Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061221.t1 | XP_013458343.1 | 97.2 | 642 | 18 | 0 | 1 | 642 | 1 | 642 | 0.00E+00 | 1264.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061221.t1 | Q9ASW1 | 56.3 | 595 | 241 | 5 | 52 | 642 | 40 | 619 | 3.8e-191 | 669.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061221.t1 | A0A072URG8 | 97.2 | 642 | 18 | 0 | 1 | 642 | 1 | 642 | 0.0e+00 | 1264.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene061221 | MS.gene26807 | 0.957085 | 6.34E-115 | -1.69E-46 |
| MS.gene061221 | MS.gene68606 | 0.991251 | 1.15E-186 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene064542 | MS.gene061221 | PPI |
| MS.gene061221 | MS.gene73119 | PPI |
| MS.gene035805 | MS.gene061221 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061221.t1 | MTR_4g123090 | 97.196 | 642 | 18 | 0 | 1 | 642 | 1 | 642 | 0.0 | 1300 |
| MS.gene061221.t1 | MTR_5g041210 | 49.614 | 647 | 307 | 8 | 1 | 641 | 1 | 634 | 0.0 | 619 |
| MS.gene061221.t1 | MTR_5g041210 | 49.459 | 647 | 306 | 9 | 1 | 641 | 1 | 632 | 0.0 | 611 |
| MS.gene061221.t1 | MTR_2g018770 | 36.460 | 565 | 316 | 12 | 110 | 641 | 132 | 686 | 1.03e-111 | 351 |
| MS.gene061221.t1 | MTR_4g107360 | 37.477 | 539 | 304 | 15 | 120 | 641 | 90 | 612 | 4.69e-110 | 344 |
| MS.gene061221.t1 | MTR_5g037300 | 35.907 | 557 | 319 | 14 | 116 | 641 | 91 | 640 | 3.37e-106 | 335 |
| MS.gene061221.t1 | MTR_8g061960 | 34.532 | 556 | 322 | 15 | 116 | 641 | 106 | 649 | 1.03e-101 | 323 |
| MS.gene061221.t1 | MTR_2g018770 | 34.396 | 439 | 249 | 9 | 110 | 516 | 132 | 563 | 8.05e-68 | 233 |
| MS.gene061221.t1 | MTR_8g463930 | 25.954 | 262 | 173 | 9 | 391 | 641 | 80 | 331 | 5.10e-12 | 68.2 |
| MS.gene061221.t1 | MTR_2g078030 | 25.670 | 261 | 175 | 9 | 391 | 641 | 74 | 325 | 5.80e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061221.t1 | AT3G06440 | 53.715 | 646 | 250 | 8 | 1 | 642 | 19 | 619 | 0.0 | 686 |
| MS.gene061221.t1 | AT3G06440 | 51.008 | 645 | 240 | 9 | 1 | 642 | 19 | 590 | 0.0 | 633 |
| MS.gene061221.t1 | AT1G26810 | 47.005 | 651 | 324 | 7 | 1 | 641 | 1 | 640 | 0.0 | 582 |
| MS.gene061221.t1 | AT1G26810 | 47.005 | 651 | 324 | 7 | 1 | 641 | 1 | 640 | 0.0 | 582 |
| MS.gene061221.t1 | AT5G62620 | 38.372 | 516 | 280 | 10 | 157 | 641 | 170 | 678 | 1.06e-112 | 353 |
| MS.gene061221.t1 | AT1G74800 | 37.024 | 551 | 316 | 13 | 113 | 641 | 128 | 669 | 2.93e-110 | 347 |
| MS.gene061221.t1 | AT1G27120 | 36.502 | 526 | 301 | 11 | 139 | 641 | 124 | 639 | 2.26e-107 | 338 |
| MS.gene061221.t1 | AT1G27120 | 36.742 | 528 | 297 | 11 | 139 | 641 | 155 | 670 | 3.37e-107 | 338 |
| MS.gene061221.t1 | AT4G21060 | 35.110 | 544 | 315 | 13 | 128 | 641 | 146 | 681 | 6.61e-102 | 325 |
| MS.gene061221.t1 | AT4G21060 | 35.110 | 544 | 315 | 13 | 128 | 641 | 203 | 738 | 2.21e-101 | 325 |
| MS.gene061221.t1 | AT5G62620 | 36.080 | 449 | 249 | 10 | 157 | 574 | 170 | 611 | 3.24e-81 | 269 |
| MS.gene061221.t1 | AT2G26100 | 26.641 | 259 | 175 | 6 | 391 | 641 | 107 | 358 | 1.66e-16 | 82.4 |
| MS.gene061221.t1 | AT3G14960 | 27.969 | 261 | 173 | 7 | 389 | 641 | 79 | 332 | 3.50e-16 | 80.9 |
| MS.gene061221.t1 | AT1G53290 | 26.899 | 316 | 195 | 11 | 352 | 641 | 29 | 334 | 1.91e-15 | 78.6 |
| MS.gene061221.t1 | AT2G26100 | 26.106 | 226 | 155 | 3 | 391 | 610 | 107 | 326 | 2.16e-15 | 78.6 |
Find 123 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACAATTGCAATTTGCATTT+TGG | 0.096764 | 8.3:+5767309 | MS.gene061221:CDS |
| AATACATGGACTAGTGATTT+TGG | 0.137369 | 8.3:+5765921 | MS.gene061221:CDS |
| TTTCTACTGTACAGTCTTAA+AGG | 0.188302 | 8.3:+5765255 | MS.gene061221:CDS |
| AATCAACAAAAGGCATTAAT+TGG | 0.212309 | 8.3:-5767264 | None:intergenic |
| TTTAACTCCTTGAGCTATTT+CGG | 0.214747 | 8.3:-5765559 | None:intergenic |
| TGCAAGATAATTGGAGGATT+TGG | 0.247383 | 8.3:-5765843 | None:intergenic |
| AAAGGATTAGCCTCAGAAAA+AGG | 0.248836 | 8.3:-5766481 | None:intergenic |
| GCATATGGATTGAACAATTT+AGG | 0.250872 | 8.3:+5768599 | MS.gene061221:CDS |
| TTAACTCCTTGAGCTATTTC+GGG | 0.251324 | 8.3:-5765558 | None:intergenic |
| TTTAAGTCTGTTATCAGTTC+TGG | 0.251836 | 8.3:+5766712 | MS.gene061221:CDS |
| ATAGAGTTAATCTTGAATTA+TGG | 0.276791 | 8.3:+5767215 | MS.gene061221:CDS |
| ATAGCAAAATTCGTTGTCTT+TGG | 0.279953 | 8.3:+5767841 | MS.gene061221:CDS |
| GATATCTACTCACAACATTC+TGG | 0.289356 | 8.3:-5768760 | None:intergenic |
| CATTATAATGTGAGTCTTCC+TGG | 0.290225 | 8.3:+5765864 | MS.gene061221:CDS |
| ACATTATAATGCAAGATAAT+TGG | 0.291182 | 8.3:-5765852 | None:intergenic |
| GGATTTCATATGACTGTAAA+TGG | 0.300607 | 8.3:+5766532 | MS.gene061221:CDS |
| CTTCAGATGGCTTCCCTTTG+AGG | 0.308752 | 8.3:-5767567 | None:intergenic |
| TACCTAAAGCCATGATAAAA+AGG | 0.316882 | 8.3:-5765224 | None:intergenic |
| TAGGGATAGCTGGAGCCTTC+AGG | 0.328328 | 8.3:-5766787 | None:intergenic |
| CAATGAATGTTGTACTTGTT+TGG | 0.333423 | 8.3:+5765496 | MS.gene061221:CDS |
| TGTCATTGTCTTGCCAAGTT+TGG | 0.340771 | 8.3:-5765691 | None:intergenic |
| CAAGGATGGTGTTATGCCTT+TGG | 0.341498 | 8.3:+5768713 | MS.gene061221:CDS |
| TCGGCGCTCAAAGTTATTTC+CGG | 0.341737 | 8.3:-5766846 | None:intergenic |
| CTCCAGCTATCCCTAGAAAA+AGG | 0.342285 | 8.3:+5766795 | MS.gene061221:CDS |
| CTTCTAAGTCATCTCCTGAT+AGG | 0.344437 | 8.3:+5767611 | MS.gene061221:CDS |
| TCACTGCCACATTGTGGGTT+GGG | 0.361190 | 8.3:+5766503 | MS.gene061221:CDS |
| ATATCATTATCTTCCGTAAC+AGG | 0.362656 | 8.3:-5766746 | None:intergenic |
| TTGCTGTCCTTATCCCTATC+AGG | 0.368376 | 8.3:-5767625 | None:intergenic |
| ACTGGATCTCCCTTGTGGTT+TGG | 0.371403 | 8.3:+5765728 | MS.gene061221:CDS |
| TTTCGATGCAGATCAGAAAA+TGG | 0.377851 | 8.3:+5765389 | MS.gene061221:CDS |
| CCAAGTTTGGTCACAGAGAA+TGG | 0.379786 | 8.3:-5765678 | None:intergenic |
| CCATTCTCTGTGACCAAACT+TGG | 0.381533 | 8.3:+5765678 | MS.gene061221:CDS |
| TCCTTTCACTGCCACATTGT+GGG | 0.385409 | 8.3:+5766498 | MS.gene061221:CDS |
| GGCTAAAGGTTTACCTGTTA+CGG | 0.394794 | 8.3:+5766733 | MS.gene061221:CDS |
| TTCACTGCCACATTGTGGGT+TGG | 0.395199 | 8.3:+5766502 | MS.gene061221:CDS |
| AAGGATGGTGTTATGCCTTT+GGG | 0.400443 | 8.3:+5768714 | MS.gene061221:CDS |
| CTGTTATCAGTTCTGGCTAA+AGG | 0.403419 | 8.3:+5766719 | MS.gene061221:CDS |
| CTTTCTGAGGAAATATTAGA+AGG | 0.408472 | 8.3:-5766436 | None:intergenic |
| ACACTGATCGGCATCCCTAA+TGG | 0.427912 | 8.3:+5765768 | MS.gene061221:CDS |
| AAGATGTTGCCATGGGCATA+TGG | 0.431266 | 8.3:+5768584 | MS.gene061221:CDS |
| TAGAATCATTTGGTGGTGAA+TGG | 0.435315 | 8.3:-5765332 | None:intergenic |
| CCACCATGGGCACATGGTCC+TGG | 0.440633 | 8.3:+5767799 | MS.gene061221:CDS |
| AGATGGCTTCCCTTTGAGGC+TGG | 0.441178 | 8.3:-5767563 | None:intergenic |
| CAAAGGCATAACACCATCCT+TGG | 0.450169 | 8.3:-5768712 | None:intergenic |
| TTAAAGAGGCTTCTGTAGCT+TGG | 0.451470 | 8.3:+5765577 | MS.gene061221:CDS |
| GAATGGCTCTGAGGAGGTCC+TGG | 0.454334 | 8.3:+5766867 | MS.gene061221:CDS |
| TGGACGGAAGCTCAAGCATA+TGG | 0.456280 | 8.3:+5767235 | MS.gene061221:CDS |
| TTGAAAATGAAGAAGTGGTA+TGG | 0.458715 | 8.3:+5765198 | None:intergenic |
| CAGATGATGATGCTTTCATA+AGG | 0.464275 | 8.3:+5767524 | MS.gene061221:CDS |
| GTCATCTCCTGATAGGGATA+AGG | 0.468655 | 8.3:+5767618 | MS.gene061221:CDS |
| CTTTCTGCAGTTTCTCCCAA+AGG | 0.470786 | 8.3:-5768729 | None:intergenic |
| CAATATGAGGCTGTACGTTC+TGG | 0.471244 | 8.3:+5766893 | MS.gene061221:CDS |
| ATCCTTTCACTGCCACATTG+TGG | 0.477470 | 8.3:+5766497 | MS.gene061221:CDS |
| GTCTATCTTACTAATCTTCG+AGG | 0.478025 | 8.3:-5765634 | None:intergenic |
| ATTCGTTGTCTTTGGCCACC+AGG | 0.479400 | 8.3:+5767849 | MS.gene061221:CDS |
| GTCAGCACGATTAAAGTAGC+AGG | 0.484951 | 8.3:+5766686 | MS.gene061221:CDS |
| AGCTTTCAGATTGAGCTAGC+TGG | 0.485254 | 8.3:+5765801 | MS.gene061221:CDS |
| ATTGAACAATTTAGGAATGG+TGG | 0.485712 | 8.3:+5768607 | MS.gene061221:CDS |
| AAACTATAATAATCAACAAA+AGG | 0.494113 | 8.3:-5767274 | None:intergenic |
| TTTCTGATCTGCATCGAAAG+AGG | 0.495941 | 8.3:-5765385 | None:intergenic |
| TTCTAAGTCATCTCCTGATA+GGG | 0.503233 | 8.3:+5767612 | MS.gene061221:CDS |
| TTGATCGGAGTATTCTCTAC+CGG | 0.508883 | 8.3:+5766827 | MS.gene061221:CDS |
| AGGACCTCCTCAGAGCCATT+CGG | 0.510477 | 8.3:-5766865 | None:intergenic |
| TCATGCTAAATATACCTTTG+CGG | 0.511523 | 8.3:-5765989 | None:intergenic |
| CGTATATTGTTCAAAATACA+TGG | 0.517784 | 8.3:+5765907 | MS.gene061221:CDS |
| ACATTGTGGGTTGGGTCAGA+AGG | 0.519182 | 8.3:+5766511 | MS.gene061221:CDS |
| TCGCGAGATATGACATATCC+AGG | 0.523922 | 8.3:-5767817 | None:intergenic |
| GAAGTGCTTTCCAGCCTCAA+AGG | 0.527978 | 8.3:+5767553 | MS.gene061221:CDS |
| ATGTTAGCAGAACCATGAGC+AGG | 0.528160 | 8.3:-5765966 | None:intergenic |
| ACCCACAATGTGGCAGTGAA+AGG | 0.532066 | 8.3:-5766499 | None:intergenic |
| GATTCTTCTATTACACTGAT+CGG | 0.533821 | 8.3:+5765756 | MS.gene061221:CDS |
| TAAATTAGAAGATGTTGCCA+TGG | 0.541216 | 8.3:+5768576 | MS.gene061221:CDS |
| TGGCACCAAAACCAACAAAA+CGG | 0.544787 | 8.3:+5765409 | MS.gene061221:CDS |
| AAATAACTTTGAGCGCCGAA+TGG | 0.546477 | 8.3:+5766850 | MS.gene061221:CDS |
| AAGTGCTTTCCAGCCTCAAA+GGG | 0.551248 | 8.3:+5767554 | MS.gene061221:CDS |
| AGTTCTATGTGCACTTTCTG+AGG | 0.553560 | 8.3:-5766449 | None:intergenic |
| AAATTAGAAGATGTTGCCAT+GGG | 0.554916 | 8.3:+5768577 | MS.gene061221:CDS |
| CCACATTTGATACATGTCAC+AGG | 0.555339 | 8.3:+5765432 | MS.gene061221:CDS |
| CCATCTGAAGGCCTCTTGTA+CGG | 0.556208 | 8.3:+5767580 | MS.gene061221:CDS |
| TCTTTAATAGAATCATTTGG+TGG | 0.557042 | 8.3:-5765339 | None:intergenic |
| TGGATTGAACAATTTAGGAA+TGG | 0.558371 | 8.3:+5768604 | MS.gene061221:CDS |
| TTATAATGCAAGATAATTGG+AGG | 0.560890 | 8.3:-5765849 | None:intergenic |
| GTTTATTGAAAATGAAGAAG+TGG | 0.561747 | 8.3:+5765193 | None:intergenic |
| GAGGAAAGATGCCCTGCTCA+TGG | 0.566659 | 8.3:+5765954 | MS.gene061221:CDS |
| CTCAAAGGGAAGCCATCTGA+AGG | 0.569898 | 8.3:+5767568 | MS.gene061221:CDS |
| CACATGATACGTACCCACCA+TGG | 0.571594 | 8.3:+5767785 | MS.gene061221:CDS |
| TTCATATGACTGTAAATGGA+AGG | 0.574417 | 8.3:+5766536 | MS.gene061221:CDS |
| ATTTACGTTTGTTGCTGTCG+AGG | 0.575180 | 8.3:+5765523 | MS.gene061221:CDS |
| AATAGCTCAAGGAGTTAAAG+AGG | 0.578574 | 8.3:+5765563 | MS.gene061221:CDS |
| CGATGCAGAATCTTGAACCA+TGG | 0.589458 | 8.3:+5766660 | MS.gene061221:intron |
| ACATGATACGTACCCACCAT+GGG | 0.589834 | 8.3:+5767786 | MS.gene061221:CDS |
| CAGGACCATGTGCCCATGGT+GGG | 0.590057 | 8.3:-5767798 | None:intergenic |
| TATCCAGGACCATGTGCCCA+TGG | 0.590642 | 8.3:-5767802 | None:intergenic |
| TACAGCCTCATATTGCATCC+AGG | 0.592681 | 8.3:-5766885 | None:intergenic |
| TTCATTATGAGAATGATGAG+AGG | 0.592883 | 8.3:+5768638 | MS.gene061221:CDS |
| ATCACACTGGATCTCCCTTG+TGG | 0.593261 | 8.3:+5765723 | MS.gene061221:CDS |
| TTGCGCATTATCAAAATCCA+AGG | 0.595140 | 8.3:+5768695 | MS.gene061221:CDS |
| ACGTACCCACCATGGGCACA+TGG | 0.599828 | 8.3:+5767793 | MS.gene061221:CDS |
| CACATTTGATACATGTCACA+GGG | 0.607371 | 8.3:+5765433 | MS.gene061221:CDS |
| TTAATCGTGCTGACTAACCA+TGG | 0.610947 | 8.3:-5766677 | None:intergenic |
| AAGATATTAGACCGTACAAG+AGG | 0.616932 | 8.3:-5767591 | None:intergenic |
| AAAATGAAGAAGTGGTATGG+AGG | 0.619161 | 8.3:+5765201 | None:intergenic |
| AGTTAATCTTGAATTATGGA+CGG | 0.620195 | 8.3:+5767219 | MS.gene061221:CDS |
| AGCTGGACAAGAGCTAGAAG+AGG | 0.621403 | 8.3:+5765818 | MS.gene061221:CDS |
| CCAGGACCATGTGCCCATGG+TGG | 0.623499 | 8.3:-5767799 | None:intergenic |
| CCGTACAAGAGGCCTTCAGA+TGG | 0.626770 | 8.3:-5767580 | None:intergenic |
| GAATCTACGACCAAACCACA+AGG | 0.628470 | 8.3:-5765738 | None:intergenic |
| TTGTTCAATCCATATGCCCA+TGG | 0.632568 | 8.3:-5768593 | None:intergenic |
| AGCGCCGAATGGCTCTGAGG+AGG | 0.634744 | 8.3:+5766861 | MS.gene061221:CDS |
| GCATTATCAAAATCCAAGGA+TGG | 0.638592 | 8.3:+5768699 | MS.gene061221:CDS |
| TCGAAGATTAGTAAGATAGA+CGG | 0.641292 | 8.3:+5765636 | MS.gene061221:CDS |
| GACAGATAGTGAAATCACAC+TGG | 0.646133 | 8.3:+5765710 | MS.gene061221:CDS |
| GGTTCTGCTAACATCCGCAA+AGG | 0.648279 | 8.3:+5765975 | MS.gene061221:CDS |
| TGTTAGCAGAACCATGAGCA+GGG | 0.651531 | 8.3:-5765965 | None:intergenic |
| GAGGTCCTGGATGCAATATG+AGG | 0.652896 | 8.3:+5766880 | MS.gene061221:CDS |
| TTGAGCGCCGAATGGCTCTG+AGG | 0.661301 | 8.3:+5766858 | MS.gene061221:CDS |
| GCTTTGCCCGAAATAGCTCA+AGG | 0.661971 | 8.3:+5765552 | MS.gene061221:CDS |
| ATAGGGATAAGGACAGCAAG+TGG | 0.679605 | 8.3:+5767629 | MS.gene061221:CDS |
| TTCTGACCCAACCCACAATG+TGG | 0.693365 | 8.3:-5766509 | None:intergenic |
| TGTTGATGTTGAGAACCTGA+AGG | 0.697040 | 8.3:+5766772 | MS.gene061221:CDS |
| CCTGTGACATGTATCAAATG+TGG | 0.710894 | 8.3:-5765432 | None:intergenic |
| CAAGTGGTACATCAGTGACG+AGG | 0.722140 | 8.3:+5767645 | MS.gene061221:CDS |
| AATCTACGACCAAACCACAA+GGG | 0.735183 | 8.3:-5765737 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAATTAAATAATTGGAA+TGG | + | chr8.3:5766612-5766631 | MS.gene061221:intron | 10.0% |
| !! | AAACTATAATAATCAACAAA+AGG | - | chr8.3:5767277-5767296 | None:intergenic | 15.0% |
| !! | ACTGCTAAAAATTAAATAAT+TGG | + | chr8.3:5766607-5766626 | MS.gene061221:intron | 15.0% |
| !! | TTAATGTCATCTTAAAATTT+GGG | - | chr8.3:5768134-5768153 | None:intergenic | 15.0% |
| !! | TTTAATGTCATCTTAAAATT+TGG | - | chr8.3:5768135-5768154 | None:intergenic | 15.0% |
| !!! | ATTTTTTTAGCACAATAAAA+TGG | + | chr8.3:5767012-5767031 | MS.gene061221:intron | 15.0% |
| !!! | CATTATCTTATTGTTATTTT+AGG | + | chr8.3:5767756-5767775 | MS.gene061221:intron | 15.0% |
| !!! | TTTTCTTTAATAGAATCATT+TGG | - | chr8.3:5765345-5765364 | None:intergenic | 15.0% |
| !! | AAATAAAATTCAGCAGTTAA+TGG | - | chr8.3:5768535-5768554 | None:intergenic | 20.0% |
| !! | ACATTATAATGCAAGATAAT+TGG | - | chr8.3:5765855-5765874 | None:intergenic | 20.0% |
| !! | ATAGAATAAAAATGCAATGA+TGG | - | chr8.3:5768480-5768499 | None:intergenic | 20.0% |
| !! | ATAGAGTTAATCTTGAATTA+TGG | + | chr8.3:5767215-5767234 | MS.gene061221:CDS | 20.0% |
| !! | ATTATAACAAAACTTCATGA+TGG | - | chr8.3:5767910-5767929 | None:intergenic | 20.0% |
| !! | ATTTCAAGGATATATCTTAA+GGG | + | chr8.3:5767939-5767958 | MS.gene061221:intron | 20.0% |
| !! | ATTTGATTCCTCTTAAAATT+TGG | - | chr8.3:5768345-5768364 | None:intergenic | 20.0% |
| !! | CTGAAAATGAACTTATAAAT+GGG | + | chr8.3:5768273-5768292 | MS.gene061221:intron | 20.0% |
| !! | GAAAAATAAAAATTTATGGG+AGG | - | chr8.3:5767729-5767748 | None:intergenic | 20.0% |
| !! | TAAAAGAATTGGAACTTAAA+TGG | + | chr8.3:5768405-5768424 | MS.gene061221:intron | 20.0% |
| !! | TATTTCAAGGATATATCTTA+AGG | + | chr8.3:5767938-5767957 | MS.gene061221:intron | 20.0% |
| !! | TCGACAAAAATATAAAATGT+TGG | - | chr8.3:5766643-5766662 | None:intergenic | 20.0% |
| !! | TCTGAAAATGAACTTATAAA+TGG | + | chr8.3:5768272-5768291 | MS.gene061221:intron | 20.0% |
| !! | TGAAAATGAACTTATAAATG+GGG | + | chr8.3:5768274-5768293 | MS.gene061221:intron | 20.0% |
| !! | TTATAACAAAACTTCATGAT+GGG | - | chr8.3:5767909-5767928 | None:intergenic | 20.0% |
| !!! | AAAAATCACATATTTCTAGT+TGG | - | chr8.3:5766119-5766138 | None:intergenic | 20.0% |
| !!! | CATGTATTTTGAACAATATA+CGG | - | chr8.3:5765909-5765928 | None:intergenic | 20.0% |
| !!! | GAAGTTTTGTTATAATCTTT+CGG | + | chr8.3:5767914-5767933 | MS.gene061221:intron | 20.0% |
| !!! | TCTTATTGTTATTTTAGGAA+TGG | + | chr8.3:5767761-5767780 | MS.gene061221:intron | 20.0% |
| !!! | TTAATATCACAAATTTTCCT+GGG | + | chr8.3:5768370-5768389 | MS.gene061221:intron | 20.0% |
| !!! | TTTTCATGATGTATTTAGAA+GGG | - | chr8.3:5767504-5767523 | None:intergenic | 20.0% |
| ! | ACAAGAGAGGAATAATTTAA+AGG | - | chr8.3:5767145-5767164 | None:intergenic | 25.0% |
| ! | ACCACTTATGTTAAAAGAAT+TGG | + | chr8.3:5768394-5768413 | MS.gene061221:intron | 25.0% |
| ! | AGTTAATCTTGAATTATGGA+CGG | + | chr8.3:5767219-5767238 | MS.gene061221:CDS | 25.0% |
| ! | ATAATCTTTCGGATATTTCA+AGG | + | chr8.3:5767925-5767944 | MS.gene061221:intron | 25.0% |
| ! | ATTAAGAGTCTCAAATTGAT+TGG | + | chr8.3:5768240-5768259 | MS.gene061221:intron | 25.0% |
| ! | ATTCCTCTTAAAATTTGGAT+CGG | - | chr8.3:5768340-5768359 | None:intergenic | 25.0% |
| ! | CGTATATTGTTCAAAATACA+TGG | + | chr8.3:5765907-5765926 | MS.gene061221:CDS | 25.0% |
| ! | CTTAAATATGTATTCGCAAA+AGG | + | chr8.3:5768446-5768465 | MS.gene061221:intron | 25.0% |
| ! | GAAAATGAACTTATAAATGG+GGG | + | chr8.3:5768275-5768294 | MS.gene061221:intron | 25.0% |
| ! | TCTTTAATAGAATCATTTGG+TGG | - | chr8.3:5765342-5765361 | None:intergenic | 25.0% |
| ! | TTATAATGCAAGATAATTGG+AGG | - | chr8.3:5765852-5765871 | None:intergenic | 25.0% |
| ! | TTGCTATAATATTGAATGCA+TGG | - | chr8.3:5767113-5767132 | None:intergenic | 25.0% |
| !! | AATATGTGATTTTTATGTCG+AGG | + | chr8.3:5766125-5766144 | MS.gene061221:intron | 25.0% |
| !! | ACAATTGCAATTTGCATTTT+GGG | + | chr8.3:5767310-5767329 | MS.gene061221:CDS | 25.0% |
| !! | ATGAAACATCTTTTGCATAT+AGG | + | chr8.3:5766560-5766579 | MS.gene061221:CDS | 25.0% |
| !! | ATTCTATTCATCTTGCTATA+TGG | + | chr8.3:5768493-5768512 | MS.gene061221:intron | 25.0% |
| !! | CTTAATATCACAAATTTTCC+TGG | + | chr8.3:5768369-5768388 | MS.gene061221:intron | 25.0% |
| !! | GTTTATTTGTTAGTTAATGC+TGG | + | chr8.3:5767381-5767400 | MS.gene061221:intron | 25.0% |
| !! | GTTTTCATGATGTATTTAGA+AGG | - | chr8.3:5767505-5767524 | None:intergenic | 25.0% |
| !! | TCCAATTCTTTTAACATAAG+TGG | - | chr8.3:5768398-5768417 | None:intergenic | 25.0% |
| !! | TGAAACATCTTTTGCATATA+GGG | + | chr8.3:5766561-5766580 | MS.gene061221:CDS | 25.0% |
| !!! | AAGCAGTGATTTTTATTTAG+TGG | + | chr8.3:5767409-5767428 | MS.gene061221:intron | 25.0% |
| !!! | AATCAACAAAAGGCATTAAT+TGG | - | chr8.3:5767267-5767286 | None:intergenic | 25.0% |
| !!! | ATGCAATTATAATGGACAAA+AGG | + | chr8.3:5766088-5766107 | MS.gene061221:intron | 25.0% |
| AAAACCTAACAAAAACCCAT+TGG | + | chr8.3:5768152-5768171 | MS.gene061221:intron | 30.0% | |
| AAAATTCAGCAGTTAATGGA+AGG | - | chr8.3:5768531-5768550 | None:intergenic | 30.0% | |
| AAACCTAACAAAAACCCATT+GGG | + | chr8.3:5768153-5768172 | MS.gene061221:intron | 30.0% | |
| AAACTGCACTCAAGAATAAA+AGG | - | chr8.3:5766275-5766294 | None:intergenic | 30.0% | |
| AAATTAGAAGATGTTGCCAT+GGG | + | chr8.3:5768577-5768596 | MS.gene061221:CDS | 30.0% | |
| ACAAAATGAGTTCATAAGTG+GGG | + | chr8.3:5768059-5768078 | MS.gene061221:intron | 30.0% | |
| AGATTTGTAATGGTTGAGTT+AGG | + | chr8.3:5768103-5768122 | MS.gene061221:intron | 30.0% | |
| ATAGCAAAATTCGTTGTCTT+TGG | + | chr8.3:5767841-5767860 | MS.gene061221:CDS | 30.0% | |
| ATATCATTATCTTCCGTAAC+AGG | - | chr8.3:5766749-5766768 | None:intergenic | 30.0% | |
| ATTGAACAATTTAGGAATGG+TGG | + | chr8.3:5768607-5768626 | MS.gene061221:CDS | 30.0% | |
| CAACAATCAAGTAAAGTATG+CGG | - | chr8.3:5767995-5768014 | None:intergenic | 30.0% | |
| CAATGAATGTTGTACTTGTT+TGG | + | chr8.3:5765496-5765515 | MS.gene061221:CDS | 30.0% | |
| CACAAAATGAGTTCATAAGT+GGG | + | chr8.3:5768058-5768077 | MS.gene061221:intron | 30.0% | |
| GATTCTTCTATTACACTGAT+CGG | + | chr8.3:5765756-5765775 | MS.gene061221:CDS | 30.0% | |
| GCATACTTTACTTGATTGTT+GGG | + | chr8.3:5767994-5768013 | MS.gene061221:intron | 30.0% | |
| GGATTTCATATGACTGTAAA+TGG | + | chr8.3:5766532-5766551 | MS.gene061221:CDS | 30.0% | |
| TAAATTAGAAGATGTTGCCA+TGG | + | chr8.3:5768576-5768595 | MS.gene061221:CDS | 30.0% | |
| TAACTCAACCATTACAAATC+TGG | - | chr8.3:5768104-5768123 | None:intergenic | 30.0% | |
| TACCTAAAGCCATGATAAAA+AGG | - | chr8.3:5765227-5765246 | None:intergenic | 30.0% | |
| TAGCACAATAAAATGGCAAT+AGG | + | chr8.3:5767019-5767038 | MS.gene061221:intron | 30.0% | |
| TCATGCTAAATATACCTTTG+CGG | - | chr8.3:5765992-5766011 | None:intergenic | 30.0% | |
| TCGAAGATTAGTAAGATAGA+CGG | + | chr8.3:5765636-5765655 | MS.gene061221:CDS | 30.0% | |
| TCGTTTGCATGCAATTATAA+TGG | + | chr8.3:5766080-5766099 | MS.gene061221:intron | 30.0% | |
| TGGATTGAACAATTTAGGAA+TGG | + | chr8.3:5768604-5768623 | MS.gene061221:CDS | 30.0% | |
| TGTCATCTTAAAATTTGGGT+TGG | - | chr8.3:5768130-5768149 | None:intergenic | 30.0% | |
| TTCATATGACTGTAAATGGA+AGG | + | chr8.3:5766536-5766555 | MS.gene061221:CDS | 30.0% | |
| TTCATTATGAGAATGATGAG+AGG | + | chr8.3:5768638-5768657 | MS.gene061221:CDS | 30.0% | |
| TTCCTCTTAAAATTTGGATC+GGG | - | chr8.3:5768339-5768358 | None:intergenic | 30.0% | |
| TTTAACTCCTTGAGCTATTT+CGG | - | chr8.3:5765562-5765581 | None:intergenic | 30.0% | |
| TTTAAGTCTGTTATCAGTTC+TGG | + | chr8.3:5766712-5766731 | MS.gene061221:CDS | 30.0% | |
| TTTATAATTCGAACCTAGCT+TGG | + | chr8.3:5766163-5766182 | MS.gene061221:intron | 30.0% | |
| TTTCTACTGTACAGTCTTAA+AGG | + | chr8.3:5765255-5765274 | MS.gene061221:CDS | 30.0% | |
| ! | AACAAAACAAGCCTTTTTCT+AGG | - | chr8.3:5766809-5766828 | None:intergenic | 30.0% |
| ! | AATTGCAATTTGCATTTTGG+GGG | + | chr8.3:5767312-5767331 | MS.gene061221:CDS | 30.0% |
| ! | ACAAAACAAGCCTTTTTCTA+GGG | - | chr8.3:5766808-5766827 | None:intergenic | 30.0% |
| ! | AGAACAGTTTTTAACAAGAG+AGG | - | chr8.3:5767158-5767177 | None:intergenic | 30.0% |
| ! | CAATTGCAATTTGCATTTTG+GGG | + | chr8.3:5767311-5767330 | MS.gene061221:CDS | 30.0% |
| ! | CTTTCTGAGGAAATATTAGA+AGG | - | chr8.3:5766439-5766458 | None:intergenic | 30.0% |
| ! | GACAATTGCAATTTGCATTT+TGG | + | chr8.3:5767309-5767328 | MS.gene061221:CDS | 30.0% |
| ! | GCATATGGATTGAACAATTT+AGG | + | chr8.3:5768599-5768618 | MS.gene061221:CDS | 30.0% |
| ! | GTCATCTTAAAATTTGGGTT+GGG | - | chr8.3:5768129-5768148 | None:intergenic | 30.0% |
| !! | TTACTTTGAGTTTTCTTTCC+TGG | - | chr8.3:5767870-5767889 | None:intergenic | 30.0% |
| !!! | AAAAGGCTTGTTTTGTTGAT+CGG | + | chr8.3:5766812-5766831 | MS.gene061221:CDS | 30.0% |
| !!! | AATACATGGACTAGTGATTT+TGG | + | chr8.3:5765921-5765940 | MS.gene061221:CDS | 30.0% |
| !!! | AATGGACAGTTTTGATTTTC+TGG | - | chr8.3:5765663-5765682 | None:intergenic | 30.0% |
| !!! | ATACATGGACTAGTGATTTT+GGG | + | chr8.3:5765922-5765941 | MS.gene061221:CDS | 30.0% |
| !!! | ATGGACAGTTTTGATTTTCT+GGG | - | chr8.3:5765662-5765681 | None:intergenic | 30.0% |
| !!! | TTGAGTGCAGTTTTTTATGA+GGG | + | chr8.3:5766282-5766301 | MS.gene061221:intron | 30.0% |
| AACAAGACATAATCCAAGCT+AGG | - | chr8.3:5766179-5766198 | None:intergenic | 35.0% | |
| AAGATATTAGACCGTACAAG+AGG | - | chr8.3:5767594-5767613 | None:intergenic | 35.0% | |
| AATAGCTCAAGGAGTTAAAG+AGG | + | chr8.3:5765563-5765582 | MS.gene061221:CDS | 35.0% | |
| CAAAATGAGTTCATAAGTGG+GGG | + | chr8.3:5768060-5768079 | MS.gene061221:intron | 35.0% | |
| CACATTTGATACATGTCACA+GGG | + | chr8.3:5765433-5765452 | MS.gene061221:CDS | 35.0% | |
| CATCAACTACATCATAGAGT+TGG | - | chr8.3:5766336-5766355 | None:intergenic | 35.0% | |
| CATTATAATGTGAGTCTTCC+TGG | + | chr8.3:5765864-5765883 | MS.gene061221:CDS | 35.0% | |
| CCACAAAATGAGTTCATAAG+TGG | + | chr8.3:5768057-5768076 | MS.gene061221:intron | 35.0% | |
| CGCATACTTTACTTGATTGT+TGG | + | chr8.3:5767993-5768012 | MS.gene061221:intron | 35.0% | |
| CTCAAATTGATTGGATGAGA+AGG | + | chr8.3:5768249-5768268 | MS.gene061221:intron | 35.0% | |
| CTTACAAGCCAGATTTGTAA+TGG | + | chr8.3:5768093-5768112 | MS.gene061221:intron | 35.0% | |
| GCATTATCAAAATCCAAGGA+TGG | + | chr8.3:5768699-5768718 | MS.gene061221:CDS | 35.0% | |
| GGACTTATCTCATCAAATGT+GGG | - | chr8.3:5768039-5768058 | None:intergenic | 35.0% | |
| GTCTATCTTACTAATCTTCG+AGG | - | chr8.3:5765637-5765656 | None:intergenic | 35.0% | |
| TACCATCTTCATTCCTTAGT+AGG | + | chr8.3:5766203-5766222 | MS.gene061221:intron | 35.0% | |
| TCAATCCTTACAAAACCGTA+AGG | - | chr8.3:5768310-5768329 | None:intergenic | 35.0% | |
| TGCAAGATAATTGGAGGATT+TGG | - | chr8.3:5765846-5765865 | None:intergenic | 35.0% | |
| TGGACTTATCTCATCAAATG+TGG | - | chr8.3:5768040-5768059 | None:intergenic | 35.0% | |
| TTCTAAGTCATCTCCTGATA+GGG | + | chr8.3:5767612-5767631 | MS.gene061221:CDS | 35.0% | |
| TTGCGCATTATCAAAATCCA+AGG | + | chr8.3:5768695-5768714 | MS.gene061221:CDS | 35.0% | |
| TTTACTTGATTGTTGGGACT+GGG | + | chr8.3:5768000-5768019 | MS.gene061221:intron | 35.0% | |
| TTTCGATGCAGATCAGAAAA+TGG | + | chr8.3:5765389-5765408 | MS.gene061221:CDS | 35.0% | |
| ! | AACATCTTTTGCATATAGGG+AGG | + | chr8.3:5766564-5766583 | MS.gene061221:CDS | 35.0% |
| ! | AAGCTACTGTTTTGTCCATT+AGG | - | chr8.3:5765786-5765805 | None:intergenic | 35.0% |
| ! | ACAAAACTTCATGATGGGAA+AGG | - | chr8.3:5767904-5767923 | None:intergenic | 35.0% |
| ! | AGCTACTGTTTTGTCCATTA+GGG | - | chr8.3:5765785-5765804 | None:intergenic | 35.0% |
| ! | CAGATGATGATGCTTTCATA+AGG | + | chr8.3:5767524-5767543 | MS.gene061221:CDS | 35.0% |
| ! | CATATAGGGAGGTATGATAT+AGG | + | chr8.3:5766575-5766594 | MS.gene061221:intron | 35.0% |
| ! | CATTACAAATCTGGCTTGTA+AGG | - | chr8.3:5768095-5768114 | None:intergenic | 35.0% |
| ! | CCACTTATGAACTCATTTTG+TGG | - | chr8.3:5768060-5768079 | None:intergenic | 35.0% |
| ! | GTTGCTGTCAGATTTTTCAT+TGG | + | chr8.3:5766920-5766939 | MS.gene061221:CDS | 35.0% |
| ! | TGCTAATTTCCCTTTTTCTG+AGG | + | chr8.3:5766471-5766490 | MS.gene061221:CDS | 35.0% |
| ! | TTAACTCCTTGAGCTATTTC+GGG | - | chr8.3:5765561-5765580 | None:intergenic | 35.0% |
| ! | TTTATGAGGGAAGCTTTTAG+TGG | + | chr8.3:5766295-5766314 | MS.gene061221:intron | 35.0% |
| ! | TTTTAACATAAGTGGTTCCC+AGG | - | chr8.3:5768390-5768409 | None:intergenic | 35.0% |
| !! | AAAGGATTAGCCTCAGAAAA+AGG | - | chr8.3:5766484-5766503 | None:intergenic | 35.0% |
| !! | AAGGATTAGCCTCAGAAAAA+GGG | - | chr8.3:5766483-5766502 | None:intergenic | 35.0% |
| !! | CTCGTATTAGAAGTGTCAAA+AGG | + | chr8.3:5767966-5767985 | MS.gene061221:intron | 35.0% |
| !! | GGTTTTGTAAGGATTGAGTT+AGG | + | chr8.3:5768313-5768332 | MS.gene061221:intron | 35.0% |
| !! | TAGAATCATTTGGTGGTGAA+TGG | - | chr8.3:5765335-5765354 | None:intergenic | 35.0% |
| !!! | CTTGAGTGCAGTTTTTTATG+AGG | + | chr8.3:5766281-5766300 | MS.gene061221:intron | 35.0% |
| AACTACATTAGCAACACCTC+AGG | + | chr8.3:5766233-5766252 | MS.gene061221:intron | 40.0% | |
| AAGCAAGATAGCATAACCTG+AGG | - | chr8.3:5766252-5766271 | None:intergenic | 40.0% | |
| AATCTACGACCAAACCACAA+GGG | - | chr8.3:5765740-5765759 | None:intergenic | 40.0% | |
| AGCCTACTAAGGAATGAAGA+TGG | - | chr8.3:5766208-5766227 | None:intergenic | 40.0% | |
| AGTTCTATGTGCACTTTCTG+AGG | - | chr8.3:5766452-5766471 | None:intergenic | 40.0% | |
| CACTCACTATTGGAACACTT+GGG | + | chr8.3:5768177-5768196 | MS.gene061221:intron | 40.0% | |
| CCACATTTGATACATGTCAC+AGG | + | chr8.3:5765432-5765451 | MS.gene061221:CDS | 40.0% | |
| CCTGTGACATGTATCAAATG+TGG | - | chr8.3:5765435-5765454 | None:intergenic | 40.0% | |
| CTTCTAAGTCATCTCCTGAT+AGG | + | chr8.3:5767611-5767630 | MS.gene061221:CDS | 40.0% | |
| CTTTACTTGATTGTTGGGAC+TGG | + | chr8.3:5767999-5768018 | MS.gene061221:intron | 40.0% | |
| GACAGATAGTGAAATCACAC+TGG | + | chr8.3:5765710-5765729 | MS.gene061221:CDS | 40.0% | |
| GGCTAAAGGTTTACCTGTTA+CGG | + | chr8.3:5766733-5766752 | MS.gene061221:CDS | 40.0% | |
| GGGTTAAGACTGTTAGAGTA+TGG | - | chr8.3:5767065-5767084 | None:intergenic | 40.0% | |
| GTAGTTACTACAGCCTACTA+AGG | - | chr8.3:5766219-5766238 | None:intergenic | 40.0% | |
| TGGCACCAAAACCAACAAAA+CGG | + | chr8.3:5765409-5765428 | MS.gene061221:CDS | 40.0% | |
| TGTCATTGTCTTGCCAAGTT+TGG | - | chr8.3:5765694-5765713 | None:intergenic | 40.0% | |
| TGTTGATGTTGAGAACCTGA+AGG | + | chr8.3:5766772-5766791 | MS.gene061221:CDS | 40.0% | |
| TTAAAGAGGCTTCTGTAGCT+TGG | + | chr8.3:5765577-5765596 | MS.gene061221:CDS | 40.0% | |
| TTAGTCCACACTACAGCATT+TGG | - | chr8.3:5767089-5767108 | None:intergenic | 40.0% | |
| TTGTTCAATCCATATGCCCA+TGG | - | chr8.3:5768596-5768615 | None:intergenic | 40.0% | |
| TTTCTGATCTGCATCGAAAG+AGG | - | chr8.3:5765388-5765407 | None:intergenic | 40.0% | |
| ! | AAACTTCATGATGGGAAAGG+AGG | - | chr8.3:5767901-5767920 | None:intergenic | 40.0% |
| ! | ATCTCTGTCATGTTTTCTCC+AGG | - | chr8.3:5765885-5765904 | None:intergenic | 40.0% |
| ! | ATTTACGTTTGTTGCTGTCG+AGG | + | chr8.3:5765523-5765542 | MS.gene061221:CDS | 40.0% |
| ! | CTGTTATCAGTTCTGGCTAA+AGG | + | chr8.3:5766719-5766738 | MS.gene061221:CDS | 40.0% |
| ! | GATGAGAGGTTTTACAATGC+TGG | + | chr8.3:5768652-5768671 | MS.gene061221:CDS | 40.0% |
| ! | GGCCTTTTTATCATGGCTTT+AGG | + | chr8.3:5765222-5765241 | MS.gene061221:CDS | 40.0% |
| ! | GTATGGAGGCCTTTTTATCA+TGG | + | chr8.3:5765215-5765234 | MS.gene061221:CDS | 40.0% |
| ! | TTGATCGGAGTATTCTCTAC+CGG | + | chr8.3:5766827-5766846 | MS.gene061221:CDS | 40.0% |
| !! | AAATAACTTTGAGCGCCGAA+TGG | + | chr8.3:5766850-5766869 | MS.gene061221:CDS | 40.0% |
| !! | AAGGATGGTGTTATGCCTTT+GGG | + | chr8.3:5768714-5768733 | MS.gene061221:CDS | 40.0% |
| !! | ATCAAATGTGGCCGTTTTGT+TGG | - | chr8.3:5765423-5765442 | None:intergenic | 40.0% |
| !! | CTTTGAGTTTTCTTTCCTGG+TGG | - | chr8.3:5767867-5767886 | None:intergenic | 40.0% |
| !! | TCTCACCTTACGGTTTTGTA+AGG | + | chr8.3:5768302-5768321 | MS.gene061221:intron | 40.0% |
| !! | TGTTTTGCTGACTGCTTTTG+TGG | - | chr8.3:5765288-5765307 | None:intergenic | 40.0% |
| !! | TTAATCGTGCTGACTAACCA+TGG | - | chr8.3:5766680-5766699 | None:intergenic | 40.0% |
| !!! | ATGGACTAGTGATTTTGGGT+GGG | + | chr8.3:5765926-5765945 | MS.gene061221:CDS | 40.0% |
| AAGATGTTGCCATGGGCATA+TGG | + | chr8.3:5768584-5768603 | MS.gene061221:CDS | 45.0% | |
| AAGTGCTTTCCAGCCTCAAA+GGG | + | chr8.3:5767554-5767573 | MS.gene061221:CDS | 45.0% | |
| ACACTCCATATGTCCAGTCT+TGG | + | chr8.3:5768202-5768221 | MS.gene061221:intron | 45.0% | |
| ACATGATACGTACCCACCAT+GGG | + | chr8.3:5767786-5767805 | MS.gene061221:CDS | 45.0% | |
| AGCTTTCAGATTGAGCTAGC+TGG | + | chr8.3:5765801-5765820 | MS.gene061221:CDS | 45.0% | |
| ATAGGGATAAGGACAGCAAG+TGG | + | chr8.3:5767629-5767648 | MS.gene061221:CDS | 45.0% | |
| ATATGTCATACGCCCAAGAC+TGG | - | chr8.3:5768218-5768237 | None:intergenic | 45.0% | |
| ATCCTTTCACTGCCACATTG+TGG | + | chr8.3:5766497-5766516 | MS.gene061221:CDS | 45.0% | |
| ATGTTAGCAGAACCATGAGC+AGG | - | chr8.3:5765969-5765988 | None:intergenic | 45.0% | |
| CAATATGAGGCTGTACGTTC+TGG | + | chr8.3:5766893-5766912 | MS.gene061221:CDS | 45.0% | |
| CACTCCATATGTCCAGTCTT+GGG | + | chr8.3:5768203-5768222 | MS.gene061221:intron | 45.0% | |
| CCAAGTGTTCCAATAGTGAG+TGG | - | chr8.3:5768179-5768198 | None:intergenic | 45.0% | |
| CCAAGTTTGGTCACAGAGAA+TGG | - | chr8.3:5765681-5765700 | None:intergenic | 45.0% | |
| CCACTCACTATTGGAACACT+TGG | + | chr8.3:5768176-5768195 | MS.gene061221:intron | 45.0% | |
| CCATTCTCTGTGACCAAACT+TGG | + | chr8.3:5765678-5765697 | MS.gene061221:CDS | 45.0% | |
| CGATGCAGAATCTTGAACCA+TGG | + | chr8.3:5766660-5766679 | MS.gene061221:intron | 45.0% | |
| CTCATCAAATGTGGGACTCT+TGG | - | chr8.3:5768031-5768050 | None:intergenic | 45.0% | |
| CTCCAGCTATCCCTAGAAAA+AGG | + | chr8.3:5766795-5766814 | MS.gene061221:CDS | 45.0% | |
| CTTTCTGCAGTTTCTCCCAA+AGG | - | chr8.3:5768732-5768751 | None:intergenic | 45.0% | |
| GAATCTACGACCAAACCACA+AGG | - | chr8.3:5765741-5765760 | None:intergenic | 45.0% | |
| GTCAGCACGATTAAAGTAGC+AGG | + | chr8.3:5766686-5766705 | MS.gene061221:CDS | 45.0% | |
| GTCATCTCCTGATAGGGATA+AGG | + | chr8.3:5767618-5767637 | MS.gene061221:CDS | 45.0% | |
| TACAGCCTCATATTGCATCC+AGG | - | chr8.3:5766888-5766907 | None:intergenic | 45.0% | |
| TCCACACTACAGCATTTGGT+GGG | - | chr8.3:5767085-5767104 | None:intergenic | 45.0% | |
| TCCTTTCACTGCCACATTGT+GGG | + | chr8.3:5766498-5766517 | MS.gene061221:CDS | 45.0% | |
| TCGCGAGATATGACATATCC+AGG | - | chr8.3:5767820-5767839 | None:intergenic | 45.0% | |
| TGTTAGCAGAACCATGAGCA+GGG | - | chr8.3:5765968-5765987 | None:intergenic | 45.0% | |
| TTGCTGTCCTTATCCCTATC+AGG | - | chr8.3:5767628-5767647 | None:intergenic | 45.0% | |
| ! | CAAAGGCATAACACCATCCT+TGG | - | chr8.3:5768715-5768734 | None:intergenic | 45.0% |
| ! | GGCCCGATCCAAATTTTAAG+AGG | + | chr8.3:5768334-5768353 | MS.gene061221:intron | 45.0% |
| ! | TCGGCGCTCAAAGTTATTTC+CGG | - | chr8.3:5766849-5766868 | None:intergenic | 45.0% |
| !! | AGCCTTTTTCTAGGGATAGC+TGG | - | chr8.3:5766800-5766819 | None:intergenic | 45.0% |
| !! | CAAGGATGGTGTTATGCCTT+TGG | + | chr8.3:5768713-5768732 | MS.gene061221:CDS | 45.0% |
| !! | TGGCCCAATGGGTTTTTGTT+AGG | - | chr8.3:5768159-5768178 | None:intergenic | 45.0% |
| !!! | CATGGACTAGTGATTTTGGG+TGG | + | chr8.3:5765925-5765944 | MS.gene061221:CDS | 45.0% |
| !!! | TGGACTAGTGATTTTGGGTG+GGG | + | chr8.3:5765927-5765946 | MS.gene061221:CDS | 45.0% |
| !!! | TGTGGCCGTTTTGTTGGTTT+TGG | - | chr8.3:5765417-5765436 | None:intergenic | 45.0% |
| !! | AATAGAAAAATAAAAATTTA+TGG | - | chr8.3:5767733-5767752 | None:intergenic | 5.0% |
| !! | ATAGAAAAATAAAAATTTAT+GGG | - | chr8.3:5767732-5767751 | None:intergenic | 5.0% |
| !! | TAAAAAATAAATAACAAATA+AGG | - | chr8.3:5767463-5767482 | None:intergenic | 5.0% |
| ACACACACACACACACACAG+AGG | - | chr8.3:5767677-5767696 | None:intergenic | 50.0% | |
| ACACTGATCGGCATCCCTAA+TGG | + | chr8.3:5765768-5765787 | MS.gene061221:CDS | 50.0% | |
| ACCCACAATGTGGCAGTGAA+AGG | - | chr8.3:5766502-5766521 | None:intergenic | 50.0% | |
| ACCCACCAAATGCTGTAGTG+TGG | + | chr8.3:5767081-5767100 | MS.gene061221:intron | 50.0% | |
| ACTGGATCTCCCTTGTGGTT+TGG | + | chr8.3:5765728-5765747 | MS.gene061221:CDS | 50.0% | |
| AGCTGGACAAGAGCTAGAAG+AGG | + | chr8.3:5765818-5765837 | MS.gene061221:CDS | 50.0% | |
| ATCACACTGGATCTCCCTTG+TGG | + | chr8.3:5765723-5765742 | MS.gene061221:CDS | 50.0% | |
| ATTCGTTGTCTTTGGCCACC+AGG | + | chr8.3:5767849-5767868 | MS.gene061221:CDS | 50.0% | |
| CAAGTGGTACATCAGTGACG+AGG | + | chr8.3:5767645-5767664 | MS.gene061221:CDS | 50.0% | |
| CACATGATACGTACCCACCA+TGG | + | chr8.3:5767785-5767804 | MS.gene061221:CDS | 50.0% | |
| CCAATAGTGAGTGGCCCAAT+GGG | - | chr8.3:5768170-5768189 | None:intergenic | 50.0% | |
| CCATCTGAAGGCCTCTTGTA+CGG | + | chr8.3:5767580-5767599 | MS.gene061221:CDS | 50.0% | |
| CTCAAAGGGAAGCCATCTGA+AGG | + | chr8.3:5767568-5767587 | MS.gene061221:CDS | 50.0% | |
| CTTCAGATGGCTTCCCTTTG+AGG | - | chr8.3:5767570-5767589 | None:intergenic | 50.0% | |
| GAGGTCCTGGATGCAATATG+AGG | + | chr8.3:5766880-5766899 | MS.gene061221:CDS | 50.0% | |
| GCTTTGCCCGAAATAGCTCA+AGG | + | chr8.3:5765552-5765571 | MS.gene061221:CDS | 50.0% | |
| GGTTCTGCTAACATCCGCAA+AGG | + | chr8.3:5765975-5765994 | MS.gene061221:CDS | 50.0% | |
| GTCCACACTACAGCATTTGG+TGG | - | chr8.3:5767086-5767105 | None:intergenic | 50.0% | |
| TACGCCCAAGACTGGACATA+TGG | - | chr8.3:5768210-5768229 | None:intergenic | 50.0% | |
| TCACTGCCACATTGTGGGTT+GGG | + | chr8.3:5766503-5766522 | MS.gene061221:CDS | 50.0% | |
| TCCAATAGTGAGTGGCCCAA+TGG | - | chr8.3:5768171-5768190 | None:intergenic | 50.0% | |
| TGGACGGAAGCTCAAGCATA+TGG | + | chr8.3:5767235-5767254 | MS.gene061221:CDS | 50.0% | |
| TTCACTGCCACATTGTGGGT+TGG | + | chr8.3:5766502-5766521 | MS.gene061221:CDS | 50.0% | |
| TTCTGACCCAACCCACAATG+TGG | - | chr8.3:5766512-5766531 | None:intergenic | 50.0% | |
| ! | GAAGTGCTTTCCAGCCTCAA+AGG | + | chr8.3:5767553-5767572 | MS.gene061221:CDS | 50.0% |
| !! | ACATTGTGGGTTGGGTCAGA+AGG | + | chr8.3:5766511-5766530 | MS.gene061221:CDS | 50.0% |
| !! | GGACTAGTGATTTTGGGTGG+GGG | + | chr8.3:5765928-5765947 | MS.gene061221:CDS | 50.0% |
| !! | TGATTTTGGGTGGGGGAAAG+AGG | + | chr8.3:5765935-5765954 | MS.gene061221:CDS | 50.0% |
| AGGACCTCCTCAGAGCCATT+CGG | - | chr8.3:5766868-5766887 | None:intergenic | 55.0% | |
| CCCATTGGGCCACTCACTAT+TGG | + | chr8.3:5768167-5768186 | MS.gene061221:intron | 55.0% | |
| CCGTACAAGAGGCCTTCAGA+TGG | - | chr8.3:5767583-5767602 | None:intergenic | 55.0% | |
| GAGGAAAGATGCCCTGCTCA+TGG | + | chr8.3:5765954-5765973 | MS.gene061221:CDS | 55.0% | |
| TAGGGATAGCTGGAGCCTTC+AGG | - | chr8.3:5766790-5766809 | None:intergenic | 55.0% | |
| TATCCAGGACCATGTGCCCA+TGG | - | chr8.3:5767805-5767824 | None:intergenic | 55.0% | |
| TGGGGGCAGTTCTCACCTTA+CGG | + | chr8.3:5768292-5768311 | MS.gene061221:intron | 55.0% | |
| !! | AGATGGCTTCCCTTTGAGGC+TGG | - | chr8.3:5767566-5767585 | None:intergenic | 55.0% |
| ACGTACCCACCATGGGCACA+TGG | + | chr8.3:5767793-5767812 | MS.gene061221:CDS | 60.0% | |
| CAGGACCATGTGCCCATGGT+GGG | - | chr8.3:5767801-5767820 | None:intergenic | 60.0% | |
| !! | GAATGGCTCTGAGGAGGTCC+TGG | + | chr8.3:5766867-5766886 | MS.gene061221:CDS | 60.0% |
| !! | TTGAGCGCCGAATGGCTCTG+AGG | + | chr8.3:5766858-5766877 | MS.gene061221:CDS | 60.0% |
| CCACCATGGGCACATGGTCC+TGG | + | chr8.3:5767799-5767818 | MS.gene061221:CDS | 65.0% | |
| CCAGGACCATGTGCCCATGG+TGG | - | chr8.3:5767802-5767821 | None:intergenic | 65.0% | |
| !! | AGCGCCGAATGGCTCTGAGG+AGG | + | chr8.3:5766861-5766880 | MS.gene061221:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 5765204 | 5768777 | 5765204 | ID=MS.gene061221 |
| chr8.3 | mRNA | 5765204 | 5768777 | 5765204 | ID=MS.gene061221.t1;Parent=MS.gene061221 |
| chr8.3 | exon | 5765204 | 5765996 | 5765204 | ID=MS.gene061221.t1.exon1;Parent=MS.gene061221.t1 |
| chr8.3 | CDS | 5765204 | 5765996 | 5765204 | ID=cds.MS.gene061221.t1;Parent=MS.gene061221.t1 |
| chr8.3 | exon | 5766350 | 5766585 | 5766350 | ID=MS.gene061221.t1.exon2;Parent=MS.gene061221.t1 |
| chr8.3 | CDS | 5766350 | 5766585 | 5766350 | ID=cds.MS.gene061221.t1;Parent=MS.gene061221.t1 |
| chr8.3 | exon | 5766668 | 5766946 | 5766668 | ID=MS.gene061221.t1.exon3;Parent=MS.gene061221.t1 |
| chr8.3 | CDS | 5766668 | 5766946 | 5766668 | ID=cds.MS.gene061221.t1;Parent=MS.gene061221.t1 |
| chr8.3 | exon | 5767205 | 5767333 | 5767205 | ID=MS.gene061221.t1.exon4;Parent=MS.gene061221.t1 |
| chr8.3 | CDS | 5767205 | 5767333 | 5767205 | ID=cds.MS.gene061221.t1;Parent=MS.gene061221.t1 |
| chr8.3 | exon | 5767490 | 5767666 | 5767490 | ID=MS.gene061221.t1.exon5;Parent=MS.gene061221.t1 |
| chr8.3 | CDS | 5767490 | 5767666 | 5767490 | ID=cds.MS.gene061221.t1;Parent=MS.gene061221.t1 |
| chr8.3 | exon | 5767778 | 5767885 | 5767778 | ID=MS.gene061221.t1.exon6;Parent=MS.gene061221.t1 |
| chr8.3 | CDS | 5767778 | 5767885 | 5767778 | ID=cds.MS.gene061221.t1;Parent=MS.gene061221.t1 |
| chr8.3 | exon | 5768571 | 5768777 | 5768571 | ID=MS.gene061221.t1.exon7;Parent=MS.gene061221.t1 |
| chr8.3 | CDS | 5768571 | 5768777 | 5768571 | ID=cds.MS.gene061221.t1;Parent=MS.gene061221.t1 |
| Gene Sequence |
| Protein sequence |
