAATGAGTCTCGGCAAAT+TGG | - | chr7.1:66162262-66162281 | MS.gene060420:CDS | 35.0% | |
| TTTCCTTGAAACTTAGACTG+AGG | + | chr7.1:66162928-66162947 | None:intergenic | 35.0% | |
| TTTGGAAAGGAATGCTGATA+TGG | - | chr7.1:66164486-66164505 | MS.gene060420:intron | 35.0% | |
| ! | AATCATTTAGTTCGTAGTCC+AGG | + | chr7.1:66165032-66165051 | None:intergenic | 35.0% |
| ! | AATTGGTATCGGGCATAATA+TGG | - | chr7.1:66162510-66162529 | MS.gene060420:CDS | 35.0% |
| ! | ACAAAGTATTTGCTTGAAGC+GGG | + | chr7.1:66161282-66161301 | None:intergenic | 35.0% |
| ! | CAACATTTTCCTGATCCATT+TGG | + | chr7.1:66162792-66162811 | None:intergenic | 35.0% |
| ! | CACAAAGTATTTGCTTGAAG+CGG | + | chr7.1:66161283-66161302 | None:intergenic | 35.0% |
| ! | CTGCATCTTTTAATGAGTCT+CGG | - | chr7.1:66162254-66162273 | MS.gene060420:CDS | 35.0% |
| ! | GATGTTTTGTCTAATACTGC+GGG | - | chr7.1:66161029-66161048 | MS.gene060420:CDS | 35.0% |
| ! | GATTTGCAGTTTGACGATTT+TGG | - | chr7.1:66161872-66161891 | MS.gene060420:intron | 35.0% |
| ! | TCATGCAGCTGAATATCTTT+TGG | - | chr7.1:66161971-66161990 | MS.gene060420:intron | 35.0% |
| ! | TCTACTTGATGATTGCAACA+AGG | - | chr7.1:66160657-66160676 | MS.gene060420:CDS | 35.0% |
| ! | TGACATTTTCCTGATCCATT+TGG | + | chr7.1:66162330-66162349 | None:intergenic | 35.0% |
| ! | TTCTATGATGATGTACAGGA+AGG | - | chr7.1:66165322-66165341 | MS.gene060420:intron | 35.0% |
| !! | AACTTTAGAGTTGAGAAGCT+TGG | - | chr7.1:66161315-66161334 | MS.gene060420:intron | 35.0% |
| !! | ACTGCATTTTGATCCATTTC+AGG | - | chr7.1:66163916-66163935 | MS.gene060420:CDS | 35.0% |
| !! | AGCAAAACTTTTCAAGATCC+AGG | - | chr7.1:66165359-66165378 | MS.gene060420:intron | 35.0% |
| !! | CTGCATTTTGATCCATTTCA+GGG | - | chr7.1:66163917-66163936 | MS.gene060420:CDS | 35.0% |
| !! | GCAAAACTTTTCAAGATCCA+GGG | - | chr7.1:66165360-66165379 | MS.gene060420:intron | 35.0% |
| !! | GTTTTTCTAGGTTAGTTGTG+TGG | + | chr7.1:66164597-66164616 | None:intergenic | 35.0% |
| !! | TTTAGAGTGATTTGTTCTGG+GGG | + | chr7.1:66160922-66160941 | None:intergenic | 35.0% |
| !!! | ACTCAACATTCTATTTTGGC+AGG | - | chr7.1:66163388-66163407 | MS.gene060420:CDS | 35.0% |
| !!! | CAGTTTGACGATTTTGGTTT+GGG | - | chr7.1:66161878-66161897 | MS.gene060420:intron | 35.0% |
| !!! | CCTTTTAGAGTGATTTGTTC+TGG | + | chr7.1:66160925-66160944 | None:intergenic | 35.0% |
| !!! | TATGTTTTTGGGAACACAGA+AGG | - | chr7.1:66162447-66162466 | MS.gene060420:CDS | 35.0% |
| !!! | TATGTTTTTGGGAAGACAGA+AGG | - | chr7.1:66162216-66162235 | MS.gene060420:CDS | 35.0% |
| AAAAACCACGCAGTGTTAGA+AGG | + | chr7.1:66165190-66165209 | None:intergenic | 40.0% | |
| AAACAAGGACTTGAGCTTTG+CGG | + | chr7.1:66164155-66164174 | None:intergenic | 40.0% | |
| AACTTGTCCCAAGTTTCACA+AGG | - | chr7.1:66165407-66165426 | MS.gene060420:intron | 40.0% | |
| AAGTTTCACAAGGAAGAACC+CGG | - | chr7.1:66165417-66165436 | MS.gene060420:CDS | 40.0% | |
| ACCATATCGAAATTCCTCCA+AGG | - | chr7.1:66164269-66164288 | MS.gene060420:CDS | 40.0% | |
| ACCTTGGAGGAATTTCGATA+TGG | + | chr7.1:66164273-66164292 | None:intergenic | 40.0% | |
| ACTCCTCAGTCTAAGTTTCA+AGG | - | chr7.1:66162922-66162941 | MS.gene060420:intron | 40.0% | |
| ACTTTCACATTTGGGCACAA+AGG | + | chr7.1:66164382-66164401 | None:intergenic | 40.0% | |
| AGAGAGTAGAATCTCTCAAG+AGG | - | chr7.1:66162177-66162196 | MS.gene060420:CDS | 40.0% | |
| AGATCTCAATCTCGTGAATG+AGG | - | chr7.1:66164692-66164711 | MS.gene060420:intron | 40.0% | |
| AGGAGTTGGATCAACAATTG+TGG | + | chr7.1:66163013-66163032 | None:intergenic | 40.0% | |
| AGGTTCTACTTCTACTACGT+CGG | - | chr7.1:66163408-66163427 | MS.gene060420:CDS | 40.0% | |
| AGTCTCGACAAATTGGTATC+GGG | - | chr7.1:66162500-66162519 | MS.gene060420:CDS | 40.0% | |
| AGTTGAGAAGCTTGGTTAAG+AGG | - | chr7.1:66161323-66161342 | MS.gene060420:intron | 40.0% | |
| ATATCCGGTCAAAATGTGGA+CGG | - | chr7.1:66162145-66162164 | MS.gene060420:CDS | 40.0% | |
| ATATTGCAAAGCCGCATATC+CGG | - | chr7.1:66162130-66162149 | MS.gene060420:CDS | 40.0% | |
| CATACTTGATGCAAGTGACT+TGG | - | chr7.1:66163953-66163972 | MS.gene060420:CDS | 40.0% | |
| CGTGTTCGATAGTTCTTACA+TGG | - | chr7.1:66161080-66161099 | MS.gene060420:CDS | 40.0% | |
| CTGCATATCCAGTCAAAATG+TGG | - | chr7.1:66162603-66162622 | MS.gene060420:intron | 40.0% | |
| CTGCCTTGAAACTTAGATTG+AGG | + | chr7.1:66163243-66163262 | None:intergenic | 40.0% | |
| CTTGAAGATACTTCTGGGTA+AGG | - | chr7.1:66160799-66160818 | MS.gene060420:intron | 40.0% | |
| GAATAACGAGTAATTGGTGG+TGG | + | chr7.1:66165713-66165732 | None:intergenic | 40.0% | |
| GAATGGATAGCAAAAGAGCA+TGG | + | chr7.1:66163584-66163603 | None:intergenic | 40.0% | |
| GAGAGATTCTACTCTCTTCA+TGG | + | chr7.1:66162174-66162193 | None:intergenic | 40.0% | |
| GAGGCTTAGCTAGTTAGTTA+AGG | - | chr7.1:66161342-66161361 | MS.gene060420:intron | 40.0% | |
| GAGTCTCGACAAATTGGTAT+CGG | - | chr7.1:66162499-66162518 | MS.gene060420:CDS | 40.0% | |
| GATTTGGATGCTATCGATCT+TGG | - | chr7.1:66160772-66160791 | MS.gene060420:intron | 40.0% | |
| GCTGTCCTAACTTTCACATT+TGG | + | chr7.1:66164391-66164410 | None:intergenic | 40.0% | |
| GGTACACTTGAAGATACTTC+TGG | - | chr7.1:66160793-66160812 | MS.gene060420:intron | 40.0% | |
| GGTTCTTCCTTGTGAAACTT+GGG | + | chr7.1:66165417-66165436 | None:intergenic | 40.0% | |
| GTCATTATGCCAAATGGATC+AGG | - | chr7.1:66162780-66162799 | MS.gene060420:intron | 40.0% | |
| GTGCAACAAAAGGAAGCTTA+TGG | - | chr7.1:66165839-66165858 | MS.gene060420:CDS | 40.0% | |
| TAGTGAGCAAAGCTTTACAG+TGG | - | chr7.1:66164665-66164684 | MS.gene060420:intron | 40.0% | |
| TATCGGGCATAATATGGCAA+TGG | - | chr7.1:66162516-66162535 | MS.gene060420:CDS | 40.0% | |
| TCAAGCAAAGAGAGACGTAA+TGG | + | chr7.1:66163993-66164012 | None:intergenic | 40.0% | |
| TCAATTGGAAGGCCAAAACA+AGG | - | chr7.1:66163264-66163283 | MS.gene060420:CDS | 40.0% | |
| TCGACAACAAATAACTGCTC+CGG | + | chr7.1:66164847-66164866 | None:intergenic | 40.0% | |
| TCTCTTTGACAACAGAAGAC+TGG | + | chr7.1:66162864-66162883 | None:intergenic | 40.0% | |
| TCTTGTCTTCTGTTTACTCC+TGG | - | chr7.1:66165011-66165030 | MS.gene060420:intron | 40.0% | |
| TGAAACTTAGACTGAGGAGT+TGG | + | chr7.1:66162922-66162941 | None:intergenic | 40.0% | |
| TGTGCCCAAATGTGAAAGTT+AGG | - | chr7.1:66164383-66164402 | MS.gene060420:CDS | 40.0% | |
| TTCAAGGCAGTTCAATTGGA+AGG | - | chr7.1:66163253-66163272 | MS.gene060420:CDS | 40.0% | |
| TTGAACTAGTCCTGTGTTCT+AGG | + | chr7.1:66163662-66163681 | None:intergenic | 40.0% | |
| ! | ATAGTTTCTGAGAACCTTGG+AGG | + | chr7.1:66164286-66164305 | None:intergenic | 40.0% |
| ! | CGTATAGTTTCTGAGAACCT+TGG | + | chr7.1:66164289-66164308 | None:intergenic | 40.0% |
| ! | TCCATTTCAGGGTACTCAAA+AGG | - | chr7.1:66163928-66163947 | MS.gene060420:CDS | 40.0% |
| ! | TGTACTTTTCAGCCATAAGG+TGG | + | chr7.1:66161925-66161944 | None:intergenic | 40.0% |
| !! | ATAGCCTTGCTGATTCTTTC+CGG | + | chr7.1:66165439-66165458 | None:intergenic | 40.0% |
| !! | GAACACAGGACTAGTTCAAA+AGG | - | chr7.1:66163663-66163682 | MS.gene060420:CDS | 40.0% |
| !! | GATTGCAACAAGGTGCTTTT+TGG | - | chr7.1:66160667-66160686 | MS.gene060420:intron | 40.0% |
| !! | TCCTTTTGAGTACCCTGAAA+TGG | + | chr7.1:66163932-66163951 | None:intergenic | 40.0% |
| !!! | GCAGTTTGACGATTTTGGTT+TGG | - | chr7.1:66161877-66161896 | MS.gene060420:intron | 40.0% |
| AAAGATTGCTCGCTCTCATG+GGG | + | chr7.1:66164469-66164488 | None:intergenic | 45.0% | |
| AACAAAGAGTAACACGCCTG+TGG | - | chr7.1:66160711-66160730 | MS.gene060420:intron | 45.0% | |
| AAGAGAGACGTAATGGTCTG+TGG | + | chr7.1:66163986-66164005 | None:intergenic | 45.0% | |
| ACAAATAACTGCTCCGGAAG+TGG | + | chr7.1:66164841-66164860 | None:intergenic | 45.0% | |
| ACGAAAACTCTACCAGAGTC+AGG | - | chr7.1:66164214-66164233 | MS.gene060420:CDS | 45.0% | |
| AGAGAGTAGAATCTCTCGAG+AGG | - | chr7.1:66162408-66162427 | MS.gene060420:intron | 45.0% | |
| AGATCCAGGGAAACAAAACG+AGG | - | chr7.1:66165373-66165392 | MS.gene060420:intron | 45.0% | |
| ATATCGAGGCCTAACTATGC+AGG | + | chr7.1:66164875-66164894 | None:intergenic | 45.0% | |
| CAAAGATTGCTCGCTCTCAT+GGG | + | chr7.1:66164470-66164489 | None:intergenic | 45.0% | |
| GAGATATCCAAGCACTCTGT+AGG | + | chr7.1:66160596-66160615 | None:intergenic | 45.0% | |
| GATCAGGAAAATGTTGGCGT+TGG | - | chr7.1:66162796-66162815 | MS.gene060420:intron | 45.0% | |
| GCCCGGAACAAGAATAAATG+TGG | + | chr7.1:66164752-66164771 | None:intergenic | 45.0% | |
| GGAAAGGAATGCTGATATGG+TGG | - | chr7.1:66164489-66164508 | MS.gene060420:intron | 45.0% | |
| GGAGGAATTTCGATATGGTC+TGG | + | chr7.1:66164268-66164287 | None:intergenic | 45.0% | |
| GGGTTCTTCCTTGTGAAACT+TGG | + | chr7.1:66165418-66165437 | None:intergenic | 45.0% | |
| GTGCTTGGATATCTCCTTTC+TGG | - | chr7.1:66160601-66160620 | MS.gene060420:CDS | 45.0% | |
| GTGTCTCAGTCTCAAACTTG+TGG | - | chr7.1:66164319-66164338 | MS.gene060420:CDS | 45.0% | |
| TATCCGGTCAAAATGTGGAC+GGG | - | chr7.1:66162146-66162165 | MS.gene060420:CDS | 45.0% | |
| TCAACAATTGTGGACTCTGC+AGG | + | chr7.1:66163003-66163022 | None:intergenic | 45.0% | |
| TTCACATTTGGGCACAAAGG+AGG | + | chr7.1:66164379-66164398 | None:intergenic | 45.0% | |
| TTTGGGAACACAGAAGGAAG+CGG | - | chr7.1:66162453-66162472 | MS.gene060420:CDS | 45.0% | |
| TTTGGGAAGACAGAAGGAAG+CGG | - | chr7.1:66162222-66162241 | MS.gene060420:CDS | 45.0% | |
| ! | AATGGTTTGGGTATAGAGGG+AGG | - | chr7.1:66163804-66163823 | MS.gene060420:CDS | 45.0% |
| ! | AGAGCGAGCAATCTTTGGAA+AGG | - | chr7.1:66164473-66164492 | MS.gene060420:intron | 45.0% |
| ! | ATTCTTTTCCTTCGGCAGCT+GGG | - | chr7.1:66165212-66165231 | MS.gene060420:intron | 45.0% |
| ! | CATGCAGTTTTCTCAGGAGA+GGG | - | chr7.1:66161055-66161074 | MS.gene060420:CDS | 45.0% |
| ! | GAATGCTGATATGGTGGAAG+AGG | - | chr7.1:66164495-66164514 | MS.gene060420:intron | 45.0% |
| ! | GATTCTGTTGCAGTTGGTGT+AGG | + | chr7.1:66163448-66163467 | None:intergenic | 45.0% |
| ! | GGGATTCATGCAGTTTTCTC+AGG | - | chr7.1:66161049-66161068 | MS.gene060420:CDS | 45.0% |
| ! | TCATGCAGTTTTCTCAGGAG+AGG | - | chr7.1:66161054-66161073 | MS.gene060420:CDS | 45.0% |
| ! | TCTGTTGTCAAAGAGAGCGT+CGG | - | chr7.1:66162868-66162887 | MS.gene060420:intron | 45.0% |
| !! | CCACATTTTGACCGGATATG+CGG | + | chr7.1:66162144-66162163 | None:intergenic | 45.0% |
| !! | GAACTCGTCCACATTTTGAC+TGG | + | chr7.1:66162383-66162402 | None:intergenic | 45.0% |
| !! | TAGCCTTGCTGATTCTTTCC+GGG | + | chr7.1:66165438-66165457 | None:intergenic | 45.0% |
| !!! | CCACATTTTGACTGGATACG+CGG | + | chr7.1:66162375-66162394 | None:intergenic | 45.0% |
| AAGCCAACAACCATCTCACC+TGG | + | chr7.1:66165251-66165270 | None:intergenic | 50.0% | |
| AAGGTCCTTCTAACACTGCG+TGG | - | chr7.1:66165182-66165201 | MS.gene060420:intron | 50.0% | |
| ATGCCTGCTCCGATGATGTT+CGG | - | chr7.1:66164793-66164812 | MS.gene060420:intron | 50.0% | |
| CATCACACCTTGTCCACTTC+CGG | - | chr7.1:66164825-66164844 | MS.gene060420:intron | 50.0% | |
| CCAAAGATTGCTCGCTCTCA+TGG | + | chr7.1:66164471-66164490 | None:intergenic | 50.0% | |
| CCATGAGAGCGAGCAATCTT+TGG | - | chr7.1:66164468-66164487 | MS.gene060420:intron | 50.0% | |
| CCGCATATCCGGTCAAAATG+TGG | - | chr7.1:66162141-66162160 | MS.gene060420:CDS | 50.0% | |
| CCGCGTATCCAGTCAAAATG+TGG | - | chr7.1:66162372-66162391 | MS.gene060420:intron | 50.0% | |
| CGAGCAGATTCTGTTGCAGT+TGG | + | chr7.1:66163454-66163473 | None:intergenic | 50.0% | |
| CTGCTCTCTTGACCACCTTA+TGG | - | chr7.1:66161910-66161929 | MS.gene060420:intron | 50.0% | |
| GAACCAGGTGAGATGGTTGT+TGG | - | chr7.1:66165245-66165264 | MS.gene060420:intron | 50.0% | |
| GAACCCGGAAAGAATCAGCA+AGG | - | chr7.1:66165432-66165451 | MS.gene060420:CDS | 50.0% | |
| GACATGCGCAATTTCTCCAC+AGG | + | chr7.1:66160730-66160749 | None:intergenic | 50.0% | |
| TCTACCAGAGTCAGGTGTGT+CGG | - | chr7.1:66164222-66164241 | MS.gene060420:CDS | 50.0% | |
| ! | GATTCTTTTCCTTCGGCAGC+TGG | - | chr7.1:66165211-66165230 | MS.gene060420:intron | 50.0% |
| ! | GCTGTTTCCTACAGAGTGCT+TGG | - | chr7.1:66160586-66160605 | MS.gene060420:CDS | 50.0% |
| !! | GAACCCGTCCACATTTTGAC+CGG | + | chr7.1:66162152-66162171 | None:intergenic | 50.0% |
| !! | TTTGTTCTGGGGGAGCAGTA+TGG | + | chr7.1:66160912-66160931 | None:intergenic | 50.0% |
| AACTGCTCCGGAAGTGGACA+AGG | + | chr7.1:66164835-66164854 | None:intergenic | 55.0% | |
| AGGACTTGAGCTTTGCGGAG+TGG | + | chr7.1:66164150-66164169 | None:intergenic | 55.0% | |
| CCAGGGAAACAAAACGAGGC+AGG | - | chr7.1:66165377-66165396 | MS.gene060420:intron | 55.0% | |
| CGGAAGTGGACAAGGTGTGA+TGG | + | chr7.1:66164827-66164846 | None:intergenic | 55.0% | |
| GACAGTGGCCCGAACATCAT+CGG | + | chr7.1:66164805-66164824 | None:intergenic | 55.0% | |
| GATTCCGACACACCTGACTC+TGG | + | chr7.1:66164229-66164248 | None:intergenic | 55.0% | |
| TCGACCACGCCTGCATAGTT+AGG | - | chr7.1:66164863-66164882 | MS.gene060420:intron | 55.0% | |
| TCGCTCTCATGGGGACTTGA+AGG | + | chr7.1:66164460-66164479 | None:intergenic | 55.0% | |
| TCTGAGCGAACCAGGTGAGA+TGG | - | chr7.1:66165238-66165257 | MS.gene060420:intron | 55.0% | |
| TGCCTGCTCCGATGATGTTC+GGG | - | chr7.1:66164794-66164813 | MS.gene060420:intron | 55.0% | |
| !! | GGACAAGGTGTGATGGACAG+TGG | + | chr7.1:66164820-66164839 | None:intergenic | 55.0% |
| !! | GGGCACAAAGGAGGTGTTTC+TGG | + | chr7.1:66164370-66164389 | None:intergenic | 55.0% |
| !!! | CCTGCCTCGTTTTGTTTCCC+TGG | + | chr7.1:66165380-66165399 | None:intergenic | 55.0% |
| GAGGCCTAACTATGCAGGCG+TGG | + | chr7.1:66164870-66164889 | None:intergenic | 60.0% | |
| TCTTGTTCCGGGCTGTCCAG+AGG | - | chr7.1:66164759-66164778 | MS.gene060420:intron | 60.0% | |
| ! | CTTTTCCTTCGGCAGCTGGG+TGG | - | chr7.1:66165215-66165234 | MS.gene060420:intron | 60.0% |
| CTGGGTGGTCTGAGCGAACC+AGG | - | chr7.1:66165230-66165249 | MS.gene060420:intron | 65.0% | |
| GGCCCGAACATCATCGGAGC+AGG | + | chr7.1:66164799-66164818 | None:intergenic | 65.0% | |
| TCAGACCACCCAGCTGCCGA+AGG | + | chr7.1:66165223-66165242 | None:intergenic | 65.0% | |
| GCTGCGGCCTCTGGACAGCC+CGG | + | chr7.1:66164769-66164788 | None:intergenic | 75.0% | |
| GGGCTGTCCAGAGGCCGCAG+CGG | - | chr7.1:66164768-66164787 | MS.gene060420:intron | 75.0% | |
| ! | CGGAGCAGGCATCGCCGCTG+CGG | + | chr7.1:66164785-66164804 | None:intergenic | 75.0% |
| ! | GGCATCGCCGCTGCGGCCTC+TGG | + | chr7.1:66164778-66164797 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 66160580 | 66165913 | 66160580 | ID=MS.gene060420 |
| chr7.1 | mRNA | 66160580 | 66165913 | 66160580 | ID=MS.gene060420.t1;Parent=MS.gene060420 |
| chr7.1 | exon | 66165678 | 66165913 | 66165678 | ID=MS.gene060420.t1.exon1;Parent=MS.gene060420.t1 |
| chr7.1 | CDS | 66165678 | 66165913 | 66165678 | ID=cds.MS.gene060420.t1;Parent=MS.gene060420.t1 |
| chr7.1 | exon | 66165550 | 66165587 | 66165550 | ID=MS.gene060420.t1.exon2;Parent=MS.gene060420.t1 |
| chr7.1 | CDS | 66165550 | 66165587 | 66165550 | ID=cds.MS.gene060420.t1;Parent=MS.gene060420.t1 |
| chr7.1 | exon | 66165417 | 66165463 | 66165417 | ID=MS.gene060420.t1.exon3;Parent=MS.gene060420.t1 |
| chr7.1 | CDS | 66165417 | 66165463 | 66165417 | ID=cds.MS.gene060420.t1;Parent=MS.gene060420.t1 |
| chr7.1 | exon | 66164554 | 66164612 | 66164554 | ID=MS.gene060420.t1.exon4;Parent=MS.gene060420.t1 |
| chr7.1 | CDS | 66164554 | 66164612 | 66164554 | ID=cds.MS.gene060420.t1;Parent=MS.gene060420.t1 |
| chr7.1 | exon | 66163208 | 66164445 | 66163208 | ID=MS.gene060420.t1.exon5;Parent=MS.gene060420.t1 |
| chr7.1 | CDS | 66163208 | 66164445 | 66163208 | ID=cds.MS.gene060420.t1;Parent=MS.gene060420.t1 |
| chr7.1 | exon | 66162966 | 66163083 | 66162966 | ID=MS.gene060420.t1.exon6;Parent=MS.gene060420.t1 |
| chr7.1 | CDS | 66162966 | 66163083 | 66162966 | ID=cds.MS.gene060420.t1;Parent=MS.gene060420.t1 |
| chr7.1 | exon | 66162419 | 66162555 | 66162419 | ID=MS.gene060420.t1.exon7;Parent=MS.gene060420.t1 |
| chr7.1 | CDS | 66162419 | 66162555 | 66162419 | ID=cds.MS.gene060420.t1;Parent=MS.gene060420.t1 |
| chr7.1 | exon | 66161977 | 66162347 | 66161977 | ID=MS.gene060420.t1.exon8;Parent=MS.gene060420.t1 |
| chr7.1 | CDS | 66161977 | 66162347 | 66161977 | ID=cds.MS.gene060420.t1;Parent=MS.gene060420.t1 |
| chr7.1 | exon | 66161780 | 66161866 | 66161780 | ID=MS.gene060420.t1.exon9;Parent=MS.gene060420.t1 |
| chr7.1 | CDS | 66161780 | 66161866 | 66161780 | ID=cds.MS.gene060420.t1;Parent=MS.gene060420.t1 |
| chr7.1 | exon | 66161376 | 66161412 | 66161376 | ID=MS.gene060420.t1.exon10;Parent=MS.gene060420.t1 |
| chr7.1 | CDS | 66161376 | 66161412 | 66161376 | ID=cds.MS.gene060420.t1;Parent=MS.gene060420.t1 |
| chr7.1 | exon | 66161242 | 66161263 | 66161242 | ID=MS.gene060420.t1.exon11;Parent=MS.gene060420.t1 |
| chr7.1 | CDS | 66161242 | 66161263 | 66161242 | ID=cds.MS.gene060420.t1;Parent=MS.gene060420.t1 |
| chr7.1 | exon | 66161021 | 66161153 | 66161021 | ID=MS.gene060420.t1.exon12;Parent=MS.gene060420.t1 |
| chr7.1 | CDS | 66161021 | 66161153 | 66161021 | ID=cds.MS.gene060420.t1;Parent=MS.gene060420.t1 |
| chr7.1 | exon | 66160580 | 66160681 | 66160580 | ID=MS.gene060420.t1.exon13;Parent=MS.gene060420.t1 |
| chr7.1 | CDS | 66160580 | 66160681 | 66160580 | ID=cds.MS.gene060420.t1;Parent=MS.gene060420.t1 |
| Gene Sequence |
| Protein sequence |
