Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061297.t1 | XP_013455691.1 | 97.4 | 586 | 15 | 0 | 1 | 586 | 1 | 586 | 1.90E-260 | 908.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061297.t1 | B7ZWR6 | 47.3 | 596 | 262 | 4 | 1 | 586 | 1 | 554 | 2.9e-97 | 357.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061297.t1 | A0A072UJ56 | 97.4 | 586 | 15 | 0 | 1 | 586 | 1 | 586 | 1.3e-260 | 908.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060522 | MS.gene061297 | 0.816737 | 4.74E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061297.t1 | MTR_4g050120 | 97.952 | 586 | 12 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1175 |
| MS.gene061297.t1 | MTR_4g039430 | 33.125 | 160 | 99 | 2 | 70 | 221 | 151 | 310 | 1.34e-13 | 73.2 |
| MS.gene061297.t1 | MTR_2g090135 | 32.174 | 115 | 76 | 1 | 107 | 221 | 102 | 214 | 2.00e-11 | 65.1 |
| MS.gene061297.t1 | MTR_7g059150 | 30.263 | 152 | 100 | 3 | 60 | 209 | 52 | 199 | 2.43e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061297.t1 | AT5G21990 | 59.423 | 589 | 199 | 8 | 1 | 585 | 1 | 553 | 0.0 | 659 |
| MS.gene061297.t1 | AT3G21640 | 30.909 | 165 | 106 | 2 | 70 | 226 | 146 | 310 | 1.38e-12 | 70.1 |
| MS.gene061297.t1 | AT5G48570 | 30.496 | 141 | 92 | 1 | 93 | 227 | 400 | 540 | 1.28e-11 | 67.8 |
| MS.gene061297.t1 | AT4G30480 | 35.652 | 115 | 72 | 1 | 100 | 214 | 102 | 214 | 1.70e-11 | 65.5 |
| MS.gene061297.t1 | AT1G58450 | 34.091 | 132 | 80 | 2 | 99 | 224 | 6 | 136 | 2.96e-11 | 62.8 |
Find 119 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTCTCTGATGTTGATTT+TGG | 0.104192 | 4.2:+51575778 | None:intergenic |
| TGCAATATGCATGCTCATTT+TGG | 0.121178 | 4.2:-51573585 | MS.gene061297:CDS |
| AACGCATTGTTAGAAGAATT+TGG | 0.202893 | 4.2:+51575183 | None:intergenic |
| CCCATGTTTGCCATCACTTC+CGG | 0.224064 | 4.2:+51574320 | None:intergenic |
| GAAATGGCATCCTTACTAAA+AGG | 0.227081 | 4.2:-51575306 | MS.gene061297:CDS |
| CGACATTTGAAATGAAGTTT+TGG | 0.259058 | 4.2:+51575613 | None:intergenic |
| TCAAGCACCACTCGTGCTTT+TGG | 0.261508 | 4.2:-51575210 | MS.gene061297:CDS |
| ACCAGAGAACTTGGATAAAA+TGG | 0.264066 | 4.2:-51574228 | MS.gene061297:intron |
| CCATGTTTGCCATCACTTCC+GGG | 0.272628 | 4.2:+51574321 | None:intergenic |
| TCCAACTACCTGATGGCTTC+TGG | 0.279215 | 4.2:+51575736 | None:intergenic |
| GAGGATGCTTTAATCATATC+TGG | 0.279365 | 4.2:+51575540 | None:intergenic |
| CATTGTCTTCACAGATGCTT+TGG | 0.285762 | 4.2:-51573685 | MS.gene061297:intron |
| ACTCTGGCTTCTTTAAATAA+TGG | 0.300399 | 4.2:-51575582 | MS.gene061297:CDS |
| TCAAAGTAGAAAGCTTCTTT+TGG | 0.327072 | 4.2:-51577161 | MS.gene061297:CDS |
| CGCATAGCTGCTACTTCTTC+GGG | 0.331553 | 4.2:+51578020 | None:intergenic |
| ATACTTGAGGATGGGAAGTT+TGG | 0.333082 | 4.2:+51575135 | None:intergenic |
| CATATCTGGAGACACATCTT+TGG | 0.341511 | 4.2:+51575554 | None:intergenic |
| TCGAAGAGGTCAAGCGTATA+AGG | 0.350697 | 4.2:-51576720 | MS.gene061297:CDS |
| GCAAACATGGGAGAGCAATT+TGG | 0.351085 | 4.2:-51574308 | MS.gene061297:CDS |
| GAAGACGAGAGTGTGCCTTC+TGG | 0.351351 | 4.2:-51575895 | MS.gene061297:CDS |
| CCAATCTCAGCCATCTCTTC+AGG | 0.355137 | 4.2:+51578065 | None:intergenic |
| AGCTTTCTACTTTGAAAAGA+TGG | 0.370939 | 4.2:+51577169 | None:intergenic |
| ATCCAAGTTCTCTGGTGATA+AGG | 0.372718 | 4.2:+51574235 | None:intergenic |
| TCGTATGTCACCTGCTGATA+TGG | 0.373633 | 4.2:-51578899 | MS.gene061297:CDS |
| TGAGCGATTCGGATCAAATC+AGG | 0.378317 | 4.2:+51578934 | None:intergenic |
| TCATAATTCAAAATGTTTAA+CGG | 0.383982 | 4.2:-51578967 | None:intergenic |
| AACATCTTCTTAAGCTCATC+TGG | 0.386421 | 4.2:+51575330 | None:intergenic |
| ACGCATAGCTGCTACTTCTT+CGG | 0.389147 | 4.2:+51578019 | None:intergenic |
| TTCCTTTATCAACTGTTCCT+TGG | 0.396891 | 4.2:+51576086 | None:intergenic |
| CACAGATGCTTTGGGCGGAC+AGG | 0.397440 | 4.2:-51573676 | MS.gene061297:intron |
| GCATAGCTGGATCTTTCATC+TGG | 0.402392 | 4.2:+51575088 | None:intergenic |
| CTGCCTTGTCTTCAAGTAAC+AGG | 0.403213 | 4.2:+51577117 | None:intergenic |
| TTTGCAGATGTTCACATCAA+TGG | 0.412865 | 4.2:-51574357 | MS.gene061297:intron |
| GACATGGCATCTTCATTTCA+AGG | 0.413677 | 4.2:-51575471 | MS.gene061297:CDS |
| ATCCTTATCACCAGAGAACT+TGG | 0.418317 | 4.2:-51574237 | MS.gene061297:CDS |
| CAAAATGTTTAACGGTATGA+TGG | 0.422343 | 4.2:-51578959 | None:intergenic |
| AACATATCGGGTGTCACGTT+GGG | 0.422526 | 4.2:+51575387 | None:intergenic |
| AACTGGTTGCTAGGAAGATC+AGG | 0.423326 | 4.2:-51573617 | MS.gene061297:CDS |
| TACCAAGGAACAGTTGATAA+AGG | 0.423449 | 4.2:-51576088 | MS.gene061297:CDS |
| AGAAGCAGCAAAAGCTCAGC+AGG | 0.432548 | 4.2:-51574267 | MS.gene061297:CDS |
| GCTTTCATTCTTCACCGGTC+AGG | 0.432561 | 4.2:-51573563 | MS.gene061297:CDS |
| GAACATACCTGCCGCATAGC+TGG | 0.437480 | 4.2:+51575075 | None:intergenic |
| ATTGTCTTCACAGATGCTTT+GGG | 0.443361 | 4.2:-51573684 | MS.gene061297:intron |
| CCCGGAAGTGATGGCAAACA+TGG | 0.447973 | 4.2:-51574321 | MS.gene061297:CDS |
| TTGTCCACAGCTGCTGATGA+TGG | 0.450527 | 4.2:+51575270 | None:intergenic |
| CTTCACCGGTCAGGTTTCAT+TGG | 0.454639 | 4.2:-51573554 | MS.gene061297:CDS |
| TCATCTGTTCTTGAGCGATT+CGG | 0.455029 | 4.2:+51578923 | None:intergenic |
| AAAGCATCCTCTGAAATGAT+TGG | 0.458610 | 4.2:-51575528 | MS.gene061297:CDS |
| AAATGGCATCCTTACTAAAA+GGG | 0.458669 | 4.2:-51575305 | MS.gene061297:CDS |
| GCTTAAGAAGATGTTTGAAA+TGG | 0.466002 | 4.2:-51575322 | MS.gene061297:CDS |
| TTTAAAGAAGCCAGAGTGGC+AGG | 0.468824 | 4.2:+51575588 | None:intergenic |
| ACGTTGGGAGGAATAGATCC+TGG | 0.479389 | 4.2:+51575402 | None:intergenic |
| CCTGAAGAGATGGCTGAGAT+TGG | 0.480745 | 4.2:-51578065 | MS.gene061297:CDS |
| TGTAAATCAATACTTGAGGA+TGG | 0.486305 | 4.2:+51575126 | None:intergenic |
| AATGCAGTTGAAGTGTCTTC+TGG | 0.487171 | 4.2:-51576565 | MS.gene061297:CDS |
| GCACGAGTGGTGCTTGAGGA+TGG | 0.495589 | 4.2:+51575216 | None:intergenic |
| TGGGTTGAAAGGAGAATTAG+AGG | 0.501276 | 4.2:+51575422 | None:intergenic |
| TGCATTGCTCAAATCAGAAA+CGG | 0.502265 | 4.2:+51576582 | None:intergenic |
| GTAAAAGTATAGCTAACAAT+GGG | 0.503673 | 4.2:-51575804 | MS.gene061297:CDS |
| GCGTGCTCATGCTGATGCTC+AGG | 0.505860 | 4.2:-51578000 | MS.gene061297:CDS |
| AAATGTCGATCCTGCCACTC+TGG | 0.509523 | 4.2:-51575598 | MS.gene061297:CDS |
| GGAATAGATCCTGGGTTGAA+AGG | 0.511847 | 4.2:+51575411 | None:intergenic |
| ACTTGAAGCTTACATGTAGC+TGG | 0.517400 | 4.2:+51576690 | None:intergenic |
| AAATATGAGCCCGGAAGTGA+TGG | 0.518694 | 4.2:-51574330 | MS.gene061297:CDS |
| GTGTTAAAAGAACAAAGAAC+TGG | 0.522183 | 4.2:-51573634 | MS.gene061297:CDS |
| GAAGCCATCCTCATCAACTC+TGG | 0.527021 | 4.2:+51578155 | None:intergenic |
| AGAACAAAGAACTGGTTGCT+AGG | 0.527330 | 4.2:-51573626 | MS.gene061297:CDS |
| GGCTGAGATTGGTCAGAAGA+TGG | 0.530746 | 4.2:-51578054 | MS.gene061297:CDS |
| TATGGCTCGGATCCAACAAC+AGG | 0.531044 | 4.2:-51578881 | MS.gene061297:intron |
| TATGAAGAATGCATAAAAGA+AGG | 0.539549 | 4.2:-51577094 | MS.gene061297:CDS |
| TCTAATTCTCCTTTCAACCC+AGG | 0.545074 | 4.2:-51575420 | MS.gene061297:CDS |
| CACGAGTGGTGCTTGAGGAT+GGG | 0.545236 | 4.2:+51575217 | None:intergenic |
| AGGTCAAATATCAATTGAGT+GGG | 0.550505 | 4.2:-51577980 | MS.gene061297:CDS |
| ACATGGCATCTTCATTTCAA+GGG | 0.551051 | 4.2:-51575470 | MS.gene061297:CDS |
| GCATACACGGCCTGAAGAGA+TGG | 0.552117 | 4.2:-51578075 | MS.gene061297:CDS |
| TGCTTTGCAGAAGTATAAGC+TGG | 0.557423 | 4.2:-51577341 | MS.gene061297:intron |
| CATCTTGCCAATCATTTCAG+AGG | 0.558168 | 4.2:+51575521 | None:intergenic |
| AGTAAAAGTATAGCTAACAA+TGG | 0.558440 | 4.2:-51575805 | MS.gene061297:CDS |
| GTAAATCAATACTTGAGGAT+GGG | 0.560855 | 4.2:+51575127 | None:intergenic |
| GGTCAAGCGTATAAGGAACT+AGG | 0.561497 | 4.2:-51576713 | MS.gene061297:CDS |
| GAGCTTCTGTTGTTTCCAGA+AGG | 0.565295 | 4.2:+51575880 | None:intergenic |
| TGTCACCTGCTGATATGGCT+CGG | 0.567453 | 4.2:-51578894 | MS.gene061297:CDS |
| TGGATCCGAGCCATATCAGC+AGG | 0.568608 | 4.2:+51578889 | None:intergenic |
| ATTTGGTTTCAAGCTTTCAC+CGG | 0.570135 | 4.2:-51574291 | MS.gene061297:CDS |
| CATGGCATCTTCATTTCAAG+GGG | 0.572448 | 4.2:-51575469 | MS.gene061297:CDS |
| TATTCCATCATCAGCAGCTG+TGG | 0.573404 | 4.2:-51575274 | MS.gene061297:CDS |
| GAAAGATCCAGCTATGCGGC+AGG | 0.573511 | 4.2:-51575082 | MS.gene061297:intron |
| GAAATGTACTTCACAGTCAA+GGG | 0.574148 | 4.2:-51577375 | MS.gene061297:CDS |
| TTCTTGTAAATCAATACTTG+AGG | 0.577474 | 4.2:+51575122 | None:intergenic |
| GGAAATGTACTTCACAGTCA+AGG | 0.579368 | 4.2:-51577376 | MS.gene061297:CDS |
| GGCTGAGATGTTGAAGAACC+AGG | 0.580395 | 4.2:-51577958 | MS.gene061297:intron |
| AAGGAACAGTTGATAAAGGA+AGG | 0.585297 | 4.2:-51576084 | MS.gene061297:CDS |
| AAACATATCGGGTGTCACGT+TGG | 0.587031 | 4.2:+51575386 | None:intergenic |
| CTCAAGGCTCTTTATCGAAG+AGG | 0.590592 | 4.2:-51576734 | MS.gene061297:CDS |
| AGCTACCAATGAAACCTGAC+CGG | 0.591426 | 4.2:+51573549 | None:intergenic |
| AAAAGCACGAGTGGTGCTTG+AGG | 0.596811 | 4.2:+51575212 | None:intergenic |
| CAGGTCAAATATCAATTGAG+TGG | 0.598786 | 4.2:-51577981 | MS.gene061297:CDS |
| CTGAACAGTTAAAGCATACA+CGG | 0.600360 | 4.2:-51578088 | MS.gene061297:CDS |
| CGTTGGGAGGAATAGATCCT+GGG | 0.606020 | 4.2:+51575403 | None:intergenic |
| ATATCGGGTGTCACGTTGGG+AGG | 0.610636 | 4.2:+51575390 | None:intergenic |
| TAATCCAGAGTTGATGAGGA+TGG | 0.614927 | 4.2:-51578159 | MS.gene061297:CDS |
| TGGTTCTCCAAAAGCACGAG+TGG | 0.624329 | 4.2:+51575203 | None:intergenic |
| ATGCATAAAAGAAGGTTCTG+AGG | 0.626114 | 4.2:-51577086 | MS.gene061297:intron |
| TGTTTGTTTCAGGGATACCA+AGG | 0.629709 | 4.2:-51576103 | MS.gene061297:intron |
| TGTCCTGTTACTTGAAGACA+AGG | 0.630117 | 4.2:-51577120 | MS.gene061297:CDS |
| GTCTTCACAGATGCTTTGGG+CGG | 0.631153 | 4.2:-51573681 | MS.gene061297:intron |
| ATATGATGCAAAGAACCTCA+AGG | 0.636392 | 4.2:-51576750 | MS.gene061297:CDS |
| CCGGAAGTGATGGCAAACAT+GGG | 0.645744 | 4.2:-51574320 | MS.gene061297:CDS |
| ATTATTTAAAGAAGCCAGAG+TGG | 0.646867 | 4.2:+51575584 | None:intergenic |
| TGGGCGGACAGGCTTCAAAG+AGG | 0.651327 | 4.2:-51573665 | MS.gene061297:CDS |
| GCATGCATATTGCAAAGACA+AGG | 0.656347 | 4.2:+51573594 | None:intergenic |
| ACTTCAGAAAATGCTTGACA+TGG | 0.665007 | 4.2:-51575487 | MS.gene061297:CDS |
| ATCTTCTTAAGCTCATCTGG+TGG | 0.671873 | 4.2:+51575333 | None:intergenic |
| CTCTTCGATAAAGAGCCTTG+AGG | 0.680295 | 4.2:+51576735 | None:intergenic |
| TGTCTAATCCAGAGTTGATG+AGG | 0.680638 | 4.2:-51578163 | MS.gene061297:CDS |
| GAACAGTTGATAAAGGAAGG+TGG | 0.706338 | 4.2:-51576081 | MS.gene061297:CDS |
| GATTGGCAAGATGTCACCTG+AGG | 0.722339 | 4.2:-51575511 | MS.gene061297:CDS |
| GGTCAAATATCAATTGAGTG+GGG | 0.726609 | 4.2:-51577979 | MS.gene061297:CDS |
| AGATGAAAGATCCAGCTATG+CGG | 0.731530 | 4.2:-51575086 | MS.gene061297:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTATAATCAGTTATT+AGG | + | chr4.2:51575035-51575054 | None:intergenic | 10.0% |
| !! | AAAATTATAATCAGTTATTA+GGG | + | chr4.2:51575034-51575053 | None:intergenic | 10.0% |
| !! | TAAACTTAGAAATTAAAATA+AGG | + | chr4.2:51578119-51578138 | None:intergenic | 10.0% |
| !!! | AATTTTAAATATTTTATCAC+TGG | + | chr4.2:51577572-51577591 | None:intergenic | 10.0% |
| !!! | AGTGATAAAATATTTAAAAT+TGG | - | chr4.2:51577571-51577590 | MS.gene061297:intron | 10.0% |
| !!! | ATAACTTCTTTTTTTAAAAA+AGG | - | chr4.2:51576329-51576348 | MS.gene061297:intron | 10.0% |
| !!! | GAATATAACTATTTTTTTTT+AGG | - | chr4.2:51576306-51576325 | MS.gene061297:intron | 10.0% |
| !!! | GATTTAAAATTAAATTTTAC+AGG | - | chr4.2:51575104-51575123 | MS.gene061297:CDS | 10.0% |
| !!! | TAACTTCTTTTTTTAAAAAA+GGG | - | chr4.2:51576330-51576349 | MS.gene061297:intron | 10.0% |
| !!! | TTTATTTTTTTAATTGATTG+TGG | - | chr4.2:51573803-51573822 | MS.gene061297:intron | 10.0% |
| !! | AAACCAAAGTAAATAATTAA+AGG | + | chr4.2:51577961-51577980 | None:intergenic | 15.0% |
| !! | AACCAAAGTAAATAATTAAA+GGG | + | chr4.2:51577960-51577979 | None:intergenic | 15.0% |
| !! | ATAAATTATGTATAGTACTT+CGG | + | chr4.2:51578054-51578073 | None:intergenic | 15.0% |
| !! | ATATACAAATATAATTGGAA+AGG | + | chr4.2:51577689-51577708 | None:intergenic | 15.0% |
| !! | ATTTATATAACTTTAGACTT+TGG | + | chr4.2:51578311-51578330 | None:intergenic | 15.0% |
| !! | TAATTGTATTATGTAAAAGT+AGG | - | chr4.2:51575594-51575613 | MS.gene061297:CDS | 15.0% |
| !! | TAGCTATTATTTAACAAAAT+TGG | - | chr4.2:51574010-51574029 | MS.gene061297:intron | 15.0% |
| !!! | AACTTCTTTTTTTAAAAAAG+GGG | - | chr4.2:51576331-51576350 | MS.gene061297:intron | 15.0% |
| !!! | AATTTCATTTTTGACATATA+TGG | - | chr4.2:51577802-51577821 | MS.gene061297:intron | 15.0% |
| !!! | ATTATTTTGGGAAAATTTAT+CGG | - | chr4.2:51575523-51575542 | MS.gene061297:CDS | 15.0% |
| !!! | ATTTAATTCAAGAGAAATTT+TGG | + | chr4.2:51577657-51577676 | None:intergenic | 15.0% |
| !!! | TTAATTTAATTTTACATTCC+AGG | - | chr4.2:51575287-51575306 | MS.gene061297:CDS | 15.0% |
| !! | AAAGAAAATAAAAAAGACCA+TGG | + | chr4.2:51574617-51574636 | None:intergenic | 20.0% |
| !! | AATTAACTATGAAATTGAGT+TGG | + | chr4.2:51573717-51573736 | None:intergenic | 20.0% |
| !! | AGTATTAGGATACATAATAA+AGG | - | chr4.2:51578697-51578716 | MS.gene061297:intron | 20.0% |
| !! | ATGTTCTTATTGATATAATG+TGG | - | chr4.2:51574271-51574290 | MS.gene061297:CDS | 20.0% |
| !! | CATAAACAAGAAGAAAAAAA+AGG | + | chr4.2:51575219-51575238 | None:intergenic | 20.0% |
| !! | TAATTAAATATTTGACCCAA+GGG | - | chr4.2:51577906-51577925 | MS.gene061297:intron | 20.0% |
| !! | TACCCTTTAATTATTTACTT+TGG | - | chr4.2:51577955-51577974 | MS.gene061297:intron | 20.0% |
| !! | TTAATTAAATATTTGACCCA+AGG | - | chr4.2:51577905-51577924 | MS.gene061297:intron | 20.0% |
| !! | TTCAAATGTAATTCCATTTA+TGG | + | chr4.2:51574916-51574935 | None:intergenic | 20.0% |
| !! | TTGTAGTAAATAACATATCT+CGG | - | chr4.2:51573947-51573966 | MS.gene061297:intron | 20.0% |
| !! | TTGTTCACATCAATATTTAA+TGG | - | chr4.2:51575875-51575894 | MS.gene061297:CDS | 20.0% |
| !!! | AAGTTGGGTTTTAAAAATTA+AGG | + | chr4.2:51574819-51574838 | None:intergenic | 20.0% |
| !!! | AATATTTTATCACTGGTATA+CGG | + | chr4.2:51577565-51577584 | None:intergenic | 20.0% |
| !!! | ACTTCTTTTTTTAAAAAAGG+GGG | - | chr4.2:51576332-51576351 | MS.gene061297:intron | 20.0% |
| !!! | CATTAATATGTGTGTTTTTT+TGG | - | chr4.2:51574156-51574175 | MS.gene061297:intron | 20.0% |
| !!! | TTATTTTCTGTTAAACTAGT+TGG | - | chr4.2:51575054-51575073 | MS.gene061297:intron | 20.0% |
| !!! | TTTATACACTTTTCTTTTAC+TGG | - | chr4.2:51578478-51578497 | MS.gene061297:intron | 20.0% |
| ! | AAATTTCTTTATAGTCTCCT+TGG | + | chr4.2:51575549-51575568 | None:intergenic | 25.0% |
| ! | AACACACATATTAATGTGTT+TGG | + | chr4.2:51574152-51574171 | None:intergenic | 25.0% |
| ! | AATCAATGTAAACAATGGAT+TGG | - | chr4.2:51576145-51576164 | MS.gene061297:intron | 25.0% |
| ! | AATTAATTACAGAAGAGGAA+TGG | + | chr4.2:51576283-51576302 | None:intergenic | 25.0% |
| ! | ATATATATTTACTACTGACC+TGG | + | chr4.2:51574565-51574584 | None:intergenic | 25.0% |
| ! | ATATTTATGACTGTTGTGAT+TGG | - | chr4.2:51576064-51576083 | MS.gene061297:CDS | 25.0% |
| ! | ATCTGTAGAATAAAAAGAGA+TGG | + | chr4.2:51576865-51576884 | None:intergenic | 25.0% |
| ! | ATTATGTATCCTAATACTAC+AGG | + | chr4.2:51578695-51578714 | None:intergenic | 25.0% |
| ! | ATTGGCAATTCTCTAATTAT+GGG | - | chr4.2:51576082-51576101 | MS.gene061297:CDS | 25.0% |
| ! | CAATCAATCAATGTAAACAA+TGG | - | chr4.2:51576140-51576159 | MS.gene061297:intron | 25.0% |
| ! | CATTAATGTTCTTCTAACTA+TGG | - | chr4.2:51575718-51575737 | MS.gene061297:intron | 25.0% |
| ! | CTCTAATAAAGGAGTTAATA+CGG | - | chr4.2:51576233-51576252 | MS.gene061297:intron | 25.0% |
| ! | CTTCAAATTAGAATCAATCT+TGG | + | chr4.2:51574056-51574075 | None:intergenic | 25.0% |
| ! | GTCAGTAGTAAATATATATC+AGG | - | chr4.2:51574566-51574585 | MS.gene061297:intron | 25.0% |
| ! | TATGAAGAATGCATAAAAGA+AGG | - | chr4.2:51575408-51575427 | MS.gene061297:CDS | 25.0% |
| ! | TCTCTAATTAATTACAGAAG+AGG | + | chr4.2:51576288-51576307 | None:intergenic | 25.0% |
| ! | TTCTTGTAAATCAATACTTG+AGG | + | chr4.2:51577383-51577402 | None:intergenic | 25.0% |
| !! | AACAAACTTTGTGTTTTCAT+TGG | - | chr4.2:51577769-51577788 | MS.gene061297:intron | 25.0% |
| !! | AGTAAAAGTATAGCTAACAA+TGG | - | chr4.2:51576697-51576716 | MS.gene061297:intron | 25.0% |
| !! | ATACAATTGCAGATCTTTTA+CGG | - | chr4.2:51575965-51575984 | MS.gene061297:intron | 25.0% |
| !! | ATATTTTATCACTGGTATAC+GGG | + | chr4.2:51577564-51577583 | None:intergenic | 25.0% |
| !! | GATTAGTTAGAGATATATCA+CGG | - | chr4.2:51578737-51578756 | MS.gene061297:intron | 25.0% |
| !! | GTAAAAGTATAGCTAACAAT+GGG | - | chr4.2:51576698-51576717 | MS.gene061297:intron | 25.0% |
| !! | GTAAGCAGTGATATTATTTT+GGG | - | chr4.2:51575511-51575530 | MS.gene061297:CDS | 25.0% |
| !! | TATTGATTGTCCTCTAATAA+AGG | - | chr4.2:51576222-51576241 | MS.gene061297:intron | 25.0% |
| !! | TGTAAGCAGTGATATTATTT+TGG | - | chr4.2:51575510-51575529 | MS.gene061297:CDS | 25.0% |
| !! | TTAAACAAAACTGCAACTTT+TGG | + | chr4.2:51577737-51577756 | None:intergenic | 25.0% |
| !! | TTTCATTTTGTCATTGCAAT+GGG | - | chr4.2:51575452-51575471 | MS.gene061297:CDS | 25.0% |
| !!! | ACTTGCAGTTTTAAACATAT+CGG | + | chr4.2:51577131-51577150 | None:intergenic | 25.0% |
| !!! | CTTCTTTTTTTAAAAAAGGG+GGG | - | chr4.2:51576333-51576352 | MS.gene061297:intron | 25.0% |
| !!! | GAATCCTCAAGATTTTAAAA+TGG | - | chr4.2:51574388-51574407 | MS.gene061297:intron | 25.0% |
| !!! | GACACTTTGAAATTACAAAA+GGG | + | chr4.2:51574720-51574739 | None:intergenic | 25.0% |
| !!! | GATGTGTTTTATTGTTGTTT+TGG | - | chr4.2:51574304-51574323 | MS.gene061297:CDS | 25.0% |
| !!! | TATGTCTATTTTGAGACTAA+AGG | - | chr4.2:51575235-51575254 | MS.gene061297:CDS | 25.0% |
| !!! | TTATGGCTCTAAATTTTTAG+TGG | - | chr4.2:51576522-51576541 | MS.gene061297:intron | 25.0% |
| AAAAATTACAGACCTGTTGT+TGG | + | chr4.2:51573636-51573655 | None:intergenic | 30.0% | |
| AAATGGCATCCTTACTAAAA+GGG | - | chr4.2:51577197-51577216 | MS.gene061297:intron | 30.0% | |
| AACGCATTGTTAGAAGAATT+TGG | + | chr4.2:51577322-51577341 | None:intergenic | 30.0% | |
| AAGAACATTAATGCATTGCT+GGG | + | chr4.2:51575711-51575730 | None:intergenic | 30.0% | |
| AATGGTTAAAAATATGAGCC+CGG | - | chr4.2:51578163-51578182 | MS.gene061297:CDS | 30.0% | |
| AATGTTCTTCTAACTATGGT+AGG | - | chr4.2:51575722-51575741 | MS.gene061297:intron | 30.0% | |
| ACAAGTACAAGATAATTCTG+CGG | - | chr4.2:51578450-51578469 | MS.gene061297:intron | 30.0% | |
| ACAGAAAGTAAATTCTTAGC+AGG | + | chr4.2:51575667-51575686 | None:intergenic | 30.0% | |
| AGGTCAAATATCAATTGAGT+GGG | - | chr4.2:51574522-51574541 | MS.gene061297:intron | 30.0% | |
| ATCTGACTATCTGCATATAT+TGG | - | chr4.2:51574792-51574811 | MS.gene061297:intron | 30.0% | |
| ATGAAAGTAAATCTCAGACA+TGG | + | chr4.2:51577998-51578017 | None:intergenic | 30.0% | |
| ATGCTTCCATCATGAAAAAT+CGG | + | chr4.2:51574769-51574788 | None:intergenic | 30.0% | |
| ATTATATTCCGAAAAATGCG+AGG | - | chr4.2:51577707-51577726 | MS.gene061297:intron | 30.0% | |
| ATTATTTAAAGAAGCCAGAG+TGG | + | chr4.2:51576921-51576940 | None:intergenic | 30.0% | |
| CAAAATTGGATATCTTGCAT+TGG | - | chr4.2:51574024-51574043 | MS.gene061297:intron | 30.0% | |
| CAAATTAGAATCAATCTTGG+AGG | + | chr4.2:51574053-51574072 | None:intergenic | 30.0% | |
| CATTGCAATGACAAAATGAA+AGG | + | chr4.2:51575453-51575472 | None:intergenic | 30.0% | |
| CCATAGAATGATAGAATGAA+TGG | - | chr4.2:51574947-51574966 | MS.gene061297:intron | 30.0% | |
| CCATTCATTCTATCATTCTA+TGG | + | chr4.2:51574950-51574969 | None:intergenic | 30.0% | |
| CGTATTAACTCCTTTATTAG+AGG | + | chr4.2:51576235-51576254 | None:intergenic | 30.0% | |
| CTACATGCATGATTCAAAAA+AGG | + | chr4.2:51576561-51576580 | None:intergenic | 30.0% | |
| CTTACCATCTTGTTAATCTT+AGG | + | chr4.2:51578359-51578378 | None:intergenic | 30.0% | |
| GAGAAGTGAAAGATGAAATT+TGG | + | chr4.2:51577512-51577531 | None:intergenic | 30.0% | |
| GATTGGCAATTCTCTAATTA+TGG | - | chr4.2:51576081-51576100 | MS.gene061297:CDS | 30.0% | |
| GCTTAAGAAGATGTTTGAAA+TGG | - | chr4.2:51577180-51577199 | MS.gene061297:CDS | 30.0% | |
| GTAAATCAATACTTGAGGAT+GGG | + | chr4.2:51577378-51577397 | None:intergenic | 30.0% | |
| GTGTTAAAAGAACAAAGAAC+TGG | - | chr4.2:51578868-51578887 | MS.gene061297:intron | 30.0% | |
| TAATATCACTGCTTACATGT+TGG | + | chr4.2:51575507-51575526 | None:intergenic | 30.0% | |
| TCAATATTTAATGGCATTCC+TGG | - | chr4.2:51575884-51575903 | MS.gene061297:CDS | 30.0% | |
| TGTAAATCAATACTTGAGGA+TGG | + | chr4.2:51577379-51577398 | None:intergenic | 30.0% | |
| TTAACAAGATGGTAAGATGA+AGG | - | chr4.2:51578363-51578382 | MS.gene061297:intron | 30.0% | |
| TTAATACGGTTGAAGTAAAC+TGG | - | chr4.2:51576247-51576266 | MS.gene061297:intron | 30.0% | |
| TTTGGTTACATTTCCTAGTA+TGG | + | chr4.2:51578394-51578413 | None:intergenic | 30.0% | |
| ! | AACCCTTTTCCTCAATTATT+TGG | - | chr4.2:51574876-51574895 | MS.gene061297:intron | 30.0% |
| ! | ACCCTTTTCCTCAATTATTT+GGG | - | chr4.2:51574877-51574896 | MS.gene061297:intron | 30.0% |
| ! | ACTCTGGCTTCTTTAAATAA+TGG | - | chr4.2:51576920-51576939 | MS.gene061297:intron | 30.0% |
| ! | AGATTCTTTCCCTTTTAGTA+AGG | + | chr4.2:51577209-51577228 | None:intergenic | 30.0% |
| ! | AGCTTTCTACTTTGAAAAGA+TGG | + | chr4.2:51575336-51575355 | None:intergenic | 30.0% |
| ! | CTTTCATTTTGTCATTGCAA+TGG | - | chr4.2:51575451-51575470 | MS.gene061297:CDS | 30.0% |
| ! | TAATTTTACATTCCAGGCTA+AGG | - | chr4.2:51575293-51575312 | MS.gene061297:CDS | 30.0% |
| ! | TCAAAGTAGAAAGCTTCTTT+TGG | - | chr4.2:51575341-51575360 | MS.gene061297:CDS | 30.0% |
| ! | TTACTGGTTGATATCACTTA+CGG | - | chr4.2:51578494-51578513 | MS.gene061297:intron | 30.0% |
| !! | CGACACTTTGAAATTACAAA+AGG | + | chr4.2:51574721-51574740 | None:intergenic | 30.0% |
| !! | CGACATTTGAAATGAAGTTT+TGG | + | chr4.2:51576892-51576911 | None:intergenic | 30.0% |
| !!! | AAACTCTCTGATGTTGATTT+TGG | + | chr4.2:51576727-51576746 | None:intergenic | 30.0% |
| !!! | CTTGCAGTTTTAAACATATC+GGG | + | chr4.2:51577130-51577149 | None:intergenic | 30.0% |
| !!! | TCCTCAAGATTTTAAAATGG+CGG | - | chr4.2:51574391-51574410 | MS.gene061297:intron | 30.0% |
| AAATTACCAACTACTCCCTT+GGG | + | chr4.2:51577924-51577943 | None:intergenic | 35.0% | |
| AACAGCTGATGACATCAAAA+AGG | + | chr4.2:51576383-51576402 | None:intergenic | 35.0% | |
| AACATCTTCTTAAGCTCATC+TGG | + | chr4.2:51577175-51577194 | None:intergenic | 35.0% | |
| AACCAAATTATGAAGCCTTG+AGG | - | chr4.2:51574850-51574869 | MS.gene061297:intron | 35.0% | |
| ACATGGCATCTTCATTTCAA+GGG | - | chr4.2:51577032-51577051 | MS.gene061297:intron | 35.0% | |
| ACCAGAGAACTTGGATAAAA+TGG | - | chr4.2:51578274-51578293 | MS.gene061297:intron | 35.0% | |
| ACTTCAGAAAATGCTTGACA+TGG | - | chr4.2:51577015-51577034 | MS.gene061297:intron | 35.0% | |
| ACTTTACTTGACTGTTACCT+TGG | - | chr4.2:51575191-51575210 | MS.gene061297:CDS | 35.0% | |
| AGCCCAAATAATTGAGGAAA+AGG | + | chr4.2:51574882-51574901 | None:intergenic | 35.0% | |
| ATATGATGCAAAGAACCTCA+AGG | - | chr4.2:51575752-51575771 | MS.gene061297:CDS | 35.0% | |
| ATGCATAAAAGAAGGTTCTG+AGG | - | chr4.2:51575416-51575435 | MS.gene061297:CDS | 35.0% | |
| ATGGTTTAGATTTGCAACAC+GGG | - | chr4.2:51578622-51578641 | MS.gene061297:intron | 35.0% | |
| ATGTATCCTAATACTACAGG+AGG | + | chr4.2:51578692-51578711 | None:intergenic | 35.0% | |
| ATTGTCTTCACAGATGCTTT+GGG | - | chr4.2:51578818-51578837 | MS.gene061297:intron | 35.0% | |
| CAATTATTTGGGCTTCAAGA+AGG | - | chr4.2:51574888-51574907 | MS.gene061297:intron | 35.0% | |
| CAGGTCAAATATCAATTGAG+TGG | - | chr4.2:51574521-51574540 | MS.gene061297:intron | 35.0% | |
| CATCTGTGAAGACAATGAAA+AGG | + | chr4.2:51578814-51578833 | None:intergenic | 35.0% | |
| CATGGTTTAGATTTGCAACA+CGG | - | chr4.2:51578621-51578640 | MS.gene061297:intron | 35.0% | |
| CTCATATACTCTCTCACATT+TGG | + | chr4.2:51578412-51578431 | None:intergenic | 35.0% | |
| CTGAACAGTTAAAGCATACA+CGG | - | chr4.2:51574414-51574433 | MS.gene061297:intron | 35.0% | |
| CTTCAAGAAGGATCCATAAA+TGG | - | chr4.2:51574900-51574919 | MS.gene061297:intron | 35.0% | |
| GAAATGGCATCCTTACTAAA+AGG | - | chr4.2:51577196-51577215 | MS.gene061297:CDS | 35.0% | |
| GAAATGTACTTCACAGTCAA+GGG | - | chr4.2:51575127-51575146 | MS.gene061297:CDS | 35.0% | |
| GAAGAACATTAATGCATTGC+TGG | + | chr4.2:51575712-51575731 | None:intergenic | 35.0% | |
| GAGGATGCTTTAATCATATC+TGG | + | chr4.2:51576965-51576984 | None:intergenic | 35.0% | |
| GAGTAAATGAAGGGTTCAAA+AGG | + | chr4.2:51576486-51576505 | None:intergenic | 35.0% | |
| GATAGAATGAATGGTCTGAT+CGG | - | chr4.2:51574956-51574975 | MS.gene061297:intron | 35.0% | |
| GCCCAAATAATTGAGGAAAA+GGG | + | chr4.2:51574881-51574900 | None:intergenic | 35.0% | |
| GCTATAACACATTTGTGTAG+CGG | + | chr4.2:51573899-51573918 | None:intergenic | 35.0% | |
| GGAGTAAATTCCACAATTCT+CGG | - | chr4.2:51574688-51574707 | MS.gene061297:intron | 35.0% | |
| GGTCAAATATCAATTGAGTG+GGG | - | chr4.2:51574523-51574542 | MS.gene061297:intron | 35.0% | |
| TAAACATGAAATGCAAGCCA+TGG | - | chr4.2:51574597-51574616 | MS.gene061297:intron | 35.0% | |
| TAATTACAGAAGAGGAATGG+AGG | + | chr4.2:51576280-51576299 | None:intergenic | 35.0% | |
| TCCAAACTTCTTGTATCCTT+CGG | + | chr4.2:51574671-51574690 | None:intergenic | 35.0% | |
| TCTTGAAGCCCAAATAATTG+AGG | + | chr4.2:51574888-51574907 | None:intergenic | 35.0% | |
| TGCACCTAAGATTAACAAGA+TGG | - | chr4.2:51578352-51578371 | MS.gene061297:intron | 35.0% | |
| TGCAGAATAACAAACACGTT+GGG | - | chr4.2:51578528-51578547 | MS.gene061297:intron | 35.0% | |
| TGCATTGCTCAAATCAGAAA+CGG | + | chr4.2:51575923-51575942 | None:intergenic | 35.0% | |
| TGTTGCAAATCTAAACCATG+CGG | + | chr4.2:51578621-51578640 | None:intergenic | 35.0% | |
| TTAGAGATATATCACGGACA+TGG | - | chr4.2:51578743-51578762 | MS.gene061297:intron | 35.0% | |
| TTCCTCAAGGCTTCATAATT+TGG | + | chr4.2:51574855-51574874 | None:intergenic | 35.0% | |
| TTCCTTTATCAACTGTTCCT+TGG | + | chr4.2:51576419-51576438 | None:intergenic | 35.0% | |
| TTTGCAGATGTTCACATCAA+TGG | - | chr4.2:51578145-51578164 | MS.gene061297:CDS | 35.0% | |
| ! | ACCATTTTATCCAAGTTCTC+TGG | + | chr4.2:51578278-51578297 | None:intergenic | 35.0% |
| ! | ATTTGGTTTCAAGCTTTCAC+CGG | - | chr4.2:51578211-51578230 | MS.gene061297:intron | 35.0% |
| ! | CACATTCCGATTTTTCATGA+TGG | - | chr4.2:51574760-51574779 | MS.gene061297:intron | 35.0% |
| ! | CTTTAATGTTTTCCTTAGCC+TGG | + | chr4.2:51575308-51575327 | None:intergenic | 35.0% |
| ! | GTTAACCAACTTTTCTTGAG+AGG | - | chr4.2:51577867-51577886 | MS.gene061297:intron | 35.0% |
| ! | TACTGGTTGATATCACTTAC+GGG | - | chr4.2:51578495-51578514 | MS.gene061297:intron | 35.0% |
| ! | TCTGAGATTTACTTTCATCC+TGG | - | chr4.2:51578000-51578019 | MS.gene061297:CDS | 35.0% |
| ! | TGCAATATGCATGCTCATTT+TGG | - | chr4.2:51578917-51578936 | MS.gene061297:CDS | 35.0% |
| !! | AAAGCATCCTCTGAAATGAT+TGG | - | chr4.2:51576974-51576993 | MS.gene061297:intron | 35.0% |
| !! | AAGGAACAGTTGATAAAGGA+AGG | - | chr4.2:51576418-51576437 | MS.gene061297:intron | 35.0% |
| !! | AGAAGAAAAAAAAGGTGCCA+AGG | + | chr4.2:51575211-51575230 | None:intergenic | 35.0% |
| !! | GGTTTTTCAGCAGAAAAGTT+GGG | + | chr4.2:51574834-51574853 | None:intergenic | 35.0% |
| !! | TACCAAGGAACAGTTGATAA+AGG | - | chr4.2:51576414-51576433 | MS.gene061297:intron | 35.0% |
| !! | TGGTTTTTCAGCAGAAAAGT+TGG | + | chr4.2:51574835-51574854 | None:intergenic | 35.0% |
| !! | TTTTAAAAAAGGGGGGAACT+CGG | - | chr4.2:51576340-51576359 | MS.gene061297:intron | 35.0% |
| !!! | GAAGAGTCACTGAACTTTTT+TGG | + | chr4.2:51576673-51576692 | None:intergenic | 35.0% |
| !!! | TGTTTTTTGAAGCTGAGTCT+TGG | - | chr4.2:51574213-51574232 | MS.gene061297:intron | 35.0% |
| !!! | TTTTGGCTTTCATTCTTCAC+CGG | - | chr4.2:51578934-51578953 | MS.gene061297:CDS | 35.0% |
| AAAAAGATCCAGAAGCCATC+AGG | - | chr4.2:51576758-51576777 | MS.gene061297:CDS | 40.0% | |
| AAGATGGTAAGATGAAGGTG+TGG | - | chr4.2:51578368-51578387 | MS.gene061297:intron | 40.0% | |
| ACTTGAAGCTTACATGTAGC+TGG | + | chr4.2:51575815-51575834 | None:intergenic | 40.0% | |
| AGAACAAAGAACTGGTTGCT+AGG | - | chr4.2:51578876-51578895 | MS.gene061297:intron | 40.0% | |
| AGATGAAAGATCCAGCTATG+CGG | - | chr4.2:51577416-51577435 | MS.gene061297:intron | 40.0% | |
| AGGAACCTCCTCCAAAAAAT+GGG | + | chr4.2:51577063-51577082 | None:intergenic | 40.0% | |
| ATACTTGAGGATGGGAAGTT+TGG | + | chr4.2:51577370-51577389 | None:intergenic | 40.0% | |
| ATCCAAGTTCTCTGGTGATA+AGG | + | chr4.2:51578270-51578289 | None:intergenic | 40.0% | |
| ATCCTTATCACCAGAGAACT+TGG | - | chr4.2:51578265-51578284 | MS.gene061297:intron | 40.0% | |
| ATCTTCTTAAGCTCATCTGG+TGG | + | chr4.2:51577172-51577191 | None:intergenic | 40.0% | |
| CATATCTGGAGACACATCTT+TGG | + | chr4.2:51576951-51576970 | None:intergenic | 40.0% | |
| CATCTTGCCAATCATTTCAG+AGG | + | chr4.2:51576984-51577003 | None:intergenic | 40.0% | |
| CATGGCATCTTCATTTCAAG+GGG | - | chr4.2:51577033-51577052 | MS.gene061297:intron | 40.0% | |
| CATTGTCTTCACAGATGCTT+TGG | - | chr4.2:51578817-51578836 | MS.gene061297:intron | 40.0% | |
| CGAAAATTCCAACTACCTGA+TGG | + | chr4.2:51576776-51576795 | None:intergenic | 40.0% | |
| CTATGAGAGATGCGAGTAAA+GGG | + | chr4.2:51576003-51576022 | None:intergenic | 40.0% | |
| GAAATTACCAACTACTCCCT+TGG | + | chr4.2:51577925-51577944 | None:intergenic | 40.0% | |
| GAAGGGTTCAAAAGGAAAAG+AGG | + | chr4.2:51576478-51576497 | None:intergenic | 40.0% | |
| GACATGGCATCTTCATTTCA+AGG | - | chr4.2:51577031-51577050 | MS.gene061297:intron | 40.0% | |
| GCATGCATATTGCAAAGACA+AGG | + | chr4.2:51578911-51578930 | None:intergenic | 40.0% | |
| GGAAATGTACTTCACAGTCA+AGG | - | chr4.2:51575126-51575145 | MS.gene061297:CDS | 40.0% | |
| GGCAATTCTCTAATTATGGG+TGG | - | chr4.2:51576085-51576104 | MS.gene061297:CDS | 40.0% | |
| GGTCTGATCGGAAATATACA+TGG | - | chr4.2:51574968-51574987 | MS.gene061297:intron | 40.0% | |
| GGTTCAAAAGGAAAAGAGGA+GGG | + | chr4.2:51576474-51576493 | None:intergenic | 40.0% | |
| GTCATCAGCTGTTTGTTTCA+GGG | - | chr4.2:51576390-51576409 | MS.gene061297:intron | 40.0% | |
| GTGCAGAATAACAAACACGT+TGG | - | chr4.2:51578527-51578546 | MS.gene061297:intron | 40.0% | |
| GTTCAAAAGGAAAAGAGGAG+GGG | + | chr4.2:51576473-51576492 | None:intergenic | 40.0% | |
| TAGAGCCATAAACTTAAGCG+AGG | + | chr4.2:51576513-51576532 | None:intergenic | 40.0% | |
| TATCACGGACATGGATATAG+AGG | - | chr4.2:51578752-51578771 | MS.gene061297:intron | 40.0% | |
| TCATCTGTTCTTGAGCGATT+CGG | + | chr4.2:51573582-51573601 | None:intergenic | 40.0% | |
| TCCGAAGGATACAAGAAGTT+TGG | - | chr4.2:51574667-51574686 | MS.gene061297:intron | 40.0% | |
| TCTAATTCTCCTTTCAACCC+AGG | - | chr4.2:51577082-51577101 | MS.gene061297:intron | 40.0% | |
| TGGTTGCATTTATTCTAGCC+AGG | + | chr4.2:51577492-51577511 | None:intergenic | 40.0% | |
| TGTCATCAGCTGTTTGTTTC+AGG | - | chr4.2:51576389-51576408 | MS.gene061297:intron | 40.0% | |
| TGTTTGTTTCAGGGATACCA+AGG | - | chr4.2:51576399-51576418 | MS.gene061297:intron | 40.0% | |
| TTGGGAAAATTTATCGGCCA+AGG | - | chr4.2:51575529-51575548 | MS.gene061297:CDS | 40.0% | |
| ! | AATGCAGTTGAAGTGTCTTC+TGG | - | chr4.2:51575937-51575956 | MS.gene061297:intron | 40.0% |
| ! | AGGAAAAGGGTTTTTCCTCA+AGG | + | chr4.2:51574868-51574887 | None:intergenic | 40.0% |
| ! | TGCTTTGCAGAAGTATAAGC+TGG | - | chr4.2:51575161-51575180 | MS.gene061297:CDS | 40.0% |
| ! | TGGGTTGAAAGGAGAATTAG+AGG | + | chr4.2:51577083-51577102 | None:intergenic | 40.0% |
| ! | TGTCCTGTTACTTGAAGACA+AGG | - | chr4.2:51575382-51575401 | MS.gene061297:CDS | 40.0% |
| ! | TTGCAGAAGTATAAGCTGGT+AGG | - | chr4.2:51575165-51575184 | MS.gene061297:CDS | 40.0% |
| ! | TTGGCATTCCTCGCATTTTT+CGG | + | chr4.2:51577718-51577737 | None:intergenic | 40.0% |
| !! | ACGTGTTTGTTATTCTGCAC+AGG | + | chr4.2:51578527-51578546 | None:intergenic | 40.0% |
| !! | GAACAGTTGATAAAGGAAGG+TGG | - | chr4.2:51576421-51576440 | MS.gene061297:intron | 40.0% |
| !! | TAATCCAGAGTTGATGAGGA+TGG | - | chr4.2:51574343-51574362 | MS.gene061297:CDS | 40.0% |
| !! | TCAAAGTGTCGCTGAGAATT+GGG | - | chr4.2:51574730-51574749 | MS.gene061297:intron | 40.0% |
| !! | TGTCTAATCCAGAGTTGATG+AGG | - | chr4.2:51574339-51574358 | MS.gene061297:CDS | 40.0% |
| !! | TTCAAAGTGTCGCTGAGAAT+TGG | - | chr4.2:51574729-51574748 | MS.gene061297:intron | 40.0% |
| !!! | AGCATTTTCTGAAGTTCCTC+AGG | + | chr4.2:51577010-51577029 | None:intergenic | 40.0% |
| !!! | CAGTTTTGTTTAACGCGAGA+AGG | - | chr4.2:51577744-51577763 | MS.gene061297:intron | 40.0% |
| !!! | GCCGCCATTTTAAAATCTTG+AGG | + | chr4.2:51574395-51574414 | None:intergenic | 40.0% |
| AAATATGAGCCCGGAAGTGA+TGG | - | chr4.2:51578172-51578191 | MS.gene061297:intron | 45.0% | |
| AACTGGTTGCTAGGAAGATC+AGG | - | chr4.2:51578885-51578904 | MS.gene061297:CDS | 45.0% | |
| ACAAGTGCACAACATTGACC+AGG | + | chr4.2:51578021-51578040 | None:intergenic | 45.0% | |
| AGCTACCAATGAAACCTGAC+CGG | + | chr4.2:51578956-51578975 | None:intergenic | 45.0% | |
| ATTTGACCCAAGGGAGTAGT+TGG | - | chr4.2:51577915-51577934 | MS.gene061297:intron | 45.0% | |
| CACTGCTTACATGTTGGAGA+TGG | + | chr4.2:51575501-51575520 | None:intergenic | 45.0% | |
| CATGGCACAAAAATCTGCCA+TGG | - | chr4.2:51578593-51578612 | MS.gene061297:intron | 45.0% | |
| CCATAAACTTAAGCGAGGCT+AGG | + | chr4.2:51576508-51576527 | None:intergenic | 45.0% | |
| CCTAGCCTCGCTTAAGTTTA+TGG | - | chr4.2:51576505-51576524 | MS.gene061297:intron | 45.0% | |
| CCTATGAGAGATGCGAGTAA+AGG | + | chr4.2:51576004-51576023 | None:intergenic | 45.0% | |
| CCTTTACTCGCATCTCTCAT+AGG | - | chr4.2:51576001-51576020 | MS.gene061297:intron | 45.0% | |
| CGAGGCTAGGAGTAAATGAA+GGG | + | chr4.2:51576495-51576514 | None:intergenic | 45.0% | |
| CTCAAGGCTCTTTATCGAAG+AGG | - | chr4.2:51575768-51575787 | MS.gene061297:CDS | 45.0% | |
| CTCTTCGATAAAGAGCCTTG+AGG | + | chr4.2:51575770-51575789 | None:intergenic | 45.0% | |
| CTGCCTTGTCTTCAAGTAAC+AGG | + | chr4.2:51575388-51575407 | None:intergenic | 45.0% | |
| GAGGAACCTCCTCCAAAAAA+TGG | + | chr4.2:51577064-51577083 | None:intergenic | 45.0% | |
| GAGTCTTGGTACGTAGGATT+AGG | - | chr4.2:51574227-51574246 | MS.gene061297:intron | 45.0% | |
| GCAAACATGGGAGAGCAATT+TGG | - | chr4.2:51578194-51578213 | MS.gene061297:intron | 45.0% | |
| GCACACCTCTCAAGAAAAGT+TGG | + | chr4.2:51577875-51577894 | None:intergenic | 45.0% | |
| GCATAGCTGGATCTTTCATC+TGG | + | chr4.2:51577417-51577436 | None:intergenic | 45.0% | |
| GGGTTCAAAAGGAAAAGAGG+AGG | + | chr4.2:51576475-51576494 | None:intergenic | 45.0% | |
| GGTCAAGCGTATAAGGAACT+AGG | - | chr4.2:51575789-51575808 | MS.gene061297:CDS | 45.0% | |
| GTGACATGAGATGAATCCGA+AGG | - | chr4.2:51574652-51574671 | MS.gene061297:intron | 45.0% | |
| TATTCCATCATCAGCAGCTG+TGG | - | chr4.2:51577228-51577247 | MS.gene061297:intron | 45.0% | |
| TATTCTAGCCAGGCATGTAG+AGG | + | chr4.2:51577482-51577501 | None:intergenic | 45.0% | |
| TCGAAGAGGTCAAGCGTATA+AGG | - | chr4.2:51575782-51575801 | MS.gene061297:CDS | 45.0% | |
| TCGTATGTCACCTGCTGATA+TGG | - | chr4.2:51573603-51573622 | MS.gene061297:CDS | 45.0% | |
| TTTAAAGAAGCCAGAGTGGC+AGG | + | chr4.2:51576917-51576936 | None:intergenic | 45.0% | |
| ! | AAACATATCGGGTGTCACGT+TGG | + | chr4.2:51577119-51577138 | None:intergenic | 45.0% |
| ! | AACATATCGGGTGTCACGTT+GGG | + | chr4.2:51577118-51577137 | None:intergenic | 45.0% |
| ! | ACGCATAGCTGCTACTTCTT+CGG | + | chr4.2:51574486-51574505 | None:intergenic | 45.0% |
| ! | ATGGCATTCCTGGTTTGTGT+AGG | - | chr4.2:51575894-51575913 | MS.gene061297:CDS | 45.0% |
| ! | GGAATAGATCCTGGGTTGAA+AGG | + | chr4.2:51577094-51577113 | None:intergenic | 45.0% |
| ! | TGAGCGATTCGGATCAAATC+AGG | + | chr4.2:51573571-51573590 | None:intergenic | 45.0% |
| !! | GAGCTTCTGTTGTTTCCAGA+AGG | + | chr4.2:51576625-51576644 | None:intergenic | 45.0% |
| !! | GGAACTCGGTCTTTAGAGTT+TGG | - | chr4.2:51576354-51576373 | MS.gene061297:intron | 45.0% |
| !! | TGAGCTTTTGCTGCTTCTTC+CGG | + | chr4.2:51578233-51578252 | None:intergenic | 45.0% |
| !!! | CAAGGGGACAACCCATTTTT+TGG | - | chr4.2:51577049-51577068 | MS.gene061297:intron | 45.0% |
| !!! | GACAACCCATTTTTTGGAGG+AGG | - | chr4.2:51577055-51577074 | MS.gene061297:intron | 45.0% |
| !! | ATATAATATACAAATATAAT+TGG | + | chr4.2:51577694-51577713 | None:intergenic | 5.0% |
| !!! | ATTTAAAATTAAATTTTACA+GGG | - | chr4.2:51575105-51575124 | MS.gene061297:CDS | 5.0% |
| AAATGTCGATCCTGCCACTC+TGG | - | chr4.2:51576904-51576923 | MS.gene061297:intron | 50.0% | |
| AACGGCTTCCTACACAAACC+AGG | + | chr4.2:51575905-51575924 | None:intergenic | 50.0% | |
| ACGTTGGGAGGAATAGATCC+TGG | + | chr4.2:51577103-51577122 | None:intergenic | 50.0% | |
| AGAAGCAGCAAAAGCTCAGC+AGG | - | chr4.2:51578235-51578254 | MS.gene061297:intron | 50.0% | |
| AGCAGTCCCAGTGTTTCCAA+TGG | - | chr4.2:51578559-51578578 | MS.gene061297:intron | 50.0% | |
| AGGAGGGGAACACATACTTC+TGG | + | chr4.2:51576458-51576477 | None:intergenic | 50.0% | |
| AGGGTGTACTCCGAGAATTG+TGG | + | chr4.2:51574701-51574720 | None:intergenic | 50.0% | |
| AGTGTTTCCAATGGGTGGGA+TGG | - | chr4.2:51578568-51578587 | MS.gene061297:intron | 50.0% | |
| ATCCCACCCATTGGAAACAC+TGG | + | chr4.2:51578569-51578588 | None:intergenic | 50.0% | |
| CACTGGTATACGGGACTAGA+GGG | + | chr4.2:51577555-51577574 | None:intergenic | 50.0% | |
| CCAATCTCAGCCATCTCTTC+AGG | + | chr4.2:51574440-51574459 | None:intergenic | 50.0% | |
| CCATGTTTGCCATCACTTCC+GGG | + | chr4.2:51578184-51578203 | None:intergenic | 50.0% | |
| CCCATGTTTGCCATCACTTC+CGG | + | chr4.2:51578185-51578204 | None:intergenic | 50.0% | |
| CCGGAAGTGATGGCAAACAT+GGG | - | chr4.2:51578182-51578201 | MS.gene061297:intron | 50.0% | |
| CCTGAAGAGATGGCTGAGAT+TGG | - | chr4.2:51574437-51574456 | MS.gene061297:intron | 50.0% | |
| CGTTGGGAGGAATAGATCCT+GGG | + | chr4.2:51577102-51577121 | None:intergenic | 50.0% | |
| CTTCACCGGTCAGGTTTCAT+TGG | - | chr4.2:51578948-51578967 | MS.gene061297:CDS | 50.0% | |
| GAAGCCATCCTCATCAACTC+TGG | + | chr4.2:51574350-51574369 | None:intergenic | 50.0% | |
| GAAGCTGAGTCTTGGTACGT+AGG | - | chr4.2:51574221-51574240 | MS.gene061297:intron | 50.0% | |
| GATTGGCAAGATGTCACCTG+AGG | - | chr4.2:51576991-51577010 | MS.gene061297:intron | 50.0% | |
| GCAGTCCCAGTGTTTCCAAT+GGG | - | chr4.2:51578560-51578579 | MS.gene061297:intron | 50.0% | |
| GCGAGGCTAGGAGTAAATGA+AGG | + | chr4.2:51576496-51576515 | None:intergenic | 50.0% | |
| GCTTTCATTCTTCACCGGTC+AGG | - | chr4.2:51578939-51578958 | MS.gene061297:CDS | 50.0% | |
| GGAGGGGAACACATACTTCT+GGG | + | chr4.2:51576457-51576476 | None:intergenic | 50.0% | |
| GGCTGAGATGTTGAAGAACC+AGG | - | chr4.2:51574544-51574563 | MS.gene061297:intron | 50.0% | |
| TCACTGGTATACGGGACTAG+AGG | + | chr4.2:51577556-51577575 | None:intergenic | 50.0% | |
| TCATCAGTGCCATGCCTAGT+AGG | - | chr4.2:51578655-51578674 | MS.gene061297:intron | 50.0% | |
| TCCAACTACCTGATGGCTTC+TGG | + | chr4.2:51576769-51576788 | None:intergenic | 50.0% | |
| TCCAGAAGCCATCAGGTAGT+TGG | - | chr4.2:51576765-51576784 | MS.gene061297:intron | 50.0% | |
| TCCCACCCATTGGAAACACT+GGG | + | chr4.2:51578568-51578587 | None:intergenic | 50.0% | |
| TCCCAGTGTTTCCAATGGGT+GGG | - | chr4.2:51578564-51578583 | MS.gene061297:intron | 50.0% | |
| TGTCACCTGCTGATATGGCT+CGG | - | chr4.2:51573608-51573627 | MS.gene061297:CDS | 50.0% | |
| TTGTCCACAGCTGCTGATGA+TGG | + | chr4.2:51577235-51577254 | None:intergenic | 50.0% | |
| ! | AAAAGCACGAGTGGTGCTTG+AGG | + | chr4.2:51577293-51577312 | None:intergenic | 50.0% |
| ! | CGCATAGCTGCTACTTCTTC+GGG | + | chr4.2:51574485-51574504 | None:intergenic | 50.0% |
| ! | GATGAAGGTGTGGCCATACT+AGG | - | chr4.2:51578378-51578397 | MS.gene061297:intron | 50.0% |
| ! | GGCTGAGATTGGTCAGAAGA+TGG | - | chr4.2:51574448-51574467 | MS.gene061297:intron | 50.0% |
| ! | GTCTTCACAGATGCTTTGGG+CGG | - | chr4.2:51578821-51578840 | MS.gene061297:intron | 50.0% |
| ! | TATGGCTCGGATCCAACAAC+AGG | - | chr4.2:51573621-51573640 | MS.gene061297:CDS | 50.0% |
| ! | TCAAGCACCACTCGTGCTTT+TGG | - | chr4.2:51577292-51577311 | MS.gene061297:intron | 50.0% |
| ! | TGGTTCTCCAAAAGCACGAG+TGG | + | chr4.2:51577302-51577321 | None:intergenic | 50.0% |
| !! | CATGGCACTGATGACATGCT+AGG | + | chr4.2:51578649-51578668 | None:intergenic | 50.0% |
| !!! | GGGGACAACCCATTTTTTGG+AGG | - | chr4.2:51577052-51577071 | MS.gene061297:intron | 50.0% |
| ATCTAAACCATGCGGCGCCA+TGG | + | chr4.2:51578613-51578632 | None:intergenic | 55.0% | |
| CACGAGTGGTGCTTGAGGAT+GGG | + | chr4.2:51577288-51577307 | None:intergenic | 55.0% | |
| CCATGCCTAGTAGGACCATG+GGG | - | chr4.2:51578664-51578683 | MS.gene061297:intron | 55.0% | |
| CCCGGAAGTGATGGCAAACA+TGG | - | chr4.2:51578181-51578200 | MS.gene061297:intron | 55.0% | |
| CTAGCCAGGCATGTAGAGGA+AGG | + | chr4.2:51577478-51577497 | None:intergenic | 55.0% | |
| GAAAGATCCAGCTATGCGGC+AGG | - | chr4.2:51577420-51577439 | MS.gene061297:intron | 55.0% | |
| GAACATACCTGCCGCATAGC+TGG | + | chr4.2:51577430-51577449 | None:intergenic | 55.0% | |
| GCATACACGGCCTGAAGAGA+TGG | - | chr4.2:51574427-51574446 | MS.gene061297:intron | 55.0% | |
| GCATCCTTCCTCTACATGCC+TGG | - | chr4.2:51577471-51577490 | MS.gene061297:intron | 55.0% | |
| GCCATGCCTAGTAGGACCAT+GGG | - | chr4.2:51578663-51578682 | MS.gene061297:intron | 55.0% | |
| GTCCCAGTGTTTCCAATGGG+TGG | - | chr4.2:51578563-51578582 | MS.gene061297:intron | 55.0% | |
| TGCCATGCCTAGTAGGACCA+TGG | - | chr4.2:51578662-51578681 | MS.gene061297:intron | 55.0% | |
| TGGATCCGAGCCATATCAGC+AGG | + | chr4.2:51573616-51573635 | None:intergenic | 55.0% | |
| ! | ATATCGGGTGTCACGTTGGG+AGG | + | chr4.2:51577115-51577134 | None:intergenic | 55.0% |
| ! | GAAGACGAGAGTGTGCCTTC+TGG | - | chr4.2:51576607-51576626 | MS.gene061297:intron | 55.0% |
| ! | GGGGTGCCTCCTGTAGTATT+AGG | - | chr4.2:51578683-51578702 | MS.gene061297:intron | 55.0% |
| !! | ATACTACAGGAGGCACCCCA+TGG | + | chr4.2:51578682-51578701 | None:intergenic | 55.0% |
| AAATCTGCCATGGCGCCGCA+TGG | - | chr4.2:51578603-51578622 | MS.gene061297:intron | 60.0% | |
| AGGCACCCCATGGTCCTACT+AGG | + | chr4.2:51578672-51578691 | None:intergenic | 60.0% | |
| CCAATGGGTGGGATGGCACA+TGG | - | chr4.2:51578575-51578594 | MS.gene061297:intron | 60.0% | |
| CCATGTGCCATCCCACCCAT+TGG | + | chr4.2:51578578-51578597 | None:intergenic | 60.0% | |
| CCCCATGGTCCTACTAGGCA+TGG | + | chr4.2:51578667-51578686 | None:intergenic | 60.0% | |
| GCACGAGTGGTGCTTGAGGA+TGG | + | chr4.2:51577289-51577308 | None:intergenic | 60.0% | |
| GCGTGCTCATGCTGATGCTC+AGG | - | chr4.2:51574502-51574521 | MS.gene061297:intron | 60.0% | |
| TGGGCGGACAGGCTTCAAAG+AGG | - | chr4.2:51578837-51578856 | MS.gene061297:intron | 60.0% | |
| ! | CACAGATGCTTTGGGCGGAC+AGG | - | chr4.2:51578826-51578845 | MS.gene061297:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 51573547 | 51578977 | 51573547 | ID=MS.gene061297 |
| chr4.2 | mRNA | 51573547 | 51578977 | 51573547 | ID=MS.gene061297.t1;Parent=MS.gene061297 |
| chr4.2 | exon | 51578882 | 51578977 | 51578882 | ID=MS.gene061297.t1.exon1;Parent=MS.gene061297.t1 |
| chr4.2 | CDS | 51578882 | 51578977 | 51578882 | ID=cds.MS.gene061297.t1;Parent=MS.gene061297.t1 |
| chr4.2 | exon | 51577959 | 51578189 | 51577959 | ID=MS.gene061297.t1.exon2;Parent=MS.gene061297.t1 |
| chr4.2 | CDS | 51577959 | 51578189 | 51577959 | ID=cds.MS.gene061297.t1;Parent=MS.gene061297.t1 |
| chr4.2 | exon | 51577342 | 51577398 | 51577342 | ID=MS.gene061297.t1.exon3;Parent=MS.gene061297.t1 |
| chr4.2 | CDS | 51577342 | 51577398 | 51577342 | ID=cds.MS.gene061297.t1;Parent=MS.gene061297.t1 |
| chr4.2 | exon | 51577087 | 51577215 | 51577087 | ID=MS.gene061297.t1.exon4;Parent=MS.gene061297.t1 |
| chr4.2 | CDS | 51577087 | 51577215 | 51577087 | ID=cds.MS.gene061297.t1;Parent=MS.gene061297.t1 |
| chr4.2 | exon | 51576703 | 51576780 | 51576703 | ID=MS.gene061297.t1.exon5;Parent=MS.gene061297.t1 |
| chr4.2 | CDS | 51576703 | 51576780 | 51576703 | ID=cds.MS.gene061297.t1;Parent=MS.gene061297.t1 |
| chr4.2 | exon | 51576538 | 51576608 | 51576538 | ID=MS.gene061297.t1.exon6;Parent=MS.gene061297.t1 |
| chr4.2 | CDS | 51576538 | 51576608 | 51576538 | ID=cds.MS.gene061297.t1;Parent=MS.gene061297.t1 |
| chr4.2 | exon | 51576064 | 51576113 | 51576064 | ID=MS.gene061297.t1.exon7;Parent=MS.gene061297.t1 |
| chr4.2 | CDS | 51576064 | 51576113 | 51576064 | ID=cds.MS.gene061297.t1;Parent=MS.gene061297.t1 |
| chr4.2 | exon | 51575745 | 51575943 | 51575745 | ID=MS.gene061297.t1.exon8;Parent=MS.gene061297.t1 |
| chr4.2 | CDS | 51575745 | 51575943 | 51575745 | ID=cds.MS.gene061297.t1;Parent=MS.gene061297.t1 |
| chr4.2 | exon | 51575083 | 51575641 | 51575083 | ID=MS.gene061297.t1.exon9;Parent=MS.gene061297.t1 |
| chr4.2 | CDS | 51575083 | 51575641 | 51575083 | ID=cds.MS.gene061297.t1;Parent=MS.gene061297.t1 |
| chr4.2 | exon | 51574229 | 51574372 | 51574229 | ID=MS.gene061297.t1.exon10;Parent=MS.gene061297.t1 |
| chr4.2 | CDS | 51574229 | 51574372 | 51574229 | ID=cds.MS.gene061297.t1;Parent=MS.gene061297.t1 |
| chr4.2 | exon | 51573547 | 51573693 | 51573547 | ID=MS.gene061297.t1.exon11;Parent=MS.gene061297.t1 |
| chr4.2 | CDS | 51573547 | 51573693 | 51573547 | ID=cds.MS.gene061297.t1;Parent=MS.gene061297.t1 |
| Gene Sequence |
| Protein sequence |
