Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060774.t1 | AES63022.2 | 77 | 595 | 41 | 5 | 117 | 616 | 241 | 834 | 1.60E-222 | 782.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060774.t1 | Q9C7E7 | 68.0 | 456 | 137 | 5 | 163 | 613 | 335 | 786 | 2.1e-154 | 547.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060774.t1 | G7IF06 | 77.0 | 595 | 41 | 5 | 117 | 616 | 241 | 834 | 1.2e-222 | 782.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060774 | MS.gene060776 | 0.910363 | 2.04E-82 | -1.69E-46 |
| MS.gene060774 | MS.gene48652 | 0.859551 | 3.82E-63 | -1.69E-46 |
| MS.gene060774 | MS.gene83322 | 0.862286 | 5.64E-64 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060774.t1 | MTR_1g115920 | 92.140 | 458 | 31 | 3 | 163 | 616 | 378 | 834 | 0.0 | 778 |
| MS.gene060774.t1 | MTR_1g115920 | 83.871 | 124 | 11 | 4 | 1 | 118 | 26 | 146 | 1.78e-49 | 184 |
| MS.gene060774.t1 | MTR_1g115920 | 78.947 | 57 | 9 | 1 | 117 | 170 | 241 | 297 | 2.60e-11 | 67.4 |
| MS.gene060774.t1 | MTR_4g094355 | 83.704 | 270 | 20 | 4 | 75 | 344 | 6 | 251 | 1.93e-139 | 413 |
| MS.gene060774.t1 | MTR_4g094355 | 92.147 | 191 | 14 | 1 | 427 | 616 | 250 | 440 | 9.58e-119 | 360 |
| MS.gene060774.t1 | MTR_5g039050 | 83.408 | 223 | 27 | 4 | 307 | 528 | 67 | 280 | 1.83e-108 | 333 |
| MS.gene060774.t1 | MTR_5g039050 | 82.222 | 45 | 7 | 1 | 169 | 212 | 6 | 50 | 1.53e-14 | 76.6 |
| MS.gene060774.t1 | MTR_5g039100 | 69.159 | 107 | 21 | 4 | 15 | 118 | 7 | 104 | 1.06e-29 | 116 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060774.t1 | AT1G28060 | 66.374 | 455 | 146 | 4 | 163 | 613 | 335 | 786 | 0.0 | 594 |
| MS.gene060774.t1 | AT1G28060 | 66.374 | 455 | 146 | 4 | 163 | 613 | 335 | 786 | 0.0 | 594 |
| MS.gene060774.t1 | AT1G28060 | 66.374 | 455 | 146 | 4 | 163 | 613 | 335 | 786 | 0.0 | 594 |
| MS.gene060774.t1 | AT3G55930 | 61.481 | 270 | 99 | 4 | 344 | 610 | 3 | 270 | 2.47e-95 | 293 |
Find 161 sgRNAs with CRISPR-Local
Find 175 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACACCAGAACACATTTAT+TGG | 0.127318 | 4.4:+70954023 | None:intergenic |
| ACAAGTTTGTCCAATGTATT+TGG | 0.138799 | 4.4:+70954273 | None:intergenic |
| ATAAAATTGAAGAGTAAATT+TGG | 0.190886 | 4.4:-70954900 | MS.gene060774:CDS |
| ACTGGATGTGCGGTGATTTA+TGG | 0.229620 | 4.4:-70954171 | MS.gene060774:CDS |
| TGCTGGGGTTCCTCATTATT+GGG | 0.233213 | 4.4:-70953914 | MS.gene060774:CDS |
| AATTGGATGATAAGAGAATT+AGG | 0.237950 | 4.4:-70955424 | MS.gene060774:CDS |
| ATGCTGGGGTTCCTCATTAT+TGG | 0.242299 | 4.4:-70953915 | MS.gene060774:CDS |
| ACAAACTTGTCTCACTTTAC+AGG | 0.244618 | 4.4:-70954260 | MS.gene060774:CDS |
| CTTCTGCATTCTGGAAATTA+TGG | 0.253483 | 4.4:-70954717 | MS.gene060774:CDS |
| CCCTGTCTCTGCTTCCTTCT+CGG | 0.262332 | 4.4:+70955579 | None:intergenic |
| CTCATCTTGACCTTTGGTTT+TGG | 0.279974 | 4.4:+70954468 | None:intergenic |
| CTTTGCTACCTGTGCTTGTT+TGG | 0.286036 | 4.4:+70954851 | None:intergenic |
| AGGAAGCAGAGACAGGGATA+TGG | 0.287407 | 4.4:-70955573 | MS.gene060774:CDS |
| CTCGGTCTTCTCTGTGATTC+CGG | 0.301582 | 4.4:+70955597 | None:intergenic |
| TCCTGTTTAGTTGGCTTGAT+AGG | 0.304342 | 4.4:+70954573 | None:intergenic |
| TCACCTTAGCTATACGCCTT+TGG | 0.310566 | 4.4:+70954532 | None:intergenic |
| ATTAAGTTCGGATTGATATC+AGG | 0.315138 | 4.4:+70954816 | None:intergenic |
| CACCTTAGCTATACGCCTTT+GGG | 0.317473 | 4.4:+70954533 | None:intergenic |
| AAGCAACCTTAGCACATTAA+AGG | 0.318390 | 4.4:-70955105 | MS.gene060774:CDS |
| TTCTTCTGCTCCTGTTTAGT+TGG | 0.318787 | 4.4:+70954564 | None:intergenic |
| CATCAGAATCGTGCCGGTTC+CGG | 0.331455 | 4.4:+70955642 | None:intergenic |
| GACGTGGCACTTCTGCATTC+TGG | 0.335270 | 4.4:-70954726 | MS.gene060774:CDS |
| GTTCATCTATTTCACGTCCC+TGG | 0.343803 | 4.4:+70955156 | None:intergenic |
| GGTGGAGAGGCGGGCTCAGC+AGG | 0.346160 | 4.4:+70954603 | None:intergenic |
| ATGATAAGAGAATTAGGGTT+AGG | 0.350518 | 4.4:-70955418 | MS.gene060774:CDS |
| TGAAATACTAAAACCTGTAT+TGG | 0.355353 | 4.4:-70955051 | MS.gene060774:CDS |
| GAACCTATTGAAGCTCGATT+TGG | 0.361063 | 4.4:+70953987 | None:intergenic |
| AGATGAAGGCAATATGAAAA+TGG | 0.363556 | 4.4:-70954670 | MS.gene060774:CDS |
| TGCAGCTGCTGAGCGTGAGC+AGG | 0.369144 | 4.4:-70954376 | MS.gene060774:CDS |
| AAGAAGGAACGTAGGAGATT+TGG | 0.374683 | 4.4:-70955383 | MS.gene060774:CDS |
| AAATTACTCATCTTGACCTT+TGG | 0.381357 | 4.4:+70954462 | None:intergenic |
| ACCGTAACCATCACCGGAAC+CGG | 0.388029 | 4.4:-70955655 | MS.gene060774:CDS |
| ATTGGATGATAAGAGAATTA+GGG | 0.389557 | 4.4:-70955423 | MS.gene060774:CDS |
| TGTTTGTGGAGGAAGGAAAA+TGG | 0.392737 | 4.4:-70954941 | MS.gene060774:CDS |
| TCTGTAATTTCTATTAAGTT+CGG | 0.393587 | 4.4:+70954804 | None:intergenic |
| AGCAAGTCAATTAAGAGGTA+TGG | 0.404160 | 4.4:-70954120 | MS.gene060774:CDS |
| CAAGTTTGTCCAATGTATTT+GGG | 0.405319 | 4.4:+70954274 | None:intergenic |
| TTCTTCTCACGCAGCTCAGC+AGG | 0.405655 | 4.4:+70954318 | None:intergenic |
| TTGCCAAATCGAGCTTCAAT+AGG | 0.406342 | 4.4:-70953990 | MS.gene060774:CDS |
| TCAAAATGAGGATTAGATTC+AGG | 0.407433 | 4.4:+70955020 | None:intergenic |
| ACCTATCAAGCCAACTAAAC+AGG | 0.413749 | 4.4:-70954574 | MS.gene060774:CDS |
| TTCATCTATTTCACGTCCCT+GGG | 0.414957 | 4.4:+70955157 | None:intergenic |
| ATAAACTCTAGAGCGGGCCT+TGG | 0.420863 | 4.4:+70954218 | None:intergenic |
| CTCGATACTCCTCGCATAAG+AGG | 0.421449 | 4.4:-70955478 | MS.gene060774:CDS |
| ATATAGCGATGATCGGGAAT+TGG | 0.423849 | 4.4:-70955441 | MS.gene060774:CDS |
| ACCGAGAAGGAAGCAGAGAC+AGG | 0.430015 | 4.4:-70955580 | MS.gene060774:CDS |
| TTTAATGTGCTAAGGTTGCT+TGG | 0.430099 | 4.4:+70955107 | None:intergenic |
| CACCACTCAATATCCGGAAT+CGG | 0.431295 | 4.4:+70954750 | None:intergenic |
| GGAAGCAGAGACAGGGATAT+GGG | 0.431480 | 4.4:-70955572 | MS.gene060774:CDS |
| GGCTCAGCAGGCGGTTCAAT+AGG | 0.433119 | 4.4:+70954615 | None:intergenic |
| CAAAGCTCCTGCGGCCTAAG+AGG | 0.436122 | 4.4:-70954974 | MS.gene060774:CDS |
| TGTTCTTCGTCTTGACGCCC+AGG | 0.441585 | 4.4:-70955174 | MS.gene060774:CDS |
| CGATGCCAATAAATGTGTTC+TGG | 0.441704 | 4.4:-70954028 | MS.gene060774:CDS |
| AACAGAAAATTCATCCTCTT+AGG | 0.449563 | 4.4:+70954960 | None:intergenic |
| AAAACTGAAGGACCCGATTC+CGG | 0.455391 | 4.4:-70954763 | MS.gene060774:CDS |
| TGATAAGAGAATTAGGGTTA+GGG | 0.455771 | 4.4:-70955417 | MS.gene060774:CDS |
| ACGTCCCACCACTCAATATC+CGG | 0.458176 | 4.4:+70954744 | None:intergenic |
| GCCGGTTCCGGTGATGGTTA+CGG | 0.466812 | 4.4:+70955654 | None:intergenic |
| TGCTGAGCTGCGTGAGAAGA+AGG | 0.474449 | 4.4:-70954316 | MS.gene060774:CDS |
| CATTTGTATAGTTGACAGCT+TGG | 0.476752 | 4.4:+70953890 | None:intergenic |
| GGTTGAGGTGGTGGAGAGGC+GGG | 0.476862 | 4.4:+70954594 | None:intergenic |
| GTTAGCGTTGTCGTGGTTGA+AGG | 0.477825 | 4.4:-70954147 | MS.gene060774:CDS |
| AATCGTGCCGGTTCCGGTGA+TGG | 0.479993 | 4.4:+70955648 | None:intergenic |
| AGGAGATTTGGTGATAAACT+TGG | 0.481118 | 4.4:-70955371 | MS.gene060774:CDS |
| GTGAGCAGGCTCACATAGAT+AGG | 0.485650 | 4.4:-70954362 | MS.gene060774:CDS |
| GCTCAACAAAATCGTTTGAC+TGG | 0.491510 | 4.4:-70954189 | MS.gene060774:CDS |
| TAGGGTTTCTGAAGCAAAGA+AGG | 0.491982 | 4.4:-70955399 | MS.gene060774:CDS |
| TTCAGAAGAAAGCACACAGT+TGG | 0.492012 | 4.4:-70955243 | MS.gene060774:CDS |
| GCAGAAGGCCAAACAAGCAC+AGG | 0.492548 | 4.4:-70954859 | MS.gene060774:CDS |
| AGAAGAATATAGCGATGATC+GGG | 0.497936 | 4.4:-70955447 | MS.gene060774:CDS |
| AGTAATTTACATAAGGTGCT+AGG | 0.498879 | 4.4:-70954447 | MS.gene060774:CDS |
| TGGGCGTCAAGACGAAGAAC+AGG | 0.500740 | 4.4:+70955176 | None:intergenic |
| AGATCCCACCAGGCTTGAAA+AGG | 0.500964 | 4.4:-70954409 | MS.gene060774:CDS |
| TCAGGATCGACATCCAATAC+AGG | 0.501479 | 4.4:+70955038 | None:intergenic |
| CAAACTTGTCTCACTTTACA+GGG | 0.502069 | 4.4:-70954259 | MS.gene060774:CDS |
| CAAGATGAGTAATTTACATA+AGG | 0.502552 | 4.4:-70954454 | MS.gene060774:CDS |
| AGGTTGAGGTGGTGGAGAGG+CGG | 0.504638 | 4.4:+70954593 | None:intergenic |
| GCCTTCATCTATAGTACCGT+TGG | 0.504964 | 4.4:+70954683 | None:intergenic |
| ATGTTCGGAGTGTCGCCTAT+CGG | 0.505740 | 4.4:+70955685 | None:intergenic |
| GGAGCCTTGGTTGGTTTCTG+AGG | 0.506975 | 4.4:+70955197 | None:intergenic |
| TGCCTTAGCAAAGGCTAAGA+AGG | 0.507867 | 4.4:-70955330 | MS.gene060774:CDS |
| ACCACTCAATATCCGGAATC+GGG | 0.511345 | 4.4:+70954751 | None:intergenic |
| GCAAGTCAATTAAGAGGTAT+GGG | 0.512247 | 4.4:-70954119 | MS.gene060774:CDS |
| TCAGAAGAAAGCACACAGTT+GGG | 0.515196 | 4.4:-70955242 | MS.gene060774:CDS |
| TAAACTCTAGAGCGGGCCTT+GGG | 0.515382 | 4.4:+70954219 | None:intergenic |
| CGAAGAACAGGAGCCTTGGT+TGG | 0.517067 | 4.4:+70955188 | None:intergenic |
| TTATGCTTAGACGTATCAAA+TGG | 0.519358 | 4.4:-70954092 | MS.gene060774:CDS |
| GTGGAAGCAAGTCAATTAAG+AGG | 0.522404 | 4.4:-70954125 | MS.gene060774:CDS |
| GTTACGGTCACAGTCATGTT+CGG | 0.523251 | 4.4:+70955670 | None:intergenic |
| GGCTTGATAGGTTGAGGTGG+TGG | 0.526396 | 4.4:+70954585 | None:intergenic |
| ATCGAAGCGCGATGAAGAGA+GGG | 0.529353 | 4.4:-70955507 | MS.gene060774:CDS |
| GTTTGATGACCCAAATACAT+TGG | 0.529532 | 4.4:-70954283 | MS.gene060774:CDS |
| ACTTTCATGTGGAACATCCT+CGG | 0.530971 | 4.4:-70954638 | MS.gene060774:CDS |
| GAGCCTTGGTTGGTTTCTGA+GGG | 0.533893 | 4.4:+70955198 | None:intergenic |
| GACCCAAAGGCGTATAGCTA+AGG | 0.534462 | 4.4:-70954535 | MS.gene060774:CDS |
| AGCTCAAGCAAAAGAGCAGA+AGG | 0.535132 | 4.4:-70954874 | MS.gene060774:CDS |
| GGATATTGAGTGGTGGGACG+TGG | 0.536150 | 4.4:-70954742 | MS.gene060774:CDS |
| GAGAAGAATATAGCGATGAT+CGG | 0.536885 | 4.4:-70955448 | MS.gene060774:CDS |
| CCCATTCTCTCATCAAAATG+AGG | 0.549338 | 4.4:+70955008 | None:intergenic |
| ACTGTGACCGTAACCATCAC+CGG | 0.550802 | 4.4:-70955661 | MS.gene060774:CDS |
| TTCTGAGGGACAGTAACGTC+GGG | 0.556866 | 4.4:+70955212 | None:intergenic |
| AAGACGAAGAACAGGAGCCT+TGG | 0.557281 | 4.4:+70955184 | None:intergenic |
| TTCATCTATAGTACCGTTGG+CGG | 0.558630 | 4.4:+70954686 | None:intergenic |
| CAAACAAGCACAGGTAGCAA+AGG | 0.558743 | 4.4:-70954850 | MS.gene060774:CDS |
| AATCGAAGCGCGATGAAGAG+AGG | 0.561052 | 4.4:-70955508 | MS.gene060774:CDS |
| GACGAAAGAGAGGGTAGCAA+AGG | 0.561832 | 4.4:-70955539 | MS.gene060774:CDS |
| GGAGAGGCGGGCTCAGCAGG+CGG | 0.561936 | 4.4:+70954606 | None:intergenic |
| TGTTGACCTTTAATGTGCTA+AGG | 0.561959 | 4.4:+70955099 | None:intergenic |
| GTTCTTCGTCTTGACGCCCA+GGG | 0.562372 | 4.4:-70955173 | MS.gene060774:CDS |
| AATTCATCCTCTTAGGCCGC+AGG | 0.563858 | 4.4:+70954967 | None:intergenic |
| GTAATTTACATAAGGTGCTA+GGG | 0.564338 | 4.4:-70954446 | MS.gene060774:CDS |
| TTAGTTGGCTTGATAGGTTG+AGG | 0.576255 | 4.4:+70954579 | None:intergenic |
| GGAAGAATTCAACTTTCATG+TGG | 0.576369 | 4.4:-70954649 | MS.gene060774:CDS |
| AGCCTTCTTAGCCTTTGCTA+AGG | 0.581971 | 4.4:+70955328 | None:intergenic |
| GGTCAGATCGATGATGGCGG+TGG | 0.582301 | 4.4:+70955618 | None:intergenic |
| CCGAGAAGGAAGCAGAGACA+GGG | 0.584656 | 4.4:-70955579 | MS.gene060774:CDS |
| GTTGGCTTGATAGGTTGAGG+TGG | 0.586185 | 4.4:+70954582 | None:intergenic |
| GCCAACGGTACTATAGATGA+AGG | 0.586217 | 4.4:-70954684 | MS.gene060774:CDS |
| CTAAGGCATCACTACTAGAG+AGG | 0.588190 | 4.4:+70955345 | None:intergenic |
| GATTCCGGTCAGATCGATGA+TGG | 0.589596 | 4.4:+70955612 | None:intergenic |
| ATTAACATAAACTCTAGAGC+GGG | 0.591581 | 4.4:+70954212 | None:intergenic |
| TGCTTAGACGTATCAAATGG+AGG | 0.592616 | 4.4:-70954089 | MS.gene060774:CDS |
| AAAGAGAGGGTAGCAAAGGT+AGG | 0.594676 | 4.4:-70955535 | MS.gene060774:CDS |
| TATGGTGACATTGCCGCCAA+CGG | 0.595136 | 4.4:-70954699 | MS.gene060774:CDS |
| TCTATCTTTCCTCTTATGCG+AGG | 0.606208 | 4.4:+70955469 | None:intergenic |
| GACAGGGATATGGGATACGA+TGG | 0.607091 | 4.4:-70955563 | MS.gene060774:CDS |
| GGTGGTCATCAGAATCGTGC+CGG | 0.608684 | 4.4:+70955636 | None:intergenic |
| ACCGCCATCATCGATCTGAC+CGG | 0.610844 | 4.4:-70955616 | MS.gene060774:CDS |
| GCTTAGACGTATCAAATGGA+GGG | 0.611542 | 4.4:-70954088 | MS.gene060774:CDS |
| CGATTCCGGATATTGAGTGG+TGG | 0.614030 | 4.4:-70954749 | MS.gene060774:CDS |
| AAATGACCTCTCTCATCCCA+AGG | 0.616566 | 4.4:-70954235 | MS.gene060774:CDS |
| TGTAATGAAAGCAAAACTGA+AGG | 0.617069 | 4.4:-70954775 | MS.gene060774:CDS |
| ACAGCTTGGTCCCAATAATG+AGG | 0.617442 | 4.4:+70953904 | None:intergenic |
| TTATGGTGTTAGCGTTGTCG+TGG | 0.619647 | 4.4:-70954154 | MS.gene060774:CDS |
| GAATTTGAGTTATTCAACTG+AGG | 0.620565 | 4.4:+70955263 | None:intergenic |
| TAGTAGTGATGCCTTAGCAA+AGG | 0.620911 | 4.4:-70955339 | MS.gene060774:CDS |
| AGCGTTGTCGTGGTTGAAGG+TGG | 0.623840 | 4.4:-70954144 | MS.gene060774:CDS |
| AAGCAACTCAAGATCCCACC+AGG | 0.626516 | 4.4:-70954419 | MS.gene060774:CDS |
| ATACGATGGAGACGAAAGAG+AGG | 0.628066 | 4.4:-70955549 | MS.gene060774:CDS |
| GCAGGCGGTTCAATAGGCCG+AGG | 0.628346 | 4.4:+70954621 | None:intergenic |
| CATAGAACCGCCAAAACCAA+AGG | 0.629032 | 4.4:-70954478 | MS.gene060774:CDS |
| CGACAGGAGATGATTAGACA+TGG | 0.631416 | 4.4:-70954504 | MS.gene060774:CDS |
| CCAATAAATGTGTTCTGGTG+TGG | 0.635559 | 4.4:-70954023 | MS.gene060774:CDS |
| GATAGGTTGAGGTGGTGGAG+AGG | 0.641107 | 4.4:+70954590 | None:intergenic |
| TTTCTGAGGGACAGTAACGT+CGG | 0.642738 | 4.4:+70955211 | None:intergenic |
| GATTCCGGATATTGAGTGGT+GGG | 0.645660 | 4.4:-70954748 | MS.gene060774:CDS |
| ACCCGATTCCGGATATTGAG+TGG | 0.647460 | 4.4:-70954752 | MS.gene060774:CDS |
| AGCGGGCCTTGGGATGAGAG+AGG | 0.647591 | 4.4:+70954229 | None:intergenic |
| AGAAGAAACTAAAGACCCAA+AGG | 0.655642 | 4.4:-70954548 | MS.gene060774:CDS |
| GGACGTGAAATAGATGAACA+TGG | 0.655823 | 4.4:-70955152 | MS.gene060774:CDS |
| AAATGTGTTCTGGTGTGGCA+AGG | 0.657323 | 4.4:-70954018 | MS.gene060774:CDS |
| GAAGCGCGATGAAGAGAGGG+AGG | 0.664190 | 4.4:-70955504 | MS.gene060774:CDS |
| ACGAGAGAGACAAATCCGAT+AGG | 0.669354 | 4.4:-70955700 | MS.gene060774:CDS |
| AATCACAGAGAAGACCGAGA+AGG | 0.670001 | 4.4:-70955593 | MS.gene060774:CDS |
| TACGATGGAGACGAAAGAGA+GGG | 0.671943 | 4.4:-70955548 | MS.gene060774:CDS |
| CTGAAGCAAAGAAGGAACGT+AGG | 0.673233 | 4.4:-70955391 | MS.gene060774:CDS |
| CATTAACATAAACTCTAGAG+CGG | 0.690364 | 4.4:+70954211 | None:intergenic |
| AAATCGTTTGACTGGATGTG+CGG | 0.693768 | 4.4:-70954181 | MS.gene060774:CDS |
| TCGACAAAACAAAGCTCCTG+CGG | 0.696622 | 4.4:-70954983 | MS.gene060774:CDS |
| TCCGGTCAGATCGATGATGG+CGG | 0.696675 | 4.4:+70955615 | None:intergenic |
| TGTCCCTCAGAAACCAACCA+AGG | 0.741969 | 4.4:-70955201 | MS.gene060774:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATTGAAGAGTAAATT+TGG | - | chr4.4:70954680-70954699 | MS.gene060774:CDS | 15.0% |
| !! | TCTGTAATTTCTATTAAGTT+CGG | + | chr4.4:70954779-70954798 | None:intergenic | 20.0% |
| ! | AATTGGATGATAAGAGAATT+AGG | - | chr4.4:70954156-70954175 | MS.gene060774:CDS | 25.0% |
| ! | ATTGGATGATAAGAGAATTA+GGG | - | chr4.4:70954157-70954176 | MS.gene060774:CDS | 25.0% |
| ! | CAAGATGAGTAATTTACATA+AGG | - | chr4.4:70955126-70955145 | MS.gene060774:CDS | 25.0% |
| ! | TGAAATACTAAAACCTGTAT+TGG | - | chr4.4:70954529-70954548 | MS.gene060774:CDS | 25.0% |
| AAATTACTCATCTTGACCTT+TGG | + | chr4.4:70955121-70955140 | None:intergenic | 30.0% | |
| AACAGAAAATTCATCCTCTT+AGG | + | chr4.4:70954623-70954642 | None:intergenic | 30.0% | |
| ACAAGTTTGTCCAATGTATT+TGG | + | chr4.4:70955310-70955329 | None:intergenic | 30.0% | |
| AGATGAAGGCAATATGAAAA+TGG | - | chr4.4:70954910-70954929 | MS.gene060774:CDS | 30.0% | |
| ATGATAAGAGAATTAGGGTT+AGG | - | chr4.4:70954162-70954181 | MS.gene060774:CDS | 30.0% | |
| ATTAAGTTCGGATTGATATC+AGG | + | chr4.4:70954767-70954786 | None:intergenic | 30.0% | |
| CAAGTTTGTCCAATGTATTT+GGG | + | chr4.4:70955309-70955328 | None:intergenic | 30.0% | |
| TCAAAATGAGGATTAGATTC+AGG | + | chr4.4:70954563-70954582 | None:intergenic | 30.0% | |
| TGATAAGAGAATTAGGGTTA+GGG | - | chr4.4:70954163-70954182 | MS.gene060774:CDS | 30.0% | |
| TGTAATGAAAGCAAAACTGA+AGG | - | chr4.4:70954805-70954824 | MS.gene060774:CDS | 30.0% | |
| TTATGCTTAGACGTATCAAA+TGG | - | chr4.4:70955488-70955507 | MS.gene060774:CDS | 30.0% | |
| ! | AGTAATTTACATAAGGTGCT+AGG | - | chr4.4:70955133-70955152 | MS.gene060774:CDS | 30.0% |
| ! | CATTAACATAAACTCTAGAG+CGG | + | chr4.4:70955372-70955391 | None:intergenic | 30.0% |
| ! | GAATTTGAGTTATTCAACTG+AGG | + | chr4.4:70954320-70954339 | None:intergenic | 30.0% |
| ! | GTAATTTACATAAGGTGCTA+GGG | - | chr4.4:70955134-70955153 | MS.gene060774:CDS | 30.0% |
| !! | ATTAACATAAACTCTAGAGC+GGG | + | chr4.4:70955371-70955390 | None:intergenic | 30.0% |
| AAGCAACCTTAGCACATTAA+AGG | - | chr4.4:70954475-70954494 | MS.gene060774:CDS | 35.0% | |
| ACAAACTTGTCTCACTTTAC+AGG | - | chr4.4:70955320-70955339 | MS.gene060774:CDS | 35.0% | |
| AGAAGAAACTAAAGACCCAA+AGG | - | chr4.4:70955032-70955051 | MS.gene060774:CDS | 35.0% | |
| AGAAGAATATAGCGATGATC+GGG | - | chr4.4:70954133-70954152 | MS.gene060774:CDS | 35.0% | |
| AGCAAGTCAATTAAGAGGTA+TGG | - | chr4.4:70955460-70955479 | MS.gene060774:CDS | 35.0% | |
| CAAACTTGTCTCACTTTACA+GGG | - | chr4.4:70955321-70955340 | MS.gene060774:CDS | 35.0% | |
| CATTTGTATAGTTGACAGCT+TGG | + | chr4.4:70955693-70955712 | None:intergenic | 35.0% | |
| GAGAAGAATATAGCGATGAT+CGG | - | chr4.4:70954132-70954151 | MS.gene060774:CDS | 35.0% | |
| GGAAGAATTCAACTTTCATG+TGG | - | chr4.4:70954931-70954950 | MS.gene060774:CDS | 35.0% | |
| TGTTGACCTTTAATGTGCTA+AGG | + | chr4.4:70954484-70954503 | None:intergenic | 35.0% | |
| TTTAATGTGCTAAGGTTGCT+TGG | + | chr4.4:70954476-70954495 | None:intergenic | 35.0% | |
| ! | AATTTTCTGTTTGTGGAGGA+AGG | - | chr4.4:70954632-70954651 | MS.gene060774:CDS | 35.0% |
| ! | CTTCTGCATTCTGGAAATTA+TGG | - | chr4.4:70954863-70954882 | MS.gene060774:CDS | 35.0% |
| ! | GAGGATGAATTTTCTGTTTG+TGG | - | chr4.4:70954625-70954644 | MS.gene060774:CDS | 35.0% |
| ! | GATGAATTTTCTGTTTGTGG+AGG | - | chr4.4:70954628-70954647 | MS.gene060774:CDS | 35.0% |
| ! | GCAAGTCAATTAAGAGGTAT+GGG | - | chr4.4:70955461-70955480 | MS.gene060774:CDS | 35.0% |
| ! | GTAAAGTTTTTGTGGATGCT+GGG | - | chr4.4:70955650-70955669 | MS.gene060774:CDS | 35.0% |
| ! | GTTTGATGACCCAAATACAT+TGG | - | chr4.4:70955297-70955316 | MS.gene060774:CDS | 35.0% |
| ! | TAAAGTTTTTGTGGATGCTG+GGG | - | chr4.4:70955651-70955670 | MS.gene060774:CDS | 35.0% |
| !! | AGGAGATTTGGTGATAAACT+TGG | - | chr4.4:70954209-70954228 | MS.gene060774:CDS | 35.0% |
| !! | CCTCATTTTGATGAGAGAAT+GGG | - | chr4.4:70954572-70954591 | MS.gene060774:CDS | 35.0% |
| !! | TCCTCATTTTGATGAGAGAA+TGG | - | chr4.4:70954571-70954590 | MS.gene060774:CDS | 35.0% |
| AAATCGTTTGACTGGATGTG+CGG | - | chr4.4:70955399-70955418 | MS.gene060774:CDS | 40.0% | |
| AAGAAGGAACGTAGGAGATT+TGG | - | chr4.4:70954197-70954216 | MS.gene060774:CDS | 40.0% | |
| ACCTATCAAGCCAACTAAAC+AGG | - | chr4.4:70955006-70955025 | MS.gene060774:CDS | 40.0% | |
| ACTTTCATGTGGAACATCCT+CGG | - | chr4.4:70954942-70954961 | MS.gene060774:CDS | 40.0% | |
| ATATAGCGATGATCGGGAAT+TGG | - | chr4.4:70954139-70954158 | MS.gene060774:CDS | 40.0% | |
| CCAATAAATGTGTTCTGGTG+TGG | - | chr4.4:70955557-70955576 | MS.gene060774:CDS | 40.0% | |
| CCACACCAGAACACATTTAT+TGG | + | chr4.4:70955560-70955579 | None:intergenic | 40.0% | |
| CCCATTCTCTCATCAAAATG+AGG | + | chr4.4:70954575-70954594 | None:intergenic | 40.0% | |
| CGATGCCAATAAATGTGTTC+TGG | - | chr4.4:70955552-70955571 | MS.gene060774:CDS | 40.0% | |
| GAACCTATTGAAGCTCGATT+TGG | + | chr4.4:70955596-70955615 | None:intergenic | 40.0% | |
| GCTCAACAAAATCGTTTGAC+TGG | - | chr4.4:70955391-70955410 | MS.gene060774:CDS | 40.0% | |
| GCTTAGACGTATCAAATGGA+GGG | - | chr4.4:70955492-70955511 | MS.gene060774:CDS | 40.0% | |
| GGACGTGAAATAGATGAACA+TGG | - | chr4.4:70954428-70954447 | MS.gene060774:CDS | 40.0% | |
| GTGGAAGCAAGTCAATTAAG+AGG | - | chr4.4:70955455-70955474 | MS.gene060774:CDS | 40.0% | |
| TAGTAGTGATGCCTTAGCAA+AGG | - | chr4.4:70954241-70954260 | MS.gene060774:CDS | 40.0% | |
| TCTATCTTTCCTCTTATGCG+AGG | + | chr4.4:70954114-70954133 | None:intergenic | 40.0% | |
| TGCTTAGACGTATCAAATGG+AGG | - | chr4.4:70955491-70955510 | MS.gene060774:CDS | 40.0% | |
| TGTTTGTGGAGGAAGGAAAA+TGG | - | chr4.4:70954639-70954658 | MS.gene060774:CDS | 40.0% | |
| TTCATCTATAGTACCGTTGG+CGG | + | chr4.4:70954897-70954916 | None:intergenic | 40.0% | |
| TTCATCTATTTCACGTCCCT+GGG | + | chr4.4:70954426-70954445 | None:intergenic | 40.0% | |
| TTCTTCTGCTCCTGTTTAGT+TGG | + | chr4.4:70955019-70955038 | None:intergenic | 40.0% | |
| TTGCCAAATCGAGCTTCAAT+AGG | - | chr4.4:70955590-70955609 | MS.gene060774:CDS | 40.0% | |
| ! | AGCTGCTCGTAAAGTTTTTG+TGG | - | chr4.4:70955642-70955661 | MS.gene060774:CDS | 40.0% |
| ! | CGTAAAGTTTTTGTGGATGC+TGG | - | chr4.4:70955649-70955668 | MS.gene060774:CDS | 40.0% |
| ! | TCAGAAGAAAGCACACAGTT+GGG | - | chr4.4:70954338-70954357 | MS.gene060774:CDS | 40.0% |
| ! | TTCAGAAGAAAGCACACAGT+TGG | - | chr4.4:70954337-70954356 | MS.gene060774:CDS | 40.0% |
| !! | CTCATCTTGACCTTTGGTTT+TGG | + | chr4.4:70955115-70955134 | None:intergenic | 40.0% |
| !! | TAGGGTTTCTGAAGCAAAGA+AGG | - | chr4.4:70954181-70954200 | MS.gene060774:CDS | 40.0% |
| !! | TCCTGTTTAGTTGGCTTGAT+AGG | + | chr4.4:70955010-70955029 | None:intergenic | 40.0% |
| !! | TTAGTTGGCTTGATAGGTTG+AGG | + | chr4.4:70955004-70955023 | None:intergenic | 40.0% |
| !!! | ATCTTGACCTTTGGTTTTGG+CGG | + | chr4.4:70955112-70955131 | None:intergenic | 40.0% |
| AAAACTGAAGGACCCGATTC+CGG | - | chr4.4:70954817-70954836 | MS.gene060774:CDS | 45.0% | |
| AAAGAGAGGGTAGCAAAGGT+AGG | - | chr4.4:70954045-70954064 | MS.gene060774:CDS | 45.0% | |
| AAATGACCTCTCTCATCCCA+AGG | - | chr4.4:70955345-70955364 | MS.gene060774:CDS | 45.0% | |
| AAATGTGTTCTGGTGTGGCA+AGG | - | chr4.4:70955562-70955581 | MS.gene060774:CDS | 45.0% | |
| AATCACAGAGAAGACCGAGA+AGG | - | chr4.4:70953987-70954006 | MS.gene060774:CDS | 45.0% | |
| ACAGCTTGGTCCCAATAATG+AGG | + | chr4.4:70955679-70955698 | None:intergenic | 45.0% | |
| ACCACTCAATATCCGGAATC+GGG | + | chr4.4:70954832-70954851 | None:intergenic | 45.0% | |
| ACGAGAGAGACAAATCCGAT+AGG | - | chr4.4:70953880-70953899 | MS.gene060774:CDS | 45.0% | |
| ACTGGATGTGCGGTGATTTA+TGG | - | chr4.4:70955409-70955428 | MS.gene060774:CDS | 45.0% | |
| AGCTAAGGTGAAAAAGCGAC+AGG | - | chr4.4:70955060-70955079 | MS.gene060774:CDS | 45.0% | |
| AGCTCAAGCAAAAGAGCAGA+AGG | - | chr4.4:70954706-70954725 | MS.gene060774:CDS | 45.0% | |
| ATACGATGGAGACGAAAGAG+AGG | - | chr4.4:70954031-70954050 | MS.gene060774:CDS | 45.0% | |
| ATGCTGGGGTTCCTCATTAT+TGG | - | chr4.4:70955665-70955684 | MS.gene060774:CDS | 45.0% | |
| CAAACAAGCACAGGTAGCAA+AGG | - | chr4.4:70954730-70954749 | MS.gene060774:CDS | 45.0% | |
| CACCACTCAATATCCGGAAT+CGG | + | chr4.4:70954833-70954852 | None:intergenic | 45.0% | |
| CACCTTAGCTATACGCCTTT+GGG | + | chr4.4:70955050-70955069 | None:intergenic | 45.0% | |
| CATAGAACCGCCAAAACCAA+AGG | - | chr4.4:70955102-70955121 | MS.gene060774:CDS | 45.0% | |
| CGACAGGAGATGATTAGACA+TGG | - | chr4.4:70955076-70955095 | MS.gene060774:CDS | 45.0% | |
| CTGAAGCAAAGAAGGAACGT+AGG | - | chr4.4:70954189-70954208 | MS.gene060774:CDS | 45.0% | |
| CTTTGCTACCTGTGCTTGTT+TGG | + | chr4.4:70954732-70954751 | None:intergenic | 45.0% | |
| GATTCCGGATATTGAGTGGT+GGG | - | chr4.4:70954832-70954851 | MS.gene060774:CDS | 45.0% | |
| GCCAACGGTACTATAGATGA+AGG | - | chr4.4:70954896-70954915 | MS.gene060774:CDS | 45.0% | |
| GCCTTCATCTATAGTACCGT+TGG | + | chr4.4:70954900-70954919 | None:intergenic | 45.0% | |
| GTTACGGTCACAGTCATGTT+CGG | + | chr4.4:70953913-70953932 | None:intergenic | 45.0% | |
| GTTCATCTATTTCACGTCCC+TGG | + | chr4.4:70954427-70954446 | None:intergenic | 45.0% | |
| TACGATGGAGACGAAAGAGA+GGG | - | chr4.4:70954032-70954051 | MS.gene060774:CDS | 45.0% | |
| TCACCTTAGCTATACGCCTT+TGG | + | chr4.4:70955051-70955070 | None:intergenic | 45.0% | |
| TCAGGATCGACATCCAATAC+AGG | + | chr4.4:70954545-70954564 | None:intergenic | 45.0% | |
| TCGACAAAACAAAGCTCCTG+CGG | - | chr4.4:70954597-70954616 | MS.gene060774:CDS | 45.0% | |
| TGCCTTAGCAAAGGCTAAGA+AGG | - | chr4.4:70954250-70954269 | MS.gene060774:CDS | 45.0% | |
| TGCTGGGGTTCCTCATTATT+GGG | - | chr4.4:70955666-70955685 | MS.gene060774:CDS | 45.0% | |
| ! | AGCCTTCTTAGCCTTTGCTA+AGG | + | chr4.4:70954255-70954274 | None:intergenic | 45.0% |
| ! | CTAAGGCATCACTACTAGAG+AGG | + | chr4.4:70954238-70954257 | None:intergenic | 45.0% |
| ! | TTATGGTGTTAGCGTTGTCG+TGG | - | chr4.4:70955426-70955445 | MS.gene060774:CDS | 45.0% |
| ! | TTTCTGAGGGACAGTAACGT+CGG | + | chr4.4:70954372-70954391 | None:intergenic | 45.0% |
| !! | ACGTACTTCCTTTTCAAGCC+TGG | + | chr4.4:70955182-70955201 | None:intergenic | 45.0% |
| !! | ACTTCCTTTTCAAGCCTGGT+GGG | + | chr4.4:70955178-70955197 | None:intergenic | 45.0% |
| !! | TACTTCCTTTTCAAGCCTGG+TGG | + | chr4.4:70955179-70955198 | None:intergenic | 45.0% |
| AAGACGAAGAACAGGAGCCT+TGG | + | chr4.4:70954399-70954418 | None:intergenic | 50.0% | |
| AAGCAACTCAAGATCCCACC+AGG | - | chr4.4:70955161-70955180 | MS.gene060774:CDS | 50.0% | |
| AATCGAAGCGCGATGAAGAG+AGG | - | chr4.4:70954072-70954091 | MS.gene060774:CDS | 50.0% | |
| AATTCATCCTCTTAGGCCGC+AGG | + | chr4.4:70954616-70954635 | None:intergenic | 50.0% | |
| ACCCGATTCCGGATATTGAG+TGG | - | chr4.4:70954828-70954847 | MS.gene060774:CDS | 50.0% | |
| ACGTCCCACCACTCAATATC+CGG | + | chr4.4:70954839-70954858 | None:intergenic | 50.0% | |
| ACTGTGACCGTAACCATCAC+CGG | - | chr4.4:70953919-70953938 | MS.gene060774:CDS | 50.0% | |
| AGATCCCACCAGGCTTGAAA+AGG | - | chr4.4:70955171-70955190 | MS.gene060774:CDS | 50.0% | |
| AGGAAGCAGAGACAGGGATA+TGG | - | chr4.4:70954007-70954026 | MS.gene060774:CDS | 50.0% | |
| ATCGAAGCGCGATGAAGAGA+GGG | - | chr4.4:70954073-70954092 | MS.gene060774:CDS | 50.0% | |
| CGATTCCGGATATTGAGTGG+TGG | - | chr4.4:70954831-70954850 | MS.gene060774:CDS | 50.0% | |
| CTCGATACTCCTCGCATAAG+AGG | - | chr4.4:70954102-70954121 | MS.gene060774:CDS | 50.0% | |
| CTCGGTCTTCTCTGTGATTC+CGG | + | chr4.4:70953986-70954005 | None:intergenic | 50.0% | |
| GACAGGGATATGGGATACGA+TGG | - | chr4.4:70954017-70954036 | MS.gene060774:CDS | 50.0% | |
| GACGAAAGAGAGGGTAGCAA+AGG | - | chr4.4:70954041-70954060 | MS.gene060774:CDS | 50.0% | |
| GATTCCGGTCAGATCGATGA+TGG | + | chr4.4:70953971-70953990 | None:intergenic | 50.0% | |
| GGAAGCAGAGACAGGGATAT+GGG | - | chr4.4:70954008-70954027 | MS.gene060774:CDS | 50.0% | |
| GTGAGCAGGCTCACATAGAT+AGG | - | chr4.4:70955218-70955237 | MS.gene060774:CDS | 50.0% | |
| GTTAGCGTTGTCGTGGTTGA+AGG | - | chr4.4:70955433-70955452 | MS.gene060774:CDS | 50.0% | |
| TATGGTGACATTGCCGCCAA+CGG | - | chr4.4:70954881-70954900 | MS.gene060774:CDS | 50.0% | |
| TGTCCCTCAGAAACCAACCA+AGG | - | chr4.4:70954379-70954398 | MS.gene060774:CDS | 50.0% | |
| ! | GACCCAAAGGCGTATAGCTA+AGG | - | chr4.4:70955045-70955064 | MS.gene060774:CDS | 50.0% |
| ! | TTCTGAGGGACAGTAACGTC+GGG | + | chr4.4:70954371-70954390 | None:intergenic | 50.0% |
| !! | ATAAACTCTAGAGCGGGCCT+TGG | + | chr4.4:70955365-70955384 | None:intergenic | 50.0% |
| !! | ATGTTCGGAGTGTCGCCTAT+CGG | + | chr4.4:70953898-70953917 | None:intergenic | 50.0% |
| !! | GAGCCTTGGTTGGTTTCTGA+GGG | + | chr4.4:70954385-70954404 | None:intergenic | 50.0% |
| !! | GTTGGCTTGATAGGTTGAGG+TGG | + | chr4.4:70955001-70955020 | None:intergenic | 50.0% |
| !! | TAAACTCTAGAGCGGGCCTT+GGG | + | chr4.4:70955364-70955383 | None:intergenic | 50.0% |
| ACCGAGAAGGAAGCAGAGAC+AGG | - | chr4.4:70954000-70954019 | MS.gene060774:CDS | 55.0% | |
| ACCGCCATCATCGATCTGAC+CGG | - | chr4.4:70953964-70953983 | MS.gene060774:CDS | 55.0% | |
| ACCGTAACCATCACCGGAAC+CGG | - | chr4.4:70953925-70953944 | MS.gene060774:CDS | 55.0% | |
| AGCGTTGTCGTGGTTGAAGG+TGG | - | chr4.4:70955436-70955455 | MS.gene060774:CDS | 55.0% | |
| CCCTGTCTCTGCTTCCTTCT+CGG | + | chr4.4:70954004-70954023 | None:intergenic | 55.0% | |
| CCGAGAAGGAAGCAGAGACA+GGG | - | chr4.4:70954001-70954020 | MS.gene060774:CDS | 55.0% | |
| CGAAGAACAGGAGCCTTGGT+TGG | + | chr4.4:70954395-70954414 | None:intergenic | 55.0% | |
| GACGTGGCACTTCTGCATTC+TGG | - | chr4.4:70954854-70954873 | MS.gene060774:CDS | 55.0% | |
| GCAGAAGGCCAAACAAGCAC+AGG | - | chr4.4:70954721-70954740 | MS.gene060774:CDS | 55.0% | |
| GGTGGTCATCAGAATCGTGC+CGG | + | chr4.4:70953947-70953966 | None:intergenic | 55.0% | |
| GTTCTTCGTCTTGACGCCCA+GGG | - | chr4.4:70954407-70954426 | MS.gene060774:CDS | 55.0% | |
| TGCTGAGCTGCGTGAGAAGA+AGG | - | chr4.4:70955264-70955283 | MS.gene060774:CDS | 55.0% | |
| TGGGCGTCAAGACGAAGAAC+AGG | + | chr4.4:70954407-70954426 | None:intergenic | 55.0% | |
| TGTTCTTCGTCTTGACGCCC+AGG | - | chr4.4:70954406-70954425 | MS.gene060774:CDS | 55.0% | |
| TTCTTCTCACGCAGCTCAGC+AGG | + | chr4.4:70955265-70955284 | None:intergenic | 55.0% | |
| ! | GGATATTGAGTGGTGGGACG+TGG | - | chr4.4:70954838-70954857 | MS.gene060774:CDS | 55.0% |
| ! | GGCTTGATAGGTTGAGGTGG+TGG | + | chr4.4:70954998-70955017 | None:intergenic | 55.0% |
| ! | TCCGGTCAGATCGATGATGG+CGG | + | chr4.4:70953968-70953987 | None:intergenic | 55.0% |
| !! | CATCAGAATCGTGCCGGTTC+CGG | + | chr4.4:70953941-70953960 | None:intergenic | 55.0% |
| !! | GATAGGTTGAGGTGGTGGAG+AGG | + | chr4.4:70954993-70955012 | None:intergenic | 55.0% |
| !! | GGAGCCTTGGTTGGTTTCTG+AGG | + | chr4.4:70954386-70954405 | None:intergenic | 55.0% |
| CAAAGCTCCTGCGGCCTAAG+AGG | - | chr4.4:70954606-70954625 | MS.gene060774:CDS | 60.0% | |
| GAAGCGCGATGAAGAGAGGG+AGG | - | chr4.4:70954076-70954095 | MS.gene060774:CDS | 60.0% | |
| GGCTCAGCAGGCGGTTCAAT+AGG | + | chr4.4:70954968-70954987 | None:intergenic | 60.0% | |
| ! | GCCGGTTCCGGTGATGGTTA+CGG | + | chr4.4:70953929-70953948 | None:intergenic | 60.0% |
| !! | AATCGTGCCGGTTCCGGTGA+TGG | + | chr4.4:70953935-70953954 | None:intergenic | 60.0% |
| !! | AGGTTGAGGTGGTGGAGAGG+CGG | + | chr4.4:70954990-70955009 | None:intergenic | 60.0% |
| !! | GGTCAGATCGATGATGGCGG+TGG | + | chr4.4:70953965-70953984 | None:intergenic | 60.0% |
| AGCGGGCCTTGGGATGAGAG+AGG | + | chr4.4:70955354-70955373 | None:intergenic | 65.0% | |
| GCAGGCGGTTCAATAGGCCG+AGG | + | chr4.4:70954962-70954981 | None:intergenic | 65.0% | |
| TGCAGCTGCTGAGCGTGAGC+AGG | - | chr4.4:70955204-70955223 | MS.gene060774:CDS | 65.0% | |
| !! | GGTTGAGGTGGTGGAGAGGC+GGG | + | chr4.4:70954989-70955008 | None:intergenic | 65.0% |
| ! | GGAGAGGCGGGCTCAGCAGG+CGG | + | chr4.4:70954977-70954996 | None:intergenic | 75.0% |
| ! | GGTGGAGAGGCGGGCTCAGC+AGG | + | chr4.4:70954980-70954999 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 70953876 | 70955726 | 70953876 | ID=MS.gene060774 |
| chr4.4 | mRNA | 70953876 | 70955726 | 70953876 | ID=MS.gene060774.t1;Parent=MS.gene060774 |
| chr4.4 | exon | 70953876 | 70955726 | 70953876 | ID=MS.gene060774.t1.exon1;Parent=MS.gene060774.t1 |
| chr4.4 | CDS | 70953876 | 70955726 | 70953876 | ID=cds.MS.gene060774.t1;Parent=MS.gene060774.t1 |
| Gene Sequence |
| Protein sequence |
