Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061262.t1 | XP_024638509.1 | 98.6 | 803 | 11 | 0 | 1 | 803 | 1 | 803 | 0.00E+00 | 1580.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061262.t1 | A0A396IFK0 | 98.6 | 803 | 11 | 0 | 1 | 803 | 1 | 803 | 0.0e+00 | 1580.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene061262 | MS.gene74232 | 0.805777 | 1.13E-49 | -1.69E-46 |
| MS.gene061262 | MS.gene90781 | 0.800337 | 1.51E-48 | -1.69E-46 |
| MS.gene061262 | MS.gene93175 | 0.803793 | 2.94E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061262.t1 | AT4G16180 | 75.095 | 791 | 192 | 3 | 16 | 801 | 27 | 817 | 0.0 | 1250 |
| MS.gene061262.t1 | AT4G16180 | 71.660 | 247 | 70 | 0 | 16 | 262 | 27 | 273 | 1.02e-129 | 388 |
Find 177 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTGGACAGCTTGCTTCTT+TGG | 0.182055 | 8.3:-6403840 | MS.gene061262:CDS |
| TGCAACTTACAGTCTGATTT+TGG | 0.229934 | 8.3:-6404758 | MS.gene061262:intron |
| GGGCAAGAAGTAGTAATTAT+TGG | 0.234310 | 8.3:-6402229 | MS.gene061262:CDS |
| GGAGATCTTCAACCAACTTT+TGG | 0.251497 | 8.3:-6401509 | MS.gene061262:CDS |
| GGCAAGAAGTAGTAATTATT+GGG | 0.268633 | 8.3:-6402228 | MS.gene061262:CDS |
| TCTTCTCAAACGTACATCTA+TGG | 0.277365 | 8.3:-6399155 | MS.gene061262:CDS |
| ATTATATGATCATCGGTTAA+AGG | 0.290124 | 8.3:-6399439 | MS.gene061262:CDS |
| TACTTAAGCATAAGCCTCTT+TGG | 0.290880 | 8.3:-6401586 | MS.gene061262:CDS |
| TCAGCAGGGCCCTGTACTTA+TGG | 0.292984 | 8.3:-6403971 | MS.gene061262:CDS |
| ATGGAAACGGCCATCATTCT+TGG | 0.294606 | 8.3:+6402126 | None:intergenic |
| AGATCTATTCCCTTGAGTTT+AGG | 0.312681 | 8.3:+6404307 | None:intergenic |
| TATAAACATCGACGAAATTA+AGG | 0.318071 | 8.3:-6402414 | MS.gene061262:CDS |
| TCGTCCTCCATCATAAGATT+TGG | 0.323360 | 8.3:+6400832 | None:intergenic |
| TTCTCCTTCTTTCTCTTCAC+AGG | 0.328276 | 8.3:+6399685 | None:intergenic |
| GACCTATTGTGAATTGGCTT+TGG | 0.331999 | 8.3:-6400049 | MS.gene061262:CDS |
| TGCTGCTGGATTGCTTGAAA+TGG | 0.339263 | 8.3:-6401684 | MS.gene061262:CDS |
| CCCACAACATTTCGTAATCT+TGG | 0.341529 | 8.3:+6403905 | None:intergenic |
| TGTTCATACCAAGACTTATC+TGG | 0.350299 | 8.3:-6402104 | MS.gene061262:CDS |
| TCTGCTGATGTGCTTGCTGC+TGG | 0.356573 | 8.3:-6401698 | MS.gene061262:CDS |
| AATATTTCCTCCGACAGAAT+TGG | 0.362704 | 8.3:-6401640 | MS.gene061262:CDS |
| TCAAGCACAACGTCATATAT+TGG | 0.374254 | 8.3:-6400138 | MS.gene061262:CDS |
| AATTCACAATAGGTCTTTCA+TGG | 0.376401 | 8.3:+6400057 | None:intergenic |
| ATGAAAGACCTATTGTGAAT+TGG | 0.376566 | 8.3:-6400055 | MS.gene061262:CDS |
| ATGGAGCATGCGGCGAATAT+CGG | 0.377215 | 8.3:+6406437 | None:intergenic |
| ACCTATTGTGAATTGGCTTT+GGG | 0.382620 | 8.3:-6400048 | MS.gene061262:CDS |
| GATCTTGATAGTTTAATGTA+TGG | 0.388701 | 8.3:-6404289 | MS.gene061262:CDS |
| ACACGAATTAGTTGAGCGTT+TGG | 0.389031 | 8.3:-6399596 | MS.gene061262:CDS |
| TCGATACAATATTATGCAAA+AGG | 0.395938 | 8.3:-6402450 | MS.gene061262:CDS |
| ACATGAGATGTATTTGAAAA+TGG | 0.403371 | 8.3:+6400002 | None:intergenic |
| GTGGAGGAGCAACTCAAGTT+TGG | 0.404844 | 8.3:-6404192 | MS.gene061262:CDS |
| ATGTTATAGCACCTGATGTT+AGG | 0.406301 | 8.3:-6403799 | MS.gene061262:intron |
| ATTCATTGTAAACTTTGATA+AGG | 0.406785 | 8.3:-6404600 | MS.gene061262:intron |
| TCTTGATATTGAGCATCATT+TGG | 0.407751 | 8.3:-6406147 | MS.gene061262:CDS |
| TCAACTAATTCGTGTGGAAA+TGG | 0.411947 | 8.3:+6399604 | None:intergenic |
| TATGATGGAGGACGAAAGTA+TGG | 0.412196 | 8.3:-6400824 | MS.gene061262:CDS |
| GTGGTCATTGACCTTTCAGC+AGG | 0.413376 | 8.3:-6403986 | MS.gene061262:CDS |
| GCAGCCGGTTGTCATCCATT+TGG | 0.416805 | 8.3:-6400026 | MS.gene061262:CDS |
| ATGAATATTGCACTTGGCAC+TGG | 0.420692 | 8.3:+6404617 | None:intergenic |
| AATTCGTGTGGAAATGGTTC+AGG | 0.422803 | 8.3:+6399610 | None:intergenic |
| ATTTATCGTTATCGCTATGA+TGG | 0.423220 | 8.3:-6404214 | MS.gene061262:CDS |
| GTGACCGGGTTCTCTCTTGA+AGG | 0.423230 | 8.3:+6406509 | None:intergenic |
| AATATTTATTTGAAAGAGAT+GGG | 0.423391 | 8.3:+6401657 | None:intergenic |
| ACTACTCTTGTTCCAAAAGT+TGG | 0.423682 | 8.3:+6401497 | None:intergenic |
| CAACATTTCGTAATCTTGGC+AGG | 0.426960 | 8.3:+6403909 | None:intergenic |
| AACTCAAGTTTGGCTGAGCT+CGG | 0.436422 | 8.3:-6404182 | MS.gene061262:CDS |
| TTCAATCTTACCATAAGTAC+AGG | 0.437599 | 8.3:+6403961 | None:intergenic |
| AAATATTTATTTGAAAGAGA+TGG | 0.441835 | 8.3:+6401656 | None:intergenic |
| ATATCTTCCTCAGTTAGCTC+AGG | 0.461761 | 8.3:+6404259 | None:intergenic |
| GGTTCTCTCTTGAAGGGTTG+TGG | 0.461949 | 8.3:+6406516 | None:intergenic |
| GTTGCTTCAACTTCAAATAG+AGG | 0.463738 | 8.3:+6404725 | None:intergenic |
| CTTCTCAAACGTACATCTAT+GGG | 0.466572 | 8.3:-6399154 | MS.gene061262:CDS |
| ACTTCCAACGGAACTTGAAA+CGG | 0.472686 | 8.3:+6406299 | None:intergenic |
| GAGTACAGCATTTGAAATAC+TGG | 0.474444 | 8.3:+6404692 | None:intergenic |
| AAGGCGCTGTGGTGCCATTG+AGG | 0.476011 | 8.3:+6406486 | None:intergenic |
| AAATGGTTCAGGCAAATTAG+TGG | 0.478339 | 8.3:+6399621 | None:intergenic |
| GTGGTGCCATTGAGGGTGAC+CGG | 0.481637 | 8.3:+6406494 | None:intergenic |
| TGGTCCAAATGGATGACAAC+CGG | 0.482753 | 8.3:+6400022 | None:intergenic |
| TGCTATCAGTTCAGGCTGTC+CGG | 0.483583 | 8.3:+6404930 | None:intergenic |
| ACATGAGAAGCCTTCACATA+TGG | 0.491265 | 8.3:+6400080 | None:intergenic |
| GTATTTGAAAATGGTCCAAA+TGG | 0.494802 | 8.3:+6400011 | None:intergenic |
| GTGAATTGGCTTTGGGCAGC+CGG | 0.498237 | 8.3:-6400041 | MS.gene061262:CDS |
| GAGAACCCGGTCACCCTCAA+TGG | 0.498355 | 8.3:-6406500 | MS.gene061262:CDS |
| GCCCAAAGCCAATTCACAAT+AGG | 0.498822 | 8.3:+6400047 | None:intergenic |
| ACTCAAGTTTGGCTGAGCTC+GGG | 0.501574 | 8.3:-6404181 | MS.gene061262:CDS |
| TTCTATGCGCAGACCGTCCA+AGG | 0.501965 | 8.3:-6399745 | MS.gene061262:intron |
| CTTCATTATTATATGATCAT+CGG | 0.502242 | 8.3:-6399446 | MS.gene061262:CDS |
| CGATACAATATTATGCAAAA+GGG | 0.502596 | 8.3:-6402449 | MS.gene061262:CDS |
| AGGAAGAATGTAAAGAAACT+AGG | 0.505233 | 8.3:-6401530 | MS.gene061262:CDS |
| AGGCGCTGTGGTGCCATTGA+GGG | 0.506245 | 8.3:+6406487 | None:intergenic |
| GTACTACCTCGGCGCGAGAA+TGG | 0.506864 | 8.3:+6406418 | None:intergenic |
| GAAGGGTTGTGGTGCTGACT+CGG | 0.509026 | 8.3:+6406527 | None:intergenic |
| GCTGGTATTGCCTCAGTGGT+GGG | 0.511543 | 8.3:-6400116 | MS.gene061262:CDS |
| GGCTGGTATTGCCTCAGTGG+TGG | 0.515630 | 8.3:-6400117 | MS.gene061262:CDS |
| TGGTGCCATTGAGGGTGACC+GGG | 0.521533 | 8.3:+6406495 | None:intergenic |
| GGTAAGATTGAAGCTGAAGA+GGG | 0.528998 | 8.3:-6403950 | MS.gene061262:CDS |
| CATATTTGACATGGATAGTG+TGG | 0.529423 | 8.3:-6404666 | MS.gene061262:CDS |
| TGACCGGGTTCTCTCTTGAA+GGG | 0.529854 | 8.3:+6406510 | None:intergenic |
| CATCGACGAAATTAAGGCAG+AGG | 0.529959 | 8.3:-6402408 | MS.gene061262:intron |
| ACTATCCATGTCAAATATGT+AGG | 0.533374 | 8.3:+6404670 | None:intergenic |
| AAAATGAAAAGATTCCTTTG+AGG | 0.535489 | 8.3:-6400762 | MS.gene061262:intron |
| CCCTCTCACTCGTCAAAACA+TGG | 0.536316 | 8.3:+6399222 | None:intergenic |
| GATACTCTGCTGCAAAACCT+TGG | 0.536916 | 8.3:+6399728 | None:intergenic |
| ATCAACCACTGAACTGTGGT+TGG | 0.537281 | 8.3:-6399662 | MS.gene061262:CDS |
| GCCAAGATTACGAAATGTTG+TGG | 0.539972 | 8.3:-6403906 | MS.gene061262:CDS |
| TTCTCTTCACAGGCTCACCA+AGG | 0.541736 | 8.3:+6399695 | None:intergenic |
| CTCTGCTGCAAAACCTTGGA+CGG | 0.543642 | 8.3:+6399732 | None:intergenic |
| CCAAGATTACGAAATGTTGT+GGG | 0.545962 | 8.3:-6403905 | MS.gene061262:CDS |
| ACATTACGTTACCTAACATC+AGG | 0.546612 | 8.3:+6403788 | None:intergenic |
| AAGTTTGGCTGAGCTCGGGC+AGG | 0.546912 | 8.3:-6404177 | MS.gene061262:intron |
| CGATGTTTATACTGTAATTG+TGG | 0.551351 | 8.3:+6402426 | None:intergenic |
| TGGTAAGATTGAAGCTGAAG+AGG | 0.552860 | 8.3:-6403951 | MS.gene061262:CDS |
| TCTCTTCACAGGCTCACCAA+GGG | 0.553205 | 8.3:+6399696 | None:intergenic |
| AATATCTGAACTGTTCAAGA+AGG | 0.553406 | 8.3:+6399413 | None:intergenic |
| GCACAACGTCATATATTGGC+TGG | 0.554553 | 8.3:-6400134 | MS.gene061262:CDS |
| TGTAGATCCAAATCTTATGA+TGG | 0.554966 | 8.3:-6400839 | MS.gene061262:CDS |
| AGCACCGTCCAGATAAGTCT+TGG | 0.555342 | 8.3:+6402096 | None:intergenic |
| GAATTGGATGGATGAATCTG+AGG | 0.555855 | 8.3:-6401624 | MS.gene061262:CDS |
| GAGACTAGATCCTAAACTCA+AGG | 0.557280 | 8.3:-6404317 | MS.gene061262:CDS |
| AAACAAGAAGGTCTATGAGT+AGG | 0.558501 | 8.3:+6406185 | None:intergenic |
| GGTATTGCCTCAGTGGTGGG+TGG | 0.558929 | 8.3:-6400113 | MS.gene061262:CDS |
| AAAAGCATTGAAAGAGGCAA+TGG | 0.561055 | 8.3:-6404902 | MS.gene061262:CDS |
| TGGTCATTGACCTTTCAGCA+GGG | 0.561594 | 8.3:-6403985 | MS.gene061262:CDS |
| AAAGAGGCAATGGTTCCTGC+AGG | 0.562165 | 8.3:-6404892 | MS.gene061262:CDS |
| ATCATATTCACCCACCTCAA+AGG | 0.562534 | 8.3:+6400748 | None:intergenic |
| AAGTACAGGGCCCTGCTGAA+AGG | 0.562990 | 8.3:+6403975 | None:intergenic |
| TCTTGGTATGAACATGGAAA+CGG | 0.563061 | 8.3:+6402113 | None:intergenic |
| TACGTTTGAGAAGAGTGCAC+AGG | 0.565869 | 8.3:+6399164 | None:intergenic |
| ACCTTCTTGTTTAGAGACTG+AGG | 0.566619 | 8.3:-6406174 | MS.gene061262:CDS |
| TCCTCAGTCTCTAAACAAGA+AGG | 0.567630 | 8.3:+6406173 | None:intergenic |
| TGCTTCTTTGGTATCAACCA+CGG | 0.571299 | 8.3:-6403828 | MS.gene061262:CDS |
| CCGCAATTGACAGCTTCTCA+TGG | 0.571441 | 8.3:+6402185 | None:intergenic |
| GGGATCTTCTGTTACAGAGA+TGG | 0.573024 | 8.3:-6404645 | MS.gene061262:CDS |
| GCAAGAAGTAGTAATTATTG+GGG | 0.574692 | 8.3:-6402227 | MS.gene061262:CDS |
| AGTTCCGTTGGAAGTGAATG+TGG | 0.576749 | 8.3:-6406291 | MS.gene061262:CDS |
| CTGCAGGAAACCAAGAATGA+TGG | 0.580092 | 8.3:-6402136 | MS.gene061262:CDS |
| GGTTCCGTTTCAAGTTCCGT+TGG | 0.580298 | 8.3:-6406303 | MS.gene061262:CDS |
| TATGACGTTGTGCTTGAGAT+GGG | 0.583156 | 8.3:+6400144 | None:intergenic |
| CCATGAGAAGCTGTCAATTG+CGG | 0.583948 | 8.3:-6402185 | MS.gene061262:CDS |
| TATGCGTGGACATTCACTGC+AGG | 0.586804 | 8.3:-6402152 | MS.gene061262:CDS |
| AGAAGCTGTTCTAATTTATG+CGG | 0.588014 | 8.3:+6406221 | None:intergenic |
| AAGTTATACGATGACCAAAG+AGG | 0.589182 | 8.3:+6401572 | None:intergenic |
| TGAAGTTGAAGCAACAGCTG+TGG | 0.589594 | 8.3:-6404717 | MS.gene061262:CDS |
| CGTTATCGCTATGATGGTGG+AGG | 0.589803 | 8.3:-6404208 | MS.gene061262:CDS |
| CAACCCTTCAAGAGAGAACC+CGG | 0.592024 | 8.3:-6406513 | MS.gene061262:CDS |
| TATCGTTATCGCTATGATGG+TGG | 0.594515 | 8.3:-6404211 | MS.gene061262:CDS |
| TTTACAATGAATATTGCACT+TGG | 0.597102 | 8.3:+6404611 | None:intergenic |
| AAAACCACATTCACTTCCAA+CGG | 0.597969 | 8.3:+6406287 | None:intergenic |
| TGGTTCCTGCAGGAAAAGCA+AGG | 0.598430 | 8.3:-6404882 | MS.gene061262:CDS |
| AATTGGATGGATGAATCTGA+GGG | 0.599284 | 8.3:-6401623 | MS.gene061262:CDS |
| AACTTACTGTTGGGTGAACA+TGG | 0.599343 | 8.3:+6399380 | None:intergenic |
| TTTCCTCCGACAGAATTGGA+TGG | 0.600443 | 8.3:-6401636 | MS.gene061262:CDS |
| AACATTTCGTAATCTTGGCA+GGG | 0.601560 | 8.3:+6403910 | None:intergenic |
| CGGCGCGAGAATGGAGCATG+CGG | 0.606929 | 8.3:+6406427 | None:intergenic |
| ATATGACGTTGTGCTTGAGA+TGG | 0.607427 | 8.3:+6400143 | None:intergenic |
| ATATTTGACATGGATAGTGT+GGG | 0.610210 | 8.3:-6404665 | MS.gene061262:CDS |
| CACTTACCAATGCAACATCA+CGG | 0.611354 | 8.3:+6399967 | None:intergenic |
| GCGGCGAATATCGGATCGGA+CGG | 0.611589 | 8.3:+6406446 | None:intergenic |
| AATGCTCCGTGATGTTGCAT+TGG | 0.612680 | 8.3:-6399973 | MS.gene061262:intron |
| CATGCTCCATTCTCGCGCCG+AGG | 0.613742 | 8.3:-6406424 | MS.gene061262:intron |
| TTCTCAAACGTACATCTATG+GGG | 0.615326 | 8.3:-6399153 | MS.gene061262:CDS |
| TTTAAGTGCACCATATGTGA+AGG | 0.615808 | 8.3:-6400090 | MS.gene061262:CDS |
| TGAGCCTGTGAAGAGAAAGA+AGG | 0.616853 | 8.3:-6399689 | MS.gene061262:CDS |
| CTCTTCACAGGCTCACCAAG+GGG | 0.617140 | 8.3:+6399697 | None:intergenic |
| ATTGGCTGGTATTGCCTCAG+TGG | 0.620183 | 8.3:-6400120 | MS.gene061262:CDS |
| GAGTATCTGAAAACTCCCCT+TGG | 0.620853 | 8.3:-6399712 | MS.gene061262:CDS |
| GGAATCACGAACATCGTGGA+AGG | 0.621338 | 8.3:+6406467 | None:intergenic |
| GATAAGTCTTGGTATGAACA+TGG | 0.622215 | 8.3:+6402107 | None:intergenic |
| TATCAACAAGATGCTCCTCA+AGG | 0.624161 | 8.3:+6399472 | None:intergenic |
| ATTCATCCATCCAATTCTGT+CGG | 0.631529 | 8.3:+6401630 | None:intergenic |
| AGACTAGATCCTAAACTCAA+GGG | 0.631701 | 8.3:-6404316 | MS.gene061262:CDS |
| CTTCTCCAACCACAGTTCAG+TGG | 0.631810 | 8.3:+6399657 | None:intergenic |
| CATCCATCCAATTCTGTCGG+AGG | 0.632207 | 8.3:+6401633 | None:intergenic |
| ATGTTTCAGAAATACAGAGA+AGG | 0.632392 | 8.3:-6400175 | MS.gene061262:CDS |
| AAACGCTCAACTAATTCGTG+TGG | 0.632525 | 8.3:+6399598 | None:intergenic |
| TAAAATTCGTGAAACATCAG+AGG | 0.633134 | 8.3:-6399833 | MS.gene061262:intron |
| GAACTCAATATATGCACGTG+TGG | 0.635853 | 8.3:-6399869 | MS.gene061262:CDS |
| GCGGTTTCAAAAGCTATGCG+TGG | 0.641027 | 8.3:-6402166 | MS.gene061262:CDS |
| GGACGGAATCACGAACATCG+TGG | 0.646802 | 8.3:+6406463 | None:intergenic |
| ATATGTTTACCAGGGCCTTG+AGG | 0.649877 | 8.3:-6399487 | MS.gene061262:intron |
| AGATCCAAATCTTATGATGG+AGG | 0.654539 | 8.3:-6400836 | MS.gene061262:CDS |
| GTACTCCTACATATTTGACA+TGG | 0.656913 | 8.3:-6404675 | MS.gene061262:CDS |
| GGTTCCTGCAGGAAAAGCAA+GGG | 0.658305 | 8.3:-6404881 | MS.gene061262:CDS |
| ACGTTTGAGAAGAGTGCACA+GGG | 0.661850 | 8.3:+6399165 | None:intergenic |
| GAACATCGTGGAAGGCGCTG+TGG | 0.666826 | 8.3:+6406475 | None:intergenic |
| TCCTGCAGGAAAAGCAAGGG+AGG | 0.667563 | 8.3:-6404878 | MS.gene061262:intron |
| TCTCAAACGTACATCTATGG+GGG | 0.668815 | 8.3:-6399152 | MS.gene061262:CDS |
| GCATGCGGCGAATATCGGAT+CGG | 0.676609 | 8.3:+6406442 | None:intergenic |
| AGAAATCAACCACTGAACTG+TGG | 0.695434 | 8.3:-6399666 | MS.gene061262:CDS |
| TCAATCTTACCATAAGTACA+GGG | 0.696608 | 8.3:+6403962 | None:intergenic |
| CATACCAAGACTTATCTGGA+CGG | 0.713323 | 8.3:-6402100 | MS.gene061262:CDS |
| TTCTTTGGTATCAACCACGG+TGG | 0.714616 | 8.3:-6403825 | MS.gene061262:CDS |
| TGCTATAACATGTTCCACCG+TGG | 0.734238 | 8.3:+6403811 | None:intergenic |
| TGGAGGACGAAAGTATGGTG+TGG | 0.738554 | 8.3:-6400819 | MS.gene061262:CDS |
| ATGAGTGTGATGATCGAACG+AGG | 0.741293 | 8.3:+6406579 | None:intergenic |
| CAAGAAGTAGTAATTATTGG+GGG | 0.747622 | 8.3:-6402226 | MS.gene061262:CDS |
| ACTTAAACCACCCACCACTG+AGG | 0.751621 | 8.3:+6400106 | None:intergenic |
| ATTGGATGGATGAATCTGAG+GGG | 0.770592 | 8.3:-6401622 | MS.gene061262:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 6399088 | 6406607 | 6399088 | ID=MS.gene061262 |
| chr8.3 | mRNA | 6399088 | 6406607 | 6399088 | ID=MS.gene061262.t1;Parent=MS.gene061262 |
| chr8.3 | exon | 6406425 | 6406607 | 6406425 | ID=MS.gene061262.t1.exon1;Parent=MS.gene061262.t1 |
| chr8.3 | CDS | 6406425 | 6406607 | 6406425 | ID=cds.MS.gene061262.t1;Parent=MS.gene061262.t1 |
| chr8.3 | exon | 6406130 | 6406324 | 6406130 | ID=MS.gene061262.t1.exon2;Parent=MS.gene061262.t1 |
| chr8.3 | CDS | 6406130 | 6406324 | 6406130 | ID=cds.MS.gene061262.t1;Parent=MS.gene061262.t1 |
| chr8.3 | exon | 6404879 | 6404953 | 6404879 | ID=MS.gene061262.t1.exon3;Parent=MS.gene061262.t1 |
| chr8.3 | CDS | 6404879 | 6404953 | 6404879 | ID=cds.MS.gene061262.t1;Parent=MS.gene061262.t1 |
| chr8.3 | exon | 6404601 | 6404768 | 6404601 | ID=MS.gene061262.t1.exon4;Parent=MS.gene061262.t1 |
| chr8.3 | CDS | 6404601 | 6404768 | 6404601 | ID=cds.MS.gene061262.t1;Parent=MS.gene061262.t1 |
| chr8.3 | exon | 6404178 | 6404341 | 6404178 | ID=MS.gene061262.t1.exon5;Parent=MS.gene061262.t1 |
| chr8.3 | CDS | 6404178 | 6404341 | 6404178 | ID=cds.MS.gene061262.t1;Parent=MS.gene061262.t1 |
| chr8.3 | exon | 6403800 | 6404012 | 6403800 | ID=MS.gene061262.t1.exon6;Parent=MS.gene061262.t1 |
| chr8.3 | CDS | 6403800 | 6404012 | 6403800 | ID=cds.MS.gene061262.t1;Parent=MS.gene061262.t1 |
| chr8.3 | exon | 6402409 | 6402535 | 6402409 | ID=MS.gene061262.t1.exon7;Parent=MS.gene061262.t1 |
| chr8.3 | CDS | 6402409 | 6402535 | 6402409 | ID=cds.MS.gene061262.t1;Parent=MS.gene061262.t1 |
| chr8.3 | exon | 6402084 | 6402272 | 6402084 | ID=MS.gene061262.t1.exon8;Parent=MS.gene061262.t1 |
| chr8.3 | CDS | 6402084 | 6402272 | 6402084 | ID=cds.MS.gene061262.t1;Parent=MS.gene061262.t1 |
| chr8.3 | exon | 6401491 | 6401732 | 6401491 | ID=MS.gene061262.t1.exon9;Parent=MS.gene061262.t1 |
| chr8.3 | CDS | 6401491 | 6401732 | 6401491 | ID=cds.MS.gene061262.t1;Parent=MS.gene061262.t1 |
| chr8.3 | exon | 6400763 | 6400882 | 6400763 | ID=MS.gene061262.t1.exon10;Parent=MS.gene061262.t1 |
| chr8.3 | CDS | 6400763 | 6400882 | 6400763 | ID=cds.MS.gene061262.t1;Parent=MS.gene061262.t1 |
| chr8.3 | exon | 6399974 | 6400199 | 6399974 | ID=MS.gene061262.t1.exon11;Parent=MS.gene061262.t1 |
| chr8.3 | CDS | 6399974 | 6400199 | 6399974 | ID=cds.MS.gene061262.t1;Parent=MS.gene061262.t1 |
| chr8.3 | exon | 6399834 | 6399893 | 6399834 | ID=MS.gene061262.t1.exon12;Parent=MS.gene061262.t1 |
| chr8.3 | CDS | 6399834 | 6399893 | 6399834 | ID=cds.MS.gene061262.t1;Parent=MS.gene061262.t1 |
| chr8.3 | exon | 6399582 | 6399755 | 6399582 | ID=MS.gene061262.t1.exon13;Parent=MS.gene061262.t1 |
| chr8.3 | CDS | 6399582 | 6399755 | 6399582 | ID=cds.MS.gene061262.t1;Parent=MS.gene061262.t1 |
| chr8.3 | exon | 6399387 | 6399496 | 6399387 | ID=MS.gene061262.t1.exon14;Parent=MS.gene061262.t1 |
| chr8.3 | CDS | 6399387 | 6399496 | 6399387 | ID=cds.MS.gene061262.t1;Parent=MS.gene061262.t1 |
| chr8.3 | exon | 6399088 | 6399253 | 6399088 | ID=MS.gene061262.t1.exon15;Parent=MS.gene061262.t1 |
| chr8.3 | CDS | 6399088 | 6399253 | 6399088 | ID=cds.MS.gene061262.t1;Parent=MS.gene061262.t1 |
| Gene Sequence |
| Protein sequence |
