Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90781.t1 | XP_003592804.1 | 98.2 | 608 | 10 | 1 | 1 | 608 | 1 | 607 | 0.00E+00 | 1213 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90781.t1 | Q9FY49 | 69.9 | 617 | 176 | 3 | 1 | 608 | 1 | 616 | 1.5e-253 | 876.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90781.t1 | G7IAW9 | 98.2 | 608 | 10 | 1 | 1 | 608 | 1 | 607 | 0.0e+00 | 1213.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05652 | MS.gene90781 | 0.820648 | 6.14E-53 | -1.69E-46 |
| MS.gene057669 | MS.gene90781 | 0.881432 | 2.41E-70 | -1.69E-46 |
| MS.gene060985 | MS.gene90781 | 0.805323 | 1.41E-49 | -1.69E-46 |
| MS.gene061262 | MS.gene90781 | 0.800337 | 1.51E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene90781 | MS.gene53697 | PPI |
| MS.gene90781 | MS.gene81617 | PPI |
| MS.gene90781 | MS.gene37911 | PPI |
| MS.gene90781 | MS.gene070503 | PPI |
| MS.gene90781 | MS.gene070507 | PPI |
| MS.gene90781 | MS.gene43378 | PPI |
| MS.gene070505 | MS.gene90781 | PPI |
| MS.gene057886 | MS.gene90781 | PPI |
| MS.gene90781 | MS.gene81620 | PPI |
| MS.gene90781 | MS.gene053466 | PPI |
| MS.gene90781 | MS.gene005385 | PPI |
| MS.gene90781 | MS.gene057883 | PPI |
| MS.gene90781 | MS.gene016758 | PPI |
| MS.gene90781 | MS.gene073910 | PPI |
| MS.gene90781 | MS.gene070492 | PPI |
| MS.gene90781 | MS.gene070510 | PPI |
| MS.gene90781 | MS.gene070511 | PPI |
| MS.gene81615 | MS.gene90781 | PPI |
| MS.gene90781 | MS.gene057884 | PPI |
| MS.gene90781 | MS.gene53545 | PPI |
| MS.gene81622 | MS.gene90781 | PPI |
| MS.gene90781 | MS.gene001273 | PPI |
| MS.gene90781 | MS.gene20954 | PPI |
| MS.gene016743 | MS.gene90781 | PPI |
| MS.gene016742 | MS.gene90781 | PPI |
| MS.gene90781 | MS.gene21091 | PPI |
| MS.gene90781 | MS.gene070509 | PPI |
| MS.gene90781 | MS.gene67840 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90781.t1 | MTR_1g116230 | 98.191 | 608 | 10 | 1 | 1 | 608 | 1 | 607 | 0.0 | 1243 |
| MS.gene90781.t1 | MTR_3g104720 | 27.577 | 359 | 209 | 14 | 120 | 455 | 128 | 458 | 1.91e-20 | 96.3 |
| MS.gene90781.t1 | MTR_8g018790 | 27.457 | 346 | 212 | 13 | 127 | 455 | 4 | 327 | 7.39e-19 | 91.3 |
| MS.gene90781.t1 | MTR_8g018790 | 26.989 | 352 | 218 | 12 | 121 | 455 | 131 | 460 | 9.16e-19 | 91.3 |
| MS.gene90781.t1 | MTR_3g104720 | 29.187 | 209 | 126 | 8 | 260 | 455 | 39 | 238 | 3.95e-13 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90781.t1 | AT5G13520 | 69.854 | 617 | 176 | 3 | 1 | 608 | 1 | 616 | 0.0 | 905 |
| MS.gene90781.t1 | AT4G33090 | 25.414 | 362 | 215 | 12 | 119 | 455 | 127 | 458 | 2.04e-20 | 96.3 |
Find 192 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCAGGGATGTTTGCTTTA+AGG | 0.143966 | 1.4:-88282905 | None:intergenic |
| CACCTTAACCTCATAATCTT+TGG | 0.221536 | 1.4:-88284698 | None:intergenic |
| ATCACAGCCGTCAATTCTTT+TGG | 0.251292 | 1.4:-88281019 | None:intergenic |
| CTGGCAAATGAGTCGGTAAA+TGG | 0.267595 | 1.4:+88283026 | MS.gene90781:CDS |
| AAGGACCAGAGTGAGGGTTT+TGG | 0.268631 | 1.4:-88280673 | None:intergenic |
| GATGATGATGATGAGTGTTT+TGG | 0.272847 | 1.4:+88281076 | MS.gene90781:CDS |
| AGCCATTAGGGTTTGTTATT+CGG | 0.287767 | 1.4:+88280982 | MS.gene90781:CDS |
| TTGACCCCGACGGTTATTAA+AGG | 0.309873 | 1.4:+88281397 | MS.gene90781:CDS |
| CTTCTTCCTCTGCTCTTCAA+TGG | 0.332406 | 1.4:+88280861 | MS.gene90781:CDS |
| ATGGGACTGAGGATATGATT+AGG | 0.334329 | 1.4:+88281269 | MS.gene90781:CDS |
| GCAAATAGGTAAGGTGGAAT+TGG | 0.334855 | 1.4:-88281145 | None:intergenic |
| GGGAGGTGGGGCCCAGGACT+AGG | 0.338745 | 1.4:+88281194 | MS.gene90781:CDS |
| AAAAGAGCCATGTTGAATAT+TGG | 0.341081 | 1.4:+88282383 | MS.gene90781:CDS |
| ATGGTTGGAGAGAGGGAAAA+AGG | 0.341656 | 1.4:-88280761 | None:intergenic |
| AGGGAAGGGGAAAGATTGTT+TGG | 0.345742 | 1.4:+88281289 | MS.gene90781:CDS |
| CTCTTCCACCACTCTACCTT+TGG | 0.353869 | 1.4:-88281107 | None:intergenic |
| CAGTTGGTGAGCTTGATAAC+AGG | 0.359790 | 1.4:+88281173 | MS.gene90781:CDS |
| TGAGAAGCTTCAATAGATTT+CGG | 0.360972 | 1.4:-88283119 | None:intergenic |
| TCAGGACACACCAGCCATTA+GGG | 0.369317 | 1.4:+88280970 | MS.gene90781:CDS |
| CATCAGGGTCAATTCCTTCC+TGG | 0.372777 | 1.4:-88282481 | None:intergenic |
| TGGGACTGAGGATATGATTA+GGG | 0.374830 | 1.4:+88281270 | MS.gene90781:CDS |
| GTCAGGACACACCAGCCATT+AGG | 0.375461 | 1.4:+88280969 | MS.gene90781:CDS |
| TCAACAACACCTTGAGCAAT+AGG | 0.378580 | 1.4:-88284910 | None:intergenic |
| GAGAAAACGTTAAAAGAAGT+TGG | 0.385521 | 1.4:+88284775 | MS.gene90781:CDS |
| TGACCCCGACGGTTATTAAA+GGG | 0.399260 | 1.4:+88281398 | MS.gene90781:CDS |
| ACCTGAGAATACACATCATC+AGG | 0.399303 | 1.4:-88282497 | None:intergenic |
| AGAGAGGTTCAAGGACAATA+TGG | 0.400955 | 1.4:+88282436 | MS.gene90781:CDS |
| GTGAGTTTAGAACCCTTGAT+TGG | 0.402646 | 1.4:-88280788 | None:intergenic |
| ATCCAAAGATTATGAGGTTA+AGG | 0.404774 | 1.4:+88284696 | MS.gene90781:CDS |
| ATCAATCGATTTGAACTTGA+AGG | 0.410059 | 1.4:-88282862 | None:intergenic |
| CCCTTGATTGGGTCGATGGT+TGG | 0.416580 | 1.4:-88280776 | None:intergenic |
| CACCAACTGCAAATGCAAAT+AGG | 0.418291 | 1.4:-88281159 | None:intergenic |
| AACTGGAAACCTTTCTCATA+TGG | 0.422788 | 1.4:-88282521 | None:intergenic |
| AGCAGAGGAAGAAGGGGAGG+TGG | 0.429072 | 1.4:-88280852 | None:intergenic |
| CTCATGAACTTGCTCATAGC+TGG | 0.429580 | 1.4:+88281446 | MS.gene90781:CDS |
| GTTCAATGCGCAACAAGAAC+TGG | 0.434717 | 1.4:-88282538 | None:intergenic |
| GAAATCTATTGAAGCTTCTC+AGG | 0.435996 | 1.4:+88283121 | MS.gene90781:CDS |
| TGCAACCGGTGCACAGGTTG+TGG | 0.437418 | 1.4:+88281423 | MS.gene90781:CDS |
| AGGGAAATGTGAGTGGTTGG+TGG | 0.443335 | 1.4:-88280593 | None:intergenic |
| TCAATCTTATTCTCTATGCC+AGG | 0.444219 | 1.4:-88282921 | None:intergenic |
| TCAGCTGCTAAAGAGTTTGA+TGG | 0.444601 | 1.4:+88281250 | MS.gene90781:CDS |
| CATCCCCTTTAATAACCGTC+GGG | 0.448553 | 1.4:-88281402 | None:intergenic |
| TGACATTGAGTATAGACAAA+AGG | 0.450662 | 1.4:-88280917 | None:intergenic |
| TGGTTGGAGGGGTTTAAATG+AGG | 0.452149 | 1.4:+88282409 | MS.gene90781:CDS |
| TATTGTGCAGGTCTTAGCCT+TGG | 0.452157 | 1.4:+88284651 | MS.gene90781:intron |
| GCCATGTTGAATATTGGAAT+TGG | 0.454549 | 1.4:+88282389 | MS.gene90781:CDS |
| TGAAGCTGCGACTCAATTGT+TGG | 0.455170 | 1.4:+88281225 | MS.gene90781:CDS |
| GTGGGAGAGATTTGATTTGT+TGG | 0.456341 | 1.4:+88281321 | MS.gene90781:CDS |
| TCAGGAGTGGGAGCTCTACT+TGG | 0.456702 | 1.4:+88283088 | MS.gene90781:CDS |
| TAAGGTGTCATTTCTCCAAC+GGG | 0.459712 | 1.4:+88284714 | MS.gene90781:CDS |
| GAAAACAGAACGGGCATGAA+TGG | 0.460537 | 1.4:-88280942 | None:intergenic |
| GTCTTATATACACTGGAGTC+GGG | 0.472504 | 1.4:-88282993 | None:intergenic |
| AGAACCCTTGATTGGGTCGA+TGG | 0.473280 | 1.4:-88280780 | None:intergenic |
| TCTCAGGTTCCATATGAGAA+AGG | 0.477154 | 1.4:+88282512 | MS.gene90781:CDS |
| CAGTGATGGAGTGGATTTCA+AGG | 0.477695 | 1.4:-88280715 | None:intergenic |
| TCCAACCATCGACCCAATCA+AGG | 0.478388 | 1.4:+88280775 | MS.gene90781:CDS |
| TTCAGAAACTCATCAAATGC+AGG | 0.480159 | 1.4:-88282825 | None:intergenic |
| CCCTGATGATGTGTATTCTC+AGG | 0.481874 | 1.4:+88282496 | MS.gene90781:CDS |
| TGAGTTTAGAACCCTTGATT+GGG | 0.483336 | 1.4:-88280787 | None:intergenic |
| AATATTGGAATTGGTTGGAG+GGG | 0.484685 | 1.4:+88282398 | MS.gene90781:CDS |
| ATCTGAATCCAAAGATTATG+AGG | 0.485915 | 1.4:+88284690 | MS.gene90781:CDS |
| ATAACAGGGAGGTGGGGCCC+AGG | 0.486872 | 1.4:+88281188 | MS.gene90781:CDS |
| GGCCGAATAACAAACCCTAA+TGG | 0.487856 | 1.4:-88280984 | None:intergenic |
| CATTGAAGAGCAGAGGAAGA+AGG | 0.494860 | 1.4:-88280860 | None:intergenic |
| GTTATTAAAGGGGATGCAAC+CGG | 0.495380 | 1.4:+88281409 | MS.gene90781:CDS |
| TGGGTCGATGGTTGGAGAGA+GGG | 0.496813 | 1.4:-88280768 | None:intergenic |
| GGATTGAGAAGGGTCAGTGA+TGG | 0.500891 | 1.4:-88280729 | None:intergenic |
| TCAGCAATTTCATCCTCCCT+TGG | 0.501574 | 1.4:-88283056 | None:intergenic |
| TGAGGATATGATTAGGGAAG+GGG | 0.503195 | 1.4:+88281276 | MS.gene90781:CDS |
| AATTGCTGAGTGGCAAGGTC+AGG | 0.503227 | 1.4:+88283070 | MS.gene90781:CDS |
| ATTGAAGAGCAGAGGAAGAA+GGG | 0.503299 | 1.4:-88280859 | None:intergenic |
| AGGGGATGCAACCGGTGCAC+AGG | 0.505859 | 1.4:+88281417 | MS.gene90781:CDS |
| GCATCCCCTTTAATAACCGT+CGG | 0.506180 | 1.4:-88281403 | None:intergenic |
| GACATTGAGTATAGACAAAA+GGG | 0.506303 | 1.4:-88280916 | None:intergenic |
| TTAGGGTTTGTTATTCGGCC+CGG | 0.506368 | 1.4:+88280987 | MS.gene90781:CDS |
| GAATGTTCCAAAAGAATTGA+CGG | 0.506622 | 1.4:+88281012 | MS.gene90781:CDS |
| GGAGGTGGGGCCCAGGACTA+GGG | 0.506704 | 1.4:+88281195 | MS.gene90781:CDS |
| TTCAGCATAAACCCTAGTCC+TGG | 0.507344 | 1.4:-88281206 | None:intergenic |
| AGGTGTGGTTAGAAAGAGTG+AGG | 0.507367 | 1.4:-88280811 | None:intergenic |
| TACCTATTTGCATTTGCAGT+TGG | 0.507637 | 1.4:+88281157 | MS.gene90781:CDS |
| TGTCTTATATACACTGGAGT+CGG | 0.511411 | 1.4:-88282994 | None:intergenic |
| GAGCTTGATAACAGGGAGGT+GGG | 0.512339 | 1.4:+88281181 | MS.gene90781:CDS |
| AAGAGCAGAGGAAGAAGGGG+AGG | 0.512487 | 1.4:-88280855 | None:intergenic |
| GTGTATGAGTGAGGATCAAC+GGG | 0.513328 | 1.4:-88280557 | None:intergenic |
| TGGCAAATGAGTCGGTAAAT+GGG | 0.513512 | 1.4:+88283027 | MS.gene90781:CDS |
| ATATAAGACAATTGTATCAC+TGG | 0.516027 | 1.4:+88283007 | MS.gene90781:CDS |
| TTATGCAGAGCGGAGGATTG+TGG | 0.516215 | 1.4:+88282343 | MS.gene90781:CDS |
| TTCACCAGTGCAGTGTAAAG+TGG | 0.517047 | 1.4:-88284817 | None:intergenic |
| GAACTTGCTCATAGCTGGAC+TGG | 0.520607 | 1.4:+88281451 | MS.gene90781:CDS |
| CGGTAAATGGGAGGATGCCA+AGG | 0.521443 | 1.4:+88283039 | MS.gene90781:CDS |
| GAACGAGTGTCGAGGAAGAA+AGG | 0.524067 | 1.4:-88280692 | None:intergenic |
| TTGGGTCGATGGTTGGAGAG+AGG | 0.527128 | 1.4:-88280769 | None:intergenic |
| TACCTTCTGTCCACAGTACA+AGG | 0.527979 | 1.4:-88282944 | None:intergenic |
| TTCCTTAAAGCAAACATCCC+TGG | 0.529774 | 1.4:+88282903 | MS.gene90781:CDS |
| TGTTGAATATTGGAATTGGT+TGG | 0.529933 | 1.4:+88282393 | MS.gene90781:CDS |
| CTCCAACGGGCTATTTCATG+CGG | 0.531241 | 1.4:+88284727 | MS.gene90781:CDS |
| CGTGGTGCGTCGCGAATCGT+TGG | 0.532581 | 1.4:+88281054 | MS.gene90781:CDS |
| GGATTCTCCATACCACCATA+AGG | 0.532655 | 1.4:-88281361 | None:intergenic |
| AGTGGTGGAAGAGTTTGAGA+TGG | 0.533645 | 1.4:+88281117 | MS.gene90781:CDS |
| CTGACAAGGGAAAACAGAAC+GGG | 0.534230 | 1.4:-88280951 | None:intergenic |
| GAAGCATGAATGGTTGAAGA+TGG | 0.537383 | 1.4:-88280635 | None:intergenic |
| AGCTTGATAACAGGGAGGTG+GGG | 0.541507 | 1.4:+88281182 | MS.gene90781:CDS |
| GGGATTGGAGTGGATTGAGA+AGG | 0.542508 | 1.4:-88280740 | None:intergenic |
| AGGATTGTGGAGGCTGTACA+AGG | 0.543120 | 1.4:+88282356 | MS.gene90781:CDS |
| TTAAGGTGTCATTTCTCCAA+CGG | 0.543544 | 1.4:+88284713 | MS.gene90781:CDS |
| ATACCACCATAAGGAAAACT+AGG | 0.544779 | 1.4:-88281352 | None:intergenic |
| CAGCTGCTAAAGAGTTTGAT+GGG | 0.545330 | 1.4:+88281251 | MS.gene90781:CDS |
| GAAGAGTGCAGAAGCATGAA+TGG | 0.547456 | 1.4:-88280645 | None:intergenic |
| CTGAGGATATGATTAGGGAA+GGG | 0.548838 | 1.4:+88281275 | MS.gene90781:CDS |
| GGGAAATGTGAGTGGTTGGT+GGG | 0.549128 | 1.4:-88280592 | None:intergenic |
| GAATATTGGAATTGGTTGGA+GGG | 0.549610 | 1.4:+88282397 | MS.gene90781:CDS |
| CCGTCCACTTTACACTGCAC+TGG | 0.552455 | 1.4:+88284813 | MS.gene90781:CDS |
| GTGAGGGAAATGTGAGTGGT+TGG | 0.552782 | 1.4:-88280596 | None:intergenic |
| CTTGTTGCGCATTGAACGTG+AGG | 0.557122 | 1.4:+88282544 | MS.gene90781:CDS |
| TCGGGCTCAAAAGCATCAGA+TGG | 0.557199 | 1.4:-88282975 | None:intergenic |
| GAATAACAAACCCTAATGGC+TGG | 0.558142 | 1.4:-88280980 | None:intergenic |
| AAAAGAATTGACGGCTGTGA+TGG | 0.558281 | 1.4:+88281021 | MS.gene90781:CDS |
| ATTGTTTGGAAATTATGAGT+GGG | 0.560386 | 1.4:+88281303 | MS.gene90781:CDS |
| AAACGTTAAAAGAAGTTGGA+AGG | 0.561275 | 1.4:+88284779 | MS.gene90781:CDS |
| TGAATATTGGAATTGGTTGG+AGG | 0.561291 | 1.4:+88282396 | MS.gene90781:CDS |
| GGATTGGAGTGGATTGAGAA+GGG | 0.561965 | 1.4:-88280739 | None:intergenic |
| TGAGGATGTAGAGAGGTTCA+AGG | 0.565967 | 1.4:+88282427 | MS.gene90781:CDS |
| GAGAAGGGTCAGTGATGGAG+TGG | 0.567983 | 1.4:-88280724 | None:intergenic |
| TGAGCTTGATAACAGGGAGG+TGG | 0.570830 | 1.4:+88281180 | MS.gene90781:CDS |
| GCAAATGCAAATAGGTAAGG+TGG | 0.574543 | 1.4:-88281151 | None:intergenic |
| TGTTTGCTTTAAGGAAGTCA+AGG | 0.574551 | 1.4:-88282896 | None:intergenic |
| GGTGGTGTAAGTGATGAGAA+AGG | 0.577397 | 1.4:-88280834 | None:intergenic |
| TGTTACCATCCTATTGCTCA+AGG | 0.578149 | 1.4:+88284901 | MS.gene90781:CDS |
| TTGAAGAGCAGAGGAAGAAG+GGG | 0.580264 | 1.4:-88280858 | None:intergenic |
| TACAATTGTCTTATATACAC+TGG | 0.582319 | 1.4:-88283000 | None:intergenic |
| CTGAGTGGCAAGGTCAGGAG+TGG | 0.584567 | 1.4:+88283075 | MS.gene90781:CDS |
| ATGAGCCACAACCTGTGCAC+CGG | 0.585437 | 1.4:-88281428 | None:intergenic |
| TGTATCACTGGCAAATGAGT+CGG | 0.586369 | 1.4:+88283019 | MS.gene90781:CDS |
| AGGAAGAAAGGACCAGAGTG+AGG | 0.587311 | 1.4:-88280680 | None:intergenic |
| GGAAATCTAAGTAGAGTGTG+AGG | 0.587348 | 1.4:-88280613 | None:intergenic |
| GTTTAAATGAGGATGTAGAG+AGG | 0.589075 | 1.4:+88282420 | MS.gene90781:CDS |
| GATTGTTTGGAAATTATGAG+TGG | 0.590199 | 1.4:+88281302 | MS.gene90781:CDS |
| AAGCATGAATGGTTGAAGAT+GGG | 0.591646 | 1.4:-88280634 | None:intergenic |
| ACTGAGGATATGATTAGGGA+AGG | 0.591906 | 1.4:+88281274 | MS.gene90781:CDS |
| ACTGCAAATGCAAATAGGTA+AGG | 0.591923 | 1.4:-88281154 | None:intergenic |
| TCAGCATAAACCCTAGTCCT+GGG | 0.593338 | 1.4:-88281205 | None:intergenic |
| TAGTTTGTAGCGTGAATCCA+AGG | 0.594849 | 1.4:-88284668 | None:intergenic |
| GACCTTGTACTGTGGACAGA+AGG | 0.594960 | 1.4:+88282942 | MS.gene90781:CDS |
| GGTGTGGTTAGAAAGAGTGA+GGG | 0.595482 | 1.4:-88280810 | None:intergenic |
| ATAAGATTGACCTTGTACTG+TGG | 0.602282 | 1.4:+88282934 | MS.gene90781:CDS |
| CAATCTTATTCTCTATGCCA+GGG | 0.602858 | 1.4:-88282920 | None:intergenic |
| GACCCCGACGGTTATTAAAG+GGG | 0.605150 | 1.4:+88281399 | MS.gene90781:CDS |
| ATGGCTGGTGTGTCCTGACA+AGG | 0.606492 | 1.4:-88280965 | None:intergenic |
| TATTGCTCAAGGTGTTGTTG+AGG | 0.607471 | 1.4:+88284912 | MS.gene90781:CDS |
| TAAGAGCCATTGAAGAGCAG+AGG | 0.607807 | 1.4:-88280867 | None:intergenic |
| GGTAAATGGGAGGATGCCAA+GGG | 0.608195 | 1.4:+88283040 | MS.gene90781:CDS |
| GGAAGAAAGGACCAGAGTGA+GGG | 0.608235 | 1.4:-88280679 | None:intergenic |
| GTACTGTGGACAGAAGGTAC+TGG | 0.608281 | 1.4:+88282948 | MS.gene90781:CDS |
| ATGGTGGTATGGAGAATCCA+AGG | 0.609099 | 1.4:+88281365 | MS.gene90781:CDS |
| GATGAAATTGCTGAGTGGCA+AGG | 0.610794 | 1.4:+88283065 | MS.gene90781:CDS |
| CAACACCTTGAGCAATAGGA+TGG | 0.611866 | 1.4:-88284906 | None:intergenic |
| ACTCTCCAAAACCCTCACTC+TGG | 0.614596 | 1.4:+88280668 | MS.gene90781:CDS |
| AATCGATTTGAACTTGAAGG+TGG | 0.615528 | 1.4:-88282859 | None:intergenic |
| CCTGACAAGGGAAAACAGAA+CGG | 0.627589 | 1.4:-88280952 | None:intergenic |
| AAATGGGAGGATGCCAAGGG+AGG | 0.627760 | 1.4:+88283043 | MS.gene90781:CDS |
| CCAACCATCGACCCAATCAA+GGG | 0.629595 | 1.4:+88280776 | MS.gene90781:CDS |
| TGTGTATGAGTGAGGATCAA+CGG | 0.632074 | 1.4:-88280558 | None:intergenic |
| CGGGCTCAAAAGCATCAGAT+GGG | 0.632935 | 1.4:-88282974 | None:intergenic |
| TTCGTCCAAAGGTAGAGTGG+TGG | 0.634737 | 1.4:+88281102 | MS.gene90781:CDS |
| TCACTACTTATGCAGAGCGG+AGG | 0.636175 | 1.4:+88282336 | MS.gene90781:CDS |
| AAGTGATGAGAAAGGAGGTG+TGG | 0.636386 | 1.4:-88280826 | None:intergenic |
| TGAGTGGCAAGGTCAGGAGT+GGG | 0.641061 | 1.4:+88283076 | MS.gene90781:CDS |
| GTTGAGTCTGTGTATGAGTG+AGG | 0.642736 | 1.4:-88280566 | None:intergenic |
| AGTTGGTGAGCTTGATAACA+GGG | 0.645497 | 1.4:+88281174 | MS.gene90781:CDS |
| CCTGAGAATACACATCATCA+GGG | 0.646341 | 1.4:-88282496 | None:intergenic |
| GAATTCGTCCAAAGGTAGAG+TGG | 0.646482 | 1.4:+88281099 | MS.gene90781:CDS |
| CAAAGCTTACTATAGCGAAG+TGG | 0.648966 | 1.4:+88284753 | MS.gene90781:CDS |
| AGTGATGGAGTGGATTTCAA+GGG | 0.649580 | 1.4:-88280714 | None:intergenic |
| CCAGTGCAGTGTAAAGTGGA+CGG | 0.649830 | 1.4:-88284813 | None:intergenic |
| GAGTGTGAGGGAAATGTGAG+TGG | 0.652886 | 1.4:-88280600 | None:intergenic |
| GAAATCTAAGTAGAGTGTGA+GGG | 0.656090 | 1.4:-88280612 | None:intergenic |
| TTTCAAGGGAACGAGTGTCG+AGG | 0.658695 | 1.4:-88280700 | None:intergenic |
| TAAAGAGTTTGATGGGACTG+AGG | 0.660055 | 1.4:+88281258 | MS.gene90781:CDS |
| TGCAGAGCGGAGGATTGTGG+AGG | 0.661106 | 1.4:+88282346 | MS.gene90781:CDS |
| ATCCCCTTTAATAACCGTCG+GGG | 0.664328 | 1.4:-88281401 | None:intergenic |
| ACCAATTCCAATATTCAACA+TGG | 0.671117 | 1.4:-88282390 | None:intergenic |
| CAAATGAGTCGGTAAATGGG+AGG | 0.681045 | 1.4:+88283030 | MS.gene90781:CDS |
| ATCCGCATGAAATAGCCCGT+TGG | 0.682282 | 1.4:-88284729 | None:intergenic |
| TGGCTGGTGTGTCCTGACAA+GGG | 0.699195 | 1.4:-88280964 | None:intergenic |
| GGTGTAAGTGATGAGAAAGG+AGG | 0.699630 | 1.4:-88280831 | None:intergenic |
| ACTGCACTGGTGAAAGACAG+TGG | 0.714971 | 1.4:+88284826 | MS.gene90781:CDS |
| TGGTATGGAGAATCCAAGGA+TGG | 0.719290 | 1.4:+88281369 | MS.gene90781:CDS |
| CCACCATAAGGAAAACTAGG+TGG | 0.722795 | 1.4:-88281349 | None:intergenic |
| TGTGATGGCTGCAAAACACG+TGG | 0.723313 | 1.4:+88281036 | MS.gene90781:CDS |
| GGGAGGATGAAATTGCTGAG+TGG | 0.740524 | 1.4:+88283060 | MS.gene90781:CDS |
| TGGTGAGCTTGATAACAGGG+AGG | 0.768194 | 1.4:+88281177 | MS.gene90781:CDS |
| GATTCACTACTTATGCAGAG+CGG | 0.818951 | 1.4:+88282333 | MS.gene90781:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAATAATTAATATAAAGCT+CGG | + | chr1.4:88284594-88284613 | MS.gene90781:intron | 15.0% |
| !! | CTTAAAAATAAATTATGCTT+GGG | - | chr1.4:88284359-88284378 | None:intergenic | 15.0% |
| !! | TCTTAAAAATAAATTATGCT+TGG | - | chr1.4:88284360-88284379 | None:intergenic | 15.0% |
| !!! | AAAAATATTGATTTTTCCTA+CGG | + | chr1.4:88283287-88283306 | MS.gene90781:intron | 15.0% |
| !!! | AATGTAAGCTTTATAAATAT+AGG | - | chr1.4:88282592-88282611 | None:intergenic | 15.0% |
| !!! | ATAATATATACTTTCTTTTC+TGG | + | chr1.4:88284443-88284462 | MS.gene90781:intron | 15.0% |
| !!! | GTTAATATAATTTTTCATTC+TGG | - | chr1.4:88283261-88283280 | None:intergenic | 15.0% |
| !! | ATAGTAAAATGAGTTAATGA+AGG | - | chr1.4:88283514-88283533 | None:intergenic | 20.0% |
| !! | ATCAAAGGTTAAATATTTGA+TGG | - | chr1.4:88284280-88284299 | None:intergenic | 20.0% |
| !! | GTAACTAATATGAAAACAAT+TGG | + | chr1.4:88281695-88281714 | MS.gene90781:intron | 20.0% |
| !! | TAATATAATGACCAACATAA+TGG | - | chr1.4:88284491-88284510 | None:intergenic | 20.0% |
| !! | TTAAAACACGAAAAATAATC+AGG | - | chr1.4:88282625-88282644 | None:intergenic | 20.0% |
| !!! | ACTTGTACTTTATTTATTAG+TGG | + | chr1.4:88282772-88282791 | MS.gene90781:intron | 20.0% |
| !!! | ATATAATTTTTCATTCTGGT+AGG | - | chr1.4:88283257-88283276 | None:intergenic | 20.0% |
| !!! | TCTTAAGTTGTTTATTTCAT+TGG | + | chr1.4:88282191-88282210 | MS.gene90781:intron | 20.0% |
| !!! | TTTTTATATTGCTTCATAGA+TGG | + | chr1.4:88283967-88283986 | MS.gene90781:intron | 20.0% |
| ! | AGATAAAGATTCCAAAACAA+AGG | - | chr1.4:88282174-88282193 | None:intergenic | 25.0% |
| ! | AGTAAAAGAAATGAAAGGAA+AGG | - | chr1.4:88283561-88283580 | None:intergenic | 25.0% |
| ! | AGTAAGTAGAATGAAATCAA+GGG | - | chr1.4:88283824-88283843 | None:intergenic | 25.0% |
| ! | AGTAAGTTAGACTATTGAAA+TGG | + | chr1.4:88283796-88283815 | MS.gene90781:intron | 25.0% |
| ! | ATAATTAATATAAAGCTCGG+TGG | + | chr1.4:88284597-88284616 | MS.gene90781:intron | 25.0% |
| ! | ATATAAGACAATTGTATCAC+TGG | + | chr1.4:88283007-88283026 | MS.gene90781:CDS | 25.0% |
| ! | ATATGGTCTGGAAAATATAT+AGG | + | chr1.4:88284001-88284020 | MS.gene90781:intron | 25.0% |
| ! | ATCAAAGTTGTGATTATCAA+AGG | - | chr1.4:88284295-88284314 | None:intergenic | 25.0% |
| ! | ATTGTTTGGAAATTATGAGT+GGG | + | chr1.4:88281303-88281322 | MS.gene90781:CDS | 25.0% |
| ! | ATTTATAGAACTGAAAGCTA+AGG | - | chr1.4:88284042-88284061 | None:intergenic | 25.0% |
| ! | CACAAATACTAAAGCAATTA+AGG | - | chr1.4:88281826-88281845 | None:intergenic | 25.0% |
| ! | TACAATTGTCTTATATACAC+TGG | - | chr1.4:88283003-88283022 | None:intergenic | 25.0% |
| ! | TATGTTGTATAATATTGTGC+AGG | + | chr1.4:88284639-88284658 | MS.gene90781:intron | 25.0% |
| ! | TTTAAAGGTTCATATTTCAG+AGG | - | chr1.4:88284328-88284347 | None:intergenic | 25.0% |
| !! | AAAGGTCAAATGTTTAACTT+TGG | - | chr1.4:88282284-88282303 | None:intergenic | 25.0% |
| !! | AAATATTTGATGGCTAACTT+AGG | - | chr1.4:88284270-88284289 | None:intergenic | 25.0% |
| !! | CAATGCATATTTTGTCATAT+TGG | + | chr1.4:88282743-88282762 | MS.gene90781:intron | 25.0% |
| !! | GCAAAGGTTACATTTTTAAT+TGG | - | chr1.4:88282101-88282120 | None:intergenic | 25.0% |
| !! | TTGTTTTCCTAAACTATTAC+GGG | - | chr1.4:88281672-88281691 | None:intergenic | 25.0% |
| !!! | GTTGTTTTCCTAAACTATTA+CGG | - | chr1.4:88281673-88281692 | None:intergenic | 25.0% |
| !!! | TATATACTTTCTTTTCTGGT+AGG | + | chr1.4:88284447-88284466 | MS.gene90781:intron | 25.0% |
| !!! | TGTTTTTTGTTGAAAGTTTG+AGG | - | chr1.4:88280896-88280915 | None:intergenic | 25.0% |
| AAAAGAGCCATGTTGAATAT+TGG | + | chr1.4:88282383-88282402 | MS.gene90781:CDS | 30.0% | |
| AAACGTTAAAAGAAGTTGGA+AGG | + | chr1.4:88284779-88284798 | MS.gene90781:CDS | 30.0% | |
| AACAGAAAGAGAATAAAGAG+GGG | - | chr1.4:88283585-88283604 | None:intergenic | 30.0% | |
| AACATGCAAACTGTAAAAAC+CGG | - | chr1.4:88282018-88282037 | None:intergenic | 30.0% | |
| AAGAATGCAAAAACTAGCAA+AGG | - | chr1.4:88282117-88282136 | None:intergenic | 30.0% | |
| AAGCTAAAAAATAACCAGGA+AGG | + | chr1.4:88282467-88282486 | MS.gene90781:CDS | 30.0% | |
| AATCAACAATGACGACTTAA+AGG | - | chr1.4:88282302-88282321 | None:intergenic | 30.0% | |
| AATTTATCAAATAGCAGCCA+TGG | + | chr1.4:88283606-88283625 | MS.gene90781:intron | 30.0% | |
| ACCAATTCCAATATTCAACA+TGG | - | chr1.4:88282393-88282412 | None:intergenic | 30.0% | |
| ACGTTTAATGGCAGAAATAA+TGG | + | chr1.4:88283693-88283712 | MS.gene90781:intron | 30.0% | |
| AGAAAAATCACTACAGAAAC+AGG | + | chr1.4:88281967-88281986 | MS.gene90781:intron | 30.0% | |
| ATCCAAAGATTATGAGGTTA+AGG | + | chr1.4:88284696-88284715 | MS.gene90781:CDS | 30.0% | |
| ATCTGAATCCAAAGATTATG+AGG | + | chr1.4:88284690-88284709 | MS.gene90781:CDS | 30.0% | |
| ATTCCAAAACAAAGGTTTCT+TGG | - | chr1.4:88282166-88282185 | None:intergenic | 30.0% | |
| CAGTAAGTAGAATGAAATCA+AGG | - | chr1.4:88283825-88283844 | None:intergenic | 30.0% | |
| CTAGTCTGATAATTTACTTG+TGG | + | chr1.4:88281907-88281926 | MS.gene90781:intron | 30.0% | |
| CTAGTGTCATACATTTCTAT+TGG | + | chr1.4:88284065-88284084 | MS.gene90781:intron | 30.0% | |
| GAACAGAAAGAGAATAAAGA+GGG | - | chr1.4:88283586-88283605 | None:intergenic | 30.0% | |
| GAATGTTCCAAAAGAATTGA+CGG | + | chr1.4:88281012-88281031 | MS.gene90781:CDS | 30.0% | |
| GACATTGAGTATAGACAAAA+GGG | - | chr1.4:88280919-88280938 | None:intergenic | 30.0% | |
| GACTAAGCTAAAAAATAACC+AGG | + | chr1.4:88282463-88282482 | MS.gene90781:CDS | 30.0% | |
| GAGAAAACGTTAAAAGAAGT+TGG | + | chr1.4:88284775-88284794 | MS.gene90781:CDS | 30.0% | |
| GATTGTTTGGAAATTATGAG+TGG | + | chr1.4:88281302-88281321 | MS.gene90781:CDS | 30.0% | |
| TCTTAAGTTCTCAACAACTA+TGG | - | chr1.4:88283188-88283207 | None:intergenic | 30.0% | |
| TGAACAGAAAGAGAATAAAG+AGG | - | chr1.4:88283587-88283606 | None:intergenic | 30.0% | |
| TGACATTGAGTATAGACAAA+AGG | - | chr1.4:88280920-88280939 | None:intergenic | 30.0% | |
| TGAGAAGCTTCAATAGATTT+CGG | - | chr1.4:88283122-88283141 | None:intergenic | 30.0% | |
| TGTTGAATATTGGAATTGGT+TGG | + | chr1.4:88282393-88282412 | MS.gene90781:CDS | 30.0% | |
| ! | ACAAGACCAATGAACATTTT+TGG | + | chr1.4:88281488-88281507 | MS.gene90781:CDS | 30.0% |
| ! | ACTCATTTTACTATTACTGC+TGG | + | chr1.4:88283520-88283539 | MS.gene90781:intron | 30.0% |
| ! | AGCAATTAAGGCTATGTTTT+TGG | - | chr1.4:88281814-88281833 | None:intergenic | 30.0% |
| ! | ATCAATCAAGTTGCCAAATA+AGG | - | chr1.4:88283389-88283408 | None:intergenic | 30.0% |
| ! | GCAATTAAGGCTATGTTTTT+GGG | - | chr1.4:88281813-88281832 | None:intergenic | 30.0% |
| ! | GTCAAATGTTTAACTTTGGT+AGG | - | chr1.4:88282280-88282299 | None:intergenic | 30.0% |
| ! | GTTTATTTCATTGGTTGACA+TGG | + | chr1.4:88282200-88282219 | MS.gene90781:intron | 30.0% |
| ! | TCAATCAAGTTGCCAAATAA+GGG | - | chr1.4:88283388-88283407 | None:intergenic | 30.0% |
| ! | TGTTTTCCTAAACTATTACG+GGG | - | chr1.4:88281671-88281690 | None:intergenic | 30.0% |
| ! | TTATTATATATGTGCTGCTC+CGG | + | chr1.4:88281996-88282015 | MS.gene90781:intron | 30.0% |
| ! | TTCTACTTACTGACTAGAAT+AGG | + | chr1.4:88283833-88283852 | MS.gene90781:intron | 30.0% |
| ! | TTTTGCATTCTTCCTTTGAT+TGG | + | chr1.4:88282125-88282144 | MS.gene90781:intron | 30.0% |
| ! | TTTTTGTTGAAAGTTTGAGG+AGG | - | chr1.4:88280893-88280912 | None:intergenic | 30.0% |
| !! | AAACCAAGAAACCTTTGTTT+TGG | + | chr1.4:88282160-88282179 | MS.gene90781:intron | 30.0% |
| !! | ATCAATCGATTTGAACTTGA+AGG | - | chr1.4:88282865-88282884 | None:intergenic | 30.0% |
| !! | ATGAGCTGCTCATTTTTATA+TGG | + | chr1.4:88283418-88283437 | MS.gene90781:intron | 30.0% |
| !! | ATGATGATGATGAGTGTTTT+GGG | + | chr1.4:88281077-88281096 | MS.gene90781:CDS | 30.0% |
| !! | CATTGTTGATTGTGGTTTTA+GGG | + | chr1.4:88282311-88282330 | MS.gene90781:intron | 30.0% |
| !! | TCATTGTTGATTGTGGTTTT+AGG | + | chr1.4:88282310-88282329 | MS.gene90781:intron | 30.0% |
| !!! | AAATAGCTGATTTTTTGCCA+TGG | + | chr1.4:88283720-88283739 | MS.gene90781:intron | 30.0% |
| !!! | ATTCTTTTGGAACATTCAAC+CGG | - | chr1.4:88281009-88281028 | None:intergenic | 30.0% |
| !!! | TCATTTGCTGTTTTTGTTCT+GGG | + | chr1.4:88282712-88282731 | MS.gene90781:intron | 30.0% |
| !!! | TCTTATCGATTTTGGATAGT+GGG | - | chr1.4:88283746-88283765 | None:intergenic | 30.0% |
| !!! | TTCATTTGCTGTTTTTGTTC+TGG | + | chr1.4:88282711-88282730 | MS.gene90781:intron | 30.0% |
| AACTGATCACTACATGTTTG+TGG | + | chr1.4:88283480-88283499 | MS.gene90781:intron | 35.0% | |
| AACTGGAAACCTTTCTCATA+TGG | - | chr1.4:88282524-88282543 | None:intergenic | 35.0% | |
| AAGCATGAATGGTTGAAGAT+GGG | - | chr1.4:88280637-88280656 | None:intergenic | 35.0% | |
| AATATTGGAATTGGTTGGAG+GGG | + | chr1.4:88282398-88282417 | MS.gene90781:CDS | 35.0% | |
| ACATTGTATGTGCCCTTATT+TGG | + | chr1.4:88283373-88283392 | MS.gene90781:intron | 35.0% | |
| ACTGCAAATGCAAATAGGTA+AGG | - | chr1.4:88281157-88281176 | None:intergenic | 35.0% | |
| AGAATAAGAATGAGCAGCAT+GGG | - | chr1.4:88284419-88284438 | None:intergenic | 35.0% | |
| AGATGGAGAGATGTGATATA+TGG | + | chr1.4:88283984-88284003 | MS.gene90781:intron | 35.0% | |
| AGTATTTGTGTGTCTGCAAA+TGG | + | chr1.4:88281836-88281855 | MS.gene90781:intron | 35.0% | |
| ATAAGATTGACCTTGTACTG+TGG | + | chr1.4:88282934-88282953 | MS.gene90781:CDS | 35.0% | |
| ATACCACCATAAGGAAAACT+AGG | - | chr1.4:88281355-88281374 | None:intergenic | 35.0% | |
| CAATCTTATTCTCTATGCCA+GGG | - | chr1.4:88282923-88282942 | None:intergenic | 35.0% | |
| CACCTTAACCTCATAATCTT+TGG | - | chr1.4:88284701-88284720 | None:intergenic | 35.0% | |
| CACTGTCATCCTTTACAAAT+TGG | - | chr1.4:88283668-88283687 | None:intergenic | 35.0% | |
| CAGTTCATATGCCATTATGT+TGG | + | chr1.4:88284477-88284496 | MS.gene90781:intron | 35.0% | |
| CATAAGCAAACCAGAATATG+AGG | - | chr1.4:88281870-88281889 | None:intergenic | 35.0% | |
| CTACATATGCTTGCCAAAAA+TGG | - | chr1.4:88284938-88284957 | None:intergenic | 35.0% | |
| GAAATCTAAGTAGAGTGTGA+GGG | - | chr1.4:88280615-88280634 | None:intergenic | 35.0% | |
| GAAATCTATTGAAGCTTCTC+AGG | + | chr1.4:88283121-88283140 | MS.gene90781:CDS | 35.0% | |
| GAATATTGGAATTGGTTGGA+GGG | + | chr1.4:88282397-88282416 | MS.gene90781:CDS | 35.0% | |
| GCCATGTTGAATATTGGAAT+TGG | + | chr1.4:88282389-88282408 | MS.gene90781:CDS | 35.0% | |
| GGAGCAGCACATATATAATA+AGG | - | chr1.4:88281997-88282016 | None:intergenic | 35.0% | |
| GGATTTGATATGTTAGTCAC+TGG | + | chr1.4:88284086-88284105 | MS.gene90781:intron | 35.0% | |
| GGGGAAGTAAAAGAAATGAA+AGG | - | chr1.4:88283566-88283585 | None:intergenic | 35.0% | |
| GTATACCTTTCGTACATGTT+TGG | + | chr1.4:88281538-88281557 | MS.gene90781:intron | 35.0% | |
| GTATTTGTGTGTCTGCAAAT+GGG | + | chr1.4:88281837-88281856 | MS.gene90781:intron | 35.0% | |
| GTTGAGCCAAAAATGTTCAT+TGG | - | chr1.4:88281497-88281516 | None:intergenic | 35.0% | |
| GTTTAAATGAGGATGTAGAG+AGG | + | chr1.4:88282420-88282439 | MS.gene90781:CDS | 35.0% | |
| TAAGTTCTCAACAACTATGG+CGG | - | chr1.4:88283185-88283204 | None:intergenic | 35.0% | |
| TACAAATTGGCCATAGCAAT+AGG | - | chr1.4:88283655-88283674 | None:intergenic | 35.0% | |
| TACCTATTTGCATTTGCAGT+TGG | + | chr1.4:88281157-88281176 | MS.gene90781:CDS | 35.0% | |
| TAGAATAAGAATGAGCAGCA+TGG | - | chr1.4:88284420-88284439 | None:intergenic | 35.0% | |
| TCAATCCAAACATGTACGAA+AGG | - | chr1.4:88281546-88281565 | None:intergenic | 35.0% | |
| TCAATCTTATTCTCTATGCC+AGG | - | chr1.4:88282924-88282943 | None:intergenic | 35.0% | |
| TCCAAAAGAAAGCCAATCAA+AGG | - | chr1.4:88282140-88282159 | None:intergenic | 35.0% | |
| TCCACTTTAAGCTCTTCAAA+AGG | + | chr1.4:88284557-88284576 | MS.gene90781:intron | 35.0% | |
| TCTTGCGAAATGTACAGATT+GGG | + | chr1.4:88282799-88282818 | MS.gene90781:intron | 35.0% | |
| TGAATATTGGAATTGGTTGG+AGG | + | chr1.4:88282396-88282415 | MS.gene90781:CDS | 35.0% | |
| TGGTTGACATGGAGAAAAAT+TGG | + | chr1.4:88282211-88282230 | MS.gene90781:intron | 35.0% | |
| TGTCTTATATACACTGGAGT+CGG | - | chr1.4:88282997-88283016 | None:intergenic | 35.0% | |
| TTAAGATCAACATCCTACCT+AGG | + | chr1.4:88283202-88283221 | MS.gene90781:intron | 35.0% | |
| TTACTATTACTGCTGGTCAT+GGG | + | chr1.4:88283527-88283546 | MS.gene90781:intron | 35.0% | |
| TTCAGAAACTCATCAAATGC+AGG | - | chr1.4:88282828-88282847 | None:intergenic | 35.0% | |
| TTCTCGTTATGTGTATAACG+AGG | - | chr1.4:88281951-88281970 | None:intergenic | 35.0% | |
| TTCTTGCGAAATGTACAGAT+TGG | + | chr1.4:88282798-88282817 | MS.gene90781:intron | 35.0% | |
| TTGCTATGGCCAATTTGTAA+AGG | + | chr1.4:88283656-88283675 | MS.gene90781:intron | 35.0% | |
| TTTACTATTACTGCTGGTCA+TGG | + | chr1.4:88283526-88283545 | MS.gene90781:intron | 35.0% | |
| ! | ATATAAAGGAGGTTTGGTAG+TGG | - | chr1.4:88284394-88284413 | None:intergenic | 35.0% |
| ! | TAAGTCGTCATTGTTGATTG+TGG | + | chr1.4:88282303-88282322 | MS.gene90781:intron | 35.0% |
| ! | TAGTTTTCCTTATGGTGGTA+TGG | + | chr1.4:88281354-88281373 | MS.gene90781:CDS | 35.0% |
| ! | TATTGTCGCTTCATCATTGT+AGG | + | chr1.4:88282044-88282063 | MS.gene90781:intron | 35.0% |
| ! | TCTTGAGAATTGGTTGTTTC+TGG | + | chr1.4:88283880-88283899 | MS.gene90781:intron | 35.0% |
| ! | TGAGTTTAGAACCCTTGATT+GGG | - | chr1.4:88280790-88280809 | None:intergenic | 35.0% |
| ! | TTAATATAAAGCTCGGTGGA+AGG | + | chr1.4:88284601-88284620 | MS.gene90781:intron | 35.0% |
| !! | AATCGATTTGAACTTGAAGG+TGG | - | chr1.4:88282862-88282881 | None:intergenic | 35.0% |
| !! | ACAATATTGAAGAGTGCTTC+AGG | + | chr1.4:88284120-88284139 | MS.gene90781:intron | 35.0% |
| !! | AGCCATTAGGGTTTGTTATT+CGG | + | chr1.4:88280982-88281001 | MS.gene90781:CDS | 35.0% |
| !! | GATGATGATGATGAGTGTTT+TGG | + | chr1.4:88281076-88281095 | MS.gene90781:CDS | 35.0% |
| !! | TCCTTTTGAAGAGCTTAAAG+TGG | - | chr1.4:88284561-88284580 | None:intergenic | 35.0% |
| !! | TGTTTGCTTTAAGGAAGTCA+AGG | - | chr1.4:88282899-88282918 | None:intergenic | 35.0% |
| !! | TTAAGGTGTCATTTCTCCAA+CGG | + | chr1.4:88284713-88284732 | MS.gene90781:CDS | 35.0% |
| !!! | GCTTGGGTGTATTGTTTTAA+AGG | - | chr1.4:88284343-88284362 | None:intergenic | 35.0% |
| !!! | GGATTTTTTGCCTATTGCTA+TGG | + | chr1.4:88283642-88283661 | MS.gene90781:intron | 35.0% |
| !!! | GTCTTATCGATTTTGGATAG+TGG | - | chr1.4:88283747-88283766 | None:intergenic | 35.0% |
| !!! | TCCTTTGATTGGCTTTCTTT+TGG | + | chr1.4:88282136-88282155 | MS.gene90781:intron | 35.0% |
| !!! | TTCTTTTGGAACATTCAACC+GGG | - | chr1.4:88281008-88281027 | None:intergenic | 35.0% |
| AAAAGAATTGACGGCTGTGA+TGG | + | chr1.4:88281021-88281040 | MS.gene90781:CDS | 40.0% | |
| ACAACTCCCCGTAATAGTTT+AGG | + | chr1.4:88281662-88281681 | MS.gene90781:intron | 40.0% | |
| ACACCAGAAAGAATCCTAGA+CGG | - | chr1.4:88283775-88283794 | None:intergenic | 40.0% | |
| ACCTGAGAATACACATCATC+AGG | - | chr1.4:88282500-88282519 | None:intergenic | 40.0% | |
| ACTGAGGATATGATTAGGGA+AGG | + | chr1.4:88281274-88281293 | MS.gene90781:CDS | 40.0% | |
| AGAGAGGTTCAAGGACAATA+TGG | + | chr1.4:88282436-88282455 | MS.gene90781:CDS | 40.0% | |
| AGCCTCAGAAAAAAGTCTCT+TGG | - | chr1.4:88284875-88284894 | None:intergenic | 40.0% | |
| ATCAACATCCTACCTAGGAT+CGG | + | chr1.4:88283207-88283226 | MS.gene90781:intron | 40.0% | |
| ATGGGACTGAGGATATGATT+AGG | + | chr1.4:88281269-88281288 | MS.gene90781:CDS | 40.0% | |
| ATGTGTCTGCTCTTGAGAAT+TGG | + | chr1.4:88283870-88283889 | MS.gene90781:intron | 40.0% | |
| ATTGAAGAGCAGAGGAAGAA+GGG | - | chr1.4:88280862-88280881 | None:intergenic | 40.0% | |
| CAAAATTGCTGCACTCTTAG+AGG | + | chr1.4:88283457-88283476 | MS.gene90781:intron | 40.0% | |
| CAAAGCTTACTATAGCGAAG+TGG | + | chr1.4:88284753-88284772 | MS.gene90781:CDS | 40.0% | |
| CACCAACTGCAAATGCAAAT+AGG | - | chr1.4:88281162-88281181 | None:intergenic | 40.0% | |
| CAGCTGCTAAAGAGTTTGAT+GGG | + | chr1.4:88281251-88281270 | MS.gene90781:CDS | 40.0% | |
| CCTGAGAATACACATCATCA+GGG | - | chr1.4:88282499-88282518 | None:intergenic | 40.0% | |
| CTCGTTAAAACAGTGCAGAA+AGG | + | chr1.4:88284171-88284190 | MS.gene90781:intron | 40.0% | |
| CTGAGGATATGATTAGGGAA+GGG | + | chr1.4:88281275-88281294 | MS.gene90781:CDS | 40.0% | |
| GAAGCATGAATGGTTGAAGA+TGG | - | chr1.4:88280638-88280657 | None:intergenic | 40.0% | |
| GAATAACAAACCCTAATGGC+TGG | - | chr1.4:88280983-88281002 | None:intergenic | 40.0% | |
| GACAGTGTCATGACGTTTAA+TGG | + | chr1.4:88283681-88283700 | MS.gene90781:intron | 40.0% | |
| GAGAGATGTGATATATGGTC+TGG | + | chr1.4:88283989-88284008 | MS.gene90781:intron | 40.0% | |
| GATTCACTACTTATGCAGAG+CGG | + | chr1.4:88282333-88282352 | MS.gene90781:CDS | 40.0% | |
| GCAAATAGGTAAGGTGGAAT+TGG | - | chr1.4:88281148-88281167 | None:intergenic | 40.0% | |
| GCAAATGCAAATAGGTAAGG+TGG | - | chr1.4:88281154-88281173 | None:intergenic | 40.0% | |
| GCCACTAAACACGAATTTCT+AGG | - | chr1.4:88284152-88284171 | None:intergenic | 40.0% | |
| GCCTAGAAATTCGTGTTTAG+TGG | + | chr1.4:88284148-88284167 | MS.gene90781:intron | 40.0% | |
| GGAAATCTAAGTAGAGTGTG+AGG | - | chr1.4:88280616-88280635 | None:intergenic | 40.0% | |
| GTCTTATATACACTGGAGTC+GGG | - | chr1.4:88282996-88283015 | None:intergenic | 40.0% | |
| GTTATTAAAGGGGATGCAAC+CGG | + | chr1.4:88281409-88281428 | MS.gene90781:CDS | 40.0% | |
| TAAACTATTACGGGGAGTTG+TGG | - | chr1.4:88281663-88281682 | None:intergenic | 40.0% | |
| TAAAGAGTTTGATGGGACTG+AGG | + | chr1.4:88281258-88281277 | MS.gene90781:CDS | 40.0% | |
| TCAACAACACCTTGAGCAAT+AGG | - | chr1.4:88284913-88284932 | None:intergenic | 40.0% | |
| TCAGCTGCTAAAGAGTTTGA+TGG | + | chr1.4:88281250-88281269 | MS.gene90781:CDS | 40.0% | |
| TCTCAGGTTCCATATGAGAA+AGG | + | chr1.4:88282512-88282531 | MS.gene90781:CDS | 40.0% | |
| TGAGGATATGATTAGGGAAG+GGG | + | chr1.4:88281276-88281295 | MS.gene90781:CDS | 40.0% | |
| TGGCAAATGAGTCGGTAAAT+GGG | + | chr1.4:88283027-88283046 | MS.gene90781:CDS | 40.0% | |
| TGGGACTGAGGATATGATTA+GGG | + | chr1.4:88281270-88281289 | MS.gene90781:CDS | 40.0% | |
| TGGGCTATATAAAGGAGGTT+TGG | - | chr1.4:88284400-88284419 | None:intergenic | 40.0% | |
| TGTATCACTGGCAAATGAGT+CGG | + | chr1.4:88283019-88283038 | MS.gene90781:CDS | 40.0% | |
| TGTGTATGAGTGAGGATCAA+CGG | - | chr1.4:88280561-88280580 | None:intergenic | 40.0% | |
| TGTTACCATCCTATTGCTCA+AGG | + | chr1.4:88284901-88284920 | MS.gene90781:CDS | 40.0% | |
| TGTTGTACCTCATAACGAGT+TGG | - | chr1.4:88283314-88283333 | None:intergenic | 40.0% | |
| TTCCTTAAAGCAAACATCCC+TGG | + | chr1.4:88282903-88282922 | MS.gene90781:CDS | 40.0% | |
| ! | AGTGATGGAGTGGATTTCAA+GGG | - | chr1.4:88280717-88280736 | None:intergenic | 40.0% |
| ! | ATCACAGCCGTCAATTCTTT+TGG | - | chr1.4:88281022-88281041 | None:intergenic | 40.0% |
| ! | GTGAGTTTAGAACCCTTGAT+TGG | - | chr1.4:88280791-88280810 | None:intergenic | 40.0% |
| ! | TAGTTTGTAGCGTGAATCCA+AGG | - | chr1.4:88284671-88284690 | None:intergenic | 40.0% |
| !! | AGTTGGTGAGCTTGATAACA+GGG | + | chr1.4:88281174-88281193 | MS.gene90781:CDS | 40.0% |
| !! | GTGGGAGAGATTTGATTTGT+TGG | + | chr1.4:88281321-88281340 | MS.gene90781:CDS | 40.0% |
| !! | TAAGGTGTCATTTCTCCAAC+GGG | + | chr1.4:88284714-88284733 | MS.gene90781:CDS | 40.0% |
| !! | TATTGCTCAAGGTGTTGTTG+AGG | + | chr1.4:88284912-88284931 | MS.gene90781:CDS | 40.0% |
| !! | TTGCCACCTAGTTTTCCTTA+TGG | + | chr1.4:88281346-88281365 | MS.gene90781:CDS | 40.0% |
| !!! | GGGAACAGTCTTATCGATTT+TGG | - | chr1.4:88283754-88283773 | None:intergenic | 40.0% |
| !!! | TGAACATTTTTGGCTCAACG+AGG | + | chr1.4:88281498-88281517 | MS.gene90781:CDS | 40.0% |
| !!! | TGCCAAGAGACTTTTTTCTG+AGG | + | chr1.4:88284870-88284889 | MS.gene90781:CDS | 40.0% |
| !!! | TGTTTTGGGAATTCGTCCAA+AGG | + | chr1.4:88281091-88281110 | MS.gene90781:CDS | 40.0% |
| AAGTGATGAGAAAGGAGGTG+TGG | - | chr1.4:88280829-88280848 | None:intergenic | 45.0% | |
| AGGGAAGGGGAAAGATTGTT+TGG | + | chr1.4:88281289-88281308 | MS.gene90781:CDS | 45.0% | |
| AGGTGTGGTTAGAAAGAGTG+AGG | - | chr1.4:88280814-88280833 | None:intergenic | 45.0% | |
| ATCCAAACCACAATCTGCCA+TGG | - | chr1.4:88283626-88283645 | None:intergenic | 45.0% | |
| ATCCCCTTTAATAACCGTCG+GGG | - | chr1.4:88281404-88281423 | None:intergenic | 45.0% | |
| ATGGTGGTATGGAGAATCCA+AGG | + | chr1.4:88281365-88281384 | MS.gene90781:CDS | 45.0% | |
| ATGGTTGGAGAGAGGGAAAA+AGG | - | chr1.4:88280764-88280783 | None:intergenic | 45.0% | |
| CAAATGAGTCGGTAAATGGG+AGG | + | chr1.4:88283030-88283049 | MS.gene90781:CDS | 45.0% | |
| CAACACCTTGAGCAATAGGA+TGG | - | chr1.4:88284909-88284928 | None:intergenic | 45.0% | |
| CACCAGAAAGAATCCTAGAC+GGG | - | chr1.4:88283774-88283793 | None:intergenic | 45.0% | |
| CATCCCCTTTAATAACCGTC+GGG | - | chr1.4:88281405-88281424 | None:intergenic | 45.0% | |
| CATTGAAGAGCAGAGGAAGA+AGG | - | chr1.4:88280863-88280882 | None:intergenic | 45.0% | |
| CCACCATAAGGAAAACTAGG+TGG | - | chr1.4:88281352-88281371 | None:intergenic | 45.0% | |
| CCTGACAAGGGAAAACAGAA+CGG | - | chr1.4:88280955-88280974 | None:intergenic | 45.0% | |
| CTGACAAGGGAAAACAGAAC+GGG | - | chr1.4:88280954-88280973 | None:intergenic | 45.0% | |
| CTGGCAAATGAGTCGGTAAA+TGG | + | chr1.4:88283026-88283045 | MS.gene90781:CDS | 45.0% | |
| CTTCTTCCTCTGCTCTTCAA+TGG | + | chr1.4:88280861-88280880 | MS.gene90781:CDS | 45.0% | |
| GAAAACAGAACGGGCATGAA+TGG | - | chr1.4:88280945-88280964 | None:intergenic | 45.0% | |
| GAATTCGTCCAAAGGTAGAG+TGG | + | chr1.4:88281099-88281118 | MS.gene90781:CDS | 45.0% | |
| GATGAAATTGCTGAGTGGCA+AGG | + | chr1.4:88283065-88283084 | MS.gene90781:CDS | 45.0% | |
| GCATCCCCTTTAATAACCGT+CGG | - | chr1.4:88281406-88281425 | None:intergenic | 45.0% | |
| GGATTCTCCATACCACCATA+AGG | - | chr1.4:88281364-88281383 | None:intergenic | 45.0% | |
| GGCCGAATAACAAACCCTAA+TGG | - | chr1.4:88280987-88281006 | None:intergenic | 45.0% | |
| GGGAAAGTCTCCTCATATTC+TGG | + | chr1.4:88281857-88281876 | MS.gene90781:intron | 45.0% | |
| GGTGGTGTAAGTGATGAGAA+AGG | - | chr1.4:88280837-88280856 | None:intergenic | 45.0% | |
| GGTGTAAGTGATGAGAAAGG+AGG | - | chr1.4:88280834-88280853 | None:intergenic | 45.0% | |
| GGTGTGGTTAGAAAGAGTGA+GGG | - | chr1.4:88280813-88280832 | None:intergenic | 45.0% | |
| GTGTATGAGTGAGGATCAAC+GGG | - | chr1.4:88280560-88280579 | None:intergenic | 45.0% | |
| GTTCAATGCGCAACAAGAAC+TGG | - | chr1.4:88282541-88282560 | None:intergenic | 45.0% | |
| GTTGAGTCTGTGTATGAGTG+AGG | - | chr1.4:88280569-88280588 | None:intergenic | 45.0% | |
| TAAGAGCCATTGAAGAGCAG+AGG | - | chr1.4:88280870-88280889 | None:intergenic | 45.0% | |
| TACCTTCTGTCCACAGTACA+AGG | - | chr1.4:88282947-88282966 | None:intergenic | 45.0% | |
| TATTGTGCAGGTCTTAGCCT+TGG | + | chr1.4:88284651-88284670 | MS.gene90781:intron | 45.0% | |
| TCAACATCCTACCTAGGATC+GGG | + | chr1.4:88283208-88283227 | MS.gene90781:intron | 45.0% | |
| TCAGCAATTTCATCCTCCCT+TGG | - | chr1.4:88283059-88283078 | None:intergenic | 45.0% | |
| TCAGCATAAACCCTAGTCCT+GGG | - | chr1.4:88281208-88281227 | None:intergenic | 45.0% | |
| TGAAGCTGCGACTCAATTGT+TGG | + | chr1.4:88281225-88281244 | MS.gene90781:CDS | 45.0% | |
| TGACCCCGACGGTTATTAAA+GGG | + | chr1.4:88281398-88281417 | MS.gene90781:CDS | 45.0% | |
| TGAGGATGTAGAGAGGTTCA+AGG | + | chr1.4:88282427-88282446 | MS.gene90781:CDS | 45.0% | |
| TGCCAGGGATGTTTGCTTTA+AGG | - | chr1.4:88282908-88282927 | None:intergenic | 45.0% | |
| TGGTATGGAGAATCCAAGGA+TGG | + | chr1.4:88281369-88281388 | MS.gene90781:CDS | 45.0% | |
| TGGTTGGAGAGAGGGAAAAA+GGG | - | chr1.4:88280763-88280782 | None:intergenic | 45.0% | |
| TGGTTGGAGGGGTTTAAATG+AGG | + | chr1.4:88282409-88282428 | MS.gene90781:CDS | 45.0% | |
| TTCACCAGTGCAGTGTAAAG+TGG | - | chr1.4:88284820-88284839 | None:intergenic | 45.0% | |
| TTCAGCATAAACCCTAGTCC+TGG | - | chr1.4:88281209-88281228 | None:intergenic | 45.0% | |
| TTGAAGAGCAGAGGAAGAAG+GGG | - | chr1.4:88280861-88280880 | None:intergenic | 45.0% | |
| TTGACCCCGACGGTTATTAA+AGG | + | chr1.4:88281397-88281416 | MS.gene90781:CDS | 45.0% | |
| ! | AGTGGTGGAAGAGTTTGAGA+TGG | + | chr1.4:88281117-88281136 | MS.gene90781:CDS | 45.0% |
| ! | CAACTATGGCGGAAACAGAA+AGG | - | chr1.4:88283174-88283193 | None:intergenic | 45.0% |
| ! | CAGCATGGGCTATATAAAGG+AGG | - | chr1.4:88284405-88284424 | None:intergenic | 45.0% |
| ! | CAGTGATGGAGTGGATTTCA+AGG | - | chr1.4:88280718-88280737 | None:intergenic | 45.0% |
| ! | CCCTGATGATGTGTATTCTC+AGG | + | chr1.4:88282496-88282515 | MS.gene90781:CDS | 45.0% |
| ! | CTCATGAACTTGCTCATAGC+TGG | + | chr1.4:88281446-88281465 | MS.gene90781:CDS | 45.0% |
| ! | GAAGAGTGCAGAAGCATGAA+TGG | - | chr1.4:88280648-88280667 | None:intergenic | 45.0% |
| ! | GAGCAGCATGGGCTATATAA+AGG | - | chr1.4:88284408-88284427 | None:intergenic | 45.0% |
| ! | TATAAAGCTCGGTGGAAGGT+TGG | + | chr1.4:88284605-88284624 | MS.gene90781:intron | 45.0% |
| ! | TTCCCGTCTAGGATTCTTTC+TGG | + | chr1.4:88283769-88283788 | MS.gene90781:intron | 45.0% |
| !! | CAGTTGGTGAGCTTGATAAC+AGG | + | chr1.4:88281173-88281192 | MS.gene90781:CDS | 45.0% |
| !! | CCACCTAGTTTTCCTTATGG+TGG | + | chr1.4:88281349-88281368 | MS.gene90781:CDS | 45.0% |
| !! | GGATTGGAGTGGATTGAGAA+GGG | - | chr1.4:88280742-88280761 | None:intergenic | 45.0% |
| !! | TTAGGGTTTGTTATTCGGCC+CGG | + | chr1.4:88280987-88281006 | MS.gene90781:CDS | 45.0% |
| !!! | GGTGTTGTTGAGGCCATTTT+TGG | + | chr1.4:88284922-88284941 | MS.gene90781:CDS | 45.0% |
| AATTGCTGAGTGGCAAGGTC+AGG | + | chr1.4:88283070-88283089 | MS.gene90781:CDS | 50.0% | |
| ACTCTCCAAAACCCTCACTC+TGG | + | chr1.4:88280668-88280687 | MS.gene90781:CDS | 50.0% | |
| AGAACCCTTGATTGGGTCGA+TGG | - | chr1.4:88280783-88280802 | None:intergenic | 50.0% | |
| AGCCATGGCAGATTGTGGTT+TGG | + | chr1.4:88283621-88283640 | MS.gene90781:intron | 50.0% | |
| AGGAAGAAAGGACCAGAGTG+AGG | - | chr1.4:88280683-88280702 | None:intergenic | 50.0% | |
| AGGATTGTGGAGGCTGTACA+AGG | + | chr1.4:88282356-88282375 | MS.gene90781:CDS | 50.0% | |
| AGGGAAATGTGAGTGGTTGG+TGG | - | chr1.4:88280596-88280615 | None:intergenic | 50.0% | |
| ATAGCAGCCATGGCAGATTG+TGG | + | chr1.4:88283616-88283635 | MS.gene90781:intron | 50.0% | |
| ATCCGCATGAAATAGCCCGT+TGG | - | chr1.4:88284732-88284751 | None:intergenic | 50.0% | |
| CAACATCCTACCTAGGATCG+GGG | + | chr1.4:88283209-88283228 | MS.gene90781:intron | 50.0% | |
| CATCAGGGTCAATTCCTTCC+TGG | - | chr1.4:88282484-88282503 | None:intergenic | 50.0% | |
| CCAACCATCGACCCAATCAA+GGG | + | chr1.4:88280776-88280795 | MS.gene90781:CDS | 50.0% | |
| CCAGTGCAGTGTAAAGTGGA+CGG | - | chr1.4:88284816-88284835 | None:intergenic | 50.0% | |
| CGATAAGACTGTTCCCGTCT+AGG | + | chr1.4:88283758-88283777 | MS.gene90781:intron | 50.0% | |
| CTACGGTCCAACTCGTTATG+AGG | + | chr1.4:88283304-88283323 | MS.gene90781:intron | 50.0% | |
| CTCTTCCACCACTCTACCTT+TGG | - | chr1.4:88281110-88281129 | None:intergenic | 50.0% | |
| CTTGTTGCGCATTGAACGTG+AGG | + | chr1.4:88282544-88282563 | MS.gene90781:CDS | 50.0% | |
| GACCCCGACGGTTATTAAAG+GGG | + | chr1.4:88281399-88281418 | MS.gene90781:CDS | 50.0% | |
| GACCTTGTACTGTGGACAGA+AGG | + | chr1.4:88282942-88282961 | MS.gene90781:CDS | 50.0% | |
| GAGGGAAAAAGGGATTGGAG+TGG | - | chr1.4:88280753-88280772 | None:intergenic | 50.0% | |
| GAGTGTGAGGGAAATGTGAG+TGG | - | chr1.4:88280603-88280622 | None:intergenic | 50.0% | |
| GGAAGAAAGGACCAGAGTGA+GGG | - | chr1.4:88280682-88280701 | None:intergenic | 50.0% | |
| GGAGAGAGGGAAAAAGGGAT+TGG | - | chr1.4:88280758-88280777 | None:intergenic | 50.0% | |
| GGATTGAGAAGGGTCAGTGA+TGG | - | chr1.4:88280732-88280751 | None:intergenic | 50.0% | |
| GGGAAATGTGAGTGGTTGGT+GGG | - | chr1.4:88280595-88280614 | None:intergenic | 50.0% | |
| GGGAGGATGAAATTGCTGAG+TGG | + | chr1.4:88283060-88283079 | MS.gene90781:CDS | 50.0% | |
| GGGGTCAAAAACACCATCCT+TGG | - | chr1.4:88281385-88281404 | None:intergenic | 50.0% | |
| GGTAAATGGGAGGATGCCAA+GGG | + | chr1.4:88283040-88283059 | MS.gene90781:CDS | 50.0% | |
| GTGAGGGAAATGTGAGTGGT+TGG | - | chr1.4:88280599-88280618 | None:intergenic | 50.0% | |
| TCACTACTTATGCAGAGCGG+AGG | + | chr1.4:88282336-88282355 | MS.gene90781:CDS | 50.0% | |
| TCAGGACACACCAGCCATTA+GGG | + | chr1.4:88280970-88280989 | MS.gene90781:CDS | 50.0% | |
| TCCAACCATCGACCCAATCA+AGG | + | chr1.4:88280775-88280794 | MS.gene90781:CDS | 50.0% | |
| TGTGATGGCTGCAAAACACG+TGG | + | chr1.4:88281036-88281055 | MS.gene90781:CDS | 50.0% | |
| TTATGCAGAGCGGAGGATTG+TGG | + | chr1.4:88282343-88282362 | MS.gene90781:CDS | 50.0% | |
| TTCGTCCAAAGGTAGAGTGG+TGG | + | chr1.4:88281102-88281121 | MS.gene90781:CDS | 50.0% | |
| ! | AAGGACCAGAGTGAGGGTTT+TGG | - | chr1.4:88280676-88280695 | None:intergenic | 50.0% |
| ! | ACTGCACTGGTGAAAGACAG+TGG | + | chr1.4:88284826-88284845 | MS.gene90781:CDS | 50.0% |
| ! | AGCTTGATAACAGGGAGGTG+GGG | + | chr1.4:88281182-88281201 | MS.gene90781:CDS | 50.0% |
| ! | CCGTTCTGTTTTCCCTTGTC+AGG | + | chr1.4:88280952-88280971 | MS.gene90781:CDS | 50.0% |
| ! | CTCATAACGAGTTGGACCGT+AGG | - | chr1.4:88283306-88283325 | None:intergenic | 50.0% |
| ! | GAACTTGCTCATAGCTGGAC+TGG | + | chr1.4:88281451-88281470 | MS.gene90781:CDS | 50.0% |
| ! | GAGCTTGATAACAGGGAGGT+GGG | + | chr1.4:88281181-88281200 | MS.gene90781:CDS | 50.0% |
| ! | GTACTGTGGACAGAAGGTAC+TGG | + | chr1.4:88282948-88282967 | MS.gene90781:CDS | 50.0% |
| ! | TGAGCTTGATAACAGGGAGG+TGG | + | chr1.4:88281180-88281199 | MS.gene90781:CDS | 50.0% |
| ! | TGGTGAGCTTGATAACAGGG+AGG | + | chr1.4:88281177-88281196 | MS.gene90781:CDS | 50.0% |
| ! | TTTCAAGGGAACGAGTGTCG+AGG | - | chr1.4:88280703-88280722 | None:intergenic | 50.0% |
| !! | CGGGCTCAAAAGCATCAGAT+GGG | - | chr1.4:88282977-88282996 | None:intergenic | 50.0% |
| !! | CTCCAACGGGCTATTTCATG+CGG | + | chr1.4:88284727-88284746 | MS.gene90781:CDS | 50.0% |
| !! | GAACGAGTGTCGAGGAAGAA+AGG | - | chr1.4:88280695-88280714 | None:intergenic | 50.0% |
| !! | GATGGTGTTTTTGACCCCGA+CGG | + | chr1.4:88281387-88281406 | MS.gene90781:CDS | 50.0% |
| !! | GGGATTGGAGTGGATTGAGA+AGG | - | chr1.4:88280743-88280762 | None:intergenic | 50.0% |
| !! | TCGGGCTCAAAAGCATCAGA+TGG | - | chr1.4:88282978-88282997 | None:intergenic | 50.0% |
| !!! | CGATTTTGGATAGTGGGCCA+TGG | - | chr1.4:88283740-88283759 | None:intergenic | 50.0% |
| AAATGGGAGGATGCCAAGGG+AGG | + | chr1.4:88283043-88283062 | MS.gene90781:CDS | 55.0% | |
| AAGAGCAGAGGAAGAAGGGG+AGG | - | chr1.4:88280858-88280877 | None:intergenic | 55.0% | |
| ATCCTACCTAGGATCGGGGA+GGG | + | chr1.4:88283213-88283232 | MS.gene90781:intron | 55.0% | |
| ATGAGCCACAACCTGTGCAC+CGG | - | chr1.4:88281431-88281450 | None:intergenic | 55.0% | |
| ATGGCTGGTGTGTCCTGACA+AGG | - | chr1.4:88280968-88280987 | None:intergenic | 55.0% | |
| CCCTTGATTGGGTCGATGGT+TGG | - | chr1.4:88280779-88280798 | None:intergenic | 55.0% | |
| CCGTCCACTTTACACTGCAC+TGG | + | chr1.4:88284813-88284832 | MS.gene90781:CDS | 55.0% | |
| CGGTAAATGGGAGGATGCCA+AGG | + | chr1.4:88283039-88283058 | MS.gene90781:CDS | 55.0% | |
| GTCAGGACACACCAGCCATT+AGG | + | chr1.4:88280969-88280988 | MS.gene90781:CDS | 55.0% | |
| TCAGGAGTGGGAGCTCTACT+TGG | + | chr1.4:88283088-88283107 | MS.gene90781:CDS | 55.0% | |
| TGAGTGGCAAGGTCAGGAGT+GGG | + | chr1.4:88283076-88283095 | MS.gene90781:CDS | 55.0% | |
| TGGCTGGTGTGTCCTGACAA+GGG | - | chr1.4:88280967-88280986 | None:intergenic | 55.0% | |
| TGGGTCGATGGTTGGAGAGA+GGG | - | chr1.4:88280771-88280790 | None:intergenic | 55.0% | |
| TTGGGTCGATGGTTGGAGAG+AGG | - | chr1.4:88280772-88280791 | None:intergenic | 55.0% | |
| ! | AAAGCTCGGTGGAAGGTTGG+CGG | + | chr1.4:88284608-88284627 | MS.gene90781:intron | 55.0% |
| ! | GAGAAGGGTCAGTGATGGAG+TGG | - | chr1.4:88280727-88280746 | None:intergenic | 55.0% |
| AGCAGAGGAAGAAGGGGAGG+TGG | - | chr1.4:88280855-88280874 | None:intergenic | 60.0% | |
| CATCCTACCTAGGATCGGGG+AGG | + | chr1.4:88283212-88283231 | MS.gene90781:intron | 60.0% | |
| CTGAGTGGCAAGGTCAGGAG+TGG | + | chr1.4:88283075-88283094 | MS.gene90781:CDS | 60.0% | |
| TCCTACCTAGGATCGGGGAG+GGG | + | chr1.4:88283214-88283233 | MS.gene90781:intron | 60.0% | |
| TGCAACCGGTGCACAGGTTG+TGG | + | chr1.4:88281423-88281442 | MS.gene90781:CDS | 60.0% | |
| TGCAGAGCGGAGGATTGTGG+AGG | + | chr1.4:88282346-88282365 | MS.gene90781:CDS | 60.0% | |
| AGGGGATGCAACCGGTGCAC+AGG | + | chr1.4:88281417-88281436 | MS.gene90781:CDS | 65.0% | |
| ATAACAGGGAGGTGGGGCCC+AGG | + | chr1.4:88281188-88281207 | MS.gene90781:CDS | 65.0% | |
| CCTACCTAGGATCGGGGAGG+GGG | + | chr1.4:88283215-88283234 | MS.gene90781:intron | 65.0% | |
| CGTGGTGCGTCGCGAATCGT+TGG | + | chr1.4:88281054-88281073 | MS.gene90781:CDS | 65.0% | |
| CCCCCTCCCCGATCCTAGGT+AGG | - | chr1.4:88283218-88283237 | None:intergenic | 70.0% | |
| GCAACCCCCTCCCCGATCCT+AGG | - | chr1.4:88283222-88283241 | None:intergenic | 70.0% | |
| GGAGGTGGGGCCCAGGACTA+GGG | + | chr1.4:88281195-88281214 | MS.gene90781:CDS | 70.0% | |
| GGGAGGTGGGGCCCAGGACT+AGG | + | chr1.4:88281194-88281213 | MS.gene90781:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 88280551 | 88284957 | 88280551 | ID=MS.gene90781 |
| chr1.4 | mRNA | 88280551 | 88284957 | 88280551 | ID=MS.gene90781.t1;Parent=MS.gene90781 |
| chr1.4 | exon | 88280551 | 88281519 | 88280551 | ID=MS.gene90781.t1.exon1;Parent=MS.gene90781.t1 |
| chr1.4 | CDS | 88280551 | 88281519 | 88280551 | ID=cds.MS.gene90781.t1;Parent=MS.gene90781.t1 |
| chr1.4 | exon | 88282332 | 88282565 | 88282332 | ID=MS.gene90781.t1.exon2;Parent=MS.gene90781.t1 |
| chr1.4 | CDS | 88282332 | 88282565 | 88282332 | ID=cds.MS.gene90781.t1;Parent=MS.gene90781.t1 |
| chr1.4 | exon | 88282816 | 88283142 | 88282816 | ID=MS.gene90781.t1.exon3;Parent=MS.gene90781.t1 |
| chr1.4 | CDS | 88282816 | 88283142 | 88282816 | ID=cds.MS.gene90781.t1;Parent=MS.gene90781.t1 |
| chr1.4 | exon | 88284661 | 88284957 | 88284661 | ID=MS.gene90781.t1.exon4;Parent=MS.gene90781.t1 |
| chr1.4 | CDS | 88284661 | 88284957 | 88284661 | ID=cds.MS.gene90781.t1;Parent=MS.gene90781.t1 |
| Gene Sequence |
| Protein sequence |
