Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060776.t1 | AES63022.2 | 79.7 | 595 | 39 | 4 | 116 | 629 | 241 | 834 | 2.20E-235 | 825.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060776.t1 | Q9C7E7 | 59.4 | 567 | 165 | 7 | 120 | 626 | 225 | 786 | 1.9e-158 | 560.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060776.t1 | G7IF06 | 79.7 | 595 | 39 | 4 | 116 | 629 | 241 | 834 | 1.6e-235 | 825.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060774 | MS.gene060776 | 0.910363 | 2.04E-82 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060776.t1 | MTR_1g115920 | 92.888 | 464 | 29 | 2 | 169 | 629 | 372 | 834 | 0.0 | 805 |
| MS.gene060776.t1 | MTR_1g115920 | 86.179 | 123 | 9 | 4 | 1 | 117 | 26 | 146 | 2.82e-51 | 190 |
| MS.gene060776.t1 | MTR_4g094355 | 80.851 | 282 | 18 | 4 | 75 | 356 | 6 | 251 | 6.72e-138 | 410 |
| MS.gene060776.t1 | MTR_4g094355 | 93.194 | 191 | 13 | 0 | 439 | 629 | 250 | 440 | 6.06e-123 | 371 |
| MS.gene060776.t1 | MTR_5g039050 | 84.305 | 223 | 26 | 3 | 319 | 541 | 67 | 280 | 2.80e-112 | 343 |
| MS.gene060776.t1 | MTR_5g039050 | 82.222 | 45 | 7 | 1 | 181 | 224 | 6 | 50 | 1.56e-14 | 76.6 |
| MS.gene060776.t1 | MTR_5g039100 | 71.698 | 106 | 19 | 4 | 15 | 117 | 7 | 104 | 2.49e-31 | 121 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060776.t1 | AT1G28060 | 66.811 | 461 | 146 | 4 | 169 | 626 | 330 | 786 | 0.0 | 609 |
| MS.gene060776.t1 | AT1G28060 | 66.811 | 461 | 146 | 4 | 169 | 626 | 330 | 786 | 0.0 | 609 |
| MS.gene060776.t1 | AT1G28060 | 66.811 | 461 | 146 | 4 | 169 | 626 | 330 | 786 | 0.0 | 609 |
| MS.gene060776.t1 | AT3G55930 | 62.222 | 270 | 98 | 3 | 356 | 623 | 3 | 270 | 2.51e-98 | 301 |
| MS.gene060776.t1 | AT3G55935 | 69.048 | 42 | 13 | 0 | 181 | 222 | 88 | 129 | 4.72e-11 | 61.6 |
Find 165 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTCTATCTTTCCTCTTA+TGG | 0.082462 | 4.4:+70874497 | None:intergenic |
| CCACACCAGAACACATTTAT+TGG | 0.127318 | 4.4:+70873016 | None:intergenic |
| TTCTCTATCTTTCCTCTTAT+GGG | 0.172655 | 4.4:+70874498 | None:intergenic |
| ATAAAATTGAAGAGTAAATT+TGG | 0.190886 | 4.4:-70873896 | MS.gene060776:CDS |
| TGGATGATGATAAGAGAATT+AGG | 0.216295 | 4.4:-70874453 | MS.gene060776:CDS |
| TGCTGGGGTTCCTCATTATT+GGG | 0.233213 | 4.4:-70872907 | MS.gene060776:CDS |
| ATGCTGGGGTTCCTCATTAT+TGG | 0.242299 | 4.4:-70872908 | MS.gene060776:CDS |
| ACACACTTGTCTCACTTTAC+AGG | 0.257138 | 4.4:-70873256 | MS.gene060776:CDS |
| CCCTGTCTCTGCTTCCTTCT+CGG | 0.262332 | 4.4:+70874611 | None:intergenic |
| ACAAGTGTGTCCAATGTATT+TGG | 0.267435 | 4.4:+70873269 | None:intergenic |
| CTCATCTTGACCTTTGGTTT+TGG | 0.279974 | 4.4:+70873464 | None:intergenic |
| TCACCTTCGCTATACGCCTT+TGG | 0.285493 | 4.4:+70873528 | None:intergenic |
| AGGAAGCAGAGACAGGGATA+TGG | 0.287407 | 4.4:-70874605 | MS.gene060776:CDS |
| CTTTGCTAGCTGTGCTTGTT+TGG | 0.291419 | 4.4:+70873847 | None:intergenic |
| CACCTTCGCTATACGCCTTT+GGG | 0.299961 | 4.4:+70873529 | None:intergenic |
| CTCGGTCTTCTCTGTGATTC+CGG | 0.301582 | 4.4:+70874629 | None:intergenic |
| TCCTGTTTAGTTGGCTTGAT+AGG | 0.304342 | 4.4:+70873569 | None:intergenic |
| ATTAAGTTCGGATTGATATC+AGG | 0.315138 | 4.4:+70873812 | None:intergenic |
| AAGCAACCTTAGCACATTAA+AGG | 0.318390 | 4.4:-70874101 | MS.gene060776:CDS |
| TTCTTCTGCTCCTGTTTAGT+TGG | 0.318787 | 4.4:+70873560 | None:intergenic |
| CATCAGAATCGTGCCGGTTC+CGG | 0.331455 | 4.4:+70874674 | None:intergenic |
| GTTCATCTATTTCACGTCCC+TGG | 0.343803 | 4.4:+70874152 | None:intergenic |
| GGTGGAGAGGCGGGCTCAGC+AGG | 0.346160 | 4.4:+70873599 | None:intergenic |
| TGAAATACTAAAACCTGTAT+TGG | 0.355353 | 4.4:-70874047 | MS.gene060776:CDS |
| GAACCTATTGAAGCTCGATT+TGG | 0.361063 | 4.4:+70872980 | None:intergenic |
| AGATGAAGGCAATATGAAAA+TGG | 0.363556 | 4.4:-70873666 | MS.gene060776:CDS |
| TGCAGCTGCTGAGCGTGAGC+AGG | 0.369144 | 4.4:-70873372 | MS.gene060776:CDS |
| GGATGATGATAAGAGAATTA+GGG | 0.370764 | 4.4:-70874452 | MS.gene060776:CDS |
| AAGAAGGAACGTAGGAGATT+TGG | 0.374683 | 4.4:-70874418 | MS.gene060776:CDS |
| AAATTACTCATCTTGACCTT+TGG | 0.381357 | 4.4:+70873458 | None:intergenic |
| ACCGTAACCATCACCGGAAC+CGG | 0.388029 | 4.4:-70874687 | MS.gene060776:CDS |
| TGTTTGTGGAGGAAGGAAAA+TGG | 0.392737 | 4.4:-70873937 | MS.gene060776:CDS |
| TCTGTAATTTCTATTAAGTT+CGG | 0.393587 | 4.4:+70873800 | None:intergenic |
| AGCAAGTCAATTAAGAGGTA+TGG | 0.404160 | 4.4:-70873113 | MS.gene060776:CDS |
| TTCTTCTCACGCAGCTCAGC+AGG | 0.405655 | 4.4:+70873314 | None:intergenic |
| TTGCCAAATCGAGCTTCAAT+AGG | 0.406342 | 4.4:-70872983 | MS.gene060776:CDS |
| TCAAAATGAGGATTAGATTC+AGG | 0.407433 | 4.4:+70874016 | None:intergenic |
| ACCTATCAAGCCAACTAAAC+AGG | 0.413749 | 4.4:-70873570 | MS.gene060776:CDS |
| TTCATCTATTTCACGTCCCT+GGG | 0.414957 | 4.4:+70874153 | None:intergenic |
| ATAAACTCTAGAGCGGGCCT+TGG | 0.420863 | 4.4:+70873214 | None:intergenic |
| GAATCTACAGCTATGTTTCC+TGG | 0.422589 | 4.4:-70874244 | MS.gene060776:CDS |
| CTCGATACTCCTCCCATAAG+AGG | 0.423418 | 4.4:-70874510 | MS.gene060776:CDS |
| ACCGAGAAGGAAGCAGAGAC+AGG | 0.430015 | 4.4:-70874612 | MS.gene060776:CDS |
| TTTAATGTGCTAAGGTTGCT+TGG | 0.430099 | 4.4:+70874103 | None:intergenic |
| ATATAGCGAGGATCGGGAAT+TGG | 0.430571 | 4.4:-70874473 | MS.gene060776:CDS |
| CACCACTCAATATCCGGAAT+CGG | 0.431295 | 4.4:+70873746 | None:intergenic |
| GGAAGCAGAGACAGGGATAT+GGG | 0.431480 | 4.4:-70874604 | MS.gene060776:CDS |
| GGCTCAGCAGGCGGTTCAAT+AGG | 0.433119 | 4.4:+70873611 | None:intergenic |
| TAACGTCGGGTGTAGCAATC+TGG | 0.434175 | 4.4:+70874221 | None:intergenic |
| CAAAGCTCCTGCGGCCTAAG+AGG | 0.436122 | 4.4:-70873970 | MS.gene060776:CDS |
| TGTTCTTCGTCTTGACGCCC+AGG | 0.441585 | 4.4:-70874170 | MS.gene060776:CDS |
| CGATGCCAATAAATGTGTTC+TGG | 0.441704 | 4.4:-70873021 | MS.gene060776:CDS |
| GTTACGGTCGCGGTCATGTT+CGG | 0.446270 | 4.4:+70874702 | None:intergenic |
| AACAGAAAATTCATCCTCTT+AGG | 0.449563 | 4.4:+70873956 | None:intergenic |
| AAAACTGAAGGACCCGATTC+CGG | 0.455391 | 4.4:-70873759 | MS.gene060776:CDS |
| ACGTCCCACCACTCAATATC+CGG | 0.458176 | 4.4:+70873740 | None:intergenic |
| TAGGGTTTCTGAAGCAAAGA+AGG | 0.462240 | 4.4:-70874434 | MS.gene060776:CDS |
| GCCGGTTCCGGTGATGGTTA+CGG | 0.466812 | 4.4:+70874686 | None:intergenic |
| TCCGGTGATGGTTACGGTCG+CGG | 0.470181 | 4.4:+70874692 | None:intergenic |
| TGCTGAGCTGCGTGAGAAGA+AGG | 0.474449 | 4.4:-70873312 | MS.gene060776:CDS |
| CATTTGTATAGTTGACAGCT+TGG | 0.476752 | 4.4:+70872883 | None:intergenic |
| GGTTGAGGTGGTGGAGAGGC+GGG | 0.476862 | 4.4:+70873590 | None:intergenic |
| GTTAGCGTTGTCGTGGTTGA+AGG | 0.477825 | 4.4:-70873140 | MS.gene060776:CDS |
| AGAAGAATATAGCGAGGATC+GGG | 0.478819 | 4.4:-70874479 | MS.gene060776:CDS |
| AATCGTGCCGGTTCCGGTGA+TGG | 0.479993 | 4.4:+70874680 | None:intergenic |
| AGGAGATTTGGTGATAAACT+TGG | 0.481118 | 4.4:-70874406 | MS.gene060776:CDS |
| CACACTTGTCTCACTTTACA+GGG | 0.483911 | 4.4:-70873255 | MS.gene060776:CDS |
| GTGAGCAGGCTCACATAGAT+AGG | 0.485650 | 4.4:-70873358 | MS.gene060776:CDS |
| TTCAGAAGAAAGCACACAGT+TGG | 0.488397 | 4.4:-70874278 | MS.gene060776:CDS |
| GCTCAACAAAATCGTTTGAC+TGG | 0.491510 | 4.4:-70873185 | MS.gene060776:CDS |
| ATGTTCGGAGTGTCGCCTAT+CGG | 0.492896 | 4.4:+70874717 | None:intergenic |
| AGTAATTTACATAAGGTGCT+AGG | 0.498879 | 4.4:-70873443 | MS.gene060776:CDS |
| TGGGCGTCAAGACGAAGAAC+AGG | 0.500740 | 4.4:+70874172 | None:intergenic |
| AGATCCCACCAGGCTTGAAA+AGG | 0.500964 | 4.4:-70873405 | MS.gene060776:CDS |
| TCAGGATCGACATCCAATAC+AGG | 0.501479 | 4.4:+70874034 | None:intergenic |
| CAAGATGAGTAATTTACATA+AGG | 0.502552 | 4.4:-70873450 | MS.gene060776:CDS |
| AGGTTGAGGTGGTGGAGAGG+CGG | 0.504638 | 4.4:+70873589 | None:intergenic |
| GCCTTCATCTATAGTACCGT+TGG | 0.504964 | 4.4:+70873679 | None:intergenic |
| GGAGCCTTGGTTGGTTTCTG+AGG | 0.506975 | 4.4:+70874193 | None:intergenic |
| TCAGAAGAAAGCACACAGTT+GGG | 0.507761 | 4.4:-70874277 | MS.gene060776:CDS |
| TGCCTTAGCAAAGGCTAAGA+AGG | 0.507867 | 4.4:-70874365 | MS.gene060776:CDS |
| ACCACTCAATATCCGGAATC+GGG | 0.511345 | 4.4:+70873747 | None:intergenic |
| GCAAGTCAATTAAGAGGTAT+GGG | 0.512247 | 4.4:-70873112 | MS.gene060776:CDS |
| CAAGTGTGTCCAATGTATTT+GGG | 0.514012 | 4.4:+70873270 | None:intergenic |
| TAAACTCTAGAGCGGGCCTT+GGG | 0.515382 | 4.4:+70873215 | None:intergenic |
| CGAAGAACAGGAGCCTTGGT+TGG | 0.517067 | 4.4:+70874184 | None:intergenic |
| TTATGCTTAGACGTATCAAA+TGG | 0.519358 | 4.4:-70873085 | MS.gene060776:CDS |
| GTGGAAGCAAGTCAATTAAG+AGG | 0.522404 | 4.4:-70873118 | MS.gene060776:CDS |
| GGCTTGATAGGTTGAGGTGG+TGG | 0.526396 | 4.4:+70873581 | None:intergenic |
| ATCGAAGCGCGATGAAGAGA+GGG | 0.529353 | 4.4:-70874539 | MS.gene060776:CDS |
| GTTTCATGACCCAAATACAT+TGG | 0.529532 | 4.4:-70873279 | MS.gene060776:CDS |
| ACTTTCATGTGGAACATCCT+CGG | 0.530971 | 4.4:-70873634 | MS.gene060776:CDS |
| GAGCCTTGGTTGGTTTCTGA+GGG | 0.533893 | 4.4:+70874194 | None:intergenic |
| AGCTCAAGCAAAAGAGCAGA+AGG | 0.535132 | 4.4:-70873870 | MS.gene060776:CDS |
| GATGAAAGAGAGGGTAGCAA+AGG | 0.535514 | 4.4:-70874571 | MS.gene060776:CDS |
| GGATATTGAGTGGTGGGACG+TGG | 0.536150 | 4.4:-70873738 | MS.gene060776:CDS |
| ACCGCGACCGTAACCATCAC+CGG | 0.538461 | 4.4:-70874693 | MS.gene060776:CDS |
| GAGGGATGTTTCAAAAGAGA+AGG | 0.538571 | 4.4:-70873063 | MS.gene060776:CDS |
| TCTATCTTTCCTCTTATGGG+AGG | 0.540828 | 4.4:+70874501 | None:intergenic |
| GAGAAGAATATAGCGAGGAT+CGG | 0.548197 | 4.4:-70874480 | MS.gene060776:CDS |
| CCCATTCTCTCATCAAAATG+AGG | 0.549338 | 4.4:+70874004 | None:intergenic |
| CAAACAAGCACAGCTAGCAA+AGG | 0.555686 | 4.4:-70873846 | MS.gene060776:CDS |
| TTCTGAGGGACAGTAACGTC+GGG | 0.556866 | 4.4:+70874208 | None:intergenic |
| AAGACGAAGAACAGGAGCCT+TGG | 0.557281 | 4.4:+70874180 | None:intergenic |
| TTCATCTATAGTACCGTTGG+CGG | 0.558630 | 4.4:+70873682 | None:intergenic |
| AATCGAAGCGCGATGAAGAG+AGG | 0.561052 | 4.4:-70874540 | MS.gene060776:CDS |
| GGAGAGGCGGGCTCAGCAGG+CGG | 0.561936 | 4.4:+70873602 | None:intergenic |
| TGTTGACCTTTAATGTGCTA+AGG | 0.561959 | 4.4:+70874095 | None:intergenic |
| GTTCTTCGTCTTGACGCCCA+GGG | 0.562372 | 4.4:-70874169 | MS.gene060776:CDS |
| TCGGGTGTAGCAATCTGGCC+AGG | 0.563408 | 4.4:+70874226 | None:intergenic |
| AATTCATCCTCTTAGGCCGC+AGG | 0.563858 | 4.4:+70873963 | None:intergenic |
| GTAATTTACATAAGGTGCTA+GGG | 0.564338 | 4.4:-70873442 | MS.gene060776:CDS |
| GACCCAAAGGCGTATAGCGA+AGG | 0.574739 | 4.4:-70873531 | MS.gene060776:CDS |
| TTAGTTGGCTTGATAGGTTG+AGG | 0.576255 | 4.4:+70873575 | None:intergenic |
| GGAAGAATTCAACTTTCATG+TGG | 0.576369 | 4.4:-70873645 | MS.gene060776:CDS |
| AGCCTTCTTAGCCTTTGCTA+AGG | 0.581971 | 4.4:+70874363 | None:intergenic |
| GGTCAGATCGATGATGGCGG+TGG | 0.582301 | 4.4:+70874650 | None:intergenic |
| CCGAGAAGGAAGCAGAGACA+GGG | 0.584656 | 4.4:-70874611 | MS.gene060776:CDS |
| GTTGGCTTGATAGGTTGAGG+TGG | 0.586185 | 4.4:+70873578 | None:intergenic |
| GCCAACGGTACTATAGATGA+AGG | 0.586217 | 4.4:-70873680 | MS.gene060776:CDS |
| CTAAGGCATCACTACTAGAG+AGG | 0.588190 | 4.4:+70874380 | None:intergenic |
| GATTCCGGTCAGATCGATGA+TGG | 0.589596 | 4.4:+70874644 | None:intergenic |
| ATTAACATAAACTCTAGAGC+GGG | 0.591581 | 4.4:+70873208 | None:intergenic |
| TGCTTAGACGTATCAAATGG+AGG | 0.592616 | 4.4:-70873082 | MS.gene060776:CDS |
| TACGATGGAGATGAAAGAGA+GGG | 0.594112 | 4.4:-70874580 | MS.gene060776:CDS |
| AAAGAGAGGGTAGCAAAGGT+AGG | 0.594676 | 4.4:-70874567 | MS.gene060776:CDS |
| TATGGTGACATTGCCGCCAA+CGG | 0.595136 | 4.4:-70873695 | MS.gene060776:CDS |
| GGATGTGCGGTGATTTGTGA+TGG | 0.599326 | 4.4:-70873164 | MS.gene060776:CDS |
| AGCTGCGTGAGAAGAAGGAA+AGG | 0.600382 | 4.4:-70873307 | MS.gene060776:CDS |
| ATACGATGGAGATGAAAGAG+AGG | 0.606005 | 4.4:-70874581 | MS.gene060776:CDS |
| GACAGGGATATGGGATACGA+TGG | 0.607091 | 4.4:-70874595 | MS.gene060776:CDS |
| GGTGGTCATCAGAATCGTGC+CGG | 0.608684 | 4.4:+70874668 | None:intergenic |
| ACCGCCATCATCGATCTGAC+CGG | 0.610844 | 4.4:-70874648 | MS.gene060776:CDS |
| GCTTAGACGTATCAAATGGA+GGG | 0.611542 | 4.4:-70873081 | MS.gene060776:CDS |
| CGATTCCGGATATTGAGTGG+TGG | 0.614030 | 4.4:-70873745 | MS.gene060776:CDS |
| TGATGGTGTTAGCGTTGTCG+TGG | 0.615588 | 4.4:-70873147 | MS.gene060776:CDS |
| AAATGACCTCTCTCATCCCA+AGG | 0.616566 | 4.4:-70873231 | MS.gene060776:CDS |
| TGTAATGAAAGCAAAACTGA+AGG | 0.617069 | 4.4:-70873771 | MS.gene060776:CDS |
| ACAGCTTGGTCCCAATAATG+AGG | 0.617442 | 4.4:+70872897 | None:intergenic |
| GAATTTGAGTTATTCAACTG+AGG | 0.620565 | 4.4:+70874298 | None:intergenic |
| TAGTAGTGATGCCTTAGCAA+AGG | 0.620911 | 4.4:-70874374 | MS.gene060776:CDS |
| AGCGTTGTCGTGGTTGAAGG+TGG | 0.623840 | 4.4:-70873137 | MS.gene060776:CDS |
| AAGCAACTCAAGATCCCACC+AGG | 0.626516 | 4.4:-70873415 | MS.gene060776:CDS |
| GCAGGCGGTTCAATAGGCCG+AGG | 0.628346 | 4.4:+70873617 | None:intergenic |
| CATAGAACCGCCAAAACCAA+AGG | 0.629032 | 4.4:-70873474 | MS.gene060776:CDS |
| CGACAGGAGATGATTAGACA+TGG | 0.631416 | 4.4:-70873500 | MS.gene060776:CDS |
| CCAATAAATGTGTTCTGGTG+TGG | 0.635559 | 4.4:-70873016 | MS.gene060776:CDS |
| GATAGGTTGAGGTGGTGGAG+AGG | 0.641107 | 4.4:+70873586 | None:intergenic |
| TTTCTGAGGGACAGTAACGT+CGG | 0.642738 | 4.4:+70874207 | None:intergenic |
| GATTCCGGATATTGAGTGGT+GGG | 0.645660 | 4.4:-70873744 | MS.gene060776:CDS |
| ACCCGATTCCGGATATTGAG+TGG | 0.647460 | 4.4:-70873748 | MS.gene060776:CDS |
| AGCGGGCCTTGGGATGAGAG+AGG | 0.647591 | 4.4:+70873225 | None:intergenic |
| AGAAGAAACTAAAGACCCAA+AGG | 0.655642 | 4.4:-70873544 | MS.gene060776:CDS |
| GGACGTGAAATAGATGAACA+TGG | 0.655823 | 4.4:-70874148 | MS.gene060776:CDS |
| AAATGTGTTCTGGTGTGGCA+AGG | 0.657323 | 4.4:-70873011 | MS.gene060776:CDS |
| AGATAGAGAAGAATATAGCG+AGG | 0.664048 | 4.4:-70874485 | MS.gene060776:CDS |
| GAAGCGCGATGAAGAGAGGG+AGG | 0.664190 | 4.4:-70874536 | MS.gene060776:CDS |
| ACGAGAGAGACAAATCCGAT+AGG | 0.669354 | 4.4:-70874732 | MS.gene060776:CDS |
| AATCACAGAGAAGACCGAGA+AGG | 0.670001 | 4.4:-70874625 | MS.gene060776:CDS |
| CTGAAGCAAAGAAGGAACGT+AGG | 0.673233 | 4.4:-70874426 | MS.gene060776:CDS |
| CATTAACATAAACTCTAGAG+CGG | 0.690364 | 4.4:+70873207 | None:intergenic |
| AAATCGTTTGACTGGATGTG+CGG | 0.693768 | 4.4:-70873177 | MS.gene060776:CDS |
| TCGACAAAACAAAGCTCCTG+CGG | 0.696622 | 4.4:-70873979 | MS.gene060776:CDS |
| TCCGGTCAGATCGATGATGG+CGG | 0.696675 | 4.4:+70874647 | None:intergenic |
| TGTCCCTCAGAAACCAACCA+AGG | 0.741969 | 4.4:-70874197 | MS.gene060776:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATTGAAGAGTAAATT+TGG | - | chr4.4:70873709-70873728 | MS.gene060776:CDS | 15.0% |
| !! | TCTGTAATTTCTATTAAGTT+CGG | + | chr4.4:70873808-70873827 | None:intergenic | 20.0% |
| ! | CAAGATGAGTAATTTACATA+AGG | - | chr4.4:70874155-70874174 | MS.gene060776:CDS | 25.0% |
| ! | TGAAATACTAAAACCTGTAT+TGG | - | chr4.4:70873558-70873577 | MS.gene060776:CDS | 25.0% |
| AAATTACTCATCTTGACCTT+TGG | + | chr4.4:70874150-70874169 | None:intergenic | 30.0% | |
| AACAGAAAATTCATCCTCTT+AGG | + | chr4.4:70873652-70873671 | None:intergenic | 30.0% | |
| AGATGAAGGCAATATGAAAA+TGG | - | chr4.4:70873939-70873958 | MS.gene060776:CDS | 30.0% | |
| ATTAAGTTCGGATTGATATC+AGG | + | chr4.4:70873796-70873815 | None:intergenic | 30.0% | |
| GGATGATGATAAGAGAATTA+GGG | - | chr4.4:70873153-70873172 | MS.gene060776:CDS | 30.0% | |
| TCAAAATGAGGATTAGATTC+AGG | + | chr4.4:70873592-70873611 | None:intergenic | 30.0% | |
| TGGATGATGATAAGAGAATT+AGG | - | chr4.4:70873152-70873171 | MS.gene060776:CDS | 30.0% | |
| TGTAATGAAAGCAAAACTGA+AGG | - | chr4.4:70873834-70873853 | MS.gene060776:CDS | 30.0% | |
| TTATGCTTAGACGTATCAAA+TGG | - | chr4.4:70874520-70874539 | MS.gene060776:CDS | 30.0% | |
| TTCTCTATCTTTCCTCTTAT+GGG | + | chr4.4:70873110-70873129 | None:intergenic | 30.0% | |
| ! | AGTAATTTACATAAGGTGCT+AGG | - | chr4.4:70874162-70874181 | MS.gene060776:CDS | 30.0% |
| ! | CATTAACATAAACTCTAGAG+CGG | + | chr4.4:70874401-70874420 | None:intergenic | 30.0% |
| ! | GAATTTGAGTTATTCAACTG+AGG | + | chr4.4:70873310-70873329 | None:intergenic | 30.0% |
| ! | GTAATTTACATAAGGTGCTA+GGG | - | chr4.4:70874163-70874182 | MS.gene060776:CDS | 30.0% |
| !! | ATTAACATAAACTCTAGAGC+GGG | + | chr4.4:70874400-70874419 | None:intergenic | 30.0% |
| !! | CTTTTGCATTCTGGAAATTA+TGG | - | chr4.4:70873892-70873911 | MS.gene060776:CDS | 30.0% |
| AAGCAACCTTAGCACATTAA+AGG | - | chr4.4:70873504-70873523 | MS.gene060776:CDS | 35.0% | |
| ACAAGTGTGTCCAATGTATT+TGG | + | chr4.4:70874339-70874358 | None:intergenic | 35.0% | |
| AGAAGAAACTAAAGACCCAA+AGG | - | chr4.4:70874061-70874080 | MS.gene060776:CDS | 35.0% | |
| AGATAGAGAAGAATATAGCG+AGG | - | chr4.4:70873120-70873139 | MS.gene060776:CDS | 35.0% | |
| AGCAAGTCAATTAAGAGGTA+TGG | - | chr4.4:70874492-70874511 | MS.gene060776:CDS | 35.0% | |
| CAAGTGTGTCCAATGTATTT+GGG | + | chr4.4:70874338-70874357 | None:intergenic | 35.0% | |
| CATTTGTATAGTTGACAGCT+TGG | + | chr4.4:70874725-70874744 | None:intergenic | 35.0% | |
| CTTCTCTATCTTTCCTCTTA+TGG | + | chr4.4:70873111-70873130 | None:intergenic | 35.0% | |
| GGAAGAATTCAACTTTCATG+TGG | - | chr4.4:70873960-70873979 | MS.gene060776:CDS | 35.0% | |
| GTTTCATGACCCAAATACAT+TGG | - | chr4.4:70874326-70874345 | MS.gene060776:CDS | 35.0% | |
| TGTTGACCTTTAATGTGCTA+AGG | + | chr4.4:70873513-70873532 | None:intergenic | 35.0% | |
| TTTAATGTGCTAAGGTTGCT+TGG | + | chr4.4:70873505-70873524 | None:intergenic | 35.0% | |
| ! | AATTTTCTGTTTGTGGAGGA+AGG | - | chr4.4:70873661-70873680 | MS.gene060776:CDS | 35.0% |
| ! | GAGGATGAATTTTCTGTTTG+TGG | - | chr4.4:70873654-70873673 | MS.gene060776:CDS | 35.0% |
| ! | GATGAATTTTCTGTTTGTGG+AGG | - | chr4.4:70873657-70873676 | MS.gene060776:CDS | 35.0% |
| ! | GCAAGTCAATTAAGAGGTAT+GGG | - | chr4.4:70874493-70874512 | MS.gene060776:CDS | 35.0% |
| ! | GTAAAGTTTTTGTGGATGCT+GGG | - | chr4.4:70874682-70874701 | MS.gene060776:CDS | 35.0% |
| ! | TAAAGTTTTTGTGGATGCTG+GGG | - | chr4.4:70874683-70874702 | MS.gene060776:CDS | 35.0% |
| !! | AGGAGATTTGGTGATAAACT+TGG | - | chr4.4:70873199-70873218 | MS.gene060776:CDS | 35.0% |
| !! | CCTCATTTTGATGAGAGAAT+GGG | - | chr4.4:70873601-70873620 | MS.gene060776:CDS | 35.0% |
| !! | TCCTCATTTTGATGAGAGAA+TGG | - | chr4.4:70873600-70873619 | MS.gene060776:CDS | 35.0% |
| AAATCGTTTGACTGGATGTG+CGG | - | chr4.4:70874428-70874447 | MS.gene060776:CDS | 40.0% | |
| AAGAAGGAACGTAGGAGATT+TGG | - | chr4.4:70873187-70873206 | MS.gene060776:CDS | 40.0% | |
| ACACACTTGTCTCACTTTAC+AGG | - | chr4.4:70874349-70874368 | MS.gene060776:CDS | 40.0% | |
| ACCTATCAAGCCAACTAAAC+AGG | - | chr4.4:70874035-70874054 | MS.gene060776:CDS | 40.0% | |
| ACTTTCATGTGGAACATCCT+CGG | - | chr4.4:70873971-70873990 | MS.gene060776:CDS | 40.0% | |
| AGAAGAATATAGCGAGGATC+GGG | - | chr4.4:70873126-70873145 | MS.gene060776:CDS | 40.0% | |
| ATACGATGGAGATGAAAGAG+AGG | - | chr4.4:70873024-70873043 | MS.gene060776:CDS | 40.0% | |
| CACACTTGTCTCACTTTACA+GGG | - | chr4.4:70874350-70874369 | MS.gene060776:CDS | 40.0% | |
| CCAATAAATGTGTTCTGGTG+TGG | - | chr4.4:70874589-70874608 | MS.gene060776:CDS | 40.0% | |
| CCACACCAGAACACATTTAT+TGG | + | chr4.4:70874592-70874611 | None:intergenic | 40.0% | |
| CCCATTCTCTCATCAAAATG+AGG | + | chr4.4:70873604-70873623 | None:intergenic | 40.0% | |
| CGATGCCAATAAATGTGTTC+TGG | - | chr4.4:70874584-70874603 | MS.gene060776:CDS | 40.0% | |
| GAACCTATTGAAGCTCGATT+TGG | + | chr4.4:70874628-70874647 | None:intergenic | 40.0% | |
| GAATCTACAGCTATGTTTCC+TGG | - | chr4.4:70873361-70873380 | MS.gene060776:CDS | 40.0% | |
| GAGAAGAATATAGCGAGGAT+CGG | - | chr4.4:70873125-70873144 | MS.gene060776:CDS | 40.0% | |
| GAGGGATGTTTCAAAAGAGA+AGG | - | chr4.4:70874542-70874561 | MS.gene060776:CDS | 40.0% | |
| GCTCAACAAAATCGTTTGAC+TGG | - | chr4.4:70874420-70874439 | MS.gene060776:CDS | 40.0% | |
| GCTTAGACGTATCAAATGGA+GGG | - | chr4.4:70874524-70874543 | MS.gene060776:CDS | 40.0% | |
| GGACGTGAAATAGATGAACA+TGG | - | chr4.4:70873457-70873476 | MS.gene060776:CDS | 40.0% | |
| GTGGAAGCAAGTCAATTAAG+AGG | - | chr4.4:70874487-70874506 | MS.gene060776:CDS | 40.0% | |
| TACGATGGAGATGAAAGAGA+GGG | - | chr4.4:70873025-70873044 | MS.gene060776:CDS | 40.0% | |
| TAGTAGTGATGCCTTAGCAA+AGG | - | chr4.4:70873231-70873250 | MS.gene060776:CDS | 40.0% | |
| TCTATCTTTCCTCTTATGGG+AGG | + | chr4.4:70873107-70873126 | None:intergenic | 40.0% | |
| TGCTTAGACGTATCAAATGG+AGG | - | chr4.4:70874523-70874542 | MS.gene060776:CDS | 40.0% | |
| TGTTTGTGGAGGAAGGAAAA+TGG | - | chr4.4:70873668-70873687 | MS.gene060776:CDS | 40.0% | |
| TTCATCTATAGTACCGTTGG+CGG | + | chr4.4:70873926-70873945 | None:intergenic | 40.0% | |
| TTCATCTATTTCACGTCCCT+GGG | + | chr4.4:70873455-70873474 | None:intergenic | 40.0% | |
| TTCTTCTGCTCCTGTTTAGT+TGG | + | chr4.4:70874048-70874067 | None:intergenic | 40.0% | |
| TTGCCAAATCGAGCTTCAAT+AGG | - | chr4.4:70874622-70874641 | MS.gene060776:CDS | 40.0% | |
| ! | AGCTGCTCGTAAAGTTTTTG+TGG | - | chr4.4:70874674-70874693 | MS.gene060776:CDS | 40.0% |
| ! | CGTAAAGTTTTTGTGGATGC+TGG | - | chr4.4:70874681-70874700 | MS.gene060776:CDS | 40.0% |
| ! | TCAGAAGAAAGCACACAGTT+GGG | - | chr4.4:70873328-70873347 | MS.gene060776:CDS | 40.0% |
| ! | TTCAGAAGAAAGCACACAGT+TGG | - | chr4.4:70873327-70873346 | MS.gene060776:CDS | 40.0% |
| !! | CTCATCTTGACCTTTGGTTT+TGG | + | chr4.4:70874144-70874163 | None:intergenic | 40.0% |
| !! | TAGGGTTTCTGAAGCAAAGA+AGG | - | chr4.4:70873171-70873190 | MS.gene060776:CDS | 40.0% |
| !! | TCCTGTTTAGTTGGCTTGAT+AGG | + | chr4.4:70874039-70874058 | None:intergenic | 40.0% |
| !! | TTAGTTGGCTTGATAGGTTG+AGG | + | chr4.4:70874033-70874052 | None:intergenic | 40.0% |
| !!! | ATCTTGACCTTTGGTTTTGG+CGG | + | chr4.4:70874141-70874160 | None:intergenic | 40.0% |
| AAAACTGAAGGACCCGATTC+CGG | - | chr4.4:70873846-70873865 | MS.gene060776:CDS | 45.0% | |
| AAAGAGAGGGTAGCAAAGGT+AGG | - | chr4.4:70873038-70873057 | MS.gene060776:CDS | 45.0% | |
| AAATGACCTCTCTCATCCCA+AGG | - | chr4.4:70874374-70874393 | MS.gene060776:CDS | 45.0% | |
| AAATGTGTTCTGGTGTGGCA+AGG | - | chr4.4:70874594-70874613 | MS.gene060776:CDS | 45.0% | |
| AATCACAGAGAAGACCGAGA+AGG | - | chr4.4:70872980-70872999 | MS.gene060776:CDS | 45.0% | |
| ACAGCTTGGTCCCAATAATG+AGG | + | chr4.4:70874711-70874730 | None:intergenic | 45.0% | |
| ACCACTCAATATCCGGAATC+GGG | + | chr4.4:70873861-70873880 | None:intergenic | 45.0% | |
| ACGAGAGAGACAAATCCGAT+AGG | - | chr4.4:70872873-70872892 | MS.gene060776:CDS | 45.0% | |
| AGCTCAAGCAAAAGAGCAGA+AGG | - | chr4.4:70873735-70873754 | MS.gene060776:CDS | 45.0% | |
| ATATAGCGAGGATCGGGAAT+TGG | - | chr4.4:70873132-70873151 | MS.gene060776:CDS | 45.0% | |
| ATGCTGGGGTTCCTCATTAT+TGG | - | chr4.4:70874697-70874716 | MS.gene060776:CDS | 45.0% | |
| CAAACAAGCACAGCTAGCAA+AGG | - | chr4.4:70873759-70873778 | MS.gene060776:CDS | 45.0% | |
| CACCACTCAATATCCGGAAT+CGG | + | chr4.4:70873862-70873881 | None:intergenic | 45.0% | |
| CATAGAACCGCCAAAACCAA+AGG | - | chr4.4:70874131-70874150 | MS.gene060776:CDS | 45.0% | |
| CGACAGGAGATGATTAGACA+TGG | - | chr4.4:70874105-70874124 | MS.gene060776:CDS | 45.0% | |
| CTGAAGCAAAGAAGGAACGT+AGG | - | chr4.4:70873179-70873198 | MS.gene060776:CDS | 45.0% | |
| CTTTGCTAGCTGTGCTTGTT+TGG | + | chr4.4:70873761-70873780 | None:intergenic | 45.0% | |
| GATGAAAGAGAGGGTAGCAA+AGG | - | chr4.4:70873034-70873053 | MS.gene060776:CDS | 45.0% | |
| GATTCCGGATATTGAGTGGT+GGG | - | chr4.4:70873861-70873880 | MS.gene060776:CDS | 45.0% | |
| GCCAACGGTACTATAGATGA+AGG | - | chr4.4:70873925-70873944 | MS.gene060776:CDS | 45.0% | |
| GCCTTCATCTATAGTACCGT+TGG | + | chr4.4:70873929-70873948 | None:intergenic | 45.0% | |
| GTTCATCTATTTCACGTCCC+TGG | + | chr4.4:70873456-70873475 | None:intergenic | 45.0% | |
| TCAGGATCGACATCCAATAC+AGG | + | chr4.4:70873574-70873593 | None:intergenic | 45.0% | |
| TCGACAAAACAAAGCTCCTG+CGG | - | chr4.4:70873626-70873645 | MS.gene060776:CDS | 45.0% | |
| TGCCTTAGCAAAGGCTAAGA+AGG | - | chr4.4:70873240-70873259 | MS.gene060776:CDS | 45.0% | |
| TGCTGGGGTTCCTCATTATT+GGG | - | chr4.4:70874698-70874717 | MS.gene060776:CDS | 45.0% | |
| ! | AGCCTTCTTAGCCTTTGCTA+AGG | + | chr4.4:70873245-70873264 | None:intergenic | 45.0% |
| ! | CTAAGGCATCACTACTAGAG+AGG | + | chr4.4:70873228-70873247 | None:intergenic | 45.0% |
| ! | TTTCTGAGGGACAGTAACGT+CGG | + | chr4.4:70873401-70873420 | None:intergenic | 45.0% |
| !! | ACGTACTTCCTTTTCAAGCC+TGG | + | chr4.4:70874211-70874230 | None:intergenic | 45.0% |
| !! | ACTTCCTTTTCAAGCCTGGT+GGG | + | chr4.4:70874207-70874226 | None:intergenic | 45.0% |
| !! | TACTTCCTTTTCAAGCCTGG+TGG | + | chr4.4:70874208-70874227 | None:intergenic | 45.0% |
| AAGACGAAGAACAGGAGCCT+TGG | + | chr4.4:70873428-70873447 | None:intergenic | 50.0% | |
| AAGCAACTCAAGATCCCACC+AGG | - | chr4.4:70874190-70874209 | MS.gene060776:CDS | 50.0% | |
| AATCGAAGCGCGATGAAGAG+AGG | - | chr4.4:70873065-70873084 | MS.gene060776:CDS | 50.0% | |
| AATTCATCCTCTTAGGCCGC+AGG | + | chr4.4:70873645-70873664 | None:intergenic | 50.0% | |
| ACCCGATTCCGGATATTGAG+TGG | - | chr4.4:70873857-70873876 | MS.gene060776:CDS | 50.0% | |
| ACGTCCCACCACTCAATATC+CGG | + | chr4.4:70873868-70873887 | None:intergenic | 50.0% | |
| AGATCCCACCAGGCTTGAAA+AGG | - | chr4.4:70874200-70874219 | MS.gene060776:CDS | 50.0% | |
| AGCGAAGGTGAAAAAGCGAC+AGG | - | chr4.4:70874089-70874108 | MS.gene060776:CDS | 50.0% | |
| AGCTGCGTGAGAAGAAGGAA+AGG | - | chr4.4:70874298-70874317 | MS.gene060776:CDS | 50.0% | |
| AGGAAGCAGAGACAGGGATA+TGG | - | chr4.4:70873000-70873019 | MS.gene060776:CDS | 50.0% | |
| ATCGAAGCGCGATGAAGAGA+GGG | - | chr4.4:70873066-70873085 | MS.gene060776:CDS | 50.0% | |
| CACCTTCGCTATACGCCTTT+GGG | + | chr4.4:70874079-70874098 | None:intergenic | 50.0% | |
| CGATTCCGGATATTGAGTGG+TGG | - | chr4.4:70873860-70873879 | MS.gene060776:CDS | 50.0% | |
| CTCGATACTCCTCCCATAAG+AGG | - | chr4.4:70873095-70873114 | MS.gene060776:CDS | 50.0% | |
| CTCGGTCTTCTCTGTGATTC+CGG | + | chr4.4:70872979-70872998 | None:intergenic | 50.0% | |
| GACAGGGATATGGGATACGA+TGG | - | chr4.4:70873010-70873029 | MS.gene060776:CDS | 50.0% | |
| GATTCCGGTCAGATCGATGA+TGG | + | chr4.4:70872964-70872983 | None:intergenic | 50.0% | |
| GGAAGCAGAGACAGGGATAT+GGG | - | chr4.4:70873001-70873020 | MS.gene060776:CDS | 50.0% | |
| GTGAGCAGGCTCACATAGAT+AGG | - | chr4.4:70874247-70874266 | MS.gene060776:CDS | 50.0% | |
| GTTAGCGTTGTCGTGGTTGA+AGG | - | chr4.4:70874465-70874484 | MS.gene060776:CDS | 50.0% | |
| TAACGTCGGGTGTAGCAATC+TGG | + | chr4.4:70873387-70873406 | None:intergenic | 50.0% | |
| TATGGTGACATTGCCGCCAA+CGG | - | chr4.4:70873910-70873929 | MS.gene060776:CDS | 50.0% | |
| TCACCTTCGCTATACGCCTT+TGG | + | chr4.4:70874080-70874099 | None:intergenic | 50.0% | |
| TGTCCCTCAGAAACCAACCA+AGG | - | chr4.4:70873408-70873427 | MS.gene060776:CDS | 50.0% | |
| ! | GACGTGGCACTTTTGCATTC+TGG | - | chr4.4:70873883-70873902 | MS.gene060776:CDS | 50.0% |
| ! | GGATGTGCGGTGATTTGTGA+TGG | - | chr4.4:70874441-70874460 | MS.gene060776:CDS | 50.0% |
| ! | TGATGGTGTTAGCGTTGTCG+TGG | - | chr4.4:70874458-70874477 | MS.gene060776:CDS | 50.0% |
| ! | TTCTGAGGGACAGTAACGTC+GGG | + | chr4.4:70873400-70873419 | None:intergenic | 50.0% |
| !! | ATAAACTCTAGAGCGGGCCT+TGG | + | chr4.4:70874394-70874413 | None:intergenic | 50.0% |
| !! | ATGTTCGGAGTGTCGCCTAT+CGG | + | chr4.4:70872891-70872910 | None:intergenic | 50.0% |
| !! | GAGCCTTGGTTGGTTTCTGA+GGG | + | chr4.4:70873414-70873433 | None:intergenic | 50.0% |
| !! | GTTGGCTTGATAGGTTGAGG+TGG | + | chr4.4:70874030-70874049 | None:intergenic | 50.0% |
| !! | TAAACTCTAGAGCGGGCCTT+GGG | + | chr4.4:70874393-70874412 | None:intergenic | 50.0% |
| ACCGAGAAGGAAGCAGAGAC+AGG | - | chr4.4:70872993-70873012 | MS.gene060776:CDS | 55.0% | |
| ACCGCCATCATCGATCTGAC+CGG | - | chr4.4:70872957-70872976 | MS.gene060776:CDS | 55.0% | |
| ACCGTAACCATCACCGGAAC+CGG | - | chr4.4:70872918-70872937 | MS.gene060776:CDS | 55.0% | |
| AGCGTTGTCGTGGTTGAAGG+TGG | - | chr4.4:70874468-70874487 | MS.gene060776:CDS | 55.0% | |
| CCCTGTCTCTGCTTCCTTCT+CGG | + | chr4.4:70872997-70873016 | None:intergenic | 55.0% | |
| CCGAGAAGGAAGCAGAGACA+GGG | - | chr4.4:70872994-70873013 | MS.gene060776:CDS | 55.0% | |
| CGAAGAACAGGAGCCTTGGT+TGG | + | chr4.4:70873424-70873443 | None:intergenic | 55.0% | |
| GGTGGTCATCAGAATCGTGC+CGG | + | chr4.4:70872940-70872959 | None:intergenic | 55.0% | |
| GTTACGGTCGCGGTCATGTT+CGG | + | chr4.4:70872906-70872925 | None:intergenic | 55.0% | |
| GTTCTTCGTCTTGACGCCCA+GGG | - | chr4.4:70873436-70873455 | MS.gene060776:CDS | 55.0% | |
| TGCTGAGCTGCGTGAGAAGA+AGG | - | chr4.4:70874293-70874312 | MS.gene060776:CDS | 55.0% | |
| TGGGCGTCAAGACGAAGAAC+AGG | + | chr4.4:70873436-70873455 | None:intergenic | 55.0% | |
| TGTTCTTCGTCTTGACGCCC+AGG | - | chr4.4:70873435-70873454 | MS.gene060776:CDS | 55.0% | |
| TTCTTCTCACGCAGCTCAGC+AGG | + | chr4.4:70874294-70874313 | None:intergenic | 55.0% | |
| ! | GACCCAAAGGCGTATAGCGA+AGG | - | chr4.4:70874074-70874093 | MS.gene060776:CDS | 55.0% |
| ! | GGATATTGAGTGGTGGGACG+TGG | - | chr4.4:70873867-70873886 | MS.gene060776:CDS | 55.0% |
| ! | GGCTTGATAGGTTGAGGTGG+TGG | + | chr4.4:70874027-70874046 | None:intergenic | 55.0% |
| ! | TCCGGTCAGATCGATGATGG+CGG | + | chr4.4:70872961-70872980 | None:intergenic | 55.0% |
| !! | CATCAGAATCGTGCCGGTTC+CGG | + | chr4.4:70872934-70872953 | None:intergenic | 55.0% |
| !! | GATAGGTTGAGGTGGTGGAG+AGG | + | chr4.4:70874022-70874041 | None:intergenic | 55.0% |
| !! | GGAGCCTTGGTTGGTTTCTG+AGG | + | chr4.4:70873415-70873434 | None:intergenic | 55.0% |
| ACCGCGACCGTAACCATCAC+CGG | - | chr4.4:70872912-70872931 | MS.gene060776:CDS | 60.0% | |
| CAAAGCTCCTGCGGCCTAAG+AGG | - | chr4.4:70873635-70873654 | MS.gene060776:CDS | 60.0% | |
| GAAGCGCGATGAAGAGAGGG+AGG | - | chr4.4:70873069-70873088 | MS.gene060776:CDS | 60.0% | |
| GGCTCAGCAGGCGGTTCAAT+AGG | + | chr4.4:70873997-70874016 | None:intergenic | 60.0% | |
| TCGGGTGTAGCAATCTGGCC+AGG | + | chr4.4:70873382-70873401 | None:intergenic | 60.0% | |
| ! | GCCGGTTCCGGTGATGGTTA+CGG | + | chr4.4:70872922-70872941 | None:intergenic | 60.0% |
| ! | TCCGGTGATGGTTACGGTCG+CGG | + | chr4.4:70872916-70872935 | None:intergenic | 60.0% |
| !! | AATCGTGCCGGTTCCGGTGA+TGG | + | chr4.4:70872928-70872947 | None:intergenic | 60.0% |
| !! | AGGTTGAGGTGGTGGAGAGG+CGG | + | chr4.4:70874019-70874038 | None:intergenic | 60.0% |
| !! | GGTCAGATCGATGATGGCGG+TGG | + | chr4.4:70872958-70872977 | None:intergenic | 60.0% |
| AGCGGGCCTTGGGATGAGAG+AGG | + | chr4.4:70874383-70874402 | None:intergenic | 65.0% | |
| GCAGGCGGTTCAATAGGCCG+AGG | + | chr4.4:70873991-70874010 | None:intergenic | 65.0% | |
| TGCAGCTGCTGAGCGTGAGC+AGG | - | chr4.4:70874233-70874252 | MS.gene060776:CDS | 65.0% | |
| !! | GGTTGAGGTGGTGGAGAGGC+GGG | + | chr4.4:70874018-70874037 | None:intergenic | 65.0% |
| ! | GGAGAGGCGGGCTCAGCAGG+CGG | + | chr4.4:70874006-70874025 | None:intergenic | 75.0% |
| ! | GGTGGAGAGGCGGGCTCAGC+AGG | + | chr4.4:70874009-70874028 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 70872869 | 70874758 | 70872869 | ID=MS.gene060776 |
| chr4.4 | mRNA | 70872869 | 70874758 | 70872869 | ID=MS.gene060776.t1;Parent=MS.gene060776 |
| chr4.4 | exon | 70872869 | 70874758 | 70872869 | ID=MS.gene060776.t1.exon1;Parent=MS.gene060776.t1 |
| chr4.4 | CDS | 70872869 | 70874758 | 70872869 | ID=cds.MS.gene060776.t1;Parent=MS.gene060776.t1 |
| Gene Sequence |
| Protein sequence |
