Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68606.t1 | XP_013458343.1 | 97.2 | 642 | 18 | 0 | 1 | 642 | 1 | 642 | 0.00E+00 | 1264.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68606.t1 | Q9ASW1 | 56.3 | 595 | 241 | 5 | 52 | 642 | 40 | 619 | 3.8e-191 | 669.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68606.t1 | A0A072URG8 | 97.2 | 642 | 18 | 0 | 1 | 642 | 1 | 642 | 0.0e+00 | 1264.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene061221 | MS.gene68606 | 0.991251 | 1.15E-186 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene064542 | MS.gene68606 | PPI |
| MS.gene73119 | MS.gene68606 | PPI |
| MS.gene035805 | MS.gene68606 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68606.t1 | MTR_4g123090 | 97.196 | 642 | 18 | 0 | 1 | 642 | 1 | 642 | 0.0 | 1300 |
| MS.gene68606.t1 | MTR_5g041210 | 49.614 | 647 | 307 | 8 | 1 | 641 | 1 | 634 | 0.0 | 619 |
| MS.gene68606.t1 | MTR_5g041210 | 49.459 | 647 | 306 | 9 | 1 | 641 | 1 | 632 | 0.0 | 611 |
| MS.gene68606.t1 | MTR_2g018770 | 36.460 | 565 | 316 | 12 | 110 | 641 | 132 | 686 | 1.03e-111 | 351 |
| MS.gene68606.t1 | MTR_4g107360 | 37.477 | 539 | 304 | 15 | 120 | 641 | 90 | 612 | 4.69e-110 | 344 |
| MS.gene68606.t1 | MTR_5g037300 | 35.907 | 557 | 319 | 14 | 116 | 641 | 91 | 640 | 3.37e-106 | 335 |
| MS.gene68606.t1 | MTR_8g061960 | 34.532 | 556 | 322 | 15 | 116 | 641 | 106 | 649 | 1.03e-101 | 323 |
| MS.gene68606.t1 | MTR_2g018770 | 34.396 | 439 | 249 | 9 | 110 | 516 | 132 | 563 | 8.05e-68 | 233 |
| MS.gene68606.t1 | MTR_8g463930 | 25.954 | 262 | 173 | 9 | 391 | 641 | 80 | 331 | 5.10e-12 | 68.2 |
| MS.gene68606.t1 | MTR_2g078030 | 25.670 | 261 | 175 | 9 | 391 | 641 | 74 | 325 | 5.80e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68606.t1 | AT3G06440 | 53.715 | 646 | 250 | 8 | 1 | 642 | 19 | 619 | 0.0 | 686 |
| MS.gene68606.t1 | AT3G06440 | 51.008 | 645 | 240 | 9 | 1 | 642 | 19 | 590 | 0.0 | 633 |
| MS.gene68606.t1 | AT1G26810 | 47.005 | 651 | 324 | 7 | 1 | 641 | 1 | 640 | 0.0 | 582 |
| MS.gene68606.t1 | AT1G26810 | 47.005 | 651 | 324 | 7 | 1 | 641 | 1 | 640 | 0.0 | 582 |
| MS.gene68606.t1 | AT5G62620 | 38.372 | 516 | 280 | 10 | 157 | 641 | 170 | 678 | 1.06e-112 | 353 |
| MS.gene68606.t1 | AT1G74800 | 37.024 | 551 | 316 | 13 | 113 | 641 | 128 | 669 | 2.93e-110 | 347 |
| MS.gene68606.t1 | AT1G27120 | 36.502 | 526 | 301 | 11 | 139 | 641 | 124 | 639 | 2.26e-107 | 338 |
| MS.gene68606.t1 | AT1G27120 | 36.742 | 528 | 297 | 11 | 139 | 641 | 155 | 670 | 3.37e-107 | 338 |
| MS.gene68606.t1 | AT4G21060 | 35.110 | 544 | 315 | 13 | 128 | 641 | 146 | 681 | 6.61e-102 | 325 |
| MS.gene68606.t1 | AT4G21060 | 35.110 | 544 | 315 | 13 | 128 | 641 | 203 | 738 | 2.21e-101 | 325 |
| MS.gene68606.t1 | AT5G62620 | 36.080 | 449 | 249 | 10 | 157 | 574 | 170 | 611 | 3.24e-81 | 269 |
| MS.gene68606.t1 | AT2G26100 | 26.641 | 259 | 175 | 6 | 391 | 641 | 107 | 358 | 1.66e-16 | 82.4 |
| MS.gene68606.t1 | AT3G14960 | 27.969 | 261 | 173 | 7 | 389 | 641 | 79 | 332 | 3.50e-16 | 80.9 |
| MS.gene68606.t1 | AT1G53290 | 26.899 | 316 | 195 | 11 | 352 | 641 | 29 | 334 | 1.91e-15 | 78.6 |
| MS.gene68606.t1 | AT2G26100 | 26.106 | 226 | 155 | 3 | 391 | 610 | 107 | 326 | 2.16e-15 | 78.6 |
Find 123 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACAATTGCAATTTGCATTT+TGG | 0.096764 | 8.1:+7842976 | MS.gene68606:CDS |
| AATACATGGACTAGTGATTT+TGG | 0.137369 | 8.1:+7841588 | MS.gene68606:CDS |
| TTTCTACTGTACAGTCTTAA+AGG | 0.188302 | 8.1:+7840922 | MS.gene68606:CDS |
| AATCAACAAAAGGCATTAAT+TGG | 0.212309 | 8.1:-7842931 | None:intergenic |
| TTTAACTCCTTGAGCTATTT+CGG | 0.214747 | 8.1:-7841226 | None:intergenic |
| TGCAAGATAATTGGAGGATT+TGG | 0.247383 | 8.1:-7841510 | None:intergenic |
| AAAGGATTAGCCTCAGAAAA+AGG | 0.248836 | 8.1:-7842148 | None:intergenic |
| GCATATGGATTGAACAATTT+AGG | 0.250872 | 8.1:+7844289 | MS.gene68606:CDS |
| TTAACTCCTTGAGCTATTTC+GGG | 0.251324 | 8.1:-7841225 | None:intergenic |
| TTTAAGTCTGTTATCAGTTC+TGG | 0.251836 | 8.1:+7842379 | MS.gene68606:CDS |
| ATAGAGTTAATCTTGAATTA+TGG | 0.276791 | 8.1:+7842882 | MS.gene68606:CDS |
| ATAGCAAAATTCGTTGTCTT+TGG | 0.279953 | 8.1:+7843531 | MS.gene68606:CDS |
| GATATCTACTCACAACATTC+TGG | 0.289356 | 8.1:-7844450 | None:intergenic |
| CATTATAATGTGAGTCTTCC+TGG | 0.290225 | 8.1:+7841531 | MS.gene68606:CDS |
| ACATTATAATGCAAGATAAT+TGG | 0.291182 | 8.1:-7841519 | None:intergenic |
| GGATTTCATATGACTGTAAA+TGG | 0.300607 | 8.1:+7842199 | MS.gene68606:CDS |
| CTTCAGATGGCTTCCCTTTG+AGG | 0.308752 | 8.1:-7843234 | None:intergenic |
| TACCTAAAGCCATGATAAAA+AGG | 0.316882 | 8.1:-7840891 | None:intergenic |
| TAGGGATAGCTGGAGCCTTC+AGG | 0.328328 | 8.1:-7842454 | None:intergenic |
| CAATGAATGTTGTACTTGTT+TGG | 0.333423 | 8.1:+7841163 | MS.gene68606:CDS |
| TGTCATTGTCTTGCCAAGTT+TGG | 0.340771 | 8.1:-7841358 | None:intergenic |
| CAAGGATGGTGTTATGCCTT+TGG | 0.341498 | 8.1:+7844403 | MS.gene68606:CDS |
| TCGGCGCTCAAAGTTATTTC+CGG | 0.341737 | 8.1:-7842513 | None:intergenic |
| CTCCAGCTATCCCTAGAAAA+AGG | 0.342285 | 8.1:+7842462 | MS.gene68606:CDS |
| CTTCTAAGTCATCTCCTGAT+AGG | 0.344437 | 8.1:+7843278 | MS.gene68606:CDS |
| TCACTGCCACATTGTGGGTT+GGG | 0.361190 | 8.1:+7842170 | MS.gene68606:CDS |
| ATATCATTATCTTCCGTAAC+AGG | 0.362656 | 8.1:-7842413 | None:intergenic |
| TTGCTGTCCTTATCCCTATC+AGG | 0.368376 | 8.1:-7843292 | None:intergenic |
| ACTGGATCTCCCTTGTGGTT+TGG | 0.371403 | 8.1:+7841395 | MS.gene68606:CDS |
| TTTCGATGCAGATCAGAAAA+TGG | 0.377851 | 8.1:+7841056 | MS.gene68606:CDS |
| CCAAGTTTGGTCACAGAGAA+TGG | 0.379786 | 8.1:-7841345 | None:intergenic |
| CCATTCTCTGTGACCAAACT+TGG | 0.381533 | 8.1:+7841345 | MS.gene68606:CDS |
| TCCTTTCACTGCCACATTGT+GGG | 0.385409 | 8.1:+7842165 | MS.gene68606:CDS |
| GGCTAAAGGTTTACCTGTTA+CGG | 0.394794 | 8.1:+7842400 | MS.gene68606:CDS |
| TTCACTGCCACATTGTGGGT+TGG | 0.395199 | 8.1:+7842169 | MS.gene68606:CDS |
| AAGGATGGTGTTATGCCTTT+GGG | 0.400443 | 8.1:+7844404 | MS.gene68606:CDS |
| CTGTTATCAGTTCTGGCTAA+AGG | 0.403419 | 8.1:+7842386 | MS.gene68606:CDS |
| CTTTCTGAGGAAATATTAGA+AGG | 0.408472 | 8.1:-7842103 | None:intergenic |
| ACACTGATCGGCATCCCTAA+TGG | 0.427912 | 8.1:+7841435 | MS.gene68606:CDS |
| AAGATGTTGCCATGGGCATA+TGG | 0.431266 | 8.1:+7844274 | MS.gene68606:CDS |
| TAGAATCATTTGGTGGTGAA+TGG | 0.435315 | 8.1:-7840999 | None:intergenic |
| CCACCATGGGCACATGGTCC+TGG | 0.440633 | 8.1:+7843489 | MS.gene68606:CDS |
| AGATGGCTTCCCTTTGAGGC+TGG | 0.441178 | 8.1:-7843230 | None:intergenic |
| CAAAGGCATAACACCATCCT+TGG | 0.450169 | 8.1:-7844402 | None:intergenic |
| TTAAAGAGGCTTCTGTAGCT+TGG | 0.451470 | 8.1:+7841244 | MS.gene68606:CDS |
| GAATGGCTCTGAGGAGGTCC+TGG | 0.454334 | 8.1:+7842534 | MS.gene68606:CDS |
| TGGACGGAAGCTCAAGCATA+TGG | 0.456280 | 8.1:+7842902 | MS.gene68606:CDS |
| TTGAAAATGAAGAAGTGGTA+TGG | 0.458715 | 8.1:+7840865 | None:intergenic |
| CAGATGATGATGCTTTCATA+AGG | 0.464275 | 8.1:+7843191 | MS.gene68606:CDS |
| GTCATCTCCTGATAGGGATA+AGG | 0.468655 | 8.1:+7843285 | MS.gene68606:CDS |
| CTTTCTGCAGTTTCTCCCAA+AGG | 0.470786 | 8.1:-7844419 | None:intergenic |
| CAATATGAGGCTGTACGTTC+TGG | 0.471244 | 8.1:+7842560 | MS.gene68606:CDS |
| ATCCTTTCACTGCCACATTG+TGG | 0.477470 | 8.1:+7842164 | MS.gene68606:CDS |
| GTCTATCTTACTAATCTTCG+AGG | 0.478025 | 8.1:-7841301 | None:intergenic |
| ATTCGTTGTCTTTGGCCACC+AGG | 0.479400 | 8.1:+7843539 | MS.gene68606:CDS |
| GTCAGCACGATTAAAGTAGC+AGG | 0.484951 | 8.1:+7842353 | MS.gene68606:CDS |
| AGCTTTCAGATTGAGCTAGC+TGG | 0.485254 | 8.1:+7841468 | MS.gene68606:CDS |
| ATTGAACAATTTAGGAATGG+TGG | 0.485712 | 8.1:+7844297 | MS.gene68606:CDS |
| AAACTATAATAATCAACAAA+AGG | 0.494113 | 8.1:-7842941 | None:intergenic |
| TTTCTGATCTGCATCGAAAG+AGG | 0.495941 | 8.1:-7841052 | None:intergenic |
| TTCTAAGTCATCTCCTGATA+GGG | 0.503233 | 8.1:+7843279 | MS.gene68606:CDS |
| TTGATCGGAGTATTCTCTAC+CGG | 0.508883 | 8.1:+7842494 | MS.gene68606:CDS |
| AGGACCTCCTCAGAGCCATT+CGG | 0.510477 | 8.1:-7842532 | None:intergenic |
| TCATGCTAAATATACCTTTG+CGG | 0.511523 | 8.1:-7841656 | None:intergenic |
| CGTATATTGTTCAAAATACA+TGG | 0.517784 | 8.1:+7841574 | MS.gene68606:CDS |
| ACATTGTGGGTTGGGTCAGA+AGG | 0.519182 | 8.1:+7842178 | MS.gene68606:CDS |
| TCGCGAGATATGACATATCC+AGG | 0.523922 | 8.1:-7843507 | None:intergenic |
| GAAGTGCTTTCCAGCCTCAA+AGG | 0.527978 | 8.1:+7843220 | MS.gene68606:CDS |
| ATGTTAGCAGAACCATGAGC+AGG | 0.528160 | 8.1:-7841633 | None:intergenic |
| ACCCACAATGTGGCAGTGAA+AGG | 0.532066 | 8.1:-7842166 | None:intergenic |
| GATTCTTCTATTACACTGAT+CGG | 0.533821 | 8.1:+7841423 | MS.gene68606:CDS |
| TAAATTAGAAGATGTTGCCA+TGG | 0.541216 | 8.1:+7844266 | MS.gene68606:CDS |
| TGGCACCAAAACCAACAAAA+CGG | 0.544787 | 8.1:+7841076 | MS.gene68606:CDS |
| AAATAACTTTGAGCGCCGAA+TGG | 0.546477 | 8.1:+7842517 | MS.gene68606:CDS |
| AAGTGCTTTCCAGCCTCAAA+GGG | 0.551248 | 8.1:+7843221 | MS.gene68606:CDS |
| AGTTCTATGTGCACTTTCTG+AGG | 0.553560 | 8.1:-7842116 | None:intergenic |
| AAATTAGAAGATGTTGCCAT+GGG | 0.554916 | 8.1:+7844267 | MS.gene68606:CDS |
| CCACATTTGATACATGTCAC+AGG | 0.555339 | 8.1:+7841099 | MS.gene68606:CDS |
| CCATCTGAAGGCCTCTTGTA+CGG | 0.556208 | 8.1:+7843247 | MS.gene68606:CDS |
| TCTTTAATAGAATCATTTGG+TGG | 0.557042 | 8.1:-7841006 | None:intergenic |
| TGGATTGAACAATTTAGGAA+TGG | 0.558371 | 8.1:+7844294 | MS.gene68606:CDS |
| TTATAATGCAAGATAATTGG+AGG | 0.560890 | 8.1:-7841516 | None:intergenic |
| GTTTATTGAAAATGAAGAAG+TGG | 0.561747 | 8.1:+7840860 | None:intergenic |
| GAGGAAAGATGCCCTGCTCA+TGG | 0.566659 | 8.1:+7841621 | MS.gene68606:CDS |
| CTCAAAGGGAAGCCATCTGA+AGG | 0.569898 | 8.1:+7843235 | MS.gene68606:CDS |
| CACATGATACGTACCCACCA+TGG | 0.571594 | 8.1:+7843475 | MS.gene68606:CDS |
| TTCATATGACTGTAAATGGA+AGG | 0.574417 | 8.1:+7842203 | MS.gene68606:CDS |
| ATTTACGTTTGTTGCTGTCG+AGG | 0.575180 | 8.1:+7841190 | MS.gene68606:CDS |
| AATAGCTCAAGGAGTTAAAG+AGG | 0.578574 | 8.1:+7841230 | MS.gene68606:CDS |
| CGATGCAGAATCTTGAACCA+TGG | 0.589458 | 8.1:+7842327 | MS.gene68606:intron |
| ACATGATACGTACCCACCAT+GGG | 0.589834 | 8.1:+7843476 | MS.gene68606:CDS |
| CAGGACCATGTGCCCATGGT+GGG | 0.590057 | 8.1:-7843488 | None:intergenic |
| TATCCAGGACCATGTGCCCA+TGG | 0.590642 | 8.1:-7843492 | None:intergenic |
| TACAGCCTCATATTGCATCC+AGG | 0.592681 | 8.1:-7842552 | None:intergenic |
| TTCATTATGAGAATGATGAG+AGG | 0.592883 | 8.1:+7844328 | MS.gene68606:CDS |
| ATCACACTGGATCTCCCTTG+TGG | 0.593261 | 8.1:+7841390 | MS.gene68606:CDS |
| TTGCGCATTATCAAAATCCA+AGG | 0.595140 | 8.1:+7844385 | MS.gene68606:CDS |
| ACGTACCCACCATGGGCACA+TGG | 0.599828 | 8.1:+7843483 | MS.gene68606:CDS |
| CACATTTGATACATGTCACA+GGG | 0.607371 | 8.1:+7841100 | MS.gene68606:CDS |
| TTAATCGTGCTGACTAACCA+TGG | 0.610947 | 8.1:-7842344 | None:intergenic |
| AAGATATTAGACCGTACAAG+AGG | 0.616932 | 8.1:-7843258 | None:intergenic |
| AAAATGAAGAAGTGGTATGG+AGG | 0.619161 | 8.1:+7840868 | None:intergenic |
| AGTTAATCTTGAATTATGGA+CGG | 0.620195 | 8.1:+7842886 | MS.gene68606:CDS |
| AGCTGGACAAGAGCTAGAAG+AGG | 0.621403 | 8.1:+7841485 | MS.gene68606:CDS |
| CCAGGACCATGTGCCCATGG+TGG | 0.623499 | 8.1:-7843489 | None:intergenic |
| CCGTACAAGAGGCCTTCAGA+TGG | 0.626770 | 8.1:-7843247 | None:intergenic |
| GAATCTACGACCAAACCACA+AGG | 0.628470 | 8.1:-7841405 | None:intergenic |
| TTGTTCAATCCATATGCCCA+TGG | 0.632568 | 8.1:-7844283 | None:intergenic |
| AGCGCCGAATGGCTCTGAGG+AGG | 0.634744 | 8.1:+7842528 | MS.gene68606:CDS |
| GCATTATCAAAATCCAAGGA+TGG | 0.638592 | 8.1:+7844389 | MS.gene68606:CDS |
| TCGAAGATTAGTAAGATAGA+CGG | 0.641292 | 8.1:+7841303 | MS.gene68606:CDS |
| GACAGATAGTGAAATCACAC+TGG | 0.646133 | 8.1:+7841377 | MS.gene68606:CDS |
| GGTTCTGCTAACATCCGCAA+AGG | 0.648279 | 8.1:+7841642 | MS.gene68606:CDS |
| TGTTAGCAGAACCATGAGCA+GGG | 0.651531 | 8.1:-7841632 | None:intergenic |
| GAGGTCCTGGATGCAATATG+AGG | 0.652896 | 8.1:+7842547 | MS.gene68606:CDS |
| TTGAGCGCCGAATGGCTCTG+AGG | 0.661301 | 8.1:+7842525 | MS.gene68606:CDS |
| GCTTTGCCCGAAATAGCTCA+AGG | 0.661971 | 8.1:+7841219 | MS.gene68606:CDS |
| ATAGGGATAAGGACAGCAAG+TGG | 0.679605 | 8.1:+7843296 | MS.gene68606:CDS |
| TTCTGACCCAACCCACAATG+TGG | 0.693365 | 8.1:-7842176 | None:intergenic |
| TGTTGATGTTGAGAACCTGA+AGG | 0.697040 | 8.1:+7842439 | MS.gene68606:CDS |
| CCTGTGACATGTATCAAATG+TGG | 0.710894 | 8.1:-7841099 | None:intergenic |
| CAAGTGGTACATCAGTGACG+AGG | 0.722140 | 8.1:+7843312 | MS.gene68606:CDS |
| AATCTACGACCAAACCACAA+GGG | 0.735183 | 8.1:-7841404 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAATTAAATAATTGGAA+TGG | + | chr8.1:7842279-7842298 | MS.gene68606:intron | 10.0% |
| !! | AAACTATAATAATCAACAAA+AGG | - | chr8.1:7842944-7842963 | None:intergenic | 15.0% |
| !! | ACTGCTAAAAATTAAATAAT+TGG | + | chr8.1:7842274-7842293 | MS.gene68606:intron | 15.0% |
| !! | TTAATGTCATCTTAAAATTT+GGG | - | chr8.1:7843824-7843843 | None:intergenic | 15.0% |
| !! | TTTAATGTCATCTTAAAATT+TGG | - | chr8.1:7843825-7843844 | None:intergenic | 15.0% |
| !!! | ATTTTTTTAGCACAATAAAA+TGG | + | chr8.1:7842679-7842698 | MS.gene68606:intron | 15.0% |
| !!! | TCATTATCTTATGTTATTTT+AGG | + | chr8.1:7843446-7843465 | MS.gene68606:intron | 15.0% |
| !!! | TTTTCTTTAATAGAATCATT+TGG | - | chr8.1:7841012-7841031 | None:intergenic | 15.0% |
| !! | AAATAAAATTCAGCAGTTAA+TGG | - | chr8.1:7844225-7844244 | None:intergenic | 20.0% |
| !! | ACATTATAATGCAAGATAAT+TGG | - | chr8.1:7841522-7841541 | None:intergenic | 20.0% |
| !! | ATAGAGTTAATCTTGAATTA+TGG | + | chr8.1:7842882-7842901 | MS.gene68606:CDS | 20.0% |
| !! | ATTATAACAAAACTTCATGA+TGG | - | chr8.1:7843600-7843619 | None:intergenic | 20.0% |
| !! | ATTTCAAGGATATATCTTAA+GGG | + | chr8.1:7843629-7843648 | MS.gene68606:intron | 20.0% |
| !! | ATTTGATTCCTCTTAAAATT+TGG | - | chr8.1:7844035-7844054 | None:intergenic | 20.0% |
| !! | CTGAAAATGAACTTATAAAT+GGG | + | chr8.1:7843963-7843982 | MS.gene68606:intron | 20.0% |
| !! | GAAAAATAAAAATTTATGGG+AGG | - | chr8.1:7843420-7843439 | None:intergenic | 20.0% |
| !! | TAAAAGAATTGGAACTTAAA+TGG | + | chr8.1:7844095-7844114 | MS.gene68606:intron | 20.0% |
| !! | TATTTCAAGGATATATCTTA+AGG | + | chr8.1:7843628-7843647 | MS.gene68606:intron | 20.0% |
| !! | TCGACAAAAATATAAAATGT+TGG | - | chr8.1:7842310-7842329 | None:intergenic | 20.0% |
| !! | TCTGAAAATGAACTTATAAA+TGG | + | chr8.1:7843962-7843981 | MS.gene68606:intron | 20.0% |
| !! | TGAAAATGAACTTATAAATG+GGG | + | chr8.1:7843964-7843983 | MS.gene68606:intron | 20.0% |
| !! | TTATAACAAAACTTCATGAT+GGG | - | chr8.1:7843599-7843618 | None:intergenic | 20.0% |
| !!! | AAAAATCACATATTTCTAGT+TGG | - | chr8.1:7841786-7841805 | None:intergenic | 20.0% |
| !!! | ATCTTATGTTATTTTAGGAA+TGG | + | chr8.1:7843451-7843470 | MS.gene68606:intron | 20.0% |
| !!! | CATGTATTTTGAACAATATA+CGG | - | chr8.1:7841576-7841595 | None:intergenic | 20.0% |
| !!! | GAAGTTTTGTTATAATCTTT+CGG | + | chr8.1:7843604-7843623 | MS.gene68606:intron | 20.0% |
| !!! | TTAATATCACAAATTTTCCT+GGG | + | chr8.1:7844060-7844079 | MS.gene68606:intron | 20.0% |
| !!! | TTTTCATGATGTATTTAGAA+GGG | - | chr8.1:7843171-7843190 | None:intergenic | 20.0% |
| ! | ACAAGAGAGGAATAATTTAA+AGG | - | chr8.1:7842812-7842831 | None:intergenic | 25.0% |
| ! | ACCACTTATGTTAAAAGAAT+TGG | + | chr8.1:7844084-7844103 | MS.gene68606:intron | 25.0% |
| ! | AGTTAATCTTGAATTATGGA+CGG | + | chr8.1:7842886-7842905 | MS.gene68606:CDS | 25.0% |
| ! | ATAATCTTTCGGATATTTCA+AGG | + | chr8.1:7843615-7843634 | MS.gene68606:intron | 25.0% |
| ! | ATAGAAGAAAAATGCAATGA+TGG | - | chr8.1:7844170-7844189 | None:intergenic | 25.0% |
| ! | ATTAAGAGTCTCAAATTGAT+TGG | + | chr8.1:7843930-7843949 | MS.gene68606:intron | 25.0% |
| ! | ATTCCTCTTAAAATTTGGAT+CGG | - | chr8.1:7844030-7844049 | None:intergenic | 25.0% |
| ! | CGTATATTGTTCAAAATACA+TGG | + | chr8.1:7841574-7841593 | MS.gene68606:CDS | 25.0% |
| ! | CTTAAATATGTATTCGCAAA+AGG | + | chr8.1:7844136-7844155 | MS.gene68606:intron | 25.0% |
| ! | GAAAATGAACTTATAAATGG+GGG | + | chr8.1:7843965-7843984 | MS.gene68606:intron | 25.0% |
| ! | TCTTTAATAGAATCATTTGG+TGG | - | chr8.1:7841009-7841028 | None:intergenic | 25.0% |
| ! | TTATAATGCAAGATAATTGG+AGG | - | chr8.1:7841519-7841538 | None:intergenic | 25.0% |
| ! | TTGCTATAATATTGAATGCA+TGG | - | chr8.1:7842780-7842799 | None:intergenic | 25.0% |
| !! | AATATGTGATTTTTATGTCG+AGG | + | chr8.1:7841792-7841811 | MS.gene68606:intron | 25.0% |
| !! | ACAATTGCAATTTGCATTTT+GGG | + | chr8.1:7842977-7842996 | MS.gene68606:CDS | 25.0% |
| !! | ATGAAACATCTTTTGCATAT+AGG | + | chr8.1:7842227-7842246 | MS.gene68606:CDS | 25.0% |
| !! | CTTAATATCACAAATTTTCC+TGG | + | chr8.1:7844059-7844078 | MS.gene68606:intron | 25.0% |
| !! | GTTTATTTGTTAGTTAATGC+TGG | + | chr8.1:7843048-7843067 | MS.gene68606:intron | 25.0% |
| !! | GTTTTCATGATGTATTTAGA+AGG | - | chr8.1:7843172-7843191 | None:intergenic | 25.0% |
| !! | TCCAATTCTTTTAACATAAG+TGG | - | chr8.1:7844088-7844107 | None:intergenic | 25.0% |
| !! | TGAAACATCTTTTGCATATA+GGG | + | chr8.1:7842228-7842247 | MS.gene68606:CDS | 25.0% |
| !!! | AAGCAGTGATTTTTATTTAG+TGG | + | chr8.1:7843076-7843095 | MS.gene68606:intron | 25.0% |
| !!! | AATCAACAAAAGGCATTAAT+TGG | - | chr8.1:7842934-7842953 | None:intergenic | 25.0% |
| !!! | ATGCAATTATAATGGACAAA+AGG | + | chr8.1:7841755-7841774 | MS.gene68606:intron | 25.0% |
| AAAACCTAACAAAAACCCAT+TGG | + | chr8.1:7843842-7843861 | MS.gene68606:intron | 30.0% | |
| AAAATTCAGCAGTTAATGGA+AGG | - | chr8.1:7844221-7844240 | None:intergenic | 30.0% | |
| AAACCTAACAAAAACCCATT+GGG | + | chr8.1:7843843-7843862 | MS.gene68606:intron | 30.0% | |
| AAACTGCACTCAAGAATAAA+AGG | - | chr8.1:7841942-7841961 | None:intergenic | 30.0% | |
| AAATTAGAAGATGTTGCCAT+GGG | + | chr8.1:7844267-7844286 | MS.gene68606:CDS | 30.0% | |
| AACAAAACATAATCCAAGCT+AGG | - | chr8.1:7841846-7841865 | None:intergenic | 30.0% | |
| ACAAAATGAGTTCATAAGTG+GGG | + | chr8.1:7843749-7843768 | MS.gene68606:intron | 30.0% | |
| AGATTTGTAATGGTTGAGTT+AGG | + | chr8.1:7843793-7843812 | MS.gene68606:intron | 30.0% | |
| ATAGCAAAATTCGTTGTCTT+TGG | + | chr8.1:7843531-7843550 | MS.gene68606:CDS | 30.0% | |
| ATATCATTATCTTCCGTAAC+AGG | - | chr8.1:7842416-7842435 | None:intergenic | 30.0% | |
| ATTGAACAATTTAGGAATGG+TGG | + | chr8.1:7844297-7844316 | MS.gene68606:CDS | 30.0% | |
| CAACAATCAAGTAAAGTATG+CGG | - | chr8.1:7843685-7843704 | None:intergenic | 30.0% | |
| CAATGAATGTTGTACTTGTT+TGG | + | chr8.1:7841163-7841182 | MS.gene68606:CDS | 30.0% | |
| CACAAAATGAGTTCATAAGT+GGG | + | chr8.1:7843748-7843767 | MS.gene68606:intron | 30.0% | |
| GATTCTTCTATTACACTGAT+CGG | + | chr8.1:7841423-7841442 | MS.gene68606:CDS | 30.0% | |
| GCATACTTTACTTGATTGTT+GGG | + | chr8.1:7843684-7843703 | MS.gene68606:intron | 30.0% | |
| GGATTTCATATGACTGTAAA+TGG | + | chr8.1:7842199-7842218 | MS.gene68606:CDS | 30.0% | |
| TAAATTAGAAGATGTTGCCA+TGG | + | chr8.1:7844266-7844285 | MS.gene68606:CDS | 30.0% | |
| TAACTCAACCATTACAAATC+TGG | - | chr8.1:7843794-7843813 | None:intergenic | 30.0% | |
| TACCTAAAGCCATGATAAAA+AGG | - | chr8.1:7840894-7840913 | None:intergenic | 30.0% | |
| TAGCACAATAAAATGGCAAT+AGG | + | chr8.1:7842686-7842705 | MS.gene68606:intron | 30.0% | |
| TCATGCTAAATATACCTTTG+CGG | - | chr8.1:7841659-7841678 | None:intergenic | 30.0% | |
| TCGAAGATTAGTAAGATAGA+CGG | + | chr8.1:7841303-7841322 | MS.gene68606:CDS | 30.0% | |
| TCGTTTGCATGCAATTATAA+TGG | + | chr8.1:7841747-7841766 | MS.gene68606:intron | 30.0% | |
| TGGATTGAACAATTTAGGAA+TGG | + | chr8.1:7844294-7844313 | MS.gene68606:CDS | 30.0% | |
| TGTCATCTTAAAATTTGGGT+TGG | - | chr8.1:7843820-7843839 | None:intergenic | 30.0% | |
| TTCATATGACTGTAAATGGA+AGG | + | chr8.1:7842203-7842222 | MS.gene68606:CDS | 30.0% | |
| TTCATTATGAGAATGATGAG+AGG | + | chr8.1:7844328-7844347 | MS.gene68606:CDS | 30.0% | |
| TTCCTCTTAAAATTTGGATC+GGG | - | chr8.1:7844029-7844048 | None:intergenic | 30.0% | |
| TTTAACTCCTTGAGCTATTT+CGG | - | chr8.1:7841229-7841248 | None:intergenic | 30.0% | |
| TTTAAGTCTGTTATCAGTTC+TGG | + | chr8.1:7842379-7842398 | MS.gene68606:CDS | 30.0% | |
| TTTATAATTCGAACCTAGCT+TGG | + | chr8.1:7841830-7841849 | MS.gene68606:intron | 30.0% | |
| TTTCTACTGTACAGTCTTAA+AGG | + | chr8.1:7840922-7840941 | MS.gene68606:CDS | 30.0% | |
| ! | AACAAAACAAGCCTTTTTCT+AGG | - | chr8.1:7842476-7842495 | None:intergenic | 30.0% |
| ! | AATTGCAATTTGCATTTTGG+GGG | + | chr8.1:7842979-7842998 | MS.gene68606:CDS | 30.0% |
| ! | ACAAAACAAGCCTTTTTCTA+GGG | - | chr8.1:7842475-7842494 | None:intergenic | 30.0% |
| ! | AGAACAGTTTTTAACAAGAG+AGG | - | chr8.1:7842825-7842844 | None:intergenic | 30.0% |
| ! | CAATTGCAATTTGCATTTTG+GGG | + | chr8.1:7842978-7842997 | MS.gene68606:CDS | 30.0% |
| ! | CTTCTATTCATCTTGCTATA+TGG | + | chr8.1:7844183-7844202 | MS.gene68606:intron | 30.0% |
| ! | CTTTCTGAGGAAATATTAGA+AGG | - | chr8.1:7842106-7842125 | None:intergenic | 30.0% |
| ! | GACAATTGCAATTTGCATTT+TGG | + | chr8.1:7842976-7842995 | MS.gene68606:CDS | 30.0% |
| ! | GCATATGGATTGAACAATTT+AGG | + | chr8.1:7844289-7844308 | MS.gene68606:CDS | 30.0% |
| ! | GTCATCTTAAAATTTGGGTT+GGG | - | chr8.1:7843819-7843838 | None:intergenic | 30.0% |
| !! | TTACTTTGAGTTTTCTTTCC+TGG | - | chr8.1:7843560-7843579 | None:intergenic | 30.0% |
| !!! | AAAAGGCTTGTTTTGTTGAT+CGG | + | chr8.1:7842479-7842498 | MS.gene68606:CDS | 30.0% |
| !!! | AATACATGGACTAGTGATTT+TGG | + | chr8.1:7841588-7841607 | MS.gene68606:CDS | 30.0% |
| !!! | AATGGACAGTTTTGATTTTC+TGG | - | chr8.1:7841330-7841349 | None:intergenic | 30.0% |
| !!! | ATACATGGACTAGTGATTTT+GGG | + | chr8.1:7841589-7841608 | MS.gene68606:CDS | 30.0% |
| !!! | ATGGACAGTTTTGATTTTCT+GGG | - | chr8.1:7841329-7841348 | None:intergenic | 30.0% |
| !!! | TTGAGTGCAGTTTTTTATGA+GGG | + | chr8.1:7841949-7841968 | MS.gene68606:intron | 30.0% |
| AAGATATTAGACCGTACAAG+AGG | - | chr8.1:7843261-7843280 | None:intergenic | 35.0% | |
| AATAGCTCAAGGAGTTAAAG+AGG | + | chr8.1:7841230-7841249 | MS.gene68606:CDS | 35.0% | |
| CAAAATGAGTTCATAAGTGG+GGG | + | chr8.1:7843750-7843769 | MS.gene68606:intron | 35.0% | |
| CACATTTGATACATGTCACA+GGG | + | chr8.1:7841100-7841119 | MS.gene68606:CDS | 35.0% | |
| CATCAACTACATCATAGAGT+TGG | - | chr8.1:7842003-7842022 | None:intergenic | 35.0% | |
| CATTATAATGTGAGTCTTCC+TGG | + | chr8.1:7841531-7841550 | MS.gene68606:CDS | 35.0% | |
| CCACAAAATGAGTTCATAAG+TGG | + | chr8.1:7843747-7843766 | MS.gene68606:intron | 35.0% | |
| CGCATACTTTACTTGATTGT+TGG | + | chr8.1:7843683-7843702 | MS.gene68606:intron | 35.0% | |
| CTCAAATTGATTGGATGAGA+AGG | + | chr8.1:7843939-7843958 | MS.gene68606:intron | 35.0% | |
| CTTACAAGCCAGATTTGTAA+TGG | + | chr8.1:7843783-7843802 | MS.gene68606:intron | 35.0% | |
| GCATTATCAAAATCCAAGGA+TGG | + | chr8.1:7844389-7844408 | MS.gene68606:CDS | 35.0% | |
| GGACTTATCTCATCAAATGT+GGG | - | chr8.1:7843729-7843748 | None:intergenic | 35.0% | |
| GTCTATCTTACTAATCTTCG+AGG | - | chr8.1:7841304-7841323 | None:intergenic | 35.0% | |
| TACCATCTTCATTCCTTAGT+AGG | + | chr8.1:7841870-7841889 | MS.gene68606:intron | 35.0% | |
| TCAATCCTTACAAAACCGTA+AGG | - | chr8.1:7844000-7844019 | None:intergenic | 35.0% | |
| TGCAAGATAATTGGAGGATT+TGG | - | chr8.1:7841513-7841532 | None:intergenic | 35.0% | |
| TGGACTTATCTCATCAAATG+TGG | - | chr8.1:7843730-7843749 | None:intergenic | 35.0% | |
| TTCTAAGTCATCTCCTGATA+GGG | + | chr8.1:7843279-7843298 | MS.gene68606:CDS | 35.0% | |
| TTGCGCATTATCAAAATCCA+AGG | + | chr8.1:7844385-7844404 | MS.gene68606:CDS | 35.0% | |
| TTTACTTGATTGTTGGGACT+GGG | + | chr8.1:7843690-7843709 | MS.gene68606:intron | 35.0% | |
| TTTCGATGCAGATCAGAAAA+TGG | + | chr8.1:7841056-7841075 | MS.gene68606:CDS | 35.0% | |
| ! | AACATCTTTTGCATATAGGG+AGG | + | chr8.1:7842231-7842250 | MS.gene68606:CDS | 35.0% |
| ! | AAGCTACTGTTTTGTCCATT+AGG | - | chr8.1:7841453-7841472 | None:intergenic | 35.0% |
| ! | ACAAAACTTCATGATGGGAA+AGG | - | chr8.1:7843594-7843613 | None:intergenic | 35.0% |
| ! | AGCTACTGTTTTGTCCATTA+GGG | - | chr8.1:7841452-7841471 | None:intergenic | 35.0% |
| ! | CAGATGATGATGCTTTCATA+AGG | + | chr8.1:7843191-7843210 | MS.gene68606:CDS | 35.0% |
| ! | CATATAGGGAGGTATGATAT+AGG | + | chr8.1:7842242-7842261 | MS.gene68606:intron | 35.0% |
| ! | CATTACAAATCTGGCTTGTA+AGG | - | chr8.1:7843785-7843804 | None:intergenic | 35.0% |
| ! | CCACTTATGAACTCATTTTG+TGG | - | chr8.1:7843750-7843769 | None:intergenic | 35.0% |
| ! | GTTGCTGTCAGATTTTTCAT+TGG | + | chr8.1:7842587-7842606 | MS.gene68606:CDS | 35.0% |
| ! | TGCTAATTTCCCTTTTTCTG+AGG | + | chr8.1:7842138-7842157 | MS.gene68606:CDS | 35.0% |
| ! | TTAACTCCTTGAGCTATTTC+GGG | - | chr8.1:7841228-7841247 | None:intergenic | 35.0% |
| ! | TTTATGAGGGAAGCTTTTAG+TGG | + | chr8.1:7841962-7841981 | MS.gene68606:intron | 35.0% |
| ! | TTTTAACATAAGTGGTTCCC+AGG | - | chr8.1:7844080-7844099 | None:intergenic | 35.0% |
| !! | AAAGGATTAGCCTCAGAAAA+AGG | - | chr8.1:7842151-7842170 | None:intergenic | 35.0% |
| !! | AAGGATTAGCCTCAGAAAAA+GGG | - | chr8.1:7842150-7842169 | None:intergenic | 35.0% |
| !! | CTCGTATTAGAAGTGTCAAA+AGG | + | chr8.1:7843656-7843675 | MS.gene68606:intron | 35.0% |
| !! | GGTTTTGTAAGGATTGAGTT+AGG | + | chr8.1:7844003-7844022 | MS.gene68606:intron | 35.0% |
| !! | TAGAATCATTTGGTGGTGAA+TGG | - | chr8.1:7841002-7841021 | None:intergenic | 35.0% |
| !!! | CTTGAGTGCAGTTTTTTATG+AGG | + | chr8.1:7841948-7841967 | MS.gene68606:intron | 35.0% |
| AACTACATTAGCAACACCTC+AGG | + | chr8.1:7841900-7841919 | MS.gene68606:intron | 40.0% | |
| AAGCAAGATAGCATAACCTG+AGG | - | chr8.1:7841919-7841938 | None:intergenic | 40.0% | |
| AATCTACGACCAAACCACAA+GGG | - | chr8.1:7841407-7841426 | None:intergenic | 40.0% | |
| AGCCTACTAAGGAATGAAGA+TGG | - | chr8.1:7841875-7841894 | None:intergenic | 40.0% | |
| AGTTCTATGTGCACTTTCTG+AGG | - | chr8.1:7842119-7842138 | None:intergenic | 40.0% | |
| CACTCACTATTGGAACACTT+GGG | + | chr8.1:7843867-7843886 | MS.gene68606:intron | 40.0% | |
| CCACATTTGATACATGTCAC+AGG | + | chr8.1:7841099-7841118 | MS.gene68606:CDS | 40.0% | |
| CCTGTGACATGTATCAAATG+TGG | - | chr8.1:7841102-7841121 | None:intergenic | 40.0% | |
| CTTCTAAGTCATCTCCTGAT+AGG | + | chr8.1:7843278-7843297 | MS.gene68606:CDS | 40.0% | |
| CTTTACTTGATTGTTGGGAC+TGG | + | chr8.1:7843689-7843708 | MS.gene68606:intron | 40.0% | |
| GACAGATAGTGAAATCACAC+TGG | + | chr8.1:7841377-7841396 | MS.gene68606:CDS | 40.0% | |
| GGCTAAAGGTTTACCTGTTA+CGG | + | chr8.1:7842400-7842419 | MS.gene68606:CDS | 40.0% | |
| GGGTTAAGACTGTTAGAGTA+TGG | - | chr8.1:7842732-7842751 | None:intergenic | 40.0% | |
| GTAGTTACTACAGCCTACTA+AGG | - | chr8.1:7841886-7841905 | None:intergenic | 40.0% | |
| TGGCACCAAAACCAACAAAA+CGG | + | chr8.1:7841076-7841095 | MS.gene68606:CDS | 40.0% | |
| TGTCATTGTCTTGCCAAGTT+TGG | - | chr8.1:7841361-7841380 | None:intergenic | 40.0% | |
| TGTTGATGTTGAGAACCTGA+AGG | + | chr8.1:7842439-7842458 | MS.gene68606:CDS | 40.0% | |
| TTAAAGAGGCTTCTGTAGCT+TGG | + | chr8.1:7841244-7841263 | MS.gene68606:CDS | 40.0% | |
| TTAGTCCACACTACAGCATT+TGG | - | chr8.1:7842756-7842775 | None:intergenic | 40.0% | |
| TTGTTCAATCCATATGCCCA+TGG | - | chr8.1:7844286-7844305 | None:intergenic | 40.0% | |
| TTTCTGATCTGCATCGAAAG+AGG | - | chr8.1:7841055-7841074 | None:intergenic | 40.0% | |
| ! | AAACTTCATGATGGGAAAGG+AGG | - | chr8.1:7843591-7843610 | None:intergenic | 40.0% |
| ! | ATCTCTGTCATGTTTTCTCC+AGG | - | chr8.1:7841552-7841571 | None:intergenic | 40.0% |
| ! | ATTTACGTTTGTTGCTGTCG+AGG | + | chr8.1:7841190-7841209 | MS.gene68606:CDS | 40.0% |
| ! | CTGTTATCAGTTCTGGCTAA+AGG | + | chr8.1:7842386-7842405 | MS.gene68606:CDS | 40.0% |
| ! | GATGAGAGGTTTTACAATGC+TGG | + | chr8.1:7844342-7844361 | MS.gene68606:CDS | 40.0% |
| ! | GGCCTTTTTATCATGGCTTT+AGG | + | chr8.1:7840889-7840908 | MS.gene68606:CDS | 40.0% |
| ! | GTATGGAGGCCTTTTTATCA+TGG | + | chr8.1:7840882-7840901 | MS.gene68606:CDS | 40.0% |
| ! | TTGATCGGAGTATTCTCTAC+CGG | + | chr8.1:7842494-7842513 | MS.gene68606:CDS | 40.0% |
| !! | AAATAACTTTGAGCGCCGAA+TGG | + | chr8.1:7842517-7842536 | MS.gene68606:CDS | 40.0% |
| !! | AAGGATGGTGTTATGCCTTT+GGG | + | chr8.1:7844404-7844423 | MS.gene68606:CDS | 40.0% |
| !! | ATCAAATGTGGCCGTTTTGT+TGG | - | chr8.1:7841090-7841109 | None:intergenic | 40.0% |
| !! | CTTTGAGTTTTCTTTCCTGG+TGG | - | chr8.1:7843557-7843576 | None:intergenic | 40.0% |
| !! | TCTCACCTTACGGTTTTGTA+AGG | + | chr8.1:7843992-7844011 | MS.gene68606:intron | 40.0% |
| !! | TGTTTTGCTGACTGCTTTTG+TGG | - | chr8.1:7840955-7840974 | None:intergenic | 40.0% |
| !! | TTAATCGTGCTGACTAACCA+TGG | - | chr8.1:7842347-7842366 | None:intergenic | 40.0% |
| !!! | ATGGACTAGTGATTTTGGGT+GGG | + | chr8.1:7841593-7841612 | MS.gene68606:CDS | 40.0% |
| AAGATGTTGCCATGGGCATA+TGG | + | chr8.1:7844274-7844293 | MS.gene68606:CDS | 45.0% | |
| AAGTGCTTTCCAGCCTCAAA+GGG | + | chr8.1:7843221-7843240 | MS.gene68606:CDS | 45.0% | |
| ACACTCCATATGTCCAGTCT+TGG | + | chr8.1:7843892-7843911 | MS.gene68606:intron | 45.0% | |
| ACATGATACGTACCCACCAT+GGG | + | chr8.1:7843476-7843495 | MS.gene68606:CDS | 45.0% | |
| AGCTTTCAGATTGAGCTAGC+TGG | + | chr8.1:7841468-7841487 | MS.gene68606:CDS | 45.0% | |
| ATAGGGATAAGGACAGCAAG+TGG | + | chr8.1:7843296-7843315 | MS.gene68606:CDS | 45.0% | |
| ATATGTCATACGCCCAAGAC+TGG | - | chr8.1:7843908-7843927 | None:intergenic | 45.0% | |
| ATCCTTTCACTGCCACATTG+TGG | + | chr8.1:7842164-7842183 | MS.gene68606:CDS | 45.0% | |
| ATGTTAGCAGAACCATGAGC+AGG | - | chr8.1:7841636-7841655 | None:intergenic | 45.0% | |
| CAATATGAGGCTGTACGTTC+TGG | + | chr8.1:7842560-7842579 | MS.gene68606:CDS | 45.0% | |
| CACTCCATATGTCCAGTCTT+GGG | + | chr8.1:7843893-7843912 | MS.gene68606:intron | 45.0% | |
| CCAAGTGTTCCAATAGTGAG+TGG | - | chr8.1:7843869-7843888 | None:intergenic | 45.0% | |
| CCAAGTTTGGTCACAGAGAA+TGG | - | chr8.1:7841348-7841367 | None:intergenic | 45.0% | |
| CCACTCACTATTGGAACACT+TGG | + | chr8.1:7843866-7843885 | MS.gene68606:intron | 45.0% | |
| CCATTCTCTGTGACCAAACT+TGG | + | chr8.1:7841345-7841364 | MS.gene68606:CDS | 45.0% | |
| CGATGCAGAATCTTGAACCA+TGG | + | chr8.1:7842327-7842346 | MS.gene68606:intron | 45.0% | |
| CTCATCAAATGTGGGACTCT+TGG | - | chr8.1:7843721-7843740 | None:intergenic | 45.0% | |
| CTCCAGCTATCCCTAGAAAA+AGG | + | chr8.1:7842462-7842481 | MS.gene68606:CDS | 45.0% | |
| CTTTCTGCAGTTTCTCCCAA+AGG | - | chr8.1:7844422-7844441 | None:intergenic | 45.0% | |
| GAATCTACGACCAAACCACA+AGG | - | chr8.1:7841408-7841427 | None:intergenic | 45.0% | |
| GTCAGCACGATTAAAGTAGC+AGG | + | chr8.1:7842353-7842372 | MS.gene68606:CDS | 45.0% | |
| GTCATCTCCTGATAGGGATA+AGG | + | chr8.1:7843285-7843304 | MS.gene68606:CDS | 45.0% | |
| TACAGCCTCATATTGCATCC+AGG | - | chr8.1:7842555-7842574 | None:intergenic | 45.0% | |
| TCCACACTACAGCATTTGGT+GGG | - | chr8.1:7842752-7842771 | None:intergenic | 45.0% | |
| TCCTTTCACTGCCACATTGT+GGG | + | chr8.1:7842165-7842184 | MS.gene68606:CDS | 45.0% | |
| TCGCGAGATATGACATATCC+AGG | - | chr8.1:7843510-7843529 | None:intergenic | 45.0% | |
| TGTTAGCAGAACCATGAGCA+GGG | - | chr8.1:7841635-7841654 | None:intergenic | 45.0% | |
| TTGCTGTCCTTATCCCTATC+AGG | - | chr8.1:7843295-7843314 | None:intergenic | 45.0% | |
| ! | CAAAGGCATAACACCATCCT+TGG | - | chr8.1:7844405-7844424 | None:intergenic | 45.0% |
| ! | GGCCCGATCCAAATTTTAAG+AGG | + | chr8.1:7844024-7844043 | MS.gene68606:intron | 45.0% |
| ! | TCGGCGCTCAAAGTTATTTC+CGG | - | chr8.1:7842516-7842535 | None:intergenic | 45.0% |
| !! | AGCCTTTTTCTAGGGATAGC+TGG | - | chr8.1:7842467-7842486 | None:intergenic | 45.0% |
| !! | CAAGGATGGTGTTATGCCTT+TGG | + | chr8.1:7844403-7844422 | MS.gene68606:CDS | 45.0% |
| !! | TGGCCCAATGGGTTTTTGTT+AGG | - | chr8.1:7843849-7843868 | None:intergenic | 45.0% |
| !!! | CATGGACTAGTGATTTTGGG+TGG | + | chr8.1:7841592-7841611 | MS.gene68606:CDS | 45.0% |
| !!! | TGGACTAGTGATTTTGGGTG+GGG | + | chr8.1:7841594-7841613 | MS.gene68606:CDS | 45.0% |
| !!! | TGTGGCCGTTTTGTTGGTTT+TGG | - | chr8.1:7841084-7841103 | None:intergenic | 45.0% |
| !! | AATAGAAAAATAAAAATTTA+TGG | - | chr8.1:7843424-7843443 | None:intergenic | 5.0% |
| !! | ATAGAAAAATAAAAATTTAT+GGG | - | chr8.1:7843423-7843442 | None:intergenic | 5.0% |
| !! | TAAAAAATAAATAACAAATA+AGG | - | chr8.1:7843130-7843149 | None:intergenic | 5.0% |
| ACACACACACACACACACAC+AGG | - | chr8.1:7843344-7843363 | None:intergenic | 50.0% | |
| ACACTGATCGGCATCCCTAA+TGG | + | chr8.1:7841435-7841454 | MS.gene68606:CDS | 50.0% | |
| ACCCACAATGTGGCAGTGAA+AGG | - | chr8.1:7842169-7842188 | None:intergenic | 50.0% | |
| ACCCACCAAATGCTGTAGTG+TGG | + | chr8.1:7842748-7842767 | MS.gene68606:intron | 50.0% | |
| ACTGGATCTCCCTTGTGGTT+TGG | + | chr8.1:7841395-7841414 | MS.gene68606:CDS | 50.0% | |
| AGCTGGACAAGAGCTAGAAG+AGG | + | chr8.1:7841485-7841504 | MS.gene68606:CDS | 50.0% | |
| ATCACACTGGATCTCCCTTG+TGG | + | chr8.1:7841390-7841409 | MS.gene68606:CDS | 50.0% | |
| ATTCGTTGTCTTTGGCCACC+AGG | + | chr8.1:7843539-7843558 | MS.gene68606:CDS | 50.0% | |
| CAAGTGGTACATCAGTGACG+AGG | + | chr8.1:7843312-7843331 | MS.gene68606:CDS | 50.0% | |
| CACATGATACGTACCCACCA+TGG | + | chr8.1:7843475-7843494 | MS.gene68606:CDS | 50.0% | |
| CCAATAGTGAGTGGCCCAAT+GGG | - | chr8.1:7843860-7843879 | None:intergenic | 50.0% | |
| CCATCTGAAGGCCTCTTGTA+CGG | + | chr8.1:7843247-7843266 | MS.gene68606:CDS | 50.0% | |
| CTCAAAGGGAAGCCATCTGA+AGG | + | chr8.1:7843235-7843254 | MS.gene68606:CDS | 50.0% | |
| CTTCAGATGGCTTCCCTTTG+AGG | - | chr8.1:7843237-7843256 | None:intergenic | 50.0% | |
| GAGGTCCTGGATGCAATATG+AGG | + | chr8.1:7842547-7842566 | MS.gene68606:CDS | 50.0% | |
| GCTTTGCCCGAAATAGCTCA+AGG | + | chr8.1:7841219-7841238 | MS.gene68606:CDS | 50.0% | |
| GGTTCTGCTAACATCCGCAA+AGG | + | chr8.1:7841642-7841661 | MS.gene68606:CDS | 50.0% | |
| GTCCACACTACAGCATTTGG+TGG | - | chr8.1:7842753-7842772 | None:intergenic | 50.0% | |
| TACGCCCAAGACTGGACATA+TGG | - | chr8.1:7843900-7843919 | None:intergenic | 50.0% | |
| TCACTGCCACATTGTGGGTT+GGG | + | chr8.1:7842170-7842189 | MS.gene68606:CDS | 50.0% | |
| TCCAATAGTGAGTGGCCCAA+TGG | - | chr8.1:7843861-7843880 | None:intergenic | 50.0% | |
| TGGACGGAAGCTCAAGCATA+TGG | + | chr8.1:7842902-7842921 | MS.gene68606:CDS | 50.0% | |
| TTCACTGCCACATTGTGGGT+TGG | + | chr8.1:7842169-7842188 | MS.gene68606:CDS | 50.0% | |
| TTCTGACCCAACCCACAATG+TGG | - | chr8.1:7842179-7842198 | None:intergenic | 50.0% | |
| ! | GAAGTGCTTTCCAGCCTCAA+AGG | + | chr8.1:7843220-7843239 | MS.gene68606:CDS | 50.0% |
| !! | ACATTGTGGGTTGGGTCAGA+AGG | + | chr8.1:7842178-7842197 | MS.gene68606:CDS | 50.0% |
| !! | GGACTAGTGATTTTGGGTGG+GGG | + | chr8.1:7841595-7841614 | MS.gene68606:CDS | 50.0% |
| !! | TGATTTTGGGTGGGGGAAAG+AGG | + | chr8.1:7841602-7841621 | MS.gene68606:CDS | 50.0% |
| AGGACCTCCTCAGAGCCATT+CGG | - | chr8.1:7842535-7842554 | None:intergenic | 55.0% | |
| CCCATTGGGCCACTCACTAT+TGG | + | chr8.1:7843857-7843876 | MS.gene68606:intron | 55.0% | |
| CCGTACAAGAGGCCTTCAGA+TGG | - | chr8.1:7843250-7843269 | None:intergenic | 55.0% | |
| GAGGAAAGATGCCCTGCTCA+TGG | + | chr8.1:7841621-7841640 | MS.gene68606:CDS | 55.0% | |
| TAGGGATAGCTGGAGCCTTC+AGG | - | chr8.1:7842457-7842476 | None:intergenic | 55.0% | |
| TATCCAGGACCATGTGCCCA+TGG | - | chr8.1:7843495-7843514 | None:intergenic | 55.0% | |
| TGGGGGCAGTTCTCACCTTA+CGG | + | chr8.1:7843982-7844001 | MS.gene68606:intron | 55.0% | |
| !! | AGATGGCTTCCCTTTGAGGC+TGG | - | chr8.1:7843233-7843252 | None:intergenic | 55.0% |
| ACGTACCCACCATGGGCACA+TGG | + | chr8.1:7843483-7843502 | MS.gene68606:CDS | 60.0% | |
| CAGGACCATGTGCCCATGGT+GGG | - | chr8.1:7843491-7843510 | None:intergenic | 60.0% | |
| !! | GAATGGCTCTGAGGAGGTCC+TGG | + | chr8.1:7842534-7842553 | MS.gene68606:CDS | 60.0% |
| !! | TTGAGCGCCGAATGGCTCTG+AGG | + | chr8.1:7842525-7842544 | MS.gene68606:CDS | 60.0% |
| CCACCATGGGCACATGGTCC+TGG | + | chr8.1:7843489-7843508 | MS.gene68606:CDS | 65.0% | |
| CCAGGACCATGTGCCCATGG+TGG | - | chr8.1:7843492-7843511 | None:intergenic | 65.0% | |
| !! | AGCGCCGAATGGCTCTGAGG+AGG | + | chr8.1:7842528-7842547 | MS.gene68606:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 7840871 | 7844467 | 7840871 | ID=MS.gene68606 |
| chr8.1 | mRNA | 7840871 | 7844467 | 7840871 | ID=MS.gene68606.t1;Parent=MS.gene68606 |
| chr8.1 | exon | 7840871 | 7841663 | 7840871 | ID=MS.gene68606.t1.exon1;Parent=MS.gene68606.t1 |
| chr8.1 | CDS | 7840871 | 7841663 | 7840871 | ID=cds.MS.gene68606.t1;Parent=MS.gene68606.t1 |
| chr8.1 | exon | 7842017 | 7842252 | 7842017 | ID=MS.gene68606.t1.exon2;Parent=MS.gene68606.t1 |
| chr8.1 | CDS | 7842017 | 7842252 | 7842017 | ID=cds.MS.gene68606.t1;Parent=MS.gene68606.t1 |
| chr8.1 | exon | 7842335 | 7842613 | 7842335 | ID=MS.gene68606.t1.exon3;Parent=MS.gene68606.t1 |
| chr8.1 | CDS | 7842335 | 7842613 | 7842335 | ID=cds.MS.gene68606.t1;Parent=MS.gene68606.t1 |
| chr8.1 | exon | 7842872 | 7843000 | 7842872 | ID=MS.gene68606.t1.exon4;Parent=MS.gene68606.t1 |
| chr8.1 | CDS | 7842872 | 7843000 | 7842872 | ID=cds.MS.gene68606.t1;Parent=MS.gene68606.t1 |
| chr8.1 | exon | 7843157 | 7843333 | 7843157 | ID=MS.gene68606.t1.exon5;Parent=MS.gene68606.t1 |
| chr8.1 | CDS | 7843157 | 7843333 | 7843157 | ID=cds.MS.gene68606.t1;Parent=MS.gene68606.t1 |
| chr8.1 | exon | 7843468 | 7843575 | 7843468 | ID=MS.gene68606.t1.exon6;Parent=MS.gene68606.t1 |
| chr8.1 | CDS | 7843468 | 7843575 | 7843468 | ID=cds.MS.gene68606.t1;Parent=MS.gene68606.t1 |
| chr8.1 | exon | 7844261 | 7844467 | 7844261 | ID=MS.gene68606.t1.exon7;Parent=MS.gene68606.t1 |
| chr8.1 | CDS | 7844261 | 7844467 | 7844261 | ID=cds.MS.gene68606.t1;Parent=MS.gene68606.t1 |
| Gene Sequence |
| Protein sequence |
