Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06145.t1 | XP_003630858.1 | 97.5 | 395 | 10 | 0 | 1 | 395 | 1 | 395 | 3.00E-153 | 551.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06145.t1 | G7L9Q1 | 97.5 | 395 | 10 | 0 | 1 | 395 | 1 | 395 | 2.1e-153 | 551.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05843 | MS.gene06145 | 0.858717 | 6.80E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06145.t1 | MTR_8g104260 | 98.228 | 395 | 7 | 0 | 1 | 395 | 1 | 395 | 0.0 | 741 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06145.t1 | AT1G73840 | 47.932 | 411 | 175 | 16 | 1 | 395 | 1 | 388 | 1.41e-78 | 247 |
| MS.gene06145.t1 | AT1G73840 | 42.857 | 350 | 162 | 15 | 61 | 395 | 1 | 327 | 2.06e-43 | 154 |
Find 125 sgRNAs with CRISPR-Local
Find 346 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGCACTGAAGGCTGATTT+TGG | 0.217216 | 4.1:-2230290 | None:intergenic |
| CCACCGATTGGTGCCAATTT+AGG | 0.222463 | 4.1:+2230636 | MS.gene06145:CDS |
| GGAGCTATTGGTTGAACTTT+TGG | 0.239042 | 4.1:-2230138 | None:intergenic |
| GCACCATTCCAAGCATGATT+TGG | 0.249673 | 4.1:-2230019 | None:intergenic |
| AGCATGTTGAAAACCTAAAT+TGG | 0.303611 | 4.1:-2230649 | None:intergenic |
| GGTTTGCACTGAAGGTGGTC+TGG | 0.310505 | 4.1:-2230595 | None:intergenic |
| GGATCTGTTTGGCTTGTTGC+TGG | 0.311501 | 4.1:-2228176 | None:intergenic |
| GCACCTTGCACAGGCAATAT+TGG | 0.320522 | 4.1:-2230216 | None:intergenic |
| CTTTGGTTAACATGGGGTTT+TGG | 0.322191 | 4.1:-2228203 | None:intergenic |
| TGGGGAGTCAGATGCCCTTT+AGG | 0.329475 | 4.1:-2230390 | None:intergenic |
| CAGGTTGGAAATATACCATT+TGG | 0.354659 | 4.1:+2232100 | MS.gene06145:intron |
| CACCATTCCAAGCATGATTT+GGG | 0.357594 | 4.1:-2230018 | None:intergenic |
| ATCATCTCAGTCATCTTATC+AGG | 0.369211 | 4.1:+2230859 | MS.gene06145:CDS |
| AAGTTGATTCTTCGACATTC+CGG | 0.379339 | 4.1:-2228029 | None:intergenic |
| GAGAATCTAGCACAGCATTC+TGG | 0.381170 | 4.1:+2232196 | MS.gene06145:CDS |
| GGTCTTTGTGTCGGCTGTAC+TGG | 0.384854 | 4.1:-2230177 | None:intergenic |
| AAATTGATAGAGGGTCTTCT+TGG | 0.393175 | 4.1:+2232158 | MS.gene06145:CDS |
| AGCACTTGATTTCTTTGTTC+CGG | 0.406131 | 4.1:-2232441 | None:intergenic |
| TCCTCAGGGACCATCATCTA+TGG | 0.406393 | 4.1:+2232219 | MS.gene06145:CDS |
| GTTTGCACTGAAGGTGGTCT+GGG | 0.415268 | 4.1:-2230594 | None:intergenic |
| TTCTTGGATGCCTGGTCCCT+CGG | 0.417764 | 4.1:+2232174 | MS.gene06145:CDS |
| AGCACAGCATTCTGGTCCTC+AGG | 0.420622 | 4.1:+2232204 | MS.gene06145:CDS |
| AATGCCAACTGCCTCGAGTC+AGG | 0.424620 | 4.1:+2230506 | MS.gene06145:CDS |
| AGAGGGTCTTCTTGGATGCC+TGG | 0.426008 | 4.1:+2232166 | MS.gene06145:CDS |
| GGAACAGCAGCATATGAAAC+TGG | 0.426563 | 4.1:-2230309 | None:intergenic |
| GGTCTGGGCTGCGGTGGCAA+TGG | 0.431160 | 4.1:-2230579 | None:intergenic |
| AGCAATGCCTTCTCCATGTC+TGG | 0.434431 | 4.1:-2232372 | None:intergenic |
| AGAAACCTGGAAAAGTGCTT+TGG | 0.437758 | 4.1:-2228220 | None:intergenic |
| TGAGATTGATGACTCGTTGT+AGG | 0.439418 | 4.1:-2230330 | None:intergenic |
| TATTTGGCTTACATGAAAGA+TGG | 0.445107 | 4.1:-2230700 | None:intergenic |
| AAATGCCACAACAGCCTAAA+GGG | 0.450959 | 4.1:+2230376 | MS.gene06145:CDS |
| TACACCTGCTTGATCTTGTA+TGG | 0.452744 | 4.1:-2230238 | None:intergenic |
| GGATGGAAGGTTTGCACTGA+AGG | 0.452928 | 4.1:-2230603 | None:intergenic |
| AACAGATGCTGGAGCTACTT+GGG | 0.459345 | 4.1:-2230409 | None:intergenic |
| AGGTTGGAAATATACCATTT+GGG | 0.465872 | 4.1:+2232101 | MS.gene06145:intron |
| GAACAGATGCTGGAGCTACT+TGG | 0.467900 | 4.1:-2230410 | None:intergenic |
| GAGGCAGTTGGCATTTGAGT+TGG | 0.469452 | 4.1:-2230498 | None:intergenic |
| CGAGGGTTTATCAGCGAACC+TGG | 0.474127 | 4.1:+2228006 | MS.gene06145:CDS |
| CATCAACCATTGCAGACTCC+TGG | 0.476133 | 4.1:+2230531 | MS.gene06145:CDS |
| CTGGGCTGCGGTGGCAATGG+TGG | 0.483339 | 4.1:-2230576 | None:intergenic |
| AACGAGGTCTTCGCAATGGC+CGG | 0.494684 | 4.1:+2227968 | None:intergenic |
| ACTGAAGGTGGTCTGGGCTG+CGG | 0.496060 | 4.1:-2230588 | None:intergenic |
| TCTTGTATGGCACCTTGCAC+AGG | 0.500095 | 4.1:-2230225 | None:intergenic |
| GTAGTAGTGCCTGCCCTGGT+GGG | 0.503872 | 4.1:-2230826 | None:intergenic |
| CAAATGCCACAACAGCCTAA+AGG | 0.507130 | 4.1:+2230375 | MS.gene06145:CDS |
| AATGCAATGCAAATTGATAG+AGG | 0.513025 | 4.1:+2232148 | MS.gene06145:CDS |
| GACTGAGATGATTGTTGACT+TGG | 0.515162 | 4.1:-2230848 | None:intergenic |
| TCTGATTTCAGCAGTCAAGC+TGG | 0.516591 | 4.1:+2232124 | MS.gene06145:CDS |
| GCTAGATTCTCCGAGGGACC+AGG | 0.516688 | 4.1:-2232184 | None:intergenic |
| ACAGAGGGTGGAGGTATATG+TGG | 0.520018 | 4.1:-2230450 | None:intergenic |
| CGATATAATGTCTCAGATGA+AGG | 0.521213 | 4.1:+2228054 | MS.gene06145:CDS |
| ATTTGGCTTACATGAAAGAT+GGG | 0.523822 | 4.1:-2230699 | None:intergenic |
| GATGATTGTGGAACAGATGC+TGG | 0.524572 | 4.1:-2230420 | None:intergenic |
| ATTGGAGCAGGCTGAACACT+TGG | 0.524643 | 4.1:-2230198 | None:intergenic |
| AGATGCCCTTTAGGCTGTTG+TGG | 0.524650 | 4.1:-2230381 | None:intergenic |
| GGCATTTGAGTTGGATGAAG+TGG | 0.526366 | 4.1:-2230489 | None:intergenic |
| CCTAAATTGGCACCAATCGG+TGG | 0.528144 | 4.1:-2230636 | None:intergenic |
| AAACCTAAATTGGCACCAAT+CGG | 0.529814 | 4.1:-2230639 | None:intergenic |
| CTTGGTAGTAGTGCCTGCCC+TGG | 0.530835 | 4.1:-2230830 | None:intergenic |
| TGCACAGGCAATATTGGAGC+AGG | 0.531217 | 4.1:-2230210 | None:intergenic |
| GGTAGTAGTGCCTGCCCTGG+TGG | 0.531403 | 4.1:-2230827 | None:intergenic |
| GTTGGATCTACGTTCCCACC+AGG | 0.534207 | 4.1:+2230812 | MS.gene06145:CDS |
| AATCAGGCCCAAATCATGCT+TGG | 0.534517 | 4.1:+2230011 | MS.gene06145:intron |
| GGTAGGAGATTTATCTGCTC+CGG | 0.535490 | 4.1:-2232417 | None:intergenic |
| GAAAAGTGCTTTGGTTAACA+TGG | 0.539131 | 4.1:-2228211 | None:intergenic |
| GCTCCAATATTGCCTGTGCA+AGG | 0.539567 | 4.1:+2230213 | MS.gene06145:CDS |
| CTCAAACTCAAATTCCTCCC+AGG | 0.544437 | 4.1:+2230262 | MS.gene06145:CDS |
| GGTTTATCAGCGAACCTGGC+CGG | 0.544748 | 4.1:+2228010 | MS.gene06145:CDS |
| ATCTACGTTCCCACCAGGGC+AGG | 0.545822 | 4.1:+2230817 | MS.gene06145:CDS |
| GATTTCTTTGTTCCGGAGGT+AGG | 0.546980 | 4.1:-2232434 | None:intergenic |
| GCATATGAAACTGGCACTGA+AGG | 0.547468 | 4.1:-2230300 | None:intergenic |
| GGAGAAGGCATTGCTTCAGC+AGG | 0.548457 | 4.1:+2232380 | MS.gene06145:CDS |
| TTGCAACGAATGTGCAGCTG+TGG | 0.549837 | 4.1:-2230355 | None:intergenic |
| GAAGGTGGTCTGGGCTGCGG+TGG | 0.560378 | 4.1:-2230585 | None:intergenic |
| GCAGATAAATCTCCTACCTC+CGG | 0.560675 | 4.1:+2232422 | MS.gene06145:CDS |
| CATGAAAGATGGGCGGAGGA+AGG | 0.566167 | 4.1:-2230689 | None:intergenic |
| AAAAGTGCTTTGGTTAACAT+GGG | 0.566181 | 4.1:-2228210 | None:intergenic |
| ATAATTACCGCAGGAGGCCG+AGG | 0.566844 | 4.1:-2232274 | None:intergenic |
| CTAAATTGGCACCAATCGGT+GGG | 0.568515 | 4.1:-2230635 | None:intergenic |
| CATGCAGTTGACACCAGACA+TGG | 0.573544 | 4.1:+2232359 | MS.gene06145:intron |
| GATGAATGAACAGAGGGTGG+AGG | 0.579071 | 4.1:-2230459 | None:intergenic |
| GGTGCAAAACCTCCTAGTGT+TGG | 0.579641 | 4.1:+2230794 | MS.gene06145:CDS |
| TGAGCAGAAACCATAGATGA+TGG | 0.580733 | 4.1:-2232229 | None:intergenic |
| TGCGCCTGACTCGAGGCAGT+TGG | 0.581868 | 4.1:-2230510 | None:intergenic |
| GATTCTTCGACATTCCGGCC+AGG | 0.582129 | 4.1:-2228024 | None:intergenic |
| GGCCCAAATCATGCTTGGAA+TGG | 0.582279 | 4.1:+2230016 | MS.gene06145:intron |
| GTGCTGCTAATCAGCCTCCT+CGG | 0.587990 | 4.1:+2232257 | MS.gene06145:CDS |
| TCTATGGTTTCTGCTCAGAT+CGG | 0.590710 | 4.1:+2232235 | MS.gene06145:CDS |
| TGGAAGGTTTGCACTGAAGG+TGG | 0.591348 | 4.1:-2230600 | None:intergenic |
| TGTGGAAGTTGTGATGATTG+TGG | 0.596173 | 4.1:-2230432 | None:intergenic |
| GGAAAACAAGTAAGCGGCGA+GGG | 0.599552 | 4.1:+2227989 | MS.gene06145:CDS |
| TGAACACTTGGTCTTTGTGT+CGG | 0.602044 | 4.1:-2230186 | None:intergenic |
| TCAGCCTCCTCGGCCTCCTG+CGG | 0.602819 | 4.1:+2232267 | MS.gene06145:CDS |
| CTGCTGAAATCAGACCCAAA+TGG | 0.603135 | 4.1:-2232115 | None:intergenic |
| GCACAGCATTCTGGTCCTCA+GGG | 0.603604 | 4.1:+2232205 | MS.gene06145:CDS |
| AGAGGCATATGTGAAAATCC+AGG | 0.603771 | 4.1:-2230549 | None:intergenic |
| AAATTGGCACCAATCGGTGG+GGG | 0.604689 | 4.1:-2230633 | None:intergenic |
| TAAATTGGCACCAATCGGTG+GGG | 0.616828 | 4.1:-2230634 | None:intergenic |
| ATGCAATGCAAATTGATAGA+GGG | 0.619745 | 4.1:+2232149 | MS.gene06145:CDS |
| TGGTTGATGCGCCTGACTCG+AGG | 0.620870 | 4.1:-2230517 | None:intergenic |
| CTTACATGAAAGATGGGCGG+AGG | 0.620985 | 4.1:-2230693 | None:intergenic |
| ACAGATGCTGGAGCTACTTG+GGG | 0.629033 | 4.1:-2230408 | None:intergenic |
| TTCACAATAATTACCGCAGG+AGG | 0.629072 | 4.1:-2232280 | None:intergenic |
| ACTTGATTTCTTTGTTCCGG+AGG | 0.637553 | 4.1:-2232438 | None:intergenic |
| GGTGGCAATGGTGGTTGCAG+AGG | 0.638987 | 4.1:-2230567 | None:intergenic |
| AAAGTGCTTTGGTTAACATG+GGG | 0.639464 | 4.1:-2228209 | None:intergenic |
| AACGTAGATCCAACACTAGG+AGG | 0.646821 | 4.1:-2230803 | None:intergenic |
| GGTGCCATACAAGATCAAGC+AGG | 0.649035 | 4.1:+2230234 | MS.gene06145:CDS |
| TGCAACGAATGTGCAGCTGT+GGG | 0.650445 | 4.1:-2230354 | None:intergenic |
| TGCTGTGCTAGATTCTCCGA+GGG | 0.654352 | 4.1:-2232190 | None:intergenic |
| ATTACCGCAGGAGGCCGAGG+AGG | 0.656048 | 4.1:-2232271 | None:intergenic |
| TGGCTTACATGAAAGATGGG+CGG | 0.666783 | 4.1:-2230696 | None:intergenic |
| GAAGATGAATGAACAGAGGG+TGG | 0.672837 | 4.1:-2230462 | None:intergenic |
| GGGAACGTAGATCCAACACT+AGG | 0.673989 | 4.1:-2230806 | None:intergenic |
| TTGGATCTACGTTCCCACCA+GGG | 0.674955 | 4.1:+2230813 | MS.gene06145:CDS |
| ATGGCCGGAAAACAAGTAAG+CGG | 0.675868 | 4.1:+2227983 | MS.gene06145:CDS |
| TGTGAAGATGAATGAACAGA+GGG | 0.681536 | 4.1:-2230465 | None:intergenic |
| AATGGTGCAGTCGCAACAAG+CGG | 0.683239 | 4.1:+2230034 | MS.gene06145:CDS |
| CGGAAAACAAGTAAGCGGCG+AGG | 0.688386 | 4.1:+2227988 | MS.gene06145:CDS |
| GTTGACACCAGACATGGAGA+AGG | 0.688888 | 4.1:+2232365 | MS.gene06145:intron |
| ATGCTGTGCTAGATTCTCCG+AGG | 0.691552 | 4.1:-2232191 | None:intergenic |
| GAAAATCCAGGAGTCTGCAA+TGG | 0.697860 | 4.1:-2230537 | None:intergenic |
| GCAGGTCATGAGTCTCACAC+CGG | 0.699959 | 4.1:+2232398 | MS.gene06145:CDS |
| ACCATAGATGATGGTCCCTG+AGG | 0.710726 | 4.1:-2232220 | None:intergenic |
| CTGTGAAGATGAATGAACAG+AGG | 0.739097 | 4.1:-2230466 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTTAATATTTCACAA+TGG | + | chr4.1:2228618-2228637 | MS.gene06145:intron | 10.0% |
| !! | AAATTGTAAACTGAAATATT+TGG | - | chr4.1:2230719-2230738 | None:intergenic | 15.0% |
| !! | TATACAAACAAAATTATCTT+TGG | + | chr4.1:2231121-2231140 | MS.gene06145:intron | 15.0% |
| !!! | AAATATTAAATTTTTCAAGC+AGG | - | chr4.1:2228613-2228632 | None:intergenic | 15.0% |
| !!! | AAATATTTTTGTTTTTGCAA+AGG | - | chr4.1:2229310-2229329 | None:intergenic | 15.0% |
| !!! | AATATTAAATTTTTCAAGCA+GGG | - | chr4.1:2228612-2228631 | None:intergenic | 15.0% |
| !!! | TATTTATTGATGAAATTTTC+AGG | + | chr4.1:2230769-2230788 | MS.gene06145:intron | 15.0% |
| !!! | TTAATTTCTAGATACAAAAT+CGG | - | chr4.1:2228378-2228397 | None:intergenic | 15.0% |
| !!! | TTCAATATATATTTTTGACA+TGG | - | chr4.1:2231349-2231368 | None:intergenic | 15.0% |
| !! | AAACAGTCTAAAAAAATGAA+CGG | - | chr4.1:2229870-2229889 | None:intergenic | 20.0% |
| !! | ACAAGTAAATCTAAGTAAAA+TGG | + | chr4.1:2232003-2232022 | MS.gene06145:intron | 20.0% |
| !! | ATTTAATATTTCACAATGGA+TGG | + | chr4.1:2228622-2228641 | MS.gene06145:intron | 20.0% |
| !! | TTAATGATAAAAAATCGATC+TGG | - | chr4.1:2228839-2228858 | None:intergenic | 20.0% |
| !!! | AAAATTATCTTTGGTTTACA+TGG | + | chr4.1:2231130-2231149 | MS.gene06145:intron | 20.0% |
| !!! | AAGTTAGATTTTACTTTAGA+CGG | + | chr4.1:2229421-2229440 | MS.gene06145:intron | 20.0% |
| !!! | TAATGTTTCTATCTATTTCA+CGG | + | chr4.1:2229369-2229388 | MS.gene06145:intron | 20.0% |
| !!! | TTTTGTCAATATGAAGATTA+CGG | + | chr4.1:2231766-2231785 | MS.gene06145:intron | 20.0% |
| ! | AAAGTAAAATCTAACTTCAG+AGG | - | chr4.1:2229418-2229437 | None:intergenic | 25.0% |
| ! | AAGTAAAATCTAACTTCAGA+GGG | - | chr4.1:2229417-2229436 | None:intergenic | 25.0% |
| ! | AGATTTAGAGATTAATGAGT+TGG | + | chr4.1:2228495-2228514 | MS.gene06145:intron | 25.0% |
| ! | ATATTGATGGAAGTTTGATT+GGG | + | chr4.1:2229095-2229114 | MS.gene06145:intron | 25.0% |
| ! | ATTTCTGTCAAACAAAAAGA+AGG | + | chr4.1:2231680-2231699 | MS.gene06145:intron | 25.0% |
| ! | CAACTCAAGATAAAAAACTA+TGG | - | chr4.1:2231191-2231210 | None:intergenic | 25.0% |
| ! | CTAGAAATACATAAGAGAAA+CGG | + | chr4.1:2228465-2228484 | MS.gene06145:intron | 25.0% |
| ! | GTAGTCTATGTATAACATTT+AGG | + | chr4.1:2229018-2229037 | MS.gene06145:intron | 25.0% |
| ! | GTGAAATAGATAGAAACATT+AGG | - | chr4.1:2229370-2229389 | None:intergenic | 25.0% |
| ! | GTGGCATCAAAATATATTAT+TGG | + | chr4.1:2230951-2230970 | MS.gene06145:intron | 25.0% |
| ! | TAGATTTGCATGCTAATAAA+TGG | + | chr4.1:2230102-2230121 | MS.gene06145:intron | 25.0% |
| ! | TATATTGATGGAAGTTTGAT+TGG | + | chr4.1:2229094-2229113 | MS.gene06145:intron | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | + | chr4.1:2228527-2228546 | MS.gene06145:intron | 25.0% |
| ! | TTTAGACTTGAAAACTATGT+TGG | + | chr4.1:2230904-2230923 | MS.gene06145:intron | 25.0% |
| ! | TTTGTCAATATGAAGATTAC+GGG | + | chr4.1:2231767-2231786 | MS.gene06145:intron | 25.0% |
| !! | AAAGCATACAGATTTGAAAT+CGG | - | chr4.1:2229623-2229642 | None:intergenic | 25.0% |
| !! | CTGTTTGTAGTCTTTAATTT+GGG | - | chr4.1:2231427-2231446 | None:intergenic | 25.0% |
| !! | TAATGAGTTGGATCTAAATA+TGG | + | chr4.1:2228507-2228526 | MS.gene06145:intron | 25.0% |
| !! | TCTGTTTTGTATCTATATGT+CGG | + | chr4.1:2228332-2228351 | MS.gene06145:intron | 25.0% |
| !! | TGTAGATTGTGTTATGTTTT+GGG | + | chr4.1:2229128-2229147 | MS.gene06145:intron | 25.0% |
| !! | TTGTAGATTGTGTTATGTTT+TGG | + | chr4.1:2229127-2229146 | MS.gene06145:intron | 25.0% |
| !!! | ATGTATAACATTTAGGTTGA+GGG | + | chr4.1:2229025-2229044 | MS.gene06145:intron | 25.0% |
| !!! | CTACACATGAAGATTTTTTT+AGG | + | chr4.1:2229333-2229352 | MS.gene06145:intron | 25.0% |
| !!! | TATGTATAACATTTAGGTTG+AGG | + | chr4.1:2229024-2229043 | MS.gene06145:intron | 25.0% |
| !!! | TGTTTGTAGTCTTTAATTTG+GGG | - | chr4.1:2231426-2231445 | None:intergenic | 25.0% |
| !!! | TTATAGCTTTGGAGTTTTAA+GGG | + | chr4.1:2228697-2228716 | MS.gene06145:intron | 25.0% |
| !!! | TTTTTTATCATTAATGAGCG+AGG | + | chr4.1:2228845-2228864 | MS.gene06145:intron | 25.0% |
| AATGACAGCAAAATAAAGAG+AGG | - | chr4.1:2230066-2230085 | None:intergenic | 30.0% | |
| AATGCAATGCAAATTGATAG+AGG | + | chr4.1:2232148-2232167 | MS.gene06145:CDS | 30.0% | |
| AGCATGTTGAAAACCTAAAT+TGG | - | chr4.1:2230652-2230671 | None:intergenic | 30.0% | |
| AGGTTGGAAATATACCATTT+GGG | + | chr4.1:2232101-2232120 | MS.gene06145:intron | 30.0% | |
| ATAGTTTCTGTTGTAGGATT+AGG | + | chr4.1:2228797-2228816 | MS.gene06145:intron | 30.0% | |
| ATGCAATGCAAATTGATAGA+GGG | + | chr4.1:2232149-2232168 | MS.gene06145:CDS | 30.0% | |
| CAAAAAGAAGGTAAATCACA+AGG | + | chr4.1:2231692-2231711 | MS.gene06145:intron | 30.0% | |
| CATTTCACAGTGAATCTAAA+AGG | - | chr4.1:2231162-2231181 | None:intergenic | 30.0% | |
| CCTGATTAGACAAAACAAAA+TGG | - | chr4.1:2229998-2230017 | None:intergenic | 30.0% | |
| CGTTTCTCTTATGTATTTCT+AGG | - | chr4.1:2228467-2228486 | None:intergenic | 30.0% | |
| CTGAATAGAGAAAAACGAAA+GGG | - | chr4.1:2228139-2228158 | None:intergenic | 30.0% | |
| GATAGAAACATTAGGAAATG+AGG | - | chr4.1:2229362-2229381 | None:intergenic | 30.0% | |
| GCATACACATGTATAAAGAA+TGG | - | chr4.1:2229491-2229510 | None:intergenic | 30.0% | |
| GCTGTTTGTAGTCTTTAATT+TGG | - | chr4.1:2231428-2231447 | None:intergenic | 30.0% | |
| GTAACGAGGTAATATATTGA+TGG | + | chr4.1:2229082-2229101 | MS.gene06145:intron | 30.0% | |
| GTTGTATCGTTGTTATAGTT+TGG | + | chr4.1:2228290-2228309 | MS.gene06145:intron | 30.0% | |
| TAATTCACAATAATTACCGC+AGG | - | chr4.1:2232286-2232305 | None:intergenic | 30.0% | |
| TAGACAGTGGAAAAGAAAAA+TGG | + | chr4.1:2231511-2231530 | MS.gene06145:intron | 30.0% | |
| TATTTCGCAATTGAGTTAGT+CGG | + | chr4.1:2231903-2231922 | MS.gene06145:intron | 30.0% | |
| TCTGAATAGAGAAAAACGAA+AGG | - | chr4.1:2228140-2228159 | None:intergenic | 30.0% | |
| TGTTTAATTAACTAGCATGC+TGG | + | chr4.1:2231929-2231948 | MS.gene06145:intron | 30.0% | |
| TTATTCCGAAAATGCTATAG+TGG | + | chr4.1:2231225-2231244 | MS.gene06145:intron | 30.0% | |
| ! | AAGGGATTTTTGTGATTCTT+CGG | + | chr4.1:2228715-2228734 | MS.gene06145:intron | 30.0% |
| ! | ATAGTGGAATGACAGATAAT+TGG | + | chr4.1:2231241-2231260 | MS.gene06145:intron | 30.0% |
| ! | ATTTGGCTTACATGAAAGAT+GGG | - | chr4.1:2230702-2230721 | None:intergenic | 30.0% |
| ! | TATTGTACTGATGATTCTGA+AGG | + | chr4.1:2231804-2231823 | MS.gene06145:intron | 30.0% |
| ! | TATTTGGCTTACATGAAAGA+TGG | - | chr4.1:2230703-2230722 | None:intergenic | 30.0% |
| ! | TCATTCCACTATAGCATTTT+CGG | - | chr4.1:2231233-2231252 | None:intergenic | 30.0% |
| !! | AAAAGTGCTTTGGTTAACAT+GGG | - | chr4.1:2228213-2228232 | None:intergenic | 30.0% |
| !! | AATTTAGGTTTTCAACATGC+TGG | + | chr4.1:2230651-2230670 | MS.gene06145:CDS | 30.0% |
| !! | GTAAATCCACTAGCTTATTT+TGG | + | chr4.1:2228644-2228663 | MS.gene06145:intron | 30.0% |
| !! | TATTGATGAAATTTTCAGGC+TGG | + | chr4.1:2230773-2230792 | MS.gene06145:intron | 30.0% |
| !! | TGTATAACATTTAGGTTGAG+GGG | + | chr4.1:2229026-2229045 | MS.gene06145:intron | 30.0% |
| !! | TGTGATTGCTTTATTTCTGA+TGG | - | chr4.1:2231640-2231659 | None:intergenic | 30.0% |
| !!! | CCATTTTGTTTTGTCTAATC+AGG | + | chr4.1:2229995-2230014 | MS.gene06145:intron | 30.0% |
| !!! | GTTATAGCTTTGGAGTTTTA+AGG | + | chr4.1:2228696-2228715 | MS.gene06145:intron | 30.0% |
| !!! | TAGCTTATTTTGGAACCATA+GGG | + | chr4.1:2228654-2228673 | MS.gene06145:intron | 30.0% |
| AAACCTAAATTGGCACCAAT+CGG | - | chr4.1:2230642-2230661 | None:intergenic | 35.0% | |
| AAACCTTGGTCTCAATTCTT+TGG | - | chr4.1:2231538-2231557 | None:intergenic | 35.0% | |
| AAAGTGTGCAATTCACTTTG+GGG | - | chr4.1:2229562-2229581 | None:intergenic | 35.0% | |
| AAATTGATAGAGGGTCTTCT+TGG | + | chr4.1:2232158-2232177 | MS.gene06145:CDS | 35.0% | |
| AAGTGTGCAATTCACTTTAG+GGG | - | chr4.1:2229727-2229746 | None:intergenic | 35.0% | |
| ACCAAAATCAACTTGGATTG+AGG | - | chr4.1:2231962-2231981 | None:intergenic | 35.0% | |
| ACTCTTCTTACTACACACTA+CGG | - | chr4.1:2228401-2228420 | None:intergenic | 35.0% | |
| AGCAAGCAGAGAATATCAAT+AGG | - | chr4.1:2232337-2232356 | None:intergenic | 35.0% | |
| AGCACTTGATTTCTTTGTTC+CGG | - | chr4.1:2232444-2232463 | None:intergenic | 35.0% | |
| AGCATGCAAATCTATACCAA+AGG | - | chr4.1:2230096-2230115 | None:intergenic | 35.0% | |
| AGGTTGAAACCAATTAACAC+CGG | + | chr4.1:2231824-2231843 | MS.gene06145:intron | 35.0% | |
| AGTAAGAAGAGTAGATCAGA+TGG | + | chr4.1:2228409-2228428 | MS.gene06145:intron | 35.0% | |
| AGTTGCATAGATCAGAAATG+GGG | + | chr4.1:2231732-2231751 | MS.gene06145:intron | 35.0% | |
| ATATAGATGTTGCTGAGCTA+AGG | + | chr4.1:2228948-2228967 | MS.gene06145:intron | 35.0% | |
| ATATGATCCAAAGTAAGCAC+AGG | - | chr4.1:2228892-2228911 | None:intergenic | 35.0% | |
| ATCAGAAATGGGGTAAAGAT+GGG | + | chr4.1:2231742-2231761 | MS.gene06145:intron | 35.0% | |
| ATCATCTCAGTCATCTTATC+AGG | + | chr4.1:2230859-2230878 | MS.gene06145:CDS | 35.0% | |
| ATGGTTCCAAAATAAGCTAG+TGG | - | chr4.1:2228653-2228672 | None:intergenic | 35.0% | |
| CAAAGTGTGCAATTCACTTT+GGG | - | chr4.1:2229563-2229582 | None:intergenic | 35.0% | |
| CATGAATCCAAAACTCATGA+TGG | - | chr4.1:2230984-2231003 | None:intergenic | 35.0% | |
| CGATATAATGTCTCAGATGA+AGG | + | chr4.1:2228054-2228073 | MS.gene06145:CDS | 35.0% | |
| CTAAAGTGAATTGCACACTT+CGG | + | chr4.1:2229727-2229746 | MS.gene06145:intron | 35.0% | |
| GAAAACTATGTTGGTACCAT+GGG | + | chr4.1:2230913-2230932 | MS.gene06145:intron | 35.0% | |
| GAAGTGTGCAATTCACTTTA+GGG | - | chr4.1:2229728-2229747 | None:intergenic | 35.0% | |
| GAGGATAGTCAAATTACAAG+AGG | + | chr4.1:2228431-2228450 | MS.gene06145:intron | 35.0% | |
| GAGTTGCATAGATCAGAAAT+GGG | + | chr4.1:2231731-2231750 | MS.gene06145:intron | 35.0% | |
| GATTCTGCTGCAGAAAAAAT+AGG | - | chr4.1:2231027-2231046 | None:intergenic | 35.0% | |
| GCTAATAAATGGTTGCTTCT+AGG | + | chr4.1:2230113-2230132 | MS.gene06145:intron | 35.0% | |
| GTTAGCAATAGCAATAAGGA+GGG | - | chr4.1:2228117-2228136 | None:intergenic | 35.0% | |
| TCATCAGTACAATATGACAG+CGG | - | chr4.1:2231798-2231817 | None:intergenic | 35.0% | |
| TCATTTAGTGGGATAAGACT+TGG | + | chr4.1:2229208-2229227 | MS.gene06145:intron | 35.0% | |
| TCGTTACTGCATAATATTGC+AGG | - | chr4.1:2229069-2229088 | None:intergenic | 35.0% | |
| TGAAAACTATGTTGGTACCA+TGG | + | chr4.1:2230912-2230931 | MS.gene06145:intron | 35.0% | |
| TGAGTTGCATAGATCAGAAA+TGG | + | chr4.1:2231730-2231749 | MS.gene06145:intron | 35.0% | |
| TGCAATATTATGCAGTAACG+AGG | + | chr4.1:2229068-2229087 | MS.gene06145:intron | 35.0% | |
| TGCTGCAGAAAAAATAGGAT+TGG | - | chr4.1:2231022-2231041 | None:intergenic | 35.0% | |
| TGTGAAGATGAATGAACAGA+GGG | - | chr4.1:2230468-2230487 | None:intergenic | 35.0% | |
| ! | AAAGTGCTTTGGTTAACATG+GGG | - | chr4.1:2228212-2228231 | None:intergenic | 35.0% |
| ! | AAGGGTTAGCAATAGCAATA+AGG | - | chr4.1:2228121-2228140 | None:intergenic | 35.0% |
| ! | AAGTCTTATCCCACTAAATG+AGG | - | chr4.1:2229209-2229228 | None:intergenic | 35.0% |
| ! | AAGTTGATTCTTCGACATTC+CGG | - | chr4.1:2228032-2228051 | None:intergenic | 35.0% |
| ! | ATTTTTGTGATTCTTCGGTG+CGG | + | chr4.1:2228720-2228739 | MS.gene06145:intron | 35.0% |
| ! | CAGGTTGGAAATATACCATT+TGG | + | chr4.1:2232100-2232119 | MS.gene06145:intron | 35.0% |
| ! | CTTTACACCATCATGAGTTT+TGG | + | chr4.1:2230974-2230993 | MS.gene06145:intron | 35.0% |
| ! | GGAGTCGTTTGAGTTATATA+AGG | + | chr4.1:2229591-2229610 | MS.gene06145:intron | 35.0% |
| ! | GTATATTTTTCTCCTCCTTC+CGG | - | chr4.1:2231846-2231865 | None:intergenic | 35.0% |
| ! | TAAGCCTTATCTCACTAAGT+GGG | - | chr4.1:2228577-2228596 | None:intergenic | 35.0% |
| ! | TCTGAAGTGTCACTACTATT+AGG | - | chr4.1:2231070-2231089 | None:intergenic | 35.0% |
| ! | TGACACAAAAAGCATGACTT+CGG | - | chr4.1:2232082-2232101 | None:intergenic | 35.0% |
| !! | AAAAAGGTGTTGCTAGAAAG+GGG | + | chr4.1:2228990-2229009 | MS.gene06145:intron | 35.0% |
| !! | AGATTGTGTTATGTTTTGGG+TGG | + | chr4.1:2229131-2229150 | MS.gene06145:intron | 35.0% |
| !! | CAAAAAGGTGTTGCTAGAAA+GGG | + | chr4.1:2228989-2229008 | MS.gene06145:intron | 35.0% |
| !! | GAAAAGTGCTTTGGTTAACA+TGG | - | chr4.1:2228214-2228233 | None:intergenic | 35.0% |
| !! | GAGTCGTTTGAGTTGTATAA+GGG | + | chr4.1:2229758-2229777 | MS.gene06145:intron | 35.0% |
| !! | GATTGTGTTATGTTTTGGGT+GGG | + | chr4.1:2229132-2229151 | MS.gene06145:intron | 35.0% |
| !!! | ACCTCAATCCAAGTTGATTT+TGG | + | chr4.1:2231958-2231977 | MS.gene06145:intron | 35.0% |
| !!! | CTAGCTTATTTTGGAACCAT+AGG | + | chr4.1:2228653-2228672 | MS.gene06145:intron | 35.0% |
| !!! | TGATTGTTTTGAGGAGCTAT+TGG | - | chr4.1:2230153-2230172 | None:intergenic | 35.0% |
| AAATGCCACAACAGCCTAAA+GGG | + | chr4.1:2230376-2230395 | MS.gene06145:CDS | 40.0% | |
| AAGAAGAGTAGATCAGATGG+AGG | + | chr4.1:2228412-2228431 | MS.gene06145:intron | 40.0% | |
| AAGTGTGCAATTCACTTTGG+GGG | - | chr4.1:2229561-2229580 | None:intergenic | 40.0% | |
| ACTTGATTTCTTTGTTCCGG+AGG | - | chr4.1:2232441-2232460 | None:intergenic | 40.0% | |
| AGAGAATATCAATAGGCTGC+AGG | - | chr4.1:2232330-2232349 | None:intergenic | 40.0% | |
| AGTGTGCAATTCACTTTAGG+GGG | - | chr4.1:2229726-2229745 | None:intergenic | 40.0% | |
| CACCATTCCAAGCATGATTT+GGG | - | chr4.1:2230021-2230040 | None:intergenic | 40.0% | |
| CCAAAGTGAATTGCACACTT+TGG | + | chr4.1:2229561-2229580 | MS.gene06145:intron | 40.0% | |
| CCAAAGTGTGCAATTCACTT+TGG | - | chr4.1:2229564-2229583 | None:intergenic | 40.0% | |
| CGAAGTGTGCAATTCACTTT+AGG | - | chr4.1:2229729-2229748 | None:intergenic | 40.0% | |
| CTGTGAAGATGAATGAACAG+AGG | - | chr4.1:2230469-2230488 | None:intergenic | 40.0% | |
| CTTATCCCACTAAATGAGGT+CGG | - | chr4.1:2229205-2229224 | None:intergenic | 40.0% | |
| GATCAGAAATGGGGTAAAGA+TGG | + | chr4.1:2231741-2231760 | MS.gene06145:intron | 40.0% | |
| GCAGCAATGACAAATTTGTC+AGG | - | chr4.1:2231878-2231897 | None:intergenic | 40.0% | |
| GCATATTTCGCTGACAACTA+CGG | - | chr4.1:2231602-2231621 | None:intergenic | 40.0% | |
| GGTTAGCAATAGCAATAAGG+AGG | - | chr4.1:2228118-2228137 | None:intergenic | 40.0% | |
| GTATGTTGTGCTACAACTGT+TGG | + | chr4.1:2230881-2230900 | MS.gene06145:intron | 40.0% | |
| TACACCTGCTTGATCTTGTA+TGG | - | chr4.1:2230241-2230260 | None:intergenic | 40.0% | |
| TAGTTGTCAGCGAAATATGC+AGG | + | chr4.1:2231602-2231621 | MS.gene06145:intron | 40.0% | |
| TCACACATCACAACAAACCT+TGG | - | chr4.1:2231552-2231571 | None:intergenic | 40.0% | |
| TCTATGGTTTCTGCTCAGAT+CGG | + | chr4.1:2232235-2232254 | MS.gene06145:CDS | 40.0% | |
| TGAAACCAATTAACACCGGA+AGG | + | chr4.1:2231828-2231847 | MS.gene06145:intron | 40.0% | |
| TGAGCAGAAACCATAGATGA+TGG | - | chr4.1:2232232-2232251 | None:intergenic | 40.0% | |
| TGCAAGGTATGGTTGCAAAA+AGG | + | chr4.1:2228974-2228993 | MS.gene06145:intron | 40.0% | |
| TGTAGGATTAGGAGACATCT+TGG | + | chr4.1:2228808-2228827 | MS.gene06145:intron | 40.0% | |
| TGTGGAAGTTGTGATGATTG+TGG | - | chr4.1:2230435-2230454 | None:intergenic | 40.0% | |
| TTATCATTAATGAGCGAGGC+AGG | + | chr4.1:2228849-2228868 | MS.gene06145:intron | 40.0% | |
| TTCACAATAATTACCGCAGG+AGG | - | chr4.1:2232283-2232302 | None:intergenic | 40.0% | |
| TTGATGGAAGTTTGATTGGG+TGG | + | chr4.1:2229098-2229117 | MS.gene06145:intron | 40.0% | |
| ! | AAGCCTTATCTCACTAAGTG+GGG | - | chr4.1:2228576-2228595 | None:intergenic | 40.0% |
| ! | AGAGGCATATGTGAAAATCC+AGG | - | chr4.1:2230552-2230571 | None:intergenic | 40.0% |
| ! | CTAAGCCTTATCTCACTAAG+TGG | - | chr4.1:2228578-2228597 | None:intergenic | 40.0% |
| ! | CTTTGGTTAACATGGGGTTT+TGG | - | chr4.1:2228206-2228225 | None:intergenic | 40.0% |
| ! | GAAGTTTGATTGGGTGGATT+CGG | + | chr4.1:2229104-2229123 | MS.gene06145:intron | 40.0% |
| ! | GACTGAGATGATTGTTGACT+TGG | - | chr4.1:2230851-2230870 | None:intergenic | 40.0% |
| ! | GCTAGGAGTGCAATTTATTG+TGG | + | chr4.1:2228753-2228772 | MS.gene06145:intron | 40.0% |
| ! | TCACTTTAGGGGGTCAAATA+AGG | - | chr4.1:2229716-2229735 | None:intergenic | 40.0% |
| ! | TGAACACTTGGTCTTTGTGT+CGG | - | chr4.1:2230189-2230208 | None:intergenic | 40.0% |
| ! | TGAGATTGATGACTCGTTGT+AGG | - | chr4.1:2230333-2230352 | None:intergenic | 40.0% |
| ! | TGTGATGTGTGATGATGCAA+AGG | + | chr4.1:2231560-2231579 | MS.gene06145:intron | 40.0% |
| ! | TTAGGTTTTCAACATGCTGG+TGG | + | chr4.1:2230654-2230673 | MS.gene06145:CDS | 40.0% |
| !! | ACTGGTTGCTGATTGTTTTG+AGG | - | chr4.1:2230162-2230181 | None:intergenic | 40.0% |
| !! | AGAAACCTGGAAAAGTGCTT+TGG | - | chr4.1:2228223-2228242 | None:intergenic | 40.0% |
| !! | ATTGCACACTTTGGAATAGC+AGG | + | chr4.1:2229570-2229589 | MS.gene06145:intron | 40.0% |
| !! | CCAGGTTTCTTTCTAGAACT+AGG | + | chr4.1:2228233-2228252 | MS.gene06145:intron | 40.0% |
| !! | CCTAGTTCTAGAAAGAAACC+TGG | - | chr4.1:2228236-2228255 | None:intergenic | 40.0% |
| !! | GAAGTCATGCTTTTTGTGTC+AGG | + | chr4.1:2232081-2232100 | MS.gene06145:intron | 40.0% |
| !! | GCAAAAAGGTGTTGCTAGAA+AGG | + | chr4.1:2228988-2229007 | MS.gene06145:intron | 40.0% |
| !! | GGAGCTATTGGTTGAACTTT+TGG | - | chr4.1:2230141-2230160 | None:intergenic | 40.0% |
| !! | GGAGTCGTTTGAGTTGTATA+AGG | + | chr4.1:2229757-2229776 | MS.gene06145:intron | 40.0% |
| !! | GTTAACCAAAGCACTTTTCC+AGG | + | chr4.1:2228215-2228234 | MS.gene06145:CDS | 40.0% |
| !! | GTTTTGGATGAGGATCTGTT+TGG | - | chr4.1:2228190-2228209 | None:intergenic | 40.0% |
| !! | TCATGCTTTTTGTGTCAGGT+TGG | + | chr4.1:2232085-2232104 | MS.gene06145:intron | 40.0% |
| !! | TGATGTGTCGGTTATAGCTT+TGG | + | chr4.1:2228686-2228705 | MS.gene06145:intron | 40.0% |
| !!! | GCTGTCATTTTCACAACCTT+TGG | + | chr4.1:2230077-2230096 | MS.gene06145:intron | 40.0% |
| !!! | TTAACATGGGGTTTTGGATG+AGG | - | chr4.1:2228200-2228219 | None:intergenic | 40.0% |
| AACAGATGCTGGAGCTACTT+GGG | - | chr4.1:2230412-2230431 | None:intergenic | 45.0% | |
| AACCAATTAACACCGGAAGG+AGG | + | chr4.1:2231831-2231850 | MS.gene06145:intron | 45.0% | |
| AACGTAGATCCAACACTAGG+AGG | - | chr4.1:2230806-2230825 | None:intergenic | 45.0% | |
| AATCAGGCCCAAATCATGCT+TGG | + | chr4.1:2230011-2230030 | MS.gene06145:intron | 45.0% | |
| AATTGCACACTTCGGAAGAG+TGG | + | chr4.1:2229735-2229754 | MS.gene06145:intron | 45.0% | |
| ACATCACTAGCAATGCCCTA+TGG | - | chr4.1:2228672-2228691 | None:intergenic | 45.0% | |
| AGCTAAGGTTGTGCAAGGTA+TGG | + | chr4.1:2228963-2228982 | MS.gene06145:intron | 45.0% | |
| AGGCTGCAGGACAATTTCAA+GGG | - | chr4.1:2232317-2232336 | None:intergenic | 45.0% | |
| AGGGTGAGAAAGAGAGAAAG+AGG | - | chr4.1:2228098-2228117 | None:intergenic | 45.0% | |
| AGTGTGCAATTCACTTTGGG+GGG | - | chr4.1:2229560-2229579 | None:intergenic | 45.0% | |
| ATGGCCGGAAAACAAGTAAG+CGG | + | chr4.1:2227983-2228002 | MS.gene06145:CDS | 45.0% | |
| ATTGCACACTTCGGAAGAGT+GGG | + | chr4.1:2229736-2229755 | MS.gene06145:intron | 45.0% | |
| CAAATGCCACAACAGCCTAA+AGG | + | chr4.1:2230375-2230394 | MS.gene06145:CDS | 45.0% | |
| CAGCACAAGATGTGCACAAA+TGG | - | chr4.1:2229256-2229275 | None:intergenic | 45.0% | |
| CTAAATGAGGTCGGCACAAA+TGG | - | chr4.1:2229196-2229215 | None:intergenic | 45.0% | |
| CTAAATTGGCACCAATCGGT+GGG | - | chr4.1:2230638-2230657 | None:intergenic | 45.0% | |
| CTCAAACTCAAATTCCTCCC+AGG | + | chr4.1:2230262-2230281 | MS.gene06145:CDS | 45.0% | |
| CTGCTGAAATCAGACCCAAA+TGG | - | chr4.1:2232118-2232137 | None:intergenic | 45.0% | |
| CTTATCTCACTAAGTGGGGT+CGG | - | chr4.1:2228572-2228591 | None:intergenic | 45.0% | |
| GAAAATCCAGGAGTCTGCAA+TGG | - | chr4.1:2230540-2230559 | None:intergenic | 45.0% | |
| GAAGATGAATGAACAGAGGG+TGG | - | chr4.1:2230465-2230484 | None:intergenic | 45.0% | |
| GAGAATCTAGCACAGCATTC+TGG | + | chr4.1:2232196-2232215 | MS.gene06145:CDS | 45.0% | |
| GATGATTGTGGAACAGATGC+TGG | - | chr4.1:2230423-2230442 | None:intergenic | 45.0% | |
| GATTTCTTTGTTCCGGAGGT+AGG | - | chr4.1:2232437-2232456 | None:intergenic | 45.0% | |
| GCACCATTCCAAGCATGATT+TGG | - | chr4.1:2230022-2230041 | None:intergenic | 45.0% | |
| GCAGATAAATCTCCTACCTC+CGG | + | chr4.1:2232422-2232441 | MS.gene06145:CDS | 45.0% | |
| GCTGGGATAGTTTCTGTTGT+AGG | + | chr4.1:2228791-2228810 | MS.gene06145:intron | 45.0% | |
| GGAACAGCAGCATATGAAAC+TGG | - | chr4.1:2230312-2230331 | None:intergenic | 45.0% | |
| GGACCAAAGAATTGAGACCA+AGG | + | chr4.1:2231532-2231551 | MS.gene06145:intron | 45.0% | |
| GGTAGGAGATTTATCTGCTC+CGG | - | chr4.1:2232420-2232439 | None:intergenic | 45.0% | |
| GGTTCAGTTCATATGCAGCT+GGG | + | chr4.1:2228774-2228793 | MS.gene06145:intron | 45.0% | |
| GTGAAGTGTGAAGTAGACAG+TGG | + | chr4.1:2231498-2231517 | MS.gene06145:intron | 45.0% | |
| GTGACACTTCAGACGATGTT+AGG | + | chr4.1:2231077-2231096 | MS.gene06145:intron | 45.0% | |
| TAAATTGGCACCAATCGGTG+GGG | - | chr4.1:2230637-2230656 | None:intergenic | 45.0% | |
| TAGCGAACCTGTGCTTACTT+TGG | + | chr4.1:2228882-2228901 | MS.gene06145:intron | 45.0% | |
| TAGGCTGCAGGACAATTTCA+AGG | - | chr4.1:2232318-2232337 | None:intergenic | 45.0% | |
| TCGGCTACATGGATCCTAAT+GGG | + | chr4.1:2231316-2231335 | MS.gene06145:intron | 45.0% | |
| TCTGATTTCAGCAGTCAAGC+TGG | + | chr4.1:2232124-2232143 | MS.gene06145:CDS | 45.0% | |
| TGGCTTACATGAAAGATGGG+CGG | - | chr4.1:2230699-2230718 | None:intergenic | 45.0% | |
| TGGTTCAGTTCATATGCAGC+TGG | + | chr4.1:2228773-2228792 | MS.gene06145:intron | 45.0% | |
| TTGTCAGCGAAATATGCAGG+TGG | + | chr4.1:2231605-2231624 | MS.gene06145:intron | 45.0% | |
| TTTGTGCACATCTTGTGCTG+TGG | + | chr4.1:2229256-2229275 | MS.gene06145:intron | 45.0% | |
| ! | CATTTTCGGAATAAGCCACC+AGG | - | chr4.1:2231219-2231238 | None:intergenic | 45.0% |
| ! | GCATATGAAACTGGCACTGA+AGG | - | chr4.1:2230303-2230322 | None:intergenic | 45.0% |
| ! | GTGTGATGATGCAAAGGAGT+GGG | + | chr4.1:2231566-2231585 | MS.gene06145:intron | 45.0% |
| ! | TGTGTGATGATGCAAAGGAG+TGG | + | chr4.1:2231565-2231584 | MS.gene06145:intron | 45.0% |
| ! | TTATCTTGAGTTGCTGCTCC+TGG | + | chr4.1:2231198-2231217 | MS.gene06145:intron | 45.0% |
| ! | TTGTGCCGACCTCATTTAGT+GGG | + | chr4.1:2229197-2229216 | MS.gene06145:intron | 45.0% |
| ! | TTTGTGCCGACCTCATTTAG+TGG | + | chr4.1:2229196-2229215 | MS.gene06145:intron | 45.0% |
| !! | GGCATTTGAGTTGGATGAAG+TGG | - | chr4.1:2230492-2230511 | None:intergenic | 45.0% |
| !!! | AGGCTGATTTTGGTGTTTCC+TGG | - | chr4.1:2230283-2230302 | None:intergenic | 45.0% |
| !!! | GGCTGATTTTGGTGTTTCCT+GGG | - | chr4.1:2230282-2230301 | None:intergenic | 45.0% |
| !!! | TGATTTTGGTGTTTCCTGGG+AGG | - | chr4.1:2230279-2230298 | None:intergenic | 45.0% |
| AAATTGGCACCAATCGGTGG+GGG | - | chr4.1:2230636-2230655 | None:intergenic | 50.0% | |
| AATGGTGCAGTCGCAACAAG+CGG | + | chr4.1:2230034-2230053 | MS.gene06145:CDS | 50.0% | |
| ACAGATGCTGGAGCTACTTG+GGG | - | chr4.1:2230411-2230430 | None:intergenic | 50.0% | |
| ACCAATCGGTGGGGGATATT+GGG | - | chr4.1:2230628-2230647 | None:intergenic | 50.0% | |
| AGATGCCCTTTAGGCTGTTG+TGG | - | chr4.1:2230384-2230403 | None:intergenic | 50.0% | |
| AGCAATGCCTTCTCCATGTC+TGG | - | chr4.1:2232375-2232394 | None:intergenic | 50.0% | |
| ATGCTGTGCTAGATTCTCCG+AGG | - | chr4.1:2232194-2232213 | None:intergenic | 50.0% | |
| ATTGGAGCAGGCTGAACACT+TGG | - | chr4.1:2230201-2230220 | None:intergenic | 50.0% | |
| CAGAGCATGACAAACACCCA+TGG | - | chr4.1:2230932-2230951 | None:intergenic | 50.0% | |
| CATCAACCATTGCAGACTCC+TGG | + | chr4.1:2230531-2230550 | MS.gene06145:CDS | 50.0% | |
| CATGCAGTTGACACCAGACA+TGG | + | chr4.1:2232359-2232378 | MS.gene06145:intron | 50.0% | |
| CCTAAATTGGCACCAATCGG+TGG | - | chr4.1:2230639-2230658 | None:intergenic | 50.0% | |
| CGACCCCACTTAGTGAGATA+AGG | + | chr4.1:2228570-2228589 | MS.gene06145:intron | 50.0% | |
| CTTACATGAAAGATGGGCGG+AGG | - | chr4.1:2230696-2230715 | None:intergenic | 50.0% | |
| CTTATCCCACCAAGTGGTGT+CGG | + | chr4.1:2231297-2231316 | MS.gene06145:intron | 50.0% | |
| GAACAGATGCTGGAGCTACT+TGG | - | chr4.1:2230413-2230432 | None:intergenic | 50.0% | |
| GACATGGCAGACATCCCATT+AGG | - | chr4.1:2231333-2231352 | None:intergenic | 50.0% | |
| GAGGCAGTTGGCATTTGAGT+TGG | - | chr4.1:2230501-2230520 | None:intergenic | 50.0% | |
| GATGAATGAACAGAGGGTGG+AGG | - | chr4.1:2230462-2230481 | None:intergenic | 50.0% | |
| GCACCTTGCACAGGCAATAT+TGG | - | chr4.1:2230219-2230238 | None:intergenic | 50.0% | |
| GCTCCAATATTGCCTGTGCA+AGG | + | chr4.1:2230213-2230232 | MS.gene06145:CDS | 50.0% | |
| GGAAAACAAGTAAGCGGCGA+GGG | + | chr4.1:2227989-2228008 | MS.gene06145:CDS | 50.0% | |
| GGATGGAAGGTTTGCACTGA+AGG | - | chr4.1:2230606-2230625 | None:intergenic | 50.0% | |
| GGCCCAAATCATGCTTGGAA+TGG | + | chr4.1:2230016-2230035 | MS.gene06145:intron | 50.0% | |
| GGGAACGTAGATCCAACACT+AGG | - | chr4.1:2230809-2230828 | None:intergenic | 50.0% | |
| GGTGCAAAACCTCCTAGTGT+TGG | + | chr4.1:2230794-2230813 | MS.gene06145:CDS | 50.0% | |
| GTCGGCTACATGGATCCTAA+TGG | + | chr4.1:2231315-2231334 | MS.gene06145:intron | 50.0% | |
| GTTGACACCAGACATGGAGA+AGG | + | chr4.1:2232365-2232384 | MS.gene06145:intron | 50.0% | |
| GTTTGCACTGAAGGTGGTCT+GGG | - | chr4.1:2230597-2230616 | None:intergenic | 50.0% | |
| TCCTCAGGGACCATCATCTA+TGG | + | chr4.1:2232219-2232238 | MS.gene06145:CDS | 50.0% | |
| TCTTGTATGGCACCTTGCAC+AGG | - | chr4.1:2230228-2230247 | None:intergenic | 50.0% | |
| TGCAACGAATGTGCAGCTGT+GGG | - | chr4.1:2230357-2230376 | None:intergenic | 50.0% | |
| TGCACAGGCAATATTGGAGC+AGG | - | chr4.1:2230213-2230232 | None:intergenic | 50.0% | |
| TGCTGAGCTAAGGTTGTGCA+AGG | + | chr4.1:2228958-2228977 | MS.gene06145:intron | 50.0% | |
| TGCTGTGCTAGATTCTCCGA+GGG | - | chr4.1:2232193-2232212 | None:intergenic | 50.0% | |
| TGGAAGGTTTGCACTGAAGG+TGG | - | chr4.1:2230603-2230622 | None:intergenic | 50.0% | |
| TGGGTGTTTGTCATGCTCTG+TGG | + | chr4.1:2230932-2230951 | MS.gene06145:intron | 50.0% | |
| TTCACGGACGCTCTTTCAGT+CGG | + | chr4.1:2229385-2229404 | MS.gene06145:intron | 50.0% | |
| TTGCAACGAATGTGCAGCTG+TGG | - | chr4.1:2230358-2230377 | None:intergenic | 50.0% | |
| TTGGATCTACGTTCCCACCA+GGG | + | chr4.1:2230813-2230832 | MS.gene06145:CDS | 50.0% | |
| ! | ACAGAGGGTGGAGGTATATG+TGG | - | chr4.1:2230453-2230472 | None:intergenic | 50.0% |
| ! | ACCATAGATGATGGTCCCTG+AGG | - | chr4.1:2232223-2232242 | None:intergenic | 50.0% |
| ! | CTCCTCCTTCCGGTGTTAAT+TGG | - | chr4.1:2231836-2231855 | None:intergenic | 50.0% |
| ! | GGGCATTGCTAGTGATGTGT+CGG | + | chr4.1:2228674-2228693 | MS.gene06145:intron | 50.0% |
| ! | GGTGCCATACAAGATCAAGC+AGG | + | chr4.1:2230234-2230253 | MS.gene06145:CDS | 50.0% |
| ! | TCACTTTGGGGGGTCAAGTA+AGG | - | chr4.1:2229550-2229569 | None:intergenic | 50.0% |
| !! | CCACCGATTGGTGCCAATTT+AGG | + | chr4.1:2230636-2230655 | MS.gene06145:CDS | 50.0% |
| !! | CTCGCCGCTTACTTGTTTTC+CGG | - | chr4.1:2227990-2228009 | None:intergenic | 50.0% |
| !! | CTGGCACTGAAGGCTGATTT+TGG | - | chr4.1:2230293-2230312 | None:intergenic | 50.0% |
| !! | GGATCTGTTTGGCTTGTTGC+TGG | - | chr4.1:2228179-2228198 | None:intergenic | 50.0% |
| AATGCCAACTGCCTCGAGTC+AGG | + | chr4.1:2230506-2230525 | MS.gene06145:CDS | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr4.1:2228564-2228583 | None:intergenic | 55.0% | |
| AGAGGGTCTTCTTGGATGCC+TGG | + | chr4.1:2232166-2232185 | MS.gene06145:CDS | 55.0% | |
| AGCACAGCATTCTGGTCCTC+AGG | + | chr4.1:2232204-2232223 | MS.gene06145:CDS | 55.0% | |
| ATAATTACCGCAGGAGGCCG+AGG | - | chr4.1:2232277-2232296 | None:intergenic | 55.0% | |
| ATGTAGCCGACACCACTTGG+TGG | - | chr4.1:2231306-2231325 | None:intergenic | 55.0% | |
| CACCAATCGGTGGGGGATAT+TGG | - | chr4.1:2230629-2230648 | None:intergenic | 55.0% | |
| CATGAAAGATGGGCGGAGGA+AGG | - | chr4.1:2230692-2230711 | None:intergenic | 55.0% | |
| CCAATCGGTGGGGGATATTG+GGG | - | chr4.1:2230627-2230646 | None:intergenic | 55.0% | |
| CGAGGGTTTATCAGCGAACC+TGG | + | chr4.1:2228006-2228025 | MS.gene06145:CDS | 55.0% | |
| CGGAAAACAAGTAAGCGGCG+AGG | + | chr4.1:2227988-2228007 | MS.gene06145:CDS | 55.0% | |
| GATTCTTCGACATTCCGGCC+AGG | - | chr4.1:2228027-2228046 | None:intergenic | 55.0% | |
| GCACAGCATTCTGGTCCTCA+GGG | + | chr4.1:2232205-2232224 | MS.gene06145:CDS | 55.0% | |
| GCAGGTCATGAGTCTCACAC+CGG | + | chr4.1:2232398-2232417 | MS.gene06145:CDS | 55.0% | |
| GGTGCGGTATTTGTGCAGCT+AGG | + | chr4.1:2228736-2228755 | MS.gene06145:intron | 55.0% | |
| GGTTTATCAGCGAACCTGGC+CGG | + | chr4.1:2228010-2228029 | MS.gene06145:CDS | 55.0% | |
| GGTTTGCACTGAAGGTGGTC+TGG | - | chr4.1:2230598-2230617 | None:intergenic | 55.0% | |
| GTTGGATCTACGTTCCCACC+AGG | + | chr4.1:2230812-2230831 | MS.gene06145:CDS | 55.0% | |
| TCCATGTAGCCGACACCACT+TGG | - | chr4.1:2231309-2231328 | None:intergenic | 55.0% | |
| TGGGGAGTCAGATGCCCTTT+AGG | - | chr4.1:2230393-2230412 | None:intergenic | 55.0% | |
| TGGGGGATATTGGGGATGGA+AGG | - | chr4.1:2230619-2230638 | None:intergenic | 55.0% | |
| TGTAGCCGACACCACTTGGT+GGG | - | chr4.1:2231305-2231324 | None:intergenic | 55.0% | |
| TTCTTGGATGCCTGGTCCCT+CGG | + | chr4.1:2232174-2232193 | MS.gene06145:CDS | 55.0% | |
| ! | CCAAGCCTTATCCCACCAAG+TGG | + | chr4.1:2231291-2231310 | MS.gene06145:intron | 55.0% |
| ! | CCACTTGGTGGGATAAGGCT+TGG | - | chr4.1:2231294-2231313 | None:intergenic | 55.0% |
| ! | CGACACCACTTGGTGGGATA+AGG | - | chr4.1:2231299-2231318 | None:intergenic | 55.0% |
| ! | GTGCTGCTAATCAGCCTCCT+CGG | + | chr4.1:2232257-2232276 | MS.gene06145:CDS | 55.0% |
| ! | GTGTTGCTAGAAAGGGGCTG+TGG | + | chr4.1:2228996-2229015 | MS.gene06145:intron | 55.0% |
| ! | TCTTGAGTTGCTGCTCCTGG+TGG | + | chr4.1:2231201-2231220 | MS.gene06145:intron | 55.0% |
| !! | ACCAAGTGGTGTCGGCTACA+TGG | + | chr4.1:2231305-2231324 | MS.gene06145:intron | 55.0% |
| !! | GGAGAAGGCATTGCTTCAGC+AGG | + | chr4.1:2232380-2232399 | MS.gene06145:CDS | 55.0% |
| !! | GGTCTTTGTGTCGGCTGTAC+TGG | - | chr4.1:2230180-2230199 | None:intergenic | 55.0% |
| ACTGAAGGTGGTCTGGGCTG+CGG | - | chr4.1:2230591-2230610 | None:intergenic | 60.0% | |
| ATCTACGTTCCCACCAGGGC+AGG | + | chr4.1:2230817-2230836 | MS.gene06145:CDS | 60.0% | |
| CCCCAATATCCCCCACCGAT+TGG | + | chr4.1:2230624-2230643 | MS.gene06145:CDS | 60.0% | |
| GCTAGATTCTCCGAGGGACC+AGG | - | chr4.1:2232187-2232206 | None:intergenic | 60.0% | |
| GGTGGCAATGGTGGTTGCAG+AGG | - | chr4.1:2230570-2230589 | None:intergenic | 60.0% | |
| GTAGTAGTGCCTGCCCTGGT+GGG | - | chr4.1:2230829-2230848 | None:intergenic | 60.0% | |
| TCGGTGGGGGATATTGGGGA+TGG | - | chr4.1:2230623-2230642 | None:intergenic | 60.0% | |
| ! | CTTGGTAGTAGTGCCTGCCC+TGG | - | chr4.1:2230833-2230852 | None:intergenic | 60.0% |
| ! | TGGTTGATGCGCCTGACTCG+AGG | - | chr4.1:2230520-2230539 | None:intergenic | 60.0% |
| ATTACCGCAGGAGGCCGAGG+AGG | - | chr4.1:2232274-2232293 | None:intergenic | 65.0% | |
| GGTAGTAGTGCCTGCCCTGG+TGG | - | chr4.1:2230830-2230849 | None:intergenic | 65.0% | |
| ! | TGCGCCTGACTCGAGGCAGT+TGG | - | chr4.1:2230513-2230532 | None:intergenic | 65.0% |
| CTGGGCTGCGGTGGCAATGG+TGG | - | chr4.1:2230579-2230598 | None:intergenic | 70.0% | |
| GAAGGTGGTCTGGGCTGCGG+TGG | - | chr4.1:2230588-2230607 | None:intergenic | 70.0% | |
| GGTCTGGGCTGCGGTGGCAA+TGG | - | chr4.1:2230582-2230601 | None:intergenic | 70.0% | |
| TCAGCCTCCTCGGCCTCCTG+CGG | + | chr4.1:2232267-2232286 | MS.gene06145:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 2227983 | 2232491 | 2227983 | ID=MS.gene06145 |
| chr4.1 | mRNA | 2227983 | 2232491 | 2227983 | ID=MS.gene06145.t1;Parent=MS.gene06145 |
| chr4.1 | exon | 2227983 | 2228075 | 2227983 | ID=MS.gene06145.t1.exon1;Parent=MS.gene06145.t1 |
| chr4.1 | CDS | 2227983 | 2228075 | 2227983 | ID=cds.MS.gene06145.t1;Parent=MS.gene06145.t1 |
| chr4.1 | exon | 2228159 | 2228236 | 2228159 | ID=MS.gene06145.t1.exon2;Parent=MS.gene06145.t1 |
| chr4.1 | CDS | 2228159 | 2228236 | 2228159 | ID=cds.MS.gene06145.t1;Parent=MS.gene06145.t1 |
| chr4.1 | exon | 2230017 | 2230055 | 2230017 | ID=MS.gene06145.t1.exon3;Parent=MS.gene06145.t1 |
| chr4.1 | CDS | 2230017 | 2230055 | 2230017 | ID=cds.MS.gene06145.t1;Parent=MS.gene06145.t1 |
| chr4.1 | exon | 2230135 | 2230710 | 2230135 | ID=MS.gene06145.t1.exon4;Parent=MS.gene06145.t1 |
| chr4.1 | CDS | 2230135 | 2230710 | 2230135 | ID=cds.MS.gene06145.t1;Parent=MS.gene06145.t1 |
| chr4.1 | exon | 2230791 | 2230880 | 2230791 | ID=MS.gene06145.t1.exon5;Parent=MS.gene06145.t1 |
| chr4.1 | CDS | 2230791 | 2230880 | 2230791 | ID=cds.MS.gene06145.t1;Parent=MS.gene06145.t1 |
| chr4.1 | exon | 2232103 | 2232288 | 2232103 | ID=MS.gene06145.t1.exon6;Parent=MS.gene06145.t1 |
| chr4.1 | CDS | 2232103 | 2232288 | 2232103 | ID=cds.MS.gene06145.t1;Parent=MS.gene06145.t1 |
| chr4.1 | exon | 2232366 | 2232491 | 2232366 | ID=MS.gene06145.t1.exon7;Parent=MS.gene06145.t1 |
| chr4.1 | CDS | 2232366 | 2232491 | 2232366 | ID=cds.MS.gene06145.t1;Parent=MS.gene06145.t1 |
| Gene Sequence |
| Protein sequence |
