Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061143.t1 | XP_003606813.1 | 88.2 | 415 | 49 | 0 | 1 | 415 | 1 | 415 | 2.50E-182 | 648.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061143.t1 | Q8VYD3 | 45.8 | 415 | 188 | 5 | 1 | 415 | 1 | 378 | 1.2e-84 | 315.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061143.t1 | G7JEV2 | 88.2 | 415 | 49 | 0 | 1 | 415 | 1 | 415 | 1.8e-182 | 648.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene061143 | MS.gene92345 | 0.814812 | 1.27E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061143.t1 | MTR_4g068010 | 95.904 | 415 | 17 | 0 | 1 | 415 | 1 | 415 | 0.0 | 667 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061143.t1 | AT2G46200 | 50.240 | 416 | 164 | 6 | 1 | 413 | 1 | 376 | 9.82e-134 | 389 |
| MS.gene061143.t1 | AT2G46200 | 50.240 | 416 | 164 | 6 | 1 | 413 | 1 | 376 | 9.82e-134 | 389 |
| MS.gene061143.t1 | AT2G46200 | 48.082 | 391 | 160 | 6 | 1 | 388 | 1 | 351 | 4.07e-115 | 340 |
| MS.gene061143.t1 | AT2G46200 | 48.021 | 379 | 154 | 6 | 1 | 376 | 1 | 339 | 7.67e-109 | 324 |
Find 110 sgRNAs with CRISPR-Local
Find 370 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGTTCTGCATGGCTTTAC+TGG | 0.125151 | 1.4:+77748861 | None:intergenic |
| CACGAAAGTCAAGTTCCTTT+TGG | 0.217981 | 1.4:-77752820 | MS.gene061143:CDS |
| CTTCAACAACCATTGCTTCT+TGG | 0.230197 | 1.4:+77752405 | None:intergenic |
| CTCCTCCAGCCAACGAGATA+TGG | 0.241122 | 1.4:-77748173 | MS.gene061143:CDS |
| ATAGAACTCAATCGGTAAAT+TGG | 0.263314 | 1.4:+77748675 | None:intergenic |
| TTCAACAACCATTGCTTCTT+GGG | 0.270988 | 1.4:+77752406 | None:intergenic |
| CATCTTCCTCTGGGAGAAAA+TGG | 0.275665 | 1.4:+77748992 | None:intergenic |
| GAACCGATCACAGACATTTC+TGG | 0.278238 | 1.4:+77752793 | None:intergenic |
| GAAATGTCTGTGATCGGTTC+AGG | 0.283630 | 1.4:-77752790 | MS.gene061143:CDS |
| CCTTCCTCCCGGTCGAATAT+AGG | 0.327458 | 1.4:+77748352 | None:intergenic |
| GAACTTGACTTTCGTGGTTC+GGG | 0.347512 | 1.4:+77752827 | None:intergenic |
| CGTGGTTCGGGTGGTAATAT+TGG | 0.359315 | 1.4:+77752839 | None:intergenic |
| CAATGATGAAAGTCAGATTA+AGG | 0.364871 | 1.4:-77748818 | MS.gene061143:CDS |
| GGAACTTGACTTTCGTGGTT+CGG | 0.368648 | 1.4:+77752826 | None:intergenic |
| CATGGCTTTACTGGATTCCT+TGG | 0.386181 | 1.4:+77748870 | None:intergenic |
| ATCCCTCTTCGGCTACACTA+TGG | 0.392785 | 1.4:+77748776 | None:intergenic |
| TGGAGGAGCTTATGATCCTT+TGG | 0.396538 | 1.4:-77748698 | MS.gene061143:CDS |
| CAAAAGGAACTTGACTTTCG+TGG | 0.409967 | 1.4:+77752821 | None:intergenic |
| ACAGCTCGAGTTGCTCTTGA+TGG | 0.410405 | 1.4:-77750613 | MS.gene061143:intron |
| CGAGATATGGGCATCTTACT+TGG | 0.410996 | 1.4:-77748160 | MS.gene061143:CDS |
| GTTAAAACTAAAAGCTCAGC+TGG | 0.412096 | 1.4:-77752366 | MS.gene061143:CDS |
| GATACTCTAATTCTTGTAAA+GGG | 0.414812 | 1.4:-77752758 | MS.gene061143:CDS |
| CTTGATACTTGCAATTTCCT+TGG | 0.418968 | 1.4:+77752041 | None:intergenic |
| AGGCTGATGAATGGAGGGCT+AGG | 0.421411 | 1.4:-77752071 | MS.gene061143:CDS |
| ATCTCGTTGGCTGGAGGAGG+AGG | 0.421763 | 1.4:+77748177 | None:intergenic |
| AGAAGAGGAGCGTGAAGCTT+TGG | 0.426297 | 1.4:-77748935 | MS.gene061143:CDS |
| GCATCCGAAGGACAGAACTA+TGG | 0.438386 | 1.4:-77748718 | MS.gene061143:CDS |
| AGATGATCAAAGAGAGTAAA+GGG | 0.442016 | 1.4:-77752514 | MS.gene061143:CDS |
| GTCAGATTAAGGAGAACAAC+AGG | 0.444589 | 1.4:-77748807 | MS.gene061143:CDS |
| GAAGAAGAAATTAGAGTCTG+AGG | 0.447206 | 1.4:-77751380 | MS.gene061143:intron |
| TCCTCCATAGTTCTGTCCTT+CGG | 0.451599 | 1.4:+77748714 | None:intergenic |
| ATGTACTTTCTGTAGGCAAA+AGG | 0.453487 | 1.4:-77752552 | MS.gene061143:intron |
| ACTGCTGATTTCTCTTCCCA+TGG | 0.453492 | 1.4:+77752311 | None:intergenic |
| GAGTTCTATCATTATTATCA+TGG | 0.459001 | 1.4:-77748661 | MS.gene061143:CDS |
| TCCTCCAGCCAACGAGATAT+GGG | 0.464743 | 1.4:-77748172 | MS.gene061143:CDS |
| AAAGGTTGTGGTGGCGGCAG+AGG | 0.470722 | 1.4:+77752881 | None:intergenic |
| CCCTCCATTCATCAGCCTCT+CGG | 0.473533 | 1.4:+77752076 | None:intergenic |
| ATAAAGTGCACAAGTCTAAA+CGG | 0.474518 | 1.4:-77752274 | MS.gene061143:CDS |
| GGTGCAGACTGAAAAGGAAC+TGG | 0.476101 | 1.4:+77752902 | None:intergenic |
| GTGCACTTTATTCGTAAACT+TGG | 0.479857 | 1.4:+77752286 | None:intergenic |
| TTTCTTTCGAAAGTTTCCCT+TGG | 0.482743 | 1.4:+77748842 | None:intergenic |
| AAAATTTATCATCTTCCTCT+GGG | 0.483774 | 1.4:+77748983 | None:intergenic |
| AATCTCATGCAGGTTAGAAT+AGG | 0.491283 | 1.4:-77748383 | MS.gene061143:intron |
| AGATACTCTAATTCTTGTAA+AGG | 0.491340 | 1.4:-77752759 | MS.gene061143:CDS |
| TCAAGAAAAGGTTGTGGTGG+CGG | 0.494437 | 1.4:+77752875 | None:intergenic |
| GACATTTCTGGTCTCCCAAA+AGG | 0.495679 | 1.4:+77752805 | None:intergenic |
| CAAGGAAATTGCAAGTATCA+AGG | 0.496356 | 1.4:-77752040 | MS.gene061143:intron |
| GGTAATATTGGAAGCTGCAT+AGG | 0.497498 | 1.4:+77752851 | None:intergenic |
| GATGCCCATATCTCGTTGGC+TGG | 0.497660 | 1.4:+77748168 | None:intergenic |
| CATATCTCGTTGGCTGGAGG+AGG | 0.504973 | 1.4:+77748174 | None:intergenic |
| TAATAATGATAGAACTCAAT+CGG | 0.507283 | 1.4:+77748667 | None:intergenic |
| AGTTGCATCTAATCCCTCTT+CGG | 0.512994 | 1.4:+77748765 | None:intergenic |
| AAGTTTCCCTTGGTTCTGCA+TGG | 0.515266 | 1.4:+77748852 | None:intergenic |
| AGCTGCATAGGTTCAAGAAA+AGG | 0.516752 | 1.4:+77752863 | None:intergenic |
| TTGACCGAGAGGCTGATGAA+TGG | 0.517727 | 1.4:-77752080 | MS.gene061143:CDS |
| GGAGGCTGAACCCAGTGTCC+TGG | 0.524624 | 1.4:+77748195 | None:intergenic |
| GAAGCGTATTGCAGAAATGC+TGG | 0.525339 | 1.4:-77752225 | MS.gene061143:CDS |
| TTGCGGATGAAGCAAGTCCA+TGG | 0.526086 | 1.4:-77752328 | MS.gene061143:CDS |
| TCAGGCTGCCGTGGAAGAAG+AGG | 0.526936 | 1.4:-77748950 | MS.gene061143:CDS |
| AAATGTCTGTGATCGGTTCA+GGG | 0.536858 | 1.4:-77752789 | MS.gene061143:CDS |
| CCTATATTCGACCGGGAGGA+AGG | 0.539475 | 1.4:-77748352 | MS.gene061143:intron |
| ATGGGATGCCTATATTCGAC+CGG | 0.541340 | 1.4:-77748360 | MS.gene061143:CDS |
| TGAAGTGTCTAGAGGACAGA+GGG | 0.549595 | 1.4:-77752442 | MS.gene061143:CDS |
| TCATGCAGGTTAGAATAGGA+TGG | 0.550259 | 1.4:-77748379 | MS.gene061143:intron |
| CTTGACTTTCGTGGTTCGGG+TGG | 0.555099 | 1.4:+77752830 | None:intergenic |
| AAGATGATCAAAGAGAGTAA+AGG | 0.555428 | 1.4:-77752515 | MS.gene061143:CDS |
| CCATGAGTTACATCTTCTAA+AGG | 0.555479 | 1.4:+77752491 | None:intergenic |
| TATAGAAACCCAAGAAGCAA+TGG | 0.564621 | 1.4:-77752414 | MS.gene061143:CDS |
| GGCAGAGGTGCAGACTGAAA+AGG | 0.568119 | 1.4:+77752896 | None:intergenic |
| GGCTGATGAATGGAGGGCTA+GGG | 0.568574 | 1.4:-77752070 | MS.gene061143:CDS |
| ACTTTGTGCAGTCGCATACC+AGG | 0.571448 | 1.4:-77748213 | MS.gene061143:intron |
| TCATCCGCAACATATCTGAA+TGG | 0.572382 | 1.4:+77752341 | None:intergenic |
| ACCGAGAGGCTGATGAATGG+AGG | 0.572524 | 1.4:-77752077 | MS.gene061143:CDS |
| AGTCTAAACGGAATAAACTC+TGG | 0.573320 | 1.4:-77752262 | MS.gene061143:CDS |
| CAGTCGCATACCAGGACACT+GGG | 0.574072 | 1.4:-77748205 | MS.gene061143:CDS |
| TCATGGAAGCAACAATGACA+TGG | 0.575257 | 1.4:-77748644 | MS.gene061143:CDS |
| CATGCAGGTTAGAATAGGAT+GGG | 0.585291 | 1.4:-77748378 | MS.gene061143:intron |
| AGATGCAATTGCAACTGCCA+AGG | 0.586598 | 1.4:-77748887 | MS.gene061143:CDS |
| TTCACGCTCCTCTTCTTCCA+CGG | 0.587712 | 1.4:+77748942 | None:intergenic |
| GTCCATAGTGTAGCCGAAGA+GGG | 0.591775 | 1.4:-77748778 | MS.gene061143:CDS |
| TGAGAAAGTTCAGGCTGCCG+TGG | 0.593832 | 1.4:-77748959 | MS.gene061143:CDS |
| GCTCGAGTTGCTCTTGATGG+AGG | 0.597688 | 1.4:-77750610 | MS.gene061143:CDS |
| CCGAGAGGCTGATGAATGGA+GGG | 0.598428 | 1.4:-77752076 | MS.gene061143:CDS |
| AGACCAGAAATGTCTGTGAT+CGG | 0.603717 | 1.4:-77752796 | MS.gene061143:CDS |
| AGTAAAGCCATGCAGAACCA+AGG | 0.606345 | 1.4:-77748859 | MS.gene061143:CDS |
| CCTTTAGAAGATGTAACTCA+TGG | 0.608456 | 1.4:-77752491 | MS.gene061143:CDS |
| ATGAAGTGTCTAGAGGACAG+AGG | 0.609005 | 1.4:-77752443 | MS.gene061143:CDS |
| GCCCATATCTCGTTGGCTGG+AGG | 0.613148 | 1.4:+77748171 | None:intergenic |
| TGCGGATGAAGCAAGTCCAT+GGG | 0.617590 | 1.4:-77752327 | MS.gene061143:CDS |
| TATTGCAGAAATGCTGGCAA+AGG | 0.618883 | 1.4:-77752219 | MS.gene061143:intron |
| AGTCCATAGTGTAGCCGAAG+AGG | 0.619578 | 1.4:-77748779 | MS.gene061143:CDS |
| GTAAAGCCATGCAGAACCAA+GGG | 0.621842 | 1.4:-77748858 | MS.gene061143:CDS |
| GCAGTCGCATACCAGGACAC+TGG | 0.624972 | 1.4:-77748206 | MS.gene061143:intron |
| GTAAGATGCCCATATCTCGT+TGG | 0.625297 | 1.4:+77748164 | None:intergenic |
| GGAGCCATTCAGATATGTTG+CGG | 0.629602 | 1.4:-77752345 | MS.gene061143:CDS |
| TATGGGCATCTTACTTGGTG+AGG | 0.633963 | 1.4:-77748155 | MS.gene061143:CDS |
| CTAAACGGAATAAACTCTGG+AGG | 0.641658 | 1.4:-77752259 | MS.gene061143:CDS |
| TGGGATGCCTATATTCGACC+GGG | 0.643337 | 1.4:-77748359 | MS.gene061143:CDS |
| GGTTCAAGAAAAGGTTGTGG+TGG | 0.646271 | 1.4:+77752872 | None:intergenic |
| TCTAGTAACATAGCATCCGA+AGG | 0.647457 | 1.4:-77748730 | MS.gene061143:CDS |
| TCAATCGGTAAATTGGCCAA+AGG | 0.652661 | 1.4:+77748682 | None:intergenic |
| GAGGGCTAGGGAGATTGCCA+AGG | 0.655856 | 1.4:-77752058 | MS.gene061143:CDS |
| TCCGAAGGACAGAACTATGG+AGG | 0.665419 | 1.4:-77748715 | MS.gene061143:CDS |
| CATGGAAGCAACAATGACAT+GGG | 0.669121 | 1.4:-77748643 | MS.gene061143:CDS |
| TGACATGGGCACATTGATCG+AGG | 0.675577 | 1.4:-77748629 | MS.gene061143:intron |
| ATAGGTTCAAGAAAAGGTTG+TGG | 0.678067 | 1.4:+77752869 | None:intergenic |
| ATTTGATCAAATTGACCGAG+AGG | 0.685541 | 1.4:-77752091 | MS.gene061143:CDS |
| ATGGGAAGAGAAATCAGCAG+TGG | 0.688987 | 1.4:-77752309 | MS.gene061143:CDS |
| GATGCCTATATTCGACCGGG+AGG | 0.757591 | 1.4:-77748356 | MS.gene061143:CDS |
| GAAGTGTCTAGAGGACAGAG+GGG | 0.760985 | 1.4:-77752441 | MS.gene061143:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+AGG | + | chr1.4:77750163-77750144 | None:intergenic | 0.0% |
| !! | ATGATATTTATATAAAGTTT+GGG | - | chr1.4:77751233-77751252 | MS.gene061143:intron | 10.0% |
| !! | CTATATATTCTATAAATATT+TGG | + | chr1.4:77750965-77750984 | None:intergenic | 10.0% |
| !! | GTAAAAAAATATAAAAGAAT+AGG | + | chr1.4:77751751-77751770 | None:intergenic | 10.0% |
| !! | TATGATATTTATATAAAGTT+TGG | - | chr1.4:77751232-77751251 | MS.gene061143:intron | 10.0% |
| !!! | ACTTTATTTTGTTTATATAT+AGG | - | chr1.4:77749767-77749786 | MS.gene061143:intron | 10.0% |
| !!! | ATAATTACTAAATTTTGTAA+AGG | + | chr1.4:77750812-77750831 | None:intergenic | 10.0% |
| !! | AAAATGATTAATATTTGTAG+TGG | + | chr1.4:77749870-77749889 | None:intergenic | 15.0% |
| !! | TAATATAACAACTTATATTC+TGG | + | chr1.4:77751205-77751224 | None:intergenic | 15.0% |
| !! | TATATATATAAGGCTTAAAT+AGG | + | chr1.4:77750134-77750153 | None:intergenic | 15.0% |
| !! | TGATATTTATATAAAGTTTG+GGG | - | chr1.4:77751234-77751253 | MS.gene061143:intron | 15.0% |
| !! | TGTCAAAAAATATAAAAAGA+GGG | - | chr1.4:77751118-77751137 | MS.gene061143:intron | 15.0% |
| !! | TTAAATTGTAAACTTACTTA+GGG | + | chr1.4:77751990-77752009 | None:intergenic | 15.0% |
| !! | TTGTCAAAAAATATAAAAAG+AGG | - | chr1.4:77751117-77751136 | MS.gene061143:intron | 15.0% |
| !!! | TGTAAAAAAAAGTTTTTGTT+TGG | - | chr1.4:77751812-77751831 | MS.gene061143:intron | 15.0% |
| !!! | TTATGTTTTTGGATTTATTT+TGG | - | chr1.4:77751517-77751536 | MS.gene061143:intron | 15.0% |
| !!! | TTATTTTATAATTTGGTTGT+TGG | - | chr1.4:77751614-77751633 | MS.gene061143:intron | 15.0% |
| !!! | TTGAGACTTATTTTATAATT+TGG | - | chr1.4:77751607-77751626 | MS.gene061143:intron | 15.0% |
| !! | ACCATCAAATTAAAAATGTA+TGG | + | chr1.4:77750845-77750864 | None:intergenic | 20.0% |
| !! | ATACAAAAGTTGAAAAAACA+AGG | - | chr1.4:77750493-77750512 | MS.gene061143:intron | 20.0% |
| !! | ATATCAGTCAATATAAATGT+AGG | + | chr1.4:77749059-77749078 | None:intergenic | 20.0% |
| !! | ATATTTATATAAAGTTTGGG+GGG | - | chr1.4:77751236-77751255 | MS.gene061143:intron | 20.0% |
| !! | CAATGTTATAAACTATAAAC+TGG | - | chr1.4:77751006-77751025 | MS.gene061143:intron | 20.0% |
| !! | CTTAAATTGTAAACTTACTT+AGG | + | chr1.4:77751991-77752010 | None:intergenic | 20.0% |
| !! | GATATTTATATAAAGTTTGG+GGG | - | chr1.4:77751235-77751254 | MS.gene061143:intron | 20.0% |
| !! | GTTTATATATAGGCTTAAAT+AGG | - | chr1.4:77749777-77749796 | MS.gene061143:intron | 20.0% |
| !! | TAATAATGATAGAACTCAAT+CGG | + | chr1.4:77752387-77752406 | None:intergenic | 20.0% |
| !! | TTAGTTAATTATGCTAAACT+TGG | - | chr1.4:77749225-77749244 | MS.gene061143:intron | 20.0% |
| !!! | AAAAAAAAGTTTTTGTTTGG+TGG | - | chr1.4:77751815-77751834 | MS.gene061143:intron | 20.0% |
| !!! | AAAAAAAGTTTTTGTTTGGT+GGG | - | chr1.4:77751816-77751835 | MS.gene061143:intron | 20.0% |
| !!! | AATTGTTTTAGTAAGTTTAG+GGG | - | chr1.4:77750885-77750904 | MS.gene061143:intron | 20.0% |
| !!! | ACCATACATTTTTAATTTGA+TGG | - | chr1.4:77750841-77750860 | MS.gene061143:intron | 20.0% |
| !!! | AGCTTTTAGTTTTAACATTA+AGG | + | chr1.4:77748681-77748700 | None:intergenic | 20.0% |
| !!! | CATATTTTATACCAAAAAAG+TGG | + | chr1.4:77751091-77751110 | None:intergenic | 20.0% |
| !!! | GAATTGTTTTAGTAAGTTTA+GGG | - | chr1.4:77750884-77750903 | MS.gene061143:intron | 20.0% |
| !!! | GGTAAATCATTTCTATTTTA+TGG | - | chr1.4:77750264-77750283 | MS.gene061143:intron | 20.0% |
| !!! | GTTTGAAATAATGAAGAAAA+TGG | + | chr1.4:77749438-77749457 | None:intergenic | 20.0% |
| !!! | TAAAACTGATGACTTTTATT+TGG | - | chr1.4:77748905-77748924 | MS.gene061143:CDS | 20.0% |
| !!! | TAAATTTTTTGAGAAAGTTC+AGG | - | chr1.4:77752083-77752102 | MS.gene061143:CDS | 20.0% |
| !!! | TCAATTTTTATTGTTTTGCT+TGG | - | chr1.4:77750582-77750601 | MS.gene061143:CDS | 20.0% |
| !!! | TCTTCATTATTTCAAACTTT+TGG | - | chr1.4:77749441-77749460 | MS.gene061143:intron | 20.0% |
| !!! | TGAATTGTTTTAGTAAGTTT+AGG | - | chr1.4:77750883-77750902 | MS.gene061143:intron | 20.0% |
| !!! | TGAGTCTTATTTTATGTTTT+TGG | - | chr1.4:77751506-77751525 | MS.gene061143:intron | 20.0% |
| !!! | TGTTTCTTTAGAATTCATAT+TGG | - | chr1.4:77752506-77752525 | MS.gene061143:CDS | 20.0% |
| !!! | TTTCAACTTTTGTATTCTTA+TGG | + | chr1.4:77750488-77750507 | None:intergenic | 20.0% |
| ! | AAAAATTTATCATCTTCCTC+TGG | + | chr1.4:77752072-77752091 | None:intergenic | 25.0% |
| ! | AAAATTTATCATCTTCCTCT+GGG | + | chr1.4:77752071-77752090 | None:intergenic | 25.0% |
| ! | AATTTGTAGAGATGATTAGT+TGG | + | chr1.4:77749395-77749414 | None:intergenic | 25.0% |
| ! | AGATACTCTAATTCTTGTAA+AGG | - | chr1.4:77748292-77748311 | MS.gene061143:intron | 25.0% |
| ! | ATAATCTTTCAAATAGCCTT+TGG | + | chr1.4:77749097-77749116 | None:intergenic | 25.0% |
| ! | ATATTATTCCTGATAAAGAG+TGG | - | chr1.4:77749337-77749356 | MS.gene061143:intron | 25.0% |
| ! | CTCAACAAAAAAACATGATT+AGG | - | chr1.4:77750009-77750028 | MS.gene061143:intron | 25.0% |
| ! | GAGTTCTATCATTATTATCA+TGG | - | chr1.4:77752390-77752409 | MS.gene061143:CDS | 25.0% |
| ! | GATACTCTAATTCTTGTAAA+GGG | - | chr1.4:77748293-77748312 | MS.gene061143:intron | 25.0% |
| ! | GCATAATTAACTAATCAATC+AGG | + | chr1.4:77749219-77749238 | None:intergenic | 25.0% |
| ! | TAATATTTGTAGTGACAGTT+TGG | - | chr1.4:77750049-77750068 | MS.gene061143:intron | 25.0% |
| ! | TATTGAAAAAAAAGAGTCAG+AGG | - | chr1.4:77750221-77750240 | MS.gene061143:intron | 25.0% |
| ! | TGGCAAATGTTAATAATTAG+TGG | + | chr1.4:77749302-77749321 | None:intergenic | 25.0% |
| !! | AGAAGTACAAAAGATAAATG+TGG | + | chr1.4:77750631-77750650 | None:intergenic | 25.0% |
| !! | GTAAATTTTTGTACAAGTGA+TGG | - | chr1.4:77750243-77750262 | MS.gene061143:intron | 25.0% |
| !! | TAATGCTTTTGCATTTATCT+TGG | - | chr1.4:77751566-77751585 | MS.gene061143:intron | 25.0% |
| !! | TGTATTGCAAACTGATTTAA+CGG | + | chr1.4:77749572-77749591 | None:intergenic | 25.0% |
| !!! | AATATGCGCATTTTTTTGAA+TGG | + | chr1.4:77749322-77749341 | None:intergenic | 25.0% |
| !!! | CTAATCATGTTTTTTTGTTG+AGG | + | chr1.4:77750011-77750030 | None:intergenic | 25.0% |
| !!! | TTCTTTAGAATTCATATTGG+TGG | - | chr1.4:77752509-77752528 | MS.gene061143:CDS | 25.0% |
| !!! | TTGATAATTGTTTTTGCCAA+AGG | - | chr1.4:77749078-77749097 | MS.gene061143:intron | 25.0% |
| AAAAGATAAATGTGGCAACA+AGG | + | chr1.4:77750623-77750642 | None:intergenic | 30.0% | |
| AAAGATAAATGTGGCAACAA+GGG | + | chr1.4:77750622-77750641 | None:intergenic | 30.0% | |
| AACACAATGAGTGTTTATAC+TGG | + | chr1.4:77748455-77748474 | None:intergenic | 30.0% | |
| AAGATGATCAAAGAGAGTAA+AGG | - | chr1.4:77748536-77748555 | MS.gene061143:intron | 30.0% | |
| AAGTGAATAATTGTGACATG+AGG | - | chr1.4:77751040-77751059 | MS.gene061143:intron | 30.0% | |
| AATTATGCTAAACTTGGAGT+TGG | - | chr1.4:77749231-77749250 | MS.gene061143:intron | 30.0% | |
| AGACAATAGCTACAATAAAG+AGG | + | chr1.4:77748886-77748905 | None:intergenic | 30.0% | |
| AGATGATCAAAGAGAGTAAA+GGG | - | chr1.4:77748537-77748556 | MS.gene061143:intron | 30.0% | |
| AGTGAATAATTGTGACATGA+GGG | - | chr1.4:77751041-77751060 | MS.gene061143:intron | 30.0% | |
| ATAAAGTGCACAAGTCTAAA+CGG | - | chr1.4:77748777-77748796 | MS.gene061143:CDS | 30.0% | |
| ATAATCAAAATGCCAGACAT+TGG | + | chr1.4:77750747-77750766 | None:intergenic | 30.0% | |
| ATAGAACTCAATCGGTAAAT+TGG | + | chr1.4:77752379-77752398 | None:intergenic | 30.0% | |
| ATATTCTGTTCTATCTACCA+TGG | - | chr1.4:77750316-77750335 | MS.gene061143:intron | 30.0% | |
| ATCAGTAATCAAACGTGATT+AGG | + | chr1.4:77749902-77749921 | None:intergenic | 30.0% | |
| ATCTTGAAAAAAGTCAGACA+CGG | + | chr1.4:77749180-77749199 | None:intergenic | 30.0% | |
| ATCTTGAGTTTATTTATCGG+GGG | - | chr1.4:77750937-77750956 | MS.gene061143:intron | 30.0% | |
| ATTGTAAACTTACTTAGGGA+TGG | + | chr1.4:77751986-77752005 | None:intergenic | 30.0% | |
| CAATGATGAAAGTCAGATTA+AGG | - | chr1.4:77752233-77752252 | MS.gene061143:CDS | 30.0% | |
| CGGATCTTGAGTTTATTTAT+CGG | - | chr1.4:77750934-77750953 | MS.gene061143:intron | 30.0% | |
| GAAATGTATAGCTATATCCA+TGG | + | chr1.4:77750336-77750355 | None:intergenic | 30.0% | |
| GAATCGGAACTATGAATTTA+AGG | + | chr1.4:77750669-77750688 | None:intergenic | 30.0% | |
| GATCTTGAGTTTATTTATCG+GGG | - | chr1.4:77750936-77750955 | MS.gene061143:intron | 30.0% | |
| GGATCTTGAGTTTATTTATC+GGG | - | chr1.4:77750935-77750954 | MS.gene061143:intron | 30.0% | |
| GTATAAACACTCATTGTGTT+TGG | - | chr1.4:77748455-77748474 | MS.gene061143:intron | 30.0% | |
| TAAACTATAAACTGGTGTGA+TGG | - | chr1.4:77751014-77751033 | MS.gene061143:intron | 30.0% | |
| TAATATTTGTAGTGGCAGTT+TGG | + | chr1.4:77749862-77749881 | None:intergenic | 30.0% | |
| TAGTTTGATGTACTTTCTGT+AGG | - | chr1.4:77748492-77748511 | MS.gene061143:intron | 30.0% | |
| TTGAATTCGCTTTCTATAGT+TGG | - | chr1.4:77751357-77751376 | MS.gene061143:intron | 30.0% | |
| TTGAGGGACTAAAATTCAAA+TGG | - | chr1.4:77750085-77750104 | MS.gene061143:intron | 30.0% | |
| ! | GTTGCTTTGTTAAAAACTCT+AGG | - | chr1.4:77748927-77748946 | MS.gene061143:CDS | 30.0% |
| ! | TTTTCAGCTTAAATCTCTCT+CGG | - | chr1.4:77748390-77748409 | MS.gene061143:intron | 30.0% |
| !! | AAGTTTTATGAAGTGTCTAG+AGG | - | chr1.4:77748601-77748620 | MS.gene061143:intron | 30.0% |
| !!! | ATCATGTTTTTTTGTTGAGG+TGG | + | chr1.4:77750008-77750027 | None:intergenic | 30.0% |
| !!! | ATTTCCTTTTGTTTTGCCTT+TGG | - | chr1.4:77749701-77749720 | MS.gene061143:intron | 30.0% |
| !!! | GTCTGACTTTTTTCAAGATT+TGG | - | chr1.4:77749181-77749200 | MS.gene061143:intron | 30.0% |
| !!! | TTAATTTTTTACCTTCCTCC+CGG | + | chr1.4:77752713-77752732 | None:intergenic | 30.0% |
| !!! | TTTCCTTTTGTTTTGCCTTT+GGG | - | chr1.4:77749702-77749721 | MS.gene061143:intron | 30.0% |
| AAATTGAAACACGAGTCAAG+CGG | + | chr1.4:77751479-77751498 | None:intergenic | 35.0% | |
| AATCTCATGCAGGTTAGAAT+AGG | - | chr1.4:77752668-77752687 | MS.gene061143:intron | 35.0% | |
| AGTCTAAACGGAATAAACTC+TGG | - | chr1.4:77748789-77748808 | MS.gene061143:CDS | 35.0% | |
| ATAGGTTCAAGAAAAGGTTG+TGG | + | chr1.4:77748185-77748204 | None:intergenic | 35.0% | |
| ATCAAGTTCTTCAGAGTTCA+CGG | + | chr1.4:77750293-77750312 | None:intergenic | 35.0% | |
| ATCACGTTTGATTACTGATG+TGG | - | chr1.4:77749903-77749922 | MS.gene061143:intron | 35.0% | |
| ATGTACTTTCTGTAGGCAAA+AGG | - | chr1.4:77748499-77748518 | MS.gene061143:intron | 35.0% | |
| ATTTGATCAAATTGACCGAG+AGG | - | chr1.4:77748960-77748979 | MS.gene061143:CDS | 35.0% | |
| ATTTGTAGTGACAGTTTGGA+AGG | - | chr1.4:77750053-77750072 | MS.gene061143:intron | 35.0% | |
| CAAGGAAATTGCAAGTATCA+AGG | - | chr1.4:77749011-77749030 | MS.gene061143:intron | 35.0% | |
| CATAAACCTGCATTCAGAAT+CGG | + | chr1.4:77750685-77750704 | None:intergenic | 35.0% | |
| CCATGAGTTACATCTTCTAA+AGG | + | chr1.4:77748563-77748582 | None:intergenic | 35.0% | |
| CTAACCTGCATGAGATTATT+CGG | + | chr1.4:77752665-77752684 | None:intergenic | 35.0% | |
| CTTGATACTTGCAATTTCCT+TGG | + | chr1.4:77749013-77749032 | None:intergenic | 35.0% | |
| GAAGAAGAAATTAGAGTCTG+AGG | - | chr1.4:77749671-77749690 | MS.gene061143:intron | 35.0% | |
| GTGAATAATTGTGACATGAG+GGG | - | chr1.4:77751042-77751061 | MS.gene061143:intron | 35.0% | |
| GTGCACTTTATTCGTAAACT+TGG | + | chr1.4:77748768-77748787 | None:intergenic | 35.0% | |
| GTTAAAACTAAAAGCTCAGC+TGG | - | chr1.4:77748685-77748704 | MS.gene061143:CDS | 35.0% | |
| TATAGAAACCCAAGAAGCAA+TGG | - | chr1.4:77748637-77748656 | MS.gene061143:CDS | 35.0% | |
| TATGTAAGTTTCATACACGC+AGG | - | chr1.4:77752036-77752055 | MS.gene061143:intron | 35.0% | |
| TCAAATGGCCTATATTTGCA+GGG | - | chr1.4:77750100-77750119 | MS.gene061143:intron | 35.0% | |
| TCCAATGACCTATATTTGCA+GGG | + | chr1.4:77749811-77749830 | None:intergenic | 35.0% | |
| TCTGTCTGTATATCAGTAGA+AGG | + | chr1.4:77751167-77751186 | None:intergenic | 35.0% | |
| TCTTTAGTCCCTGCAAATAT+AGG | - | chr1.4:77749800-77749819 | MS.gene061143:intron | 35.0% | |
| TCTTTAGTCCCTGCAAATAT+AGG | + | chr1.4:77749819-77749800 | None:intergenic | 35.0% | |
| TGGCATCTAACCAACATTAA+GGG | - | chr1.4:77749923-77749942 | MS.gene061143:intron | 35.0% | |
| TTCAAATGGCCTATATTTGC+AGG | - | chr1.4:77750099-77750118 | MS.gene061143:intron | 35.0% | |
| TTCAACAACCATTGCTTCTT+GGG | + | chr1.4:77748648-77748667 | None:intergenic | 35.0% | |
| TTCCAATGACCTATATTTGC+AGG | + | chr1.4:77749812-77749831 | None:intergenic | 35.0% | |
| TTTCTTTCGAAAGTTTCCCT+TGG | + | chr1.4:77752212-77752231 | None:intergenic | 35.0% | |
| ! | AACTCTGGAGGAAGAAAAAA+AGG | - | chr1.4:77748804-77748823 | MS.gene061143:CDS | 35.0% |
| ! | ACGAAAGTCAAGTTCCTTTT+GGG | - | chr1.4:77748232-77748251 | MS.gene061143:intron | 35.0% |
| ! | CAACTTATATTCTGGTGTTG+CGG | + | chr1.4:77751197-77751216 | None:intergenic | 35.0% |
| ! | CCTTTAGAAGATGTAACTCA+TGG | - | chr1.4:77748560-77748579 | MS.gene061143:intron | 35.0% |
| ! | TCTGAAACATGTCTATATGC+AGG | - | chr1.4:77749605-77749624 | MS.gene061143:intron | 35.0% |
| ! | TGGAAGGATTAGTAAGTTCA+GGG | + | chr1.4:77749842-77749861 | None:intergenic | 35.0% |
| ! | TGGAAGGATTAGTAAGTTGA+GGG | - | chr1.4:77750069-77750088 | MS.gene061143:intron | 35.0% |
| ! | TTGGAAGGATTAGTAAGTTC+AGG | + | chr1.4:77749843-77749862 | None:intergenic | 35.0% |
| ! | TTGGAAGGATTAGTAAGTTG+AGG | - | chr1.4:77750068-77750087 | MS.gene061143:intron | 35.0% |
| !! | AATATAAAAAGAGGGTGCCA+TGG | - | chr1.4:77751126-77751145 | MS.gene061143:intron | 35.0% |
| !! | ATATAAAAAGAGGGTGCCAT+GGG | - | chr1.4:77751127-77751146 | MS.gene061143:intron | 35.0% |
| !! | CGTGCTGATTTATTATGTTC+AGG | - | chr1.4:77749516-77749535 | MS.gene061143:intron | 35.0% |
| !!! | TAGTTTTTTCTCCTTTGCCT+GGG | + | chr1.4:77749273-77749292 | None:intergenic | 35.0% |
| !!! | TCTGGCATTTTGATTATAGC+TGG | - | chr1.4:77750750-77750769 | MS.gene061143:intron | 35.0% |
| !!! | TGTTTTAGTAAGTTTAGGGG+TGG | - | chr1.4:77750888-77750907 | MS.gene061143:intron | 35.0% |
| !!! | TTAGTTTTTTCTCCTTTGCC+TGG | + | chr1.4:77749274-77749293 | None:intergenic | 35.0% |
| !!! | TTCCTTTTGTTTTGCCTTTG+GGG | - | chr1.4:77749703-77749722 | MS.gene061143:intron | 35.0% |
| AAAGAGTGGAGCTAGTTGAA+AGG | - | chr1.4:77749351-77749370 | MS.gene061143:intron | 40.0% | |
| AACCAACATTAAGGGCAAAG+AGG | - | chr1.4:77749931-77749950 | MS.gene061143:intron | 40.0% | |
| AACTAGCTCCACTCTTTATC+AGG | + | chr1.4:77749348-77749367 | None:intergenic | 40.0% | |
| AATTGAAACACGAGTCAAGC+GGG | + | chr1.4:77751478-77751497 | None:intergenic | 40.0% | |
| AGACCAGAAATGTCTGTGAT+CGG | - | chr1.4:77748255-77748274 | MS.gene061143:intron | 40.0% | |
| AGCTGCATAGGTTCAAGAAA+AGG | + | chr1.4:77748191-77748210 | None:intergenic | 40.0% | |
| AGTTGCATCTAATCCCTCTT+CGG | + | chr1.4:77752289-77752308 | None:intergenic | 40.0% | |
| ATAGTTCCGATTCTGAATGC+AGG | - | chr1.4:77750676-77750695 | MS.gene061143:intron | 40.0% | |
| ATTTGTAGTGGCAGTTTGGA+AGG | + | chr1.4:77749858-77749877 | None:intergenic | 40.0% | |
| CAAAAGGAACTTGACTTTCG+TGG | + | chr1.4:77748233-77748252 | None:intergenic | 40.0% | |
| CATGCAGGTTAGAATAGGAT+GGG | - | chr1.4:77752673-77752692 | MS.gene061143:intron | 40.0% | |
| CATGGAAGCAACAATGACAT+GGG | - | chr1.4:77752408-77752427 | MS.gene061143:CDS | 40.0% | |
| CGATTCTGAATGCAGGTTTA+TGG | - | chr1.4:77750683-77750702 | MS.gene061143:intron | 40.0% | |
| CTAAACGGAATAAACTCTGG+AGG | - | chr1.4:77748792-77748811 | MS.gene061143:CDS | 40.0% | |
| CTCGGTCACAAAATTTGACT+TGG | - | chr1.4:77751893-77751912 | MS.gene061143:intron | 40.0% | |
| CTTCAACAACCATTGCTTCT+TGG | + | chr1.4:77748649-77748668 | None:intergenic | 40.0% | |
| GGTAATATTGGAAGCTGCAT+AGG | + | chr1.4:77748203-77748222 | None:intergenic | 40.0% | |
| GTCAGATTAAGGAGAACAAC+AGG | - | chr1.4:77752244-77752263 | MS.gene061143:CDS | 40.0% | |
| GTGGCATCTAACCAACATTA+AGG | - | chr1.4:77749922-77749941 | MS.gene061143:intron | 40.0% | |
| TACCCCAAAGGCAAAACAAA+AGG | + | chr1.4:77749708-77749727 | None:intergenic | 40.0% | |
| TATGCTAAACTTGGAGTTGG+AGG | - | chr1.4:77749234-77749253 | MS.gene061143:intron | 40.0% | |
| TATTGCAGAAATGCTGGCAA+AGG | - | chr1.4:77748832-77748851 | MS.gene061143:CDS | 40.0% | |
| TCAATCGGTAAATTGGCCAA+AGG | + | chr1.4:77752372-77752391 | None:intergenic | 40.0% | |
| TCATCCGCAACATATCTGAA+TGG | + | chr1.4:77748713-77748732 | None:intergenic | 40.0% | |
| TCATGCAGGTTAGAATAGGA+TGG | - | chr1.4:77752672-77752691 | MS.gene061143:intron | 40.0% | |
| TCATGGAAGCAACAATGACA+TGG | - | chr1.4:77752407-77752426 | MS.gene061143:CDS | 40.0% | |
| TCCCTGCAAATATAGGTCAT+TGG | - | chr1.4:77749807-77749826 | MS.gene061143:intron | 40.0% | |
| TCTAGTAACATAGCATCCGA+AGG | - | chr1.4:77752321-77752340 | MS.gene061143:CDS | 40.0% | |
| TGAGATTATTCGGCAGTCAA+TGG | + | chr1.4:77752655-77752674 | None:intergenic | 40.0% | |
| TGGCTCGTCTCGTTAAAATA+CGG | - | chr1.4:77751377-77751396 | MS.gene061143:intron | 40.0% | |
| ! | AAATGTCTGTGATCGGTTCA+GGG | - | chr1.4:77748262-77748281 | MS.gene061143:intron | 40.0% |
| ! | CACGAAAGTCAAGTTCCTTT+TGG | - | chr1.4:77748231-77748250 | MS.gene061143:intron | 40.0% |
| ! | GCTGAAAAGCAACTTTTACG+TGG | + | chr1.4:77748378-77748397 | None:intergenic | 40.0% |
| ! | TGAGTTCAAGTTCCAATGTC+TGG | - | chr1.4:77750732-77750751 | MS.gene061143:intron | 40.0% |
| !! | AAAGTTTTTGTTTGGTGGGC+CGG | - | chr1.4:77751820-77751839 | MS.gene061143:intron | 40.0% |
| !! | TATAAAAAGAGGGTGCCATG+GGG | - | chr1.4:77751128-77751147 | MS.gene061143:intron | 40.0% |
| AATCTCCATAGAGGGAAACG+GGG | - | chr1.4:77749487-77749506 | MS.gene061143:intron | 45.0% | |
| ACCAAAAAAGTGGACCCAGT+GGG | + | chr1.4:77751081-77751100 | None:intergenic | 45.0% | |
| ACTCAACCCGCCAAAAATAG+CGG | + | chr1.4:77751330-77751349 | None:intergenic | 45.0% | |
| ACTGCCGAATAATCTCATGC+AGG | - | chr1.4:77752658-77752677 | MS.gene061143:intron | 45.0% | |
| ACTGTCTCCAATCTCCATAG+AGG | - | chr1.4:77749478-77749497 | MS.gene061143:intron | 45.0% | |
| AGATGCAATTGCAACTGCCA+AGG | - | chr1.4:77752164-77752183 | MS.gene061143:intron | 45.0% | |
| AGTAAAGCCATGCAGAACCA+AGG | - | chr1.4:77752192-77752211 | MS.gene061143:intron | 45.0% | |
| ATGGGAAGAGAAATCAGCAG+TGG | - | chr1.4:77748742-77748761 | MS.gene061143:CDS | 45.0% | |
| ATGGGATGCCTATATTCGAC+CGG | - | chr1.4:77752691-77752710 | MS.gene061143:intron | 45.0% | |
| CAATCTCCATAGAGGGAAAC+GGG | - | chr1.4:77749486-77749505 | MS.gene061143:intron | 45.0% | |
| CCAATCTCCATAGAGGGAAA+CGG | - | chr1.4:77749485-77749504 | MS.gene061143:intron | 45.0% | |
| CGAGATATGGGCATCTTACT+TGG | - | chr1.4:77752891-77752910 | MS.gene061143:CDS | 45.0% | |
| CTGTCTCCAATCTCCATAGA+GGG | - | chr1.4:77749479-77749498 | MS.gene061143:intron | 45.0% | |
| CTTACTTAGGGATGGCAAAG+CGG | + | chr1.4:77751978-77751997 | None:intergenic | 45.0% | |
| GAACCGATCACAGACATTTC+TGG | + | chr1.4:77748261-77748280 | None:intergenic | 45.0% | |
| GAACTTGACTTTCGTGGTTC+GGG | + | chr1.4:77748227-77748246 | None:intergenic | 45.0% | |
| GAAGCGTATTGCAGAAATGC+TGG | - | chr1.4:77748826-77748845 | MS.gene061143:CDS | 45.0% | |
| GACCTCTTTGCCCTTAATGT+TGG | + | chr1.4:77749936-77749955 | None:intergenic | 45.0% | |
| GCACAAAGTTGCAAGGAACA+CGG | + | chr1.4:77752827-77752846 | None:intergenic | 45.0% | |
| GCTCGTCTCGTTAAAATACG+GGG | - | chr1.4:77751379-77751398 | MS.gene061143:intron | 45.0% | |
| GGAACTTGACTTTCGTGGTT+CGG | + | chr1.4:77748228-77748247 | None:intergenic | 45.0% | |
| GGAGCCATTCAGATATGTTG+CGG | - | chr1.4:77748706-77748725 | MS.gene061143:CDS | 45.0% | |
| GGCTCGTCTCGTTAAAATAC+GGG | - | chr1.4:77751378-77751397 | MS.gene061143:intron | 45.0% | |
| GGTTCAAGAAAAGGTTGTGG+TGG | + | chr1.4:77748182-77748201 | None:intergenic | 45.0% | |
| GTAAAGCCATGCAGAACCAA+GGG | - | chr1.4:77752193-77752212 | MS.gene061143:intron | 45.0% | |
| GTAAGATGCCCATATCTCGT+TGG | + | chr1.4:77752890-77752909 | None:intergenic | 45.0% | |
| TACCAAAAAAGTGGACCCAG+TGG | + | chr1.4:77751082-77751101 | None:intergenic | 45.0% | |
| TCAAGAAAAGGTTGTGGTGG+CGG | + | chr1.4:77748179-77748198 | None:intergenic | 45.0% | |
| TGGAGGAGCTTATGATCCTT+TGG | - | chr1.4:77752353-77752372 | MS.gene061143:CDS | 45.0% | |
| TTAACTCGTTGGAAACGGGA+CGG | - | chr1.4:77751431-77751450 | MS.gene061143:intron | 45.0% | |
| TTACTTAGGGATGGCAAAGC+GGG | + | chr1.4:77751977-77751996 | None:intergenic | 45.0% | |
| ! | ATGAAGTGTCTAGAGGACAG+AGG | - | chr1.4:77748608-77748627 | MS.gene061143:intron | 45.0% |
| ! | ATTCGGCAGTCAATGGACTT+AGG | + | chr1.4:77752648-77752667 | None:intergenic | 45.0% |
| ! | CATCTTCCTCTGGGAGAAAA+TGG | + | chr1.4:77752062-77752081 | None:intergenic | 45.0% |
| ! | CATGGCTTTACTGGATTCCT+TGG | + | chr1.4:77752184-77752203 | None:intergenic | 45.0% |
| ! | GAAATGTCTGTGATCGGTTC+AGG | - | chr1.4:77748261-77748280 | MS.gene061143:intron | 45.0% |
| ! | TATGGGCATCTTACTTGGTG+AGG | - | chr1.4:77752896-77752915 | MS.gene061143:CDS | 45.0% |
| ! | TCCTCCATAGTTCTGTCCTT+CGG | + | chr1.4:77752340-77752359 | None:intergenic | 45.0% |
| ! | TGAAGTGTCTAGAGGACAGA+GGG | - | chr1.4:77748609-77748628 | MS.gene061143:intron | 45.0% |
| !! | AAGTTTCCCTTGGTTCTGCA+TGG | + | chr1.4:77752202-77752221 | None:intergenic | 45.0% |
| !! | ACTGCTGATTTCTCTTCCCA+TGG | + | chr1.4:77748743-77748762 | None:intergenic | 45.0% |
| !! | CTTATATTCTGGTGTTGCGG+CGG | + | chr1.4:77751194-77751213 | None:intergenic | 45.0% |
| !! | GACATTTCTGGTCTCCCAAA+AGG | + | chr1.4:77748249-77748268 | None:intergenic | 45.0% |
| !! | TCGTCTCGTCTCGTTTTTAG+CGG | - | chr1.4:77751917-77751936 | MS.gene061143:intron | 45.0% |
| !! | TTGGTTCTGCATGGCTTTAC+TGG | + | chr1.4:77752193-77752212 | None:intergenic | 45.0% |
| !!! | TCGTTTTTAGCGGGCTTAGA+CGG | - | chr1.4:77751927-77751946 | MS.gene061143:intron | 45.0% |
| !! | ATAATAATAATAAAAAAAAG+TGG | + | chr1.4:77752605-77752624 | None:intergenic | 5.0% |
| !!! | ACTTTTTTTTATTATTATTA+TGG | - | chr1.4:77752604-77752623 | MS.gene061143:intron | 5.0% |
| !!! | CTTTTTTTTATTATTATTAT+GGG | - | chr1.4:77752605-77752624 | MS.gene061143:intron | 5.0% |
| AAACTCAAGATCCGCCACTG+AGG | + | chr1.4:77750928-77750947 | None:intergenic | 50.0% | |
| AAACTTGGAGTTGGAGGTCC+TGG | - | chr1.4:77749240-77749259 | MS.gene061143:intron | 50.0% | |
| AACTTGGAGTTGGAGGTCCT+GGG | - | chr1.4:77749241-77749260 | MS.gene061143:intron | 50.0% | |
| ACTTTGTGCAGTCGCATACC+AGG | - | chr1.4:77752838-77752857 | MS.gene061143:CDS | 50.0% | |
| AGGTGGAGTCATTAACGACG+TGG | + | chr1.4:77749991-77750010 | None:intergenic | 50.0% | |
| AGTCCATAGTGTAGCCGAAG+AGG | - | chr1.4:77752272-77752291 | MS.gene061143:CDS | 50.0% | |
| ATCCCTCTTCGGCTACACTA+TGG | + | chr1.4:77752278-77752297 | None:intergenic | 50.0% | |
| CAAAACGAGTCTGACCTCAG+TGG | - | chr1.4:77750911-77750930 | MS.gene061143:intron | 50.0% | |
| CCAAAAAAGTGGACCCAGTG+GGG | + | chr1.4:77751080-77751099 | None:intergenic | 50.0% | |
| CCCGCTTAACTCGTTGGAAA+CGG | - | chr1.4:77751426-77751445 | MS.gene061143:CDS | 50.0% | |
| CCCGTTTCCAACGAGTTAAG+CGG | + | chr1.4:77751430-77751449 | None:intergenic | 50.0% | |
| CCGCTTAACTCGTTGGAAAC+GGG | - | chr1.4:77751427-77751446 | MS.gene061143:CDS | 50.0% | |
| CCGTTTCCAACGAGTTAAGC+GGG | + | chr1.4:77751429-77751448 | None:intergenic | 50.0% | |
| CCGTTTCCCTCTATGGAGAT+TGG | + | chr1.4:77749488-77749507 | None:intergenic | 50.0% | |
| CGTCTCGTTAAAATACGGGG+CGG | - | chr1.4:77751382-77751401 | MS.gene061143:CDS | 50.0% | |
| CTCAACCCGCCAAAAATAGC+GGG | + | chr1.4:77751329-77751348 | None:intergenic | 50.0% | |
| GCATCCGAAGGACAGAACTA+TGG | - | chr1.4:77752333-77752352 | MS.gene061143:CDS | 50.0% | |
| GGTGCAGACTGAAAAGGAAC+TGG | + | chr1.4:77748152-77748171 | None:intergenic | 50.0% | |
| GTCCATAGTGTAGCCGAAGA+GGG | - | chr1.4:77752273-77752292 | MS.gene061143:CDS | 50.0% | |
| GTTAAAATACGGGGCGGACA+CGG | - | chr1.4:77751388-77751407 | MS.gene061143:CDS | 50.0% | |
| TAACTCGTTGGAAACGGGAC+GGG | - | chr1.4:77751432-77751451 | MS.gene061143:intron | 50.0% | |
| TCCGAAGGACAGAACTATGG+AGG | - | chr1.4:77752336-77752355 | MS.gene061143:CDS | 50.0% | |
| TCCTCCAGCCAACGAGATAT+GGG | - | chr1.4:77752879-77752898 | MS.gene061143:CDS | 50.0% | |
| TGACATGGGCACATTGATCG+AGG | - | chr1.4:77752422-77752441 | MS.gene061143:CDS | 50.0% | |
| TGCGACTGCACAAAGTTGCA+AGG | + | chr1.4:77752834-77752853 | None:intergenic | 50.0% | |
| TGCGGATGAAGCAAGTCCAT+GGG | - | chr1.4:77748724-77748743 | MS.gene061143:CDS | 50.0% | |
| TGGGATGCCTATATTCGACC+GGG | - | chr1.4:77752692-77752711 | MS.gene061143:intron | 50.0% | |
| TTAAAATACGGGGCGGACAC+GGG | - | chr1.4:77751389-77751408 | MS.gene061143:CDS | 50.0% | |
| TTAGACGGGCGAGCCTAAAT+GGG | - | chr1.4:77751942-77751961 | MS.gene061143:intron | 50.0% | |
| TTCACGCTCCTCTTCTTCCA+CGG | + | chr1.4:77752112-77752131 | None:intergenic | 50.0% | |
| TTGACCGAGAGGCTGATGAA+TGG | - | chr1.4:77748971-77748990 | MS.gene061143:CDS | 50.0% | |
| TTGCGGATGAAGCAAGTCCA+TGG | - | chr1.4:77748723-77748742 | MS.gene061143:CDS | 50.0% | |
| ! | AAAGTACCCTGCTACCCCAA+AGG | + | chr1.4:77749720-77749739 | None:intergenic | 50.0% |
| ! | AATTGTGACATGAGGGGCAC+CGG | - | chr1.4:77751048-77751067 | MS.gene061143:intron | 50.0% |
| ! | ACAGCTCGAGTTGCTCTTGA+TGG | - | chr1.4:77750438-77750457 | MS.gene061143:intron | 50.0% |
| ! | AGAAGAGGAGCGTGAAGCTT+TGG | - | chr1.4:77752116-77752135 | MS.gene061143:intron | 50.0% |
| ! | ATAAAGTTTGGGGGGTGCAG+TGG | - | chr1.4:77751244-77751263 | MS.gene061143:intron | 50.0% |
| ! | CGTGGTTCGGGTGGTAATAT+TGG | + | chr1.4:77748215-77748234 | None:intergenic | 50.0% |
| ! | GAAGTGTCTAGAGGACAGAG+GGG | - | chr1.4:77748610-77748629 | MS.gene061143:intron | 50.0% |
| !! | CCAAAAATAGCGGGCCAAAC+GGG | + | chr1.4:77751320-77751339 | None:intergenic | 50.0% |
| !! | GCCAAAAATAGCGGGCCAAA+CGG | + | chr1.4:77751321-77751340 | None:intergenic | 50.0% |
| !! | TTGGGGTAGCAGGGTACTTT+TGG | - | chr1.4:77749720-77749739 | MS.gene061143:intron | 50.0% |
| !!! | CGTCTCGTCTCGTTTTTAGC+GGG | - | chr1.4:77751918-77751937 | MS.gene061143:intron | 50.0% |
| !!! | CGTTTTTAGCGGGCTTAGAC+GGG | - | chr1.4:77751928-77751947 | MS.gene061143:intron | 50.0% |
| !!! | GTTTGGCCCGCTATTTTTGG+CGG | - | chr1.4:77751320-77751339 | MS.gene061143:intron | 50.0% |
| !!! | GTTTTGCCTTTGGGGTAGCA+GGG | - | chr1.4:77749711-77749730 | MS.gene061143:intron | 50.0% |
| !!! | TGTTTTGCCTTTGGGGTAGC+AGG | - | chr1.4:77749710-77749729 | MS.gene061143:intron | 50.0% |
| !!! | TTTGGCCCGCTATTTTTGGC+GGG | - | chr1.4:77751321-77751340 | MS.gene061143:intron | 50.0% |
| AACGAGTCTGACCTCAGTGG+CGG | - | chr1.4:77750914-77750933 | MS.gene061143:intron | 55.0% | |
| AAGCACGCCACTAAACGAGG+CGG | - | chr1.4:77751856-77751875 | MS.gene061143:intron | 55.0% | |
| ACCGAGAGGCTGATGAATGG+AGG | - | chr1.4:77748974-77748993 | MS.gene061143:CDS | 55.0% | |
| AGGCTGATGAATGGAGGGCT+AGG | - | chr1.4:77748980-77748999 | MS.gene061143:CDS | 55.0% | |
| CAGTCGCATACCAGGACACT+GGG | - | chr1.4:77752846-77752865 | MS.gene061143:CDS | 55.0% | |
| CCATAGAGGGAAACGGGGAA+GGG | - | chr1.4:77749492-77749511 | MS.gene061143:intron | 55.0% | |
| CCCTCCATTCATCAGCCTCT+CGG | + | chr1.4:77748978-77748997 | None:intergenic | 55.0% | |
| CCGAGAGGCTGATGAATGGA+GGG | - | chr1.4:77748975-77748994 | MS.gene061143:CDS | 55.0% | |
| CCTATATTCGACCGGGAGGA+AGG | - | chr1.4:77752699-77752718 | MS.gene061143:intron | 55.0% | |
| CCTTCCTCCCGGTCGAATAT+AGG | + | chr1.4:77752702-77752721 | None:intergenic | 55.0% | |
| CTCCTCCAGCCAACGAGATA+TGG | - | chr1.4:77752878-77752897 | MS.gene061143:CDS | 55.0% | |
| CTTAGACGGGCGAGCCTAAA+TGG | - | chr1.4:77751941-77751960 | MS.gene061143:intron | 55.0% | |
| GATGCCCATATCTCGTTGGC+TGG | + | chr1.4:77752886-77752905 | None:intergenic | 55.0% | |
| GATGCCTATATTCGACCGGG+AGG | - | chr1.4:77752695-77752714 | MS.gene061143:intron | 55.0% | |
| GGCTGATGAATGGAGGGCTA+GGG | - | chr1.4:77748981-77749000 | MS.gene061143:CDS | 55.0% | |
| TAAAATACGGGGCGGACACG+GGG | - | chr1.4:77751390-77751409 | MS.gene061143:CDS | 55.0% | |
| TAGACGGGCGAGCCTAAATG+GGG | - | chr1.4:77751943-77751962 | MS.gene061143:intron | 55.0% | |
| TCCATAGAGGGAAACGGGGA+AGG | - | chr1.4:77749491-77749510 | MS.gene061143:intron | 55.0% | |
| TGAGAAAGTTCAGGCTGCCG+TGG | - | chr1.4:77752092-77752111 | MS.gene061143:CDS | 55.0% | |
| TGGCACGTAACTGTGCACGA+AGG | - | chr1.4:77752529-77752548 | MS.gene061143:CDS | 55.0% | |
| TTAGTGGCGTGCTTGCGAGT+TGG | + | chr1.4:77751850-77751869 | None:intergenic | 55.0% | |
| TTCCAACGAGTTAAGCGGGC+CGG | + | chr1.4:77751425-77751444 | None:intergenic | 55.0% | |
| ! | AACGAGGCGGGGTGAGATTT+TGG | - | chr1.4:77751869-77751888 | MS.gene061143:intron | 55.0% |
| ! | CATATCTCGTTGGCTGGAGG+AGG | + | chr1.4:77752880-77752899 | None:intergenic | 55.0% |
| ! | CTTGACTTTCGTGGTTCGGG+TGG | + | chr1.4:77748224-77748243 | None:intergenic | 55.0% |
| ! | GCGGGGTGAGATTTTGGACT+CGG | - | chr1.4:77751875-77751894 | MS.gene061143:intron | 55.0% |
| ! | GCTCGAGTTGCTCTTGATGG+AGG | - | chr1.4:77750441-77750460 | MS.gene061143:intron | 55.0% |
| ! | GGATCTCTTTAGAGACCCCC+AGG | + | chr1.4:77751272-77751291 | None:intergenic | 55.0% |
| ! | GGCAGAGGTGCAGACTGAAA+AGG | + | chr1.4:77748158-77748177 | None:intergenic | 55.0% |
| !! | AAATAGCGGGCCAAACGGGT+CGG | + | chr1.4:77751316-77751335 | None:intergenic | 55.0% |
| !! | CCCGTTTGGCCCGCTATTTT+TGG | - | chr1.4:77751317-77751336 | MS.gene061143:intron | 55.0% |
| !!! | CCCCACTGGGTCCACTTTTT+TGG | - | chr1.4:77751077-77751096 | MS.gene061143:intron | 55.0% |
| AGCACGCCACTAAACGAGGC+GGG | - | chr1.4:77751857-77751876 | MS.gene061143:intron | 60.0% | |
| CCCTTCCCCGTTTCCCTCTA+TGG | + | chr1.4:77749495-77749514 | None:intergenic | 60.0% | |
| CGCAAGCACGCCACTAAACG+AGG | - | chr1.4:77751853-77751872 | MS.gene061143:intron | 60.0% | |
| CTGGGTTCGAACCCAGGCAA+AGG | - | chr1.4:77749259-77749278 | MS.gene061143:intron | 60.0% | |
| CTTTGCCTGGGTTCGAACCC+AGG | + | chr1.4:77749261-77749280 | None:intergenic | 60.0% | |
| GAGGGCTAGGGAGATTGCCA+AGG | - | chr1.4:77748993-77749012 | MS.gene061143:CDS | 60.0% | |
| GCAGTCGCATACCAGGACAC+TGG | - | chr1.4:77752845-77752864 | MS.gene061143:CDS | 60.0% | |
| GGACCCAGTGGGGTTTGAAC+CGG | + | chr1.4:77751070-77751089 | None:intergenic | 60.0% | |
| TCAGGCTGCCGTGGAAGAAG+AGG | - | chr1.4:77752101-77752120 | MS.gene061143:CDS | 60.0% | |
| TCTCACCCCGCCTCGTTTAG+TGG | + | chr1.4:77751866-77751885 | None:intergenic | 60.0% | |
| TTAGGGATGGCAAAGCGGGC+CGG | + | chr1.4:77751973-77751992 | None:intergenic | 60.0% | |
| ! | ATCTCGTTGGCTGGAGGAGG+AGG | + | chr1.4:77752877-77752896 | None:intergenic | 60.0% |
| ! | GCCCATATCTCGTTGGCTGG+AGG | + | chr1.4:77752883-77752902 | None:intergenic | 60.0% |
| !! | AAAGGTTGTGGTGGCGGCAG+AGG | + | chr1.4:77748173-77748192 | None:intergenic | 60.0% |
| !! | CGCAGGCCATTTTCTCCCAG+AGG | - | chr1.4:77752053-77752072 | MS.gene061143:CDS | 60.0% |
| !! | GCACCGGTTCAAACCCCACT+GGG | - | chr1.4:77751064-77751083 | MS.gene061143:intron | 60.0% |
| ACGGGCGAGCCTAAATGGGG+CGG | - | chr1.4:77751946-77751965 | MS.gene061143:intron | 65.0% | |
| AGCCGGCCCGCTTAACTCGT+TGG | - | chr1.4:77751420-77751439 | MS.gene061143:CDS | 65.0% | |
| CGTTGGAAACGGGACGGGCA+CGG | - | chr1.4:77751437-77751456 | MS.gene061143:intron | 65.0% | |
| GAGGTCCTGGGTTCGAACCC+AGG | - | chr1.4:77749253-77749272 | MS.gene061143:intron | 65.0% | |
| GCACGCCACTAAACGAGGCG+GGG | - | chr1.4:77751858-77751877 | MS.gene061143:intron | 65.0% | |
| GGAGGCTGAACCCAGTGTCC+TGG | + | chr1.4:77752859-77752878 | None:intergenic | 65.0% | |
| GGTCGCGTGTTCGAACCCCA+TGG | + | chr1.4:77751146-77751165 | None:intergenic | 65.0% | |
| GTTGGAAACGGGACGGGCAC+GGG | - | chr1.4:77751438-77751457 | MS.gene061143:intron | 65.0% | |
| TTGGAAACGGGACGGGCACG+GGG | - | chr1.4:77751439-77751458 | MS.gene061143:intron | 65.0% | |
| ! | GTGGCGTGCTTGCGAGTTGG+CGG | + | chr1.4:77751847-77751866 | None:intergenic | 65.0% |
| ! | TGGCGTGCTTGCGAGTTGGC+GGG | + | chr1.4:77751846-77751865 | None:intergenic | 65.0% |
| !! | GGCACCGGTTCAAACCCCAC+TGG | - | chr1.4:77751063-77751082 | MS.gene061143:intron | 65.0% |
| AATACGGGGCGGACACGGGG+CGG | - | chr1.4:77751393-77751412 | MS.gene061143:CDS | 70.0% | |
| CGAGCCTAAATGGGGCGGGC+CGG | - | chr1.4:77751951-77751970 | MS.gene061143:intron | 70.0% | |
| CGGGCGAGCCTAAATGGGGC+GGG | - | chr1.4:77751947-77751966 | MS.gene061143:intron | 70.0% | |
| TCCGCCCCTGTCTGACCCAC+CGG | - | chr1.4:77751289-77751308 | MS.gene061143:intron | 70.0% | |
| TCGGCCCGGTGGGTCAGACA+GGG | + | chr1.4:77751297-77751316 | None:intergenic | 70.0% | |
| ! | GTGCTTGCGAGTTGGCGGGC+CGG | + | chr1.4:77751842-77751861 | None:intergenic | 70.0% |
| ! | TGGGGGGTGCAGTGGCACCT+GGG | - | chr1.4:77751252-77751271 | MS.gene061143:intron | 70.0% |
| ! | TTGGGGGGTGCAGTGGCACC+TGG | - | chr1.4:77751251-77751270 | MS.gene061143:intron | 70.0% |
| ACCCACCGGGCCGACCCGTT+TGG | - | chr1.4:77751303-77751322 | MS.gene061143:intron | 75.0% | |
| ATACGGGGCGGACACGGGGC+GGG | - | chr1.4:77751394-77751413 | MS.gene061143:CDS | 75.0% | |
| CCCGGTGGGTCAGACAGGGG+CGG | + | chr1.4:77751293-77751312 | None:intergenic | 75.0% | |
| CCGCCCCTGTCTGACCCACC+GGG | - | chr1.4:77751290-77751309 | MS.gene061143:intron | 75.0% | |
| CGGCCCGGTGGGTCAGACAG+GGG | + | chr1.4:77751296-77751315 | None:intergenic | 75.0% | |
| GCCAAACGGGTCGGCCCGGT+GGG | + | chr1.4:77751307-77751326 | None:intergenic | 75.0% | |
| GTCGGCCCGGTGGGTCAGAC+AGG | + | chr1.4:77751298-77751317 | None:intergenic | 75.0% | |
| ! | GGGGGGTGCAGTGGCACCTG+GGG | - | chr1.4:77751253-77751272 | MS.gene061143:intron | 75.0% |
| ! | GGGGGTGCAGTGGCACCTGG+GGG | - | chr1.4:77751254-77751273 | MS.gene061143:intron | 75.0% |
| ! | AACGGGACGGGCACGGGGCG+TGG | - | chr1.4:77751444-77751463 | MS.gene061143:intron | 80.0% |
| ! | CGGGCCGGCCCGCCCCATTT+AGG | + | chr1.4:77751958-77751977 | None:intergenic | 80.0% |
| ! | GCGGGCCAAACGGGTCGGCC+CGG | + | chr1.4:77751311-77751330 | None:intergenic | 80.0% |
| ! | GGCCAAACGGGTCGGCCCGG+TGG | + | chr1.4:77751308-77751327 | None:intergenic | 80.0% |
| ! | TACGGGGCGGACACGGGGCG+GGG | - | chr1.4:77751395-77751414 | MS.gene061143:CDS | 80.0% |
| ! | GACGGGCACGGGGCGTGGCG+GGG | - | chr1.4:77751449-77751468 | MS.gene061143:intron | 85.0% |
| ! | GGACACGGGGCGGGGCGAGC+CGG | - | chr1.4:77751403-77751422 | MS.gene061143:CDS | 85.0% |
| ! | GGACGGGCACGGGGCGTGGC+GGG | - | chr1.4:77751448-77751467 | MS.gene061143:intron | 85.0% |
| ! | GGGACGGGCACGGGGCGTGG+CGG | - | chr1.4:77751447-77751466 | MS.gene061143:intron | 85.0% |
| !! | GGGCACGGGGCGTGGCGGGG+CGG | - | chr1.4:77751452-77751471 | MS.gene061143:intron | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 77748143 | 77752930 | 77748143 | ID=MS.gene061143 |
| chr1.4 | mRNA | 77748143 | 77752930 | 77748143 | ID=MS.gene061143.t1;Parent=MS.gene061143 |
| chr1.4 | exon | 77752755 | 77752930 | 77752755 | ID=MS.gene061143.t1.exon1;Parent=MS.gene061143.t1 |
| chr1.4 | CDS | 77752755 | 77752930 | 77752755 | ID=cds.MS.gene061143.t1;Parent=MS.gene061143.t1 |
| chr1.4 | exon | 77752220 | 77752559 | 77752220 | ID=MS.gene061143.t1.exon2;Parent=MS.gene061143.t1 |
| chr1.4 | CDS | 77752220 | 77752559 | 77752220 | ID=cds.MS.gene061143.t1;Parent=MS.gene061143.t1 |
| chr1.4 | exon | 77752041 | 77752124 | 77752041 | ID=MS.gene061143.t1.exon3;Parent=MS.gene061143.t1 |
| chr1.4 | CDS | 77752041 | 77752124 | 77752041 | ID=cds.MS.gene061143.t1;Parent=MS.gene061143.t1 |
| chr1.4 | exon | 77751381 | 77751446 | 77751381 | ID=MS.gene061143.t1.exon4;Parent=MS.gene061143.t1 |
| chr1.4 | CDS | 77751381 | 77751446 | 77751381 | ID=cds.MS.gene061143.t1;Parent=MS.gene061143.t1 |
| chr1.4 | exon | 77750559 | 77750631 | 77750559 | ID=MS.gene061143.t1.exon5;Parent=MS.gene061143.t1 |
| chr1.4 | CDS | 77750559 | 77750631 | 77750559 | ID=cds.MS.gene061143.t1;Parent=MS.gene061143.t1 |
| chr1.4 | exon | 77748630 | 77749015 | 77748630 | ID=MS.gene061143.t1.exon6;Parent=MS.gene061143.t1 |
| chr1.4 | CDS | 77748630 | 77749015 | 77748630 | ID=cds.MS.gene061143.t1;Parent=MS.gene061143.t1 |
| chr1.4 | exon | 77748353 | 77748393 | 77748353 | ID=MS.gene061143.t1.exon7;Parent=MS.gene061143.t1 |
| chr1.4 | CDS | 77748353 | 77748393 | 77748353 | ID=cds.MS.gene061143.t1;Parent=MS.gene061143.t1 |
| chr1.4 | exon | 77748143 | 77748224 | 77748143 | ID=MS.gene061143.t1.exon8;Parent=MS.gene061143.t1 |
| chr1.4 | CDS | 77748143 | 77748224 | 77748143 | ID=cds.MS.gene061143.t1;Parent=MS.gene061143.t1 |
| Gene Sequence |
| Protein sequence |
