Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06149.t1 | KEH21374.1 | 95.3 | 602 | 28 | 0 | 3 | 604 | 2 | 603 | 0.00E+00 | 1148.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06149.t1 | A0JJX5 | 37.4 | 115 | 65 | 4 | 471 | 580 | 256 | 368 | 1.2e-08 | 63.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06149.t1 | A0A072TV64 | 95.3 | 602 | 28 | 0 | 3 | 604 | 2 | 603 | 0.0e+00 | 1148.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050704 | MS.gene06149 | 0.833679 | 4.64E-56 | -1.69E-46 |
MS.gene05842 | MS.gene06149 | 0.82042 | 6.92E-53 | -1.69E-46 |
MS.gene059517 | MS.gene06149 | 0.801794 | 7.61E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06149.t1 | MTR_8g104330 | 95.349 | 602 | 28 | 0 | 3 | 604 | 2 | 603 | 0.0 | 1183 |
MS.gene06149.t1 | MTR_8g104330 | 95.349 | 602 | 28 | 0 | 3 | 604 | 2 | 603 | 0.0 | 1180 |
MS.gene06149.t1 | MTR_8g104330 | 96.262 | 535 | 20 | 0 | 70 | 604 | 16 | 550 | 0.0 | 1064 |
MS.gene06149.t1 | MTR_6g084400 | 69.357 | 607 | 173 | 6 | 3 | 601 | 2 | 603 | 0.0 | 845 |
MS.gene06149.t1 | MTR_4g115660 | 22.117 | 529 | 336 | 23 | 100 | 593 | 69 | 556 | 4.46e-12 | 69.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06149.t1 | AT3G18370 | 54.636 | 604 | 258 | 7 | 5 | 602 | 7 | 600 | 0.0 | 619 |
MS.gene06149.t1 | AT3G18370 | 28.235 | 170 | 97 | 4 | 423 | 592 | 571 | 715 | 4.87e-11 | 66.2 |
MS.gene06149.t1 | AT1G05500 | 21.415 | 523 | 341 | 17 | 100 | 593 | 69 | 550 | 5.96e-14 | 75.5 |
Find 152 sgRNAs with CRISPR-Local
Find 333 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGAAGCTTCTTCCAAATTAT+TGG | 0.132238 | 4.1:-2198607 | None:intergenic |
CAAAGGTATGCTTCTTTAAT+AGG | 0.179177 | 4.1:+2203217 | MS.gene06149:CDS |
TTTGATCATTACCAATAATT+TGG | 0.180864 | 4.1:+2198596 | MS.gene06149:CDS |
GACTTAAAATAGAAGCAATT+TGG | 0.181599 | 4.1:+2203175 | MS.gene06149:CDS |
GTTTGCCTGCAGTTGATTTA+AGG | 0.188371 | 4.1:+2200436 | MS.gene06149:CDS |
GCAAAGAGAAGAAGGATAAT+TGG | 0.199824 | 4.1:-2198750 | None:intergenic |
GATTAACAGTCTTCATATTA+AGG | 0.202883 | 4.1:+2199717 | MS.gene06149:CDS |
AAGCTTAGGATTAAAATAAT+TGG | 0.210272 | 4.1:-2199084 | None:intergenic |
TTTGCTTCACTTTCACTAAT+TGG | 0.211318 | 4.1:-2198644 | None:intergenic |
ATATATGTTTCAGTGATTTC+TGG | 0.224641 | 4.1:+2200480 | MS.gene06149:CDS |
TTGACAGCGACTCCTGAAAA+TGG | 0.243030 | 4.1:+2199621 | MS.gene06149:intron |
CCTAGCATCTTGTGAAATTA+AGG | 0.272929 | 4.1:+2200761 | MS.gene06149:CDS |
ATGGGATACGACATTTAATA+TGG | 0.276237 | 4.1:+2200665 | MS.gene06149:CDS |
TTTCTGGAAACAAACTTTCT+AGG | 0.288787 | 4.1:+2200496 | MS.gene06149:CDS |
CACTAAAGCATTTCACAATT+AGG | 0.290537 | 4.1:-2203035 | None:intergenic |
CCTCCCAGTTTGGGCCTTCA+AGG | 0.291000 | 4.1:+2199418 | MS.gene06149:CDS |
TGGTAGTGCACATGTAAATT+TGG | 0.295602 | 4.1:+2203083 | MS.gene06149:CDS |
TCAACAATTGTGTGGGCAAT+AGG | 0.296961 | 4.1:+2201752 | MS.gene06149:CDS |
TGGATCACGCCCTCCCAGTT+TGG | 0.307725 | 4.1:+2199408 | MS.gene06149:CDS |
ATCTATTGTTGTCACAAATA+TGG | 0.313272 | 4.1:+2199060 | MS.gene06149:CDS |
GGATCACGCCCTCCCAGTTT+GGG | 0.338838 | 4.1:+2199409 | MS.gene06149:CDS |
CTTGATGCAAAAGACAGATT+TGG | 0.340577 | 4.1:+2202716 | MS.gene06149:CDS |
TGGGCAATAGGGCCTGATTC+TGG | 0.355523 | 4.1:+2201764 | MS.gene06149:CDS |
CCATACTGCAACTTAATGTA+AGG | 0.356510 | 4.1:-2202749 | None:intergenic |
AAGACTGTTAATCACAATTC+TGG | 0.357434 | 4.1:-2199707 | None:intergenic |
GACTGGTACAAGGGTCAATC+AGG | 0.359705 | 4.1:+2203109 | MS.gene06149:CDS |
CGGAAATTTCACCTCTACTA+TGG | 0.360153 | 4.1:-2199123 | None:intergenic |
ACTTAAAATAGAAGCAATTT+GGG | 0.369605 | 4.1:+2203176 | MS.gene06149:CDS |
GCCTGGTGTTTCTCCTTGGC+TGG | 0.370816 | 4.1:+2200104 | MS.gene06149:CDS |
AGGAGAACAGGTGTGCGTTT+TGG | 0.372091 | 4.1:+2200630 | MS.gene06149:CDS |
TGGGCCTTCAAGGGATTAGA+TGG | 0.373329 | 4.1:+2199428 | MS.gene06149:CDS |
CCTTACATTAAGTTGCAGTA+TGG | 0.376835 | 4.1:+2202749 | MS.gene06149:CDS |
AATCCCTTGAAGGCCCAAAC+TGG | 0.381812 | 4.1:-2199422 | None:intergenic |
TTTGCTATTACACCAGAATC+AGG | 0.393362 | 4.1:-2201776 | None:intergenic |
TAGTCATACTTCACACTGTC+AGG | 0.393443 | 4.1:-2200738 | None:intergenic |
ATGGTCAACCTCTGGTGATC+AGG | 0.399087 | 4.1:+2199447 | MS.gene06149:CDS |
AGGAGGACTTGAACAAGAAA+TGG | 0.399481 | 4.1:+2198890 | MS.gene06149:CDS |
ATTAACAGTCTTCATATTAA+GGG | 0.404294 | 4.1:+2199718 | MS.gene06149:CDS |
CAGTCCTCAGAAATCACTTA+AGG | 0.407068 | 4.1:+2202628 | MS.gene06149:CDS |
CAGACAGCAGTTGGAGTAGT+AGG | 0.407160 | 4.1:-2202970 | None:intergenic |
TCAATACTCACTATAAATCT+TGG | 0.408027 | 4.1:-2199253 | None:intergenic |
CCACTTGAAGGAGTGAGTTC+TGG | 0.410382 | 4.1:+2203144 | MS.gene06149:CDS |
GCAGGAAAGGGTTGAAGTGC+TGG | 0.418455 | 4.1:+2199375 | MS.gene06149:intron |
TTGCTTGGCTTATTCACAAA+TGG | 0.420515 | 4.1:+2198703 | MS.gene06149:CDS |
AAGGATAATTGGAAGGCAAT+TGG | 0.423891 | 4.1:-2198739 | None:intergenic |
AGTTGCCTGGTGTTTCTCCT+TGG | 0.424831 | 4.1:+2200100 | MS.gene06149:CDS |
CTACTACTCCAACTGCTGTC+TGG | 0.428303 | 4.1:+2202971 | MS.gene06149:CDS |
GATAACCTTGTTGAAAGCTT+AGG | 0.429137 | 4.1:-2199098 | None:intergenic |
TTCAAGGGGAGGCAACAAAA+TGG | 0.429566 | 4.1:+2200525 | MS.gene06149:CDS |
CAACAATTGTGTGGGCAATA+GGG | 0.436310 | 4.1:+2201753 | MS.gene06149:CDS |
AGCATACCTTTGATCCCTCT+TGG | 0.438342 | 4.1:-2203206 | None:intergenic |
CTCCCAGTTTGGGCCTTCAA+GGG | 0.443301 | 4.1:+2199419 | MS.gene06149:CDS |
CAGGCAACTCAGTGGCTGAT+TGG | 0.445771 | 4.1:-2200086 | None:intergenic |
ACTTTCTAGGAGTTGCTTCA+AGG | 0.450247 | 4.1:+2200509 | MS.gene06149:CDS |
GTTAGAATAGGAATTGCCTT+TGG | 0.450508 | 4.1:+2200051 | MS.gene06149:CDS |
GAAATGCTTGTCCCATTTGA+GGG | 0.462374 | 4.1:+2201827 | MS.gene06149:CDS |
TAGGAATTGCCTTTGGAAGC+GGG | 0.463344 | 4.1:+2200058 | MS.gene06149:CDS |
TGAAAGTGAAGCAAAATTCA+CGG | 0.473775 | 4.1:+2198652 | MS.gene06149:CDS |
GAGGAGCTGACAAGGAGAAC+AGG | 0.474710 | 4.1:+2200618 | MS.gene06149:CDS |
TGAAATGCTTGTCCCATTTG+AGG | 0.476657 | 4.1:+2201826 | MS.gene06149:CDS |
TGACAGCGACTCCTGAAAAT+GGG | 0.479324 | 4.1:+2199622 | MS.gene06149:intron |
CTGAGGACTGGCATGGAGGT+TGG | 0.491010 | 4.1:-2202615 | None:intergenic |
GCAAAACATGCAAAGTTATG+TGG | 0.493121 | 4.1:+2201794 | MS.gene06149:CDS |
TCTACACCTGAGGTTAGAAT+AGG | 0.496065 | 4.1:+2200039 | MS.gene06149:CDS |
CTGCAGGCAAACTGAAACAG+CGG | 0.498690 | 4.1:-2200425 | None:intergenic |
GATTTAAGGAAGTATGCTGT+TGG | 0.500240 | 4.1:+2200450 | MS.gene06149:CDS |
CTTAAGTGATTTCTGAGGAC+TGG | 0.500924 | 4.1:-2202627 | None:intergenic |
ATAGGAATTGCCTTTGGAAG+CGG | 0.505307 | 4.1:+2200057 | MS.gene06149:CDS |
CAACAAAATGGCACAAGTAA+TGG | 0.505516 | 4.1:+2200537 | MS.gene06149:CDS |
TTGACCATCTAATCCCTTGA+AGG | 0.505697 | 4.1:-2199432 | None:intergenic |
CATTGTTCCAATGTTGTGAC+AGG | 0.505847 | 4.1:-2199026 | None:intergenic |
CAATCAGCCACTGAGTTGCC+TGG | 0.509829 | 4.1:+2200087 | MS.gene06149:CDS |
GACGTATGGATCCCACTTGA+AGG | 0.510497 | 4.1:+2203132 | MS.gene06149:CDS |
CTTTCTAGGAGTTGCTTCAA+GGG | 0.512264 | 4.1:+2200510 | MS.gene06149:CDS |
GTGTAGATGCAAAGAGAAGA+AGG | 0.514630 | 4.1:-2198758 | None:intergenic |
TTTGAGGTAGATGAGAATAG+TGG | 0.517481 | 4.1:+2203003 | MS.gene06149:CDS |
GCAATTCCTATTCTAACCTC+AGG | 0.518982 | 4.1:-2200045 | None:intergenic |
ATGGTTGCTAAGCTTTCCGT+TGG | 0.521021 | 4.1:+2199679 | MS.gene06149:CDS |
TTAAATGTCGTATCCCATCT+TGG | 0.523652 | 4.1:-2200660 | None:intergenic |
CTAGGAGTTGCTTCAAGGGG+AGG | 0.523911 | 4.1:+2200514 | MS.gene06149:CDS |
GGGATTAGATGGTCAACCTC+TGG | 0.525778 | 4.1:+2199439 | MS.gene06149:CDS |
AGTCCTCAGAAATCACTTAA+GGG | 0.530108 | 4.1:+2202629 | MS.gene06149:CDS |
AAGGGTCAATCAGGGACGTA+TGG | 0.535171 | 4.1:+2203118 | MS.gene06149:CDS |
TGAGAATTGTAGTGAAAGAG+TGG | 0.540272 | 4.1:+2202564 | MS.gene06149:CDS |
ACATGTAAATTTGGAAGGAC+TGG | 0.542178 | 4.1:+2203092 | MS.gene06149:CDS |
AATTTGGAAGGACTGGTACA+AGG | 0.542219 | 4.1:+2203099 | MS.gene06149:CDS |
GTTGTGACACCAATACTAGA+TGG | 0.544685 | 4.1:+2199991 | MS.gene06149:CDS |
CACAATTCTGGCAGTACCAA+CGG | 0.547971 | 4.1:-2199695 | None:intergenic |
CCTTAATTTCACAAGATGCT+AGG | 0.548400 | 4.1:-2200761 | None:intergenic |
ATCCCTTGAAGGCCCAAACT+GGG | 0.552497 | 4.1:-2199421 | None:intergenic |
TAGAAGCGGAGGAGCTGACA+AGG | 0.553685 | 4.1:+2200610 | MS.gene06149:CDS |
TACTTCCTTAAATCAACTGC+AGG | 0.555104 | 4.1:-2200441 | None:intergenic |
ATTTGGAAGGACTGGTACAA+GGG | 0.556965 | 4.1:+2203100 | MS.gene06149:CDS |
GATAACTGTTGTGGAAGCAA+AGG | 0.557052 | 4.1:+2202691 | MS.gene06149:CDS |
GAAACTTAAGATAACTGTTG+TGG | 0.557431 | 4.1:+2202682 | MS.gene06149:CDS |
TTAAGGAAGTATGCTGTTGG+AGG | 0.563370 | 4.1:+2200453 | MS.gene06149:CDS |
GCAGTTGGAGTAGTAGGAGG+AGG | 0.566786 | 4.1:-2202964 | None:intergenic |
GACATTTGTAGAGGTAGAAG+CGG | 0.571411 | 4.1:+2200596 | MS.gene06149:CDS |
ATTGTAGCCTGTCACAACAT+TGG | 0.572141 | 4.1:+2199019 | MS.gene06149:intron |
CATTAAGTTGCAGTATGGAA+AGG | 0.575253 | 4.1:+2202754 | MS.gene06149:CDS |
CATACTGCAACTTAATGTAA+GGG | 0.576632 | 4.1:-2202748 | None:intergenic |
GTATCATTCCAGACAGCAGT+TGG | 0.577863 | 4.1:-2202979 | None:intergenic |
GTGATTTCTGAGGACTGGCA+TGG | 0.577904 | 4.1:-2202622 | None:intergenic |
TTCATTTGTATCTACACCTG+AGG | 0.578623 | 4.1:+2200029 | MS.gene06149:CDS |
CCAGAACTCACTCCTTCAAG+TGG | 0.579493 | 4.1:-2203144 | None:intergenic |
CTTGAAGGCCCAAACTGGGA+GGG | 0.587914 | 4.1:-2199417 | None:intergenic |
GGAATTGCCTTTGGAAGCGG+GGG | 0.588283 | 4.1:+2200060 | MS.gene06149:CDS |
ATTTGTAGAGGTAGAAGCGG+AGG | 0.594686 | 4.1:+2200599 | MS.gene06149:CDS |
TAAAATAGAAGCAATTTGGG+TGG | 0.594996 | 4.1:+2203179 | MS.gene06149:CDS |
AGGAATTGCCTTTGGAAGCG+GGG | 0.597693 | 4.1:+2200059 | MS.gene06149:CDS |
AAAGAGTGGCAATTCTCTGA+TGG | 0.601133 | 4.1:+2202578 | MS.gene06149:CDS |
GGAGAACCAAGAGGGATCAA+AGG | 0.603156 | 4.1:+2203200 | MS.gene06149:CDS |
AGAGAAGAAGGATAATTGGA+AGG | 0.604569 | 4.1:-2198746 | None:intergenic |
TAATTTGAACATACCAGCCA+AGG | 0.606696 | 4.1:-2200117 | None:intergenic |
AAATGCTTGTCCCATTTGAG+GGG | 0.608513 | 4.1:+2201828 | MS.gene06149:CDS |
AAACTGAAACAGCGGCGCCG+AGG | 0.611310 | 4.1:-2200417 | None:intergenic |
ACAGCAGTTGGAGTAGTAGG+AGG | 0.613903 | 4.1:-2202967 | None:intergenic |
TTTCTAGGAGTTGCTTCAAG+GGG | 0.619070 | 4.1:+2200511 | MS.gene06149:CDS |
ACATGCAAAGTTATGTGGAG+AGG | 0.622013 | 4.1:+2201799 | MS.gene06149:CDS |
AGTGCACATGTAAATTTGGA+AGG | 0.622106 | 4.1:+2203087 | MS.gene06149:CDS |
AGTCATACTTCACACTGTCA+GGG | 0.623937 | 4.1:-2200737 | None:intergenic |
TCGTATCATAGTCAATACTT+CGG | 0.625393 | 4.1:+2198915 | MS.gene06149:CDS |
TAAAGACCATGGTGGAACCT+CGG | 0.628622 | 4.1:+2200400 | MS.gene06149:CDS |
GATCCCTTAAGTGATTTCTG+AGG | 0.629927 | 4.1:-2202632 | None:intergenic |
AATGCTTGTCCCATTTGAGG+GGG | 0.631151 | 4.1:+2201829 | MS.gene06149:CDS |
GGACTTGCAGACATTTGTAG+AGG | 0.638975 | 4.1:+2200587 | MS.gene06149:CDS |
ACTGGTACAAGGGTCAATCA+GGG | 0.643146 | 4.1:+2203110 | MS.gene06149:CDS |
CCTTGAAGGCCCAAACTGGG+AGG | 0.643279 | 4.1:-2199418 | None:intergenic |
TGCAGTATGGGAATTACCAG+CGG | 0.644594 | 4.1:+2198857 | MS.gene06149:intron |
GTCATACTTCACACTGTCAG+GGG | 0.645119 | 4.1:-2200736 | None:intergenic |
CCAGCGGAAAATACTTGAGG+AGG | 0.649319 | 4.1:+2198873 | MS.gene06149:CDS |
ACCAGCCAAGGAGAAACACC+AGG | 0.651021 | 4.1:-2200105 | None:intergenic |
TGACACTTTGGTAAAGACCA+TGG | 0.652545 | 4.1:+2200389 | MS.gene06149:CDS |
TCATACTTCACACTGTCAGG+GGG | 0.655219 | 4.1:-2200735 | None:intergenic |
ATTTGGGTGGAGAACCAAGA+GGG | 0.655601 | 4.1:+2203192 | MS.gene06149:CDS |
AGAAGAAAACGTGAGCGACA+AGG | 0.657017 | 4.1:+2200566 | MS.gene06149:CDS |
GGATGATTCAACAATTGTGT+GGG | 0.659331 | 4.1:+2201745 | MS.gene06149:CDS |
AAGGTTATCAGCCATAGTAG+AGG | 0.659514 | 4.1:+2199112 | MS.gene06149:CDS |
TTACCAGCGGAAAATACTTG+AGG | 0.661991 | 4.1:+2198870 | MS.gene06149:CDS |
CAGAACTCACTCCTTCAAGT+GGG | 0.666922 | 4.1:-2203143 | None:intergenic |
AAATAAAACCTGATCACCAG+AGG | 0.670333 | 4.1:-2199455 | None:intergenic |
AGGATGATTCAACAATTGTG+TGG | 0.671943 | 4.1:+2201744 | MS.gene06149:CDS |
CGATGAGAAGATGAGGCATG+TGG | 0.684411 | 4.1:+2201721 | MS.gene06149:intron |
TGAGAAGATGAGGCATGTGG+AGG | 0.692283 | 4.1:+2201724 | MS.gene06149:intron |
CACTTTGGTAAAGACCATGG+TGG | 0.701388 | 4.1:+2200392 | MS.gene06149:CDS |
TTAATCCTAAGCTTTCAACA+AGG | 0.704753 | 4.1:+2199093 | MS.gene06149:CDS |
CATACTTCACACTGTCAGGG+GGG | 0.713851 | 4.1:-2200734 | None:intergenic |
GCGGCGCCGAGGTTCCACCA+TGG | 0.714667 | 4.1:-2200406 | None:intergenic |
CAACATTGGAACAATGTGAG+TGG | 0.720711 | 4.1:+2199033 | MS.gene06149:CDS |
ATTTCTGAGGACTGGCATGG+AGG | 0.740443 | 4.1:-2202619 | None:intergenic |
AGAAACACCAGGCAACTCAG+TGG | 0.743799 | 4.1:-2200094 | None:intergenic |
AATTTGGGTGGAGAACCAAG+AGG | 0.782070 | 4.1:+2203191 | MS.gene06149:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGAATTAAAAAAAGTTAAAA+TGG | - | chr4.1:2202528-2202547 | None:intergenic | 10.0% |
!! | GATTATATAATCATTTAATA+TGG | + | chr4.1:2202181-2202200 | MS.gene06149:intron | 10.0% |
!! | TATAAATATATTAAAAACCT+TGG | - | chr4.1:2202847-2202866 | None:intergenic | 10.0% |
!!! | ATTTTAATATAGAATTCTAT+TGG | + | chr4.1:2199596-2199615 | MS.gene06149:intron | 10.0% |
!! | ACTAAAAAACTTATTTCAAT+CGG | - | chr4.1:2202489-2202508 | None:intergenic | 15.0% |
!! | ATATTAAAATCTCATATAAG+TGG | - | chr4.1:2199586-2199605 | None:intergenic | 15.0% |
!! | GTTTATGTAAAAAACAATTA+AGG | - | chr4.1:2201025-2201044 | None:intergenic | 15.0% |
!!! | ATAGATACTTTGTTTATTTA+AGG | + | chr4.1:2199514-2199533 | MS.gene06149:intron | 15.0% |
!!! | TAATTCTGTTTTTTAGTTAA+AGG | + | chr4.1:2202541-2202560 | MS.gene06149:intron | 15.0% |
!! | AAATTAATATGGATGCAATA+GGG | + | chr4.1:2201388-2201407 | MS.gene06149:intron | 20.0% |
!! | AAGCTTAGGATTAAAATAAT+TGG | - | chr4.1:2199087-2199106 | None:intergenic | 20.0% |
!! | ACTTAAAATAGAAGCAATTT+GGG | + | chr4.1:2203176-2203195 | MS.gene06149:CDS | 20.0% |
!! | AGAACTATAAATATGATTAC+TGG | + | chr4.1:2199861-2199880 | MS.gene06149:intron | 20.0% |
!! | ATTAACAGTCTTCATATTAA+GGG | + | chr4.1:2199718-2199737 | MS.gene06149:CDS | 20.0% |
!! | GAATATATATAAGCACTTAA+GGG | - | chr4.1:2199564-2199583 | None:intergenic | 20.0% |
!! | GAATGATTAGATTATAGAAA+AGG | - | chr4.1:2199953-2199972 | None:intergenic | 20.0% |
!! | TATAATCATTTAATATGGAG+AGG | + | chr4.1:2202186-2202205 | MS.gene06149:intron | 20.0% |
!! | TCAAAAGTTAAATTCATAGA+TGG | - | chr4.1:2201254-2201273 | None:intergenic | 20.0% |
!! | TGTACATATTTATAAAGGAT+GGG | - | chr4.1:2201177-2201196 | None:intergenic | 20.0% |
!! | TTTGATCATTACCAATAATT+TGG | + | chr4.1:2198596-2198615 | MS.gene06149:CDS | 20.0% |
!!! | AATCATGTTCCTTTTATAAA+TGG | - | chr4.1:2202052-2202071 | None:intergenic | 20.0% |
!!! | ATCATGTTCCTTTTATAAAT+GGG | - | chr4.1:2202051-2202070 | None:intergenic | 20.0% |
!!! | ATTTAACTTTTGAAATGCAA+TGG | + | chr4.1:2201261-2201280 | MS.gene06149:intron | 20.0% |
!!! | CAATATGTATATATGGTTTT+TGG | + | chr4.1:2200843-2200862 | MS.gene06149:intron | 20.0% |
!!! | GTTTTAGGTGATAATTTAAA+AGG | + | chr4.1:2201518-2201537 | MS.gene06149:intron | 20.0% |
!!! | TGTTTATTTAAGGTCTATTA+TGG | + | chr4.1:2199524-2199543 | MS.gene06149:intron | 20.0% |
! | AACTTCACGACAAATTAATA+TGG | + | chr4.1:2201377-2201396 | MS.gene06149:intron | 25.0% |
! | AACTTGATGTCTATAATTTC+TGG | + | chr4.1:2200157-2200176 | MS.gene06149:intron | 25.0% |
! | AATTAATATGGATGCAATAG+GGG | + | chr4.1:2201389-2201408 | MS.gene06149:intron | 25.0% |
! | AGATTATCAATAACAGAATC+AGG | - | chr4.1:2202914-2202933 | None:intergenic | 25.0% |
! | AGTAAAAAGTTTAACCTGTA+TGG | - | chr4.1:2200370-2200389 | None:intergenic | 25.0% |
! | ATATATGTTTCAGTGATTTC+TGG | + | chr4.1:2200480-2200499 | MS.gene06149:CDS | 25.0% |
! | ATCTATTGTTGTCACAAATA+TGG | + | chr4.1:2199060-2199079 | MS.gene06149:CDS | 25.0% |
! | CAAATTAATATGGATGCAAT+AGG | + | chr4.1:2201387-2201406 | MS.gene06149:intron | 25.0% |
! | CTAGCAATTGGATTATTAAT+CGG | + | chr4.1:2200816-2200835 | MS.gene06149:intron | 25.0% |
! | GACAGATATTCAAATTAAGT+TGG | + | chr4.1:2202111-2202130 | MS.gene06149:intron | 25.0% |
! | GACTTAAAATAGAAGCAATT+TGG | + | chr4.1:2203175-2203194 | MS.gene06149:CDS | 25.0% |
! | GATTAACAGTCTTCATATTA+AGG | + | chr4.1:2199717-2199736 | MS.gene06149:CDS | 25.0% |
! | GGAATATATATAAGCACTTA+AGG | - | chr4.1:2199565-2199584 | None:intergenic | 25.0% |
! | GTACATATTTATAAAGGATG+GGG | - | chr4.1:2201176-2201195 | None:intergenic | 25.0% |
! | GTGTACATATTTATAAAGGA+TGG | - | chr4.1:2201178-2201197 | None:intergenic | 25.0% |
! | TAAAACGTCTAATTTGAACA+CGG | + | chr4.1:2201284-2201303 | MS.gene06149:intron | 25.0% |
! | TAAAATGCCAAAAAGACAAT+TGG | - | chr4.1:2198954-2198973 | None:intergenic | 25.0% |
! | TCAAATCTTCTTTCAAAAAC+TGG | + | chr4.1:2202656-2202675 | MS.gene06149:CDS | 25.0% |
! | TCAATACTCACTATAAATCT+TGG | - | chr4.1:2199256-2199275 | None:intergenic | 25.0% |
! | TTCAAATCAAGAAAGAAGAA+CGG | - | chr4.1:2201975-2201994 | None:intergenic | 25.0% |
! | TTCAGCAGGATTTATTAAAT+TGG | - | chr4.1:2199333-2199352 | None:intergenic | 25.0% |
! | TTTAGCAAAGTCAAAGATTA+AGG | - | chr4.1:2201076-2201095 | None:intergenic | 25.0% |
!! | AAATGCTTAATTTGAAGATC+CGG | - | chr4.1:2200985-2201004 | None:intergenic | 25.0% |
!! | ATATCTGTTTTACTCGTTTT+AGG | + | chr4.1:2202793-2202812 | MS.gene06149:intron | 25.0% |
!! | GACATGATTTTTATAGACAA+CGG | - | chr4.1:2200209-2200228 | None:intergenic | 25.0% |
!! | TAAACTTTTTACTGACACTT+TGG | + | chr4.1:2200377-2200396 | MS.gene06149:CDS | 25.0% |
!! | TAATTTGTCGTGAAGTTTAT+AGG | - | chr4.1:2201374-2201393 | None:intergenic | 25.0% |
!! | TGCTTTAGTGAAGAAATTTT+TGG | + | chr4.1:2203048-2203067 | MS.gene06149:CDS | 25.0% |
!!! | ATGGTTTTACATGATAATAC+AGG | + | chr4.1:2200684-2200703 | MS.gene06149:CDS | 25.0% |
!!! | ATTGGATGTTCAAACTTTTT+TGG | - | chr4.1:2199315-2199334 | None:intergenic | 25.0% |
!!! | ATTTTTGGAGATGAAAACAT+TGG | + | chr4.1:2203063-2203082 | MS.gene06149:CDS | 25.0% |
!!! | GATACATTCTTTATTTTCTG+AGG | + | chr4.1:2199917-2199936 | MS.gene06149:intron | 25.0% |
!!! | TCATCTTTATTTTGCAGTAT+GGG | + | chr4.1:2198845-2198864 | MS.gene06149:intron | 25.0% |
!!! | TGAGTATTGATCATTTTCTT+TGG | + | chr4.1:2199266-2199285 | MS.gene06149:intron | 25.0% |
!!! | TGTTTTTTTTTTTCGAACGT+GGG | + | chr4.1:2202386-2202405 | MS.gene06149:intron | 25.0% |
!!! | TTCATCTTTATTTTGCAGTA+TGG | + | chr4.1:2198844-2198863 | MS.gene06149:intron | 25.0% |
!!! | TTGTTTTTTTTTTTCGAACG+TGG | + | chr4.1:2202385-2202404 | MS.gene06149:intron | 25.0% |
AAAAACTGAACTTGTATAGC+CGG | + | chr4.1:2201547-2201566 | MS.gene06149:intron | 30.0% | |
AAAAGTTTAACCTGTATGGA+AGG | - | chr4.1:2200366-2200385 | None:intergenic | 30.0% | |
AAACTTATTTCAATCGGAAG+AGG | - | chr4.1:2202483-2202502 | None:intergenic | 30.0% | |
AAAGTCAAAGATTAAGGAAG+GGG | - | chr4.1:2201070-2201089 | None:intergenic | 30.0% | |
AAGACTGTTAATCACAATTC+TGG | - | chr4.1:2199710-2199729 | None:intergenic | 30.0% | |
AATATTGTTGAATCCTTGTC+TGG | + | chr4.1:2201492-2201511 | MS.gene06149:intron | 30.0% | |
ACGACGGTATTAAAAATAAG+AGG | - | chr4.1:2201653-2201672 | None:intergenic | 30.0% | |
ACTAAAGAAATAATTTCCGC+AGG | + | chr4.1:2199357-2199376 | MS.gene06149:intron | 30.0% | |
AGATTATAGAAAAGGACAAG+TGG | - | chr4.1:2199945-2199964 | None:intergenic | 30.0% | |
ATCTTCTTTCAAAAACTGGA+AGG | + | chr4.1:2202660-2202679 | MS.gene06149:CDS | 30.0% | |
ATGGGATACGACATTTAATA+TGG | + | chr4.1:2200665-2200684 | MS.gene06149:CDS | 30.0% | |
ATTAGATGAAAATCCAACAC+TGG | - | chr4.1:2201938-2201957 | None:intergenic | 30.0% | |
ATTTGAATCATGTGACACTT+TGG | - | chr4.1:2201231-2201250 | None:intergenic | 30.0% | |
CAAAGTCAAAGATTAAGGAA+GGG | - | chr4.1:2201071-2201090 | None:intergenic | 30.0% | |
CACACAAAAACAAACATCTA+TGG | - | chr4.1:2200796-2200815 | None:intergenic | 30.0% | |
CATACTGCAACTTAATGTAA+GGG | - | chr4.1:2202751-2202770 | None:intergenic | 30.0% | |
CTCCAATACATAAGAAAAGA+CGG | - | chr4.1:2199146-2199165 | None:intergenic | 30.0% | |
GAAACTTAAGATAACTGTTG+TGG | + | chr4.1:2202682-2202701 | MS.gene06149:CDS | 30.0% | |
GAAAGATACTTGAAACATCA+AGG | - | chr4.1:2200278-2200297 | None:intergenic | 30.0% | |
GCAGTTTGAATTAAGTGATT+AGG | + | chr4.1:2200181-2200200 | MS.gene06149:intron | 30.0% | |
GGTAGATGAAAAATCATAAG+TGG | + | chr4.1:2202132-2202151 | MS.gene06149:intron | 30.0% | |
GGTGGTGTACATATTTATAA+AGG | - | chr4.1:2201182-2201201 | None:intergenic | 30.0% | |
TAAAATAGAAGCAATTTGGG+TGG | + | chr4.1:2203179-2203198 | MS.gene06149:CDS | 30.0% | |
TCAAATCAAGAAAGAAGAAC+GGG | - | chr4.1:2201974-2201993 | None:intergenic | 30.0% | |
TCGTATCATAGTCAATACTT+CGG | + | chr4.1:2198915-2198934 | MS.gene06149:CDS | 30.0% | |
TGAAAGTGAAGCAAAATTCA+CGG | + | chr4.1:2198652-2198671 | MS.gene06149:CDS | 30.0% | |
TGAAGCTTCTTCCAAATTAT+TGG | - | chr4.1:2198610-2198629 | None:intergenic | 30.0% | |
TTAATCCTAAGCTTTCAACA+AGG | + | chr4.1:2199093-2199112 | MS.gene06149:CDS | 30.0% | |
TTTGCTTCACTTTCACTAAT+TGG | - | chr4.1:2198647-2198666 | None:intergenic | 30.0% | |
! | AAAGTATCTGGAACATCAAA+AGG | - | chr4.1:2202346-2202365 | None:intergenic | 30.0% |
! | CAAAGGTATGCTTCTTTAAT+AGG | + | chr4.1:2203217-2203236 | MS.gene06149:CDS | 30.0% |
! | CACTAAAGCATTTCACAATT+AGG | - | chr4.1:2203038-2203057 | None:intergenic | 30.0% |
! | CTGTTATTGATAATCTGTTC+AGG | + | chr4.1:2202918-2202937 | MS.gene06149:intron | 30.0% |
! | TTATTCTCGTTTTCATTGCT+TGG | + | chr4.1:2198688-2198707 | MS.gene06149:CDS | 30.0% |
! | TTCCGTCTTTTCTTATGTAT+TGG | + | chr4.1:2199141-2199160 | MS.gene06149:intron | 30.0% |
! | TTTCACTCCAATTGTCTTTT+TGG | + | chr4.1:2198944-2198963 | MS.gene06149:intron | 30.0% |
! | TTTCTGGAAACAAACTTTCT+AGG | + | chr4.1:2200496-2200515 | MS.gene06149:CDS | 30.0% |
! | TTTCTTTTGTGTCTCAGAAA+CGG | + | chr4.1:2199215-2199234 | MS.gene06149:intron | 30.0% |
!! | AATTATGCCATGAAAGTATC+TGG | - | chr4.1:2202358-2202377 | None:intergenic | 30.0% |
!! | ACTACTTTCATTTTCAAGAG+CGG | - | chr4.1:2202456-2202475 | None:intergenic | 30.0% |
!! | GTATTGATCATTTTCTTTGG+TGG | + | chr4.1:2199269-2199288 | MS.gene06149:intron | 30.0% |
!! | TTTCACGTTGATAATCTTTC+TGG | + | chr4.1:2202214-2202233 | MS.gene06149:intron | 30.0% |
!!! | CATTTTTGGAATAGAGGTAA+TGG | + | chr4.1:2201463-2201482 | MS.gene06149:intron | 30.0% |
!!! | GGATAACATTTTTGGAATAG+AGG | + | chr4.1:2201457-2201476 | MS.gene06149:intron | 30.0% |
!!! | GTGTTTTTAAAACTGGTTAC+TGG | + | chr4.1:2200955-2200974 | MS.gene06149:intron | 30.0% |
!!! | TATTGGAGTTTTGAGTTAGT+CGG | + | chr4.1:2199158-2199177 | MS.gene06149:intron | 30.0% |
!!! | TCTTATTTTTAATACCGTCG+TGG | + | chr4.1:2201652-2201671 | MS.gene06149:intron | 30.0% |
AAATAAAACCTGATCACCAG+AGG | - | chr4.1:2199458-2199477 | None:intergenic | 35.0% | |
AAGCTTTCTTTGCTTTATGG+TGG | + | chr4.1:2201888-2201907 | MS.gene06149:intron | 35.0% | |
AAGGATAATTGGAAGGCAAT+TGG | - | chr4.1:2198742-2198761 | None:intergenic | 35.0% | |
AAGTCAAAGATTAAGGAAGG+GGG | - | chr4.1:2201069-2201088 | None:intergenic | 35.0% | |
ACATGTAAATTTGGAAGGAC+TGG | + | chr4.1:2203092-2203111 | MS.gene06149:CDS | 35.0% | |
AGAAATAATTTCCGCAGGAA+AGG | + | chr4.1:2199362-2199381 | MS.gene06149:intron | 35.0% | |
AGAGAAGAAGGATAATTGGA+AGG | - | chr4.1:2198749-2198768 | None:intergenic | 35.0% | |
AGGATGATTCAACAATTGTG+TGG | + | chr4.1:2201744-2201763 | MS.gene06149:CDS | 35.0% | |
AGTCCTCAGAAATCACTTAA+GGG | + | chr4.1:2202629-2202648 | MS.gene06149:CDS | 35.0% | |
AGTGCACATGTAAATTTGGA+AGG | + | chr4.1:2203087-2203106 | MS.gene06149:CDS | 35.0% | |
ATAGTAGTTACCTTCCATAC+AGG | + | chr4.1:2200353-2200372 | MS.gene06149:intron | 35.0% | |
ATGTGACACTTTGGATCTAT+AGG | - | chr4.1:2201222-2201241 | None:intergenic | 35.0% | |
CAACAAAATGGCACAAGTAA+TGG | + | chr4.1:2200537-2200556 | MS.gene06149:CDS | 35.0% | |
CCATACTGCAACTTAATGTA+AGG | - | chr4.1:2202752-2202771 | None:intergenic | 35.0% | |
CCTAGCATCTTGTGAAATTA+AGG | + | chr4.1:2200761-2200780 | MS.gene06149:CDS | 35.0% | |
CCTTAATTTCACAAGATGCT+AGG | - | chr4.1:2200764-2200783 | None:intergenic | 35.0% | |
CGGCTGTCAATATGTATATA+TGG | + | chr4.1:2200836-2200855 | MS.gene06149:intron | 35.0% | |
CTTGATGCAAAAGACAGATT+TGG | + | chr4.1:2202716-2202735 | MS.gene06149:CDS | 35.0% | |
CTTGCATGCCCATTTATAAA+AGG | + | chr4.1:2202040-2202059 | MS.gene06149:intron | 35.0% | |
GAAATAATTTCCGCAGGAAA+GGG | + | chr4.1:2199363-2199382 | MS.gene06149:intron | 35.0% | |
GATAACCTTGTTGAAAGCTT+AGG | - | chr4.1:2199101-2199120 | None:intergenic | 35.0% | |
GCAAAACATGCAAAGTTATG+TGG | + | chr4.1:2201794-2201813 | MS.gene06149:CDS | 35.0% | |
GCAAAGAGAAGAAGGATAAT+TGG | - | chr4.1:2198753-2198772 | None:intergenic | 35.0% | |
GCAAAGTCAAAGATTAAGGA+AGG | - | chr4.1:2201072-2201091 | None:intergenic | 35.0% | |
GGATGATTCAACAATTGTGT+GGG | + | chr4.1:2201745-2201764 | MS.gene06149:CDS | 35.0% | |
GTCAAGCTTTCTTTGCTTTA+TGG | + | chr4.1:2201885-2201904 | MS.gene06149:intron | 35.0% | |
GTTAGAATAGGAATTGCCTT+TGG | + | chr4.1:2200051-2200070 | MS.gene06149:CDS | 35.0% | |
TAATTTGAACATACCAGCCA+AGG | - | chr4.1:2200120-2200139 | None:intergenic | 35.0% | |
TACTTCCTTAAATCAACTGC+AGG | - | chr4.1:2200444-2200463 | None:intergenic | 35.0% | |
TATATGAAGCTTTACCACGA+CGG | - | chr4.1:2201669-2201688 | None:intergenic | 35.0% | |
TCTCATCGACATACAGAAAT+AGG | - | chr4.1:2201709-2201728 | None:intergenic | 35.0% | |
TGATGTTCCAGATACTTTCA+TGG | + | chr4.1:2202348-2202367 | MS.gene06149:intron | 35.0% | |
TTAAATGTCGTATCCCATCT+TGG | - | chr4.1:2200663-2200682 | None:intergenic | 35.0% | |
TTATCTTACATTGCCAGTGT+TGG | + | chr4.1:2201922-2201941 | MS.gene06149:intron | 35.0% | |
TTCATTTGTATCTACACCTG+AGG | + | chr4.1:2200029-2200048 | MS.gene06149:CDS | 35.0% | |
TTCCAAGAATGAATGAGCAT+GGG | - | chr4.1:2200251-2200270 | None:intergenic | 35.0% | |
TTGCTTGGCTTATTCACAAA+TGG | + | chr4.1:2198703-2198722 | MS.gene06149:CDS | 35.0% | |
TTGGCTTAGATGATTGTAGT+GGG | - | chr4.1:2201145-2201164 | None:intergenic | 35.0% | |
TTTGCAAGTTGTATCTGCAA+TGG | + | chr4.1:2202244-2202263 | MS.gene06149:intron | 35.0% | |
! | AGTGCTTTTCCATCTAGTAT+TGG | - | chr4.1:2200003-2200022 | None:intergenic | 35.0% |
! | ATAGCTCTATTGCATGTCTA+AGG | - | chr4.1:2199780-2199799 | None:intergenic | 35.0% |
! | CATTAAGTTGCAGTATGGAA+AGG | + | chr4.1:2202754-2202773 | MS.gene06149:CDS | 35.0% |
! | CCTTACATTAAGTTGCAGTA+TGG | + | chr4.1:2202749-2202768 | MS.gene06149:CDS | 35.0% |
! | CTAAGGAGCATAAATGCAAA+GGG | - | chr4.1:2199763-2199782 | None:intergenic | 35.0% |
! | GAATGAGATGAGCATTTTGA+TGG | + | chr4.1:2199660-2199679 | MS.gene06149:CDS | 35.0% |
! | GATTTAAGGAAGTATGCTGT+TGG | + | chr4.1:2200450-2200469 | MS.gene06149:CDS | 35.0% |
! | GGGAAGTTTTTGTGAATTCA+TGG | + | chr4.1:2201409-2201428 | MS.gene06149:intron | 35.0% |
! | TCTAAGGAGCATAAATGCAA+AGG | - | chr4.1:2199764-2199783 | None:intergenic | 35.0% |
! | TGGTAGTGCACATGTAAATT+TGG | + | chr4.1:2203083-2203102 | MS.gene06149:CDS | 35.0% |
! | TGTCATGTATTGATGAACCA+AGG | + | chr4.1:2202827-2202846 | MS.gene06149:intron | 35.0% |
! | TTTCTTTAGTTCAGTTCAGC+AGG | - | chr4.1:2199347-2199366 | None:intergenic | 35.0% |
! | TTTGAGGTAGATGAGAATAG+TGG | + | chr4.1:2203003-2203022 | MS.gene06149:CDS | 35.0% |
!! | AAAACTGGTTACTGGTTTAC+CGG | + | chr4.1:2200963-2200982 | MS.gene06149:intron | 35.0% |
!! | GTGAGAGTTATTTTGCAGAT+AGG | - | chr4.1:2201047-2201066 | None:intergenic | 35.0% |
!! | TCCTGAAAATGGGTTTTGAT+TGG | + | chr4.1:2199632-2199651 | MS.gene06149:CDS | 35.0% |
!! | TGTCTGGAATGATACTTTTG+AGG | + | chr4.1:2202987-2203006 | MS.gene06149:CDS | 35.0% |
!! | TGTTTTTGTGTGCTAGCAAT+TGG | + | chr4.1:2200804-2200823 | MS.gene06149:intron | 35.0% |
!! | TTTGCTATTACACCAGAATC+AGG | - | chr4.1:2201779-2201798 | None:intergenic | 35.0% |
!!! | ATCCTTGTCTGGTTTGTTTT+AGG | + | chr4.1:2201503-2201522 | MS.gene06149:intron | 35.0% |
!!! | CCTGAAAATGGGTTTTGATT+GGG | + | chr4.1:2199633-2199652 | MS.gene06149:CDS | 35.0% |
!!! | TTTTGGTTCAACTCCAAGAT+GGG | + | chr4.1:2200647-2200666 | MS.gene06149:CDS | 35.0% |
AAAGAGTGGCAATTCTCTGA+TGG | + | chr4.1:2202578-2202597 | MS.gene06149:CDS | 40.0% | |
AAATGCTTGTCCCATTTGAG+GGG | + | chr4.1:2201828-2201847 | MS.gene06149:CDS | 40.0% | |
AACATCATATGACACAGCAC+TGG | - | chr4.1:2200325-2200344 | None:intergenic | 40.0% | |
AAGGTTATCAGCCATAGTAG+AGG | + | chr4.1:2199112-2199131 | MS.gene06149:CDS | 40.0% | |
ACATCATATGACACAGCACT+GGG | - | chr4.1:2200324-2200343 | None:intergenic | 40.0% | |
ACATGCAAAGTTATGTGGAG+AGG | + | chr4.1:2201799-2201818 | MS.gene06149:CDS | 40.0% | |
ACGATAAACTCATTCGTCGT+AGG | - | chr4.1:2202281-2202300 | None:intergenic | 40.0% | |
AGCAAAGAAAGCTTGACAGA+TGG | - | chr4.1:2201882-2201901 | None:intergenic | 40.0% | |
AGGAGGACTTGAACAAGAAA+TGG | + | chr4.1:2198890-2198909 | MS.gene06149:CDS | 40.0% | |
AGTCATACTTCACACTGTCA+GGG | - | chr4.1:2200740-2200759 | None:intergenic | 40.0% | |
ATTGTAGCCTGTCACAACAT+TGG | + | chr4.1:2199019-2199038 | MS.gene06149:intron | 40.0% | |
CAACAATTGTGTGGGCAATA+GGG | + | chr4.1:2201753-2201772 | MS.gene06149:CDS | 40.0% | |
CAACATTGGAACAATGTGAG+TGG | + | chr4.1:2199033-2199052 | MS.gene06149:CDS | 40.0% | |
CACCTAAAACAAACCAGACA+AGG | - | chr4.1:2201508-2201527 | None:intergenic | 40.0% | |
CAGTCCTCAGAAATCACTTA+AGG | + | chr4.1:2202628-2202647 | MS.gene06149:CDS | 40.0% | |
CATTGTTCCAATGTTGTGAC+AGG | - | chr4.1:2199029-2199048 | None:intergenic | 40.0% | |
CGGAAATTTCACCTCTACTA+TGG | - | chr4.1:2199126-2199145 | None:intergenic | 40.0% | |
GAAATGCTTGTCCCATTTGA+GGG | + | chr4.1:2201827-2201846 | MS.gene06149:CDS | 40.0% | |
GACATTTGTAGAGGTAGAAG+CGG | + | chr4.1:2200596-2200615 | MS.gene06149:CDS | 40.0% | |
GATAACTGTTGTGGAAGCAA+AGG | + | chr4.1:2202691-2202710 | MS.gene06149:CDS | 40.0% | |
GATCCCTTAAGTGATTTCTG+AGG | - | chr4.1:2202635-2202654 | None:intergenic | 40.0% | |
GCAAAGAAAGCTTGACAGAT+GGG | - | chr4.1:2201881-2201900 | None:intergenic | 40.0% | |
GCAATTCCTATTCTAACCTC+AGG | - | chr4.1:2200048-2200067 | None:intergenic | 40.0% | |
GGAACATGATTATACCACCT+TGG | + | chr4.1:2202061-2202080 | MS.gene06149:intron | 40.0% | |
GTGTAGATGCAAAGAGAAGA+AGG | - | chr4.1:2198761-2198780 | None:intergenic | 40.0% | |
GTTCCAAGAATGAATGAGCA+TGG | - | chr4.1:2200252-2200271 | None:intergenic | 40.0% | |
GTTGTGACACCAATACTAGA+TGG | + | chr4.1:2199991-2200010 | MS.gene06149:CDS | 40.0% | |
TAGTCATACTTCACACTGTC+AGG | - | chr4.1:2200741-2200760 | None:intergenic | 40.0% | |
TCAACAATTGTGTGGGCAAT+AGG | + | chr4.1:2201752-2201771 | MS.gene06149:CDS | 40.0% | |
TCTACACCTGAGGTTAGAAT+AGG | + | chr4.1:2200039-2200058 | MS.gene06149:CDS | 40.0% | |
TGAAATGCTTGTCCCATTTG+AGG | + | chr4.1:2201826-2201845 | MS.gene06149:CDS | 40.0% | |
TGACACTTTGGTAAAGACCA+TGG | + | chr4.1:2200389-2200408 | MS.gene06149:CDS | 40.0% | |
TGGCTTAGATGATTGTAGTG+GGG | - | chr4.1:2201144-2201163 | None:intergenic | 40.0% | |
TGTATGTCGATGAGAAGATG+AGG | + | chr4.1:2201714-2201733 | MS.gene06149:intron | 40.0% | |
TGTCGTGAAGTTTATAGGTG+AGG | - | chr4.1:2201369-2201388 | None:intergenic | 40.0% | |
TTACCAGCGGAAAATACTTG+AGG | + | chr4.1:2198870-2198889 | MS.gene06149:CDS | 40.0% | |
TTGACCATCTAATCCCTTGA+AGG | - | chr4.1:2199435-2199454 | None:intergenic | 40.0% | |
! | AAAGCTCTGATGTCATGTCA+AGG | + | chr4.1:2202089-2202108 | MS.gene06149:intron | 40.0% |
! | AATTTGGAAGGACTGGTACA+AGG | + | chr4.1:2203099-2203118 | MS.gene06149:CDS | 40.0% |
! | ACTTTCTAGGAGTTGCTTCA+AGG | + | chr4.1:2200509-2200528 | MS.gene06149:CDS | 40.0% |
! | ATAGGAATTGCCTTTGGAAG+CGG | + | chr4.1:2200057-2200076 | MS.gene06149:CDS | 40.0% |
! | ATTTGGAAGGACTGGTACAA+GGG | + | chr4.1:2203100-2203119 | MS.gene06149:CDS | 40.0% |
! | CCCAATCAAAACCCATTTTC+AGG | - | chr4.1:2199636-2199655 | None:intergenic | 40.0% |
! | CTTAAGTGATTTCTGAGGAC+TGG | - | chr4.1:2202630-2202649 | None:intergenic | 40.0% |
! | CTTTCTAGGAGTTGCTTCAA+GGG | + | chr4.1:2200510-2200529 | MS.gene06149:CDS | 40.0% |
! | GGGCAAGAGGATAACATTTT+TGG | + | chr4.1:2201449-2201468 | MS.gene06149:intron | 40.0% |
! | GTTGGCTTAGATGATTGTAG+TGG | - | chr4.1:2201146-2201165 | None:intergenic | 40.0% |
! | GTTTGCCTGCAGTTGATTTA+AGG | + | chr4.1:2200436-2200455 | MS.gene06149:CDS | 40.0% |
! | TTAAGGAAGTATGCTGTTGG+AGG | + | chr4.1:2200453-2200472 | MS.gene06149:CDS | 40.0% |
! | TTTCTAGGAGTTGCTTCAAG+GGG | + | chr4.1:2200511-2200530 | MS.gene06149:CDS | 40.0% |
!! | GCTTTATGGTGGATATAGCT+TGG | + | chr4.1:2201899-2201918 | MS.gene06149:intron | 40.0% |
!!! | CGGCATCGTGTTTTTAAAAC+TGG | + | chr4.1:2200948-2200967 | MS.gene06149:intron | 40.0% |
!!! | GAAGTGCTGGAATTTTCACT+TGG | + | chr4.1:2199388-2199407 | MS.gene06149:CDS | 40.0% |
!!! | GTTTTAAAAACACGATGCCG+TGG | - | chr4.1:2200948-2200967 | None:intergenic | 40.0% |
!!! | GTTTTGGTTCAACTCCAAGA+TGG | + | chr4.1:2200646-2200665 | MS.gene06149:CDS | 40.0% |
AAAGGATGGGGAAAAGCTGT+TGG | - | chr4.1:2201164-2201183 | None:intergenic | 45.0% | |
AATATGTACACCACCACCCA+TGG | + | chr4.1:2201187-2201206 | MS.gene06149:intron | 45.0% | |
AATGCTTGTCCCATTTGAGG+GGG | + | chr4.1:2201829-2201848 | MS.gene06149:CDS | 45.0% | |
AATTTGGGTGGAGAACCAAG+AGG | + | chr4.1:2203191-2203210 | MS.gene06149:CDS | 45.0% | |
ACTGGTACAAGGGTCAATCA+GGG | + | chr4.1:2203110-2203129 | MS.gene06149:CDS | 45.0% | |
AGAAGAAAACGTGAGCGACA+AGG | + | chr4.1:2200566-2200585 | MS.gene06149:CDS | 45.0% | |
AGAATGAATGAGCATGGGAG+AGG | - | chr4.1:2200246-2200265 | None:intergenic | 45.0% | |
AGCATACCTTTGATCCCTCT+TGG | - | chr4.1:2203209-2203228 | None:intergenic | 45.0% | |
ATGGTTGCTAAGCTTTCCGT+TGG | + | chr4.1:2199679-2199698 | MS.gene06149:CDS | 45.0% | |
ATTGCTCTGTTCTCGGTTAC+CGG | - | chr4.1:2201569-2201588 | None:intergenic | 45.0% | |
ATTTGGGTGGAGAACCAAGA+GGG | + | chr4.1:2203192-2203211 | MS.gene06149:CDS | 45.0% | |
ATTTGTAGAGGTAGAAGCGG+AGG | + | chr4.1:2200599-2200618 | MS.gene06149:CDS | 45.0% | |
CACAATTCTGGCAGTACCAA+CGG | - | chr4.1:2199698-2199717 | None:intergenic | 45.0% | |
CACTCTCAACTATTGTGCCA+CGG | + | chr4.1:2200928-2200947 | MS.gene06149:intron | 45.0% | |
CACTTTGGTAAAGACCATGG+TGG | + | chr4.1:2200392-2200411 | MS.gene06149:CDS | 45.0% | |
CAGAACTCACTCCTTCAAGT+GGG | - | chr4.1:2203146-2203165 | None:intergenic | 45.0% | |
CATCATATGACACAGCACTG+GGG | - | chr4.1:2200323-2200342 | None:intergenic | 45.0% | |
CCACATCATTGCTCTGTTCT+CGG | - | chr4.1:2201576-2201595 | None:intergenic | 45.0% | |
CTATAGGCATGTGTGACCAT+GGG | - | chr4.1:2201206-2201225 | None:intergenic | 45.0% | |
CTCCCATGCTCATTCATTCT+TGG | + | chr4.1:2200246-2200265 | MS.gene06149:intron | 45.0% | |
GGACTTGCAGACATTTGTAG+AGG | + | chr4.1:2200587-2200606 | MS.gene06149:CDS | 45.0% | |
GGCTTAGATGATTGTAGTGG+GGG | - | chr4.1:2201143-2201162 | None:intergenic | 45.0% | |
GGGAGAGGCAAAGAATGAAA+AGG | - | chr4.1:2200231-2200250 | None:intergenic | 45.0% | |
GTATCATTCCAGACAGCAGT+TGG | - | chr4.1:2202982-2203001 | None:intergenic | 45.0% | |
GTCATACTTCACACTGTCAG+GGG | - | chr4.1:2200739-2200758 | None:intergenic | 45.0% | |
TCATACTTCACACTGTCAGG+GGG | - | chr4.1:2200738-2200757 | None:intergenic | 45.0% | |
TCTATAGGCATGTGTGACCA+TGG | - | chr4.1:2201207-2201226 | None:intergenic | 45.0% | |
TGACAGCGACTCCTGAAAAT+GGG | + | chr4.1:2199622-2199641 | MS.gene06149:intron | 45.0% | |
TGCAGTATGGGAATTACCAG+CGG | + | chr4.1:2198857-2198876 | MS.gene06149:intron | 45.0% | |
TTCAAGGGGAGGCAACAAAA+TGG | + | chr4.1:2200525-2200544 | MS.gene06149:CDS | 45.0% | |
TTGACAGCGACTCCTGAAAA+TGG | + | chr4.1:2199621-2199640 | MS.gene06149:intron | 45.0% | |
TTGCAGTATGGAAAGGTGAG+AGG | + | chr4.1:2202761-2202780 | MS.gene06149:intron | 45.0% | |
! | AGATGATTGTAGTGGGGGTT+TGG | - | chr4.1:2201138-2201157 | None:intergenic | 45.0% |
! | ATGGCAACGACGAGTTTTTC+TGG | + | chr4.1:2201428-2201447 | MS.gene06149:intron | 45.0% |
! | CATCAGAGCTTTTGTGACCA+AGG | - | chr4.1:2202081-2202100 | None:intergenic | 45.0% |
! | CTGATTTGTCCCCCTCAAAT+GGG | - | chr4.1:2201841-2201860 | None:intergenic | 45.0% |
! | TAAAGACCATGGTGGAACCT+CGG | + | chr4.1:2200400-2200419 | MS.gene06149:CDS | 45.0% |
! | TAGGAATTGCCTTTGGAAGC+GGG | + | chr4.1:2200058-2200077 | MS.gene06149:CDS | 45.0% |
! | TATGGAAAGGTGAGAGGTAC+TGG | + | chr4.1:2202767-2202786 | MS.gene06149:intron | 45.0% |
! | TGGCAACGACGAGTTTTTCT+GGG | + | chr4.1:2201429-2201448 | MS.gene06149:intron | 45.0% |
! | TTTGAGTTAGTCGGTGAGTG+TGG | + | chr4.1:2199167-2199186 | MS.gene06149:intron | 45.0% |
!! | GACGACATTTTGACAATCGC+TGG | - | chr4.1:2201621-2201640 | None:intergenic | 45.0% |
AAGAGCGGAAATGTCTCTGC+GGG | - | chr4.1:2202441-2202460 | None:intergenic | 50.0% | |
AAGGGTCAATCAGGGACGTA+TGG | + | chr4.1:2203118-2203137 | MS.gene06149:CDS | 50.0% | |
AATCCCTTGAAGGCCCAAAC+TGG | - | chr4.1:2199425-2199444 | None:intergenic | 50.0% | |
ACAGCAGTTGGAGTAGTAGG+AGG | - | chr4.1:2202970-2202989 | None:intergenic | 50.0% | |
AGAAACACCAGGCAACTCAG+TGG | - | chr4.1:2200097-2200116 | None:intergenic | 50.0% | |
AGCACTTCAACCCTTTCCTG+CGG | - | chr4.1:2199376-2199395 | None:intergenic | 50.0% | |
AGTTGCCTGGTGTTTCTCCT+TGG | + | chr4.1:2200100-2200119 | MS.gene06149:CDS | 50.0% | |
AGTTGGTTGTGGGTACGAGA+TGG | - | chr4.1:2201106-2201125 | None:intergenic | 50.0% | |
ATCCCTTGAAGGCCCAAACT+GGG | - | chr4.1:2199424-2199443 | None:intergenic | 50.0% | |
ATGGTCAACCTCTGGTGATC+AGG | + | chr4.1:2199447-2199466 | MS.gene06149:CDS | 50.0% | |
CAAGAGCGGAAATGTCTCTG+CGG | - | chr4.1:2202442-2202461 | None:intergenic | 50.0% | |
CAGACAGCAGTTGGAGTAGT+AGG | - | chr4.1:2202973-2202992 | None:intergenic | 50.0% | |
CATACTTCACACTGTCAGGG+GGG | - | chr4.1:2200737-2200756 | None:intergenic | 50.0% | |
CCACTTGAAGGAGTGAGTTC+TGG | + | chr4.1:2203144-2203163 | MS.gene06149:CDS | 50.0% | |
CCAGAACTCACTCCTTCAAG+TGG | - | chr4.1:2203147-2203166 | None:intergenic | 50.0% | |
CCAGCGGAAAATACTTGAGG+AGG | + | chr4.1:2198873-2198892 | MS.gene06149:CDS | 50.0% | |
CCGAGAACAGAGCAATGATG+TGG | + | chr4.1:2201573-2201592 | MS.gene06149:intron | 50.0% | |
CGATGAGAAGATGAGGCATG+TGG | + | chr4.1:2201721-2201740 | MS.gene06149:intron | 50.0% | |
CTACTACTCCAACTGCTGTC+TGG | + | chr4.1:2202971-2202990 | MS.gene06149:CDS | 50.0% | |
CTGCAGGCAAACTGAAACAG+CGG | - | chr4.1:2200428-2200447 | None:intergenic | 50.0% | |
GACGTATGGATCCCACTTGA+AGG | + | chr4.1:2203132-2203151 | MS.gene06149:CDS | 50.0% | |
GACTGGTACAAGGGTCAATC+AGG | + | chr4.1:2203109-2203128 | MS.gene06149:CDS | 50.0% | |
GGAGAACCAAGAGGGATCAA+AGG | + | chr4.1:2203200-2203219 | MS.gene06149:CDS | 50.0% | |
GGGATTAGATGGTCAACCTC+TGG | + | chr4.1:2199439-2199458 | MS.gene06149:CDS | 50.0% | |
TGAGAAGATGAGGCATGTGG+AGG | + | chr4.1:2201724-2201743 | MS.gene06149:intron | 50.0% | |
TGGGCCTTCAAGGGATTAGA+TGG | + | chr4.1:2199428-2199447 | MS.gene06149:CDS | 50.0% | |
! | AGGAATTGCCTTTGGAAGCG+GGG | + | chr4.1:2200059-2200078 | MS.gene06149:CDS | 50.0% |
! | AGGAGAACAGGTGTGCGTTT+TGG | + | chr4.1:2200630-2200649 | MS.gene06149:CDS | 50.0% |
! | ATTGTAGTGGGGGTTTGGCT+AGG | - | chr4.1:2201133-2201152 | None:intergenic | 50.0% |
! | ATTTCTGAGGACTGGCATGG+AGG | - | chr4.1:2202622-2202641 | None:intergenic | 50.0% |
! | CAGAGCTTTTGTGACCAAGG+TGG | - | chr4.1:2202078-2202097 | None:intergenic | 50.0% |
! | CCTCCTCAAGTATTTTCCGC+TGG | - | chr4.1:2198876-2198895 | None:intergenic | 50.0% |
! | GACGAGTTTTTCTGGGCAAG+AGG | + | chr4.1:2201436-2201455 | MS.gene06149:intron | 50.0% |
! | GCTAGGATGGAGTTGGTTGT+GGG | - | chr4.1:2201116-2201135 | None:intergenic | 50.0% |
! | GTGATTTCTGAGGACTGGCA+TGG | - | chr4.1:2202625-2202644 | None:intergenic | 50.0% |
!! | GCTGATTTGTCCCCCTCAAA+TGG | - | chr4.1:2201842-2201861 | None:intergenic | 50.0% |
ACCAGCCAAGGAGAAACACC+AGG | - | chr4.1:2200108-2200127 | None:intergenic | 55.0% | |
AGAGCGGAAATGTCTCTGCG+GGG | - | chr4.1:2202440-2202459 | None:intergenic | 55.0% | |
CAATCAGCCACTGAGTTGCC+TGG | + | chr4.1:2200087-2200106 | MS.gene06149:CDS | 55.0% | |
CAGGCAACTCAGTGGCTGAT+TGG | - | chr4.1:2200089-2200108 | None:intergenic | 55.0% | |
CTAGGAGTTGCTTCAAGGGG+AGG | + | chr4.1:2200514-2200533 | MS.gene06149:CDS | 55.0% | |
CTCCCAGTTTGGGCCTTCAA+GGG | + | chr4.1:2199419-2199438 | MS.gene06149:CDS | 55.0% | |
CTTGAAGGCCCAAACTGGGA+GGG | - | chr4.1:2199420-2199439 | None:intergenic | 55.0% | |
GAGGAGCTGACAAGGAGAAC+AGG | + | chr4.1:2200618-2200637 | MS.gene06149:CDS | 55.0% | |
GCAGGAAAGGGTTGAAGTGC+TGG | + | chr4.1:2199375-2199394 | MS.gene06149:intron | 55.0% | |
GCAGTTGGAGTAGTAGGAGG+AGG | - | chr4.1:2202967-2202986 | None:intergenic | 55.0% | |
GGGTTTGGCTAGGATGGAGT+TGG | - | chr4.1:2201123-2201142 | None:intergenic | 55.0% | |
GTTGTGGGTACGAGATGGTG+TGG | - | chr4.1:2201101-2201120 | None:intergenic | 55.0% | |
TAGAAGCGGAGGAGCTGACA+AGG | + | chr4.1:2200610-2200629 | MS.gene06149:CDS | 55.0% | |
TAGGCATGTGTGACCATGGG+TGG | - | chr4.1:2201203-2201222 | None:intergenic | 55.0% | |
TAGTGGGGGTTTGGCTAGGA+TGG | - | chr4.1:2201129-2201148 | None:intergenic | 55.0% | |
TGAGGGGGACAAATCAGCAG+AGG | + | chr4.1:2201844-2201863 | MS.gene06149:CDS | 55.0% | |
TGGGCAATAGGGCCTGATTC+TGG | + | chr4.1:2201764-2201783 | MS.gene06149:CDS | 55.0% | |
! | GGAATTGCCTTTGGAAGCGG+GGG | + | chr4.1:2200060-2200079 | MS.gene06149:CDS | 55.0% |
! | GGCTAGGATGGAGTTGGTTG+TGG | - | chr4.1:2201117-2201136 | None:intergenic | 55.0% |
AAACTGAAACAGCGGCGCCG+AGG | - | chr4.1:2200420-2200439 | None:intergenic | 60.0% | |
CCTCCCAGTTTGGGCCTTCA+AGG | + | chr4.1:2199418-2199437 | MS.gene06149:CDS | 60.0% | |
CCTTGAAGGCCCAAACTGGG+AGG | - | chr4.1:2199421-2199440 | None:intergenic | 60.0% | |
GCATGTGTGACCATGGGTGG+TGG | - | chr4.1:2201200-2201219 | None:intergenic | 60.0% | |
GCCTGGTGTTTCTCCTTGGC+TGG | + | chr4.1:2200104-2200123 | MS.gene06149:CDS | 60.0% | |
GGATCACGCCCTCCCAGTTT+GGG | + | chr4.1:2199409-2199428 | MS.gene06149:CDS | 60.0% | |
TGGATCACGCCCTCCCAGTT+TGG | + | chr4.1:2199408-2199427 | MS.gene06149:CDS | 60.0% | |
TTGGCTTCCCCCGCTTCCAA+AGG | - | chr4.1:2200070-2200089 | None:intergenic | 60.0% | |
! | CTGAGGACTGGCATGGAGGT+TGG | - | chr4.1:2202618-2202637 | None:intergenic | 60.0% |
! | GCGGCGCCGAGGTTCCACCA+TGG | - | chr4.1:2200409-2200428 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 2198576 | 2203257 | 2198576 | ID=MS.gene06149 |
chr4.1 | mRNA | 2198576 | 2203257 | 2198576 | ID=MS.gene06149.t1;Parent=MS.gene06149 |
chr4.1 | exon | 2198576 | 2198782 | 2198576 | ID=MS.gene06149.t1.exon1;Parent=MS.gene06149.t1 |
chr4.1 | CDS | 2198576 | 2198782 | 2198576 | ID=cds.MS.gene06149.t1;Parent=MS.gene06149.t1 |
chr4.1 | exon | 2198862 | 2198936 | 2198862 | ID=MS.gene06149.t1.exon2;Parent=MS.gene06149.t1 |
chr4.1 | CDS | 2198862 | 2198936 | 2198862 | ID=cds.MS.gene06149.t1;Parent=MS.gene06149.t1 |
chr4.1 | exon | 2199026 | 2199133 | 2199026 | ID=MS.gene06149.t1.exon3;Parent=MS.gene06149.t1 |
chr4.1 | CDS | 2199026 | 2199133 | 2199026 | ID=cds.MS.gene06149.t1;Parent=MS.gene06149.t1 |
chr4.1 | exon | 2199232 | 2199264 | 2199232 | ID=MS.gene06149.t1.exon4;Parent=MS.gene06149.t1 |
chr4.1 | CDS | 2199232 | 2199264 | 2199232 | ID=cds.MS.gene06149.t1;Parent=MS.gene06149.t1 |
chr4.1 | exon | 2199379 | 2199468 | 2199379 | ID=MS.gene06149.t1.exon5;Parent=MS.gene06149.t1 |
chr4.1 | CDS | 2199379 | 2199468 | 2199379 | ID=cds.MS.gene06149.t1;Parent=MS.gene06149.t1 |
chr4.1 | exon | 2199628 | 2199744 | 2199628 | ID=MS.gene06149.t1.exon6;Parent=MS.gene06149.t1 |
chr4.1 | CDS | 2199628 | 2199744 | 2199628 | ID=cds.MS.gene06149.t1;Parent=MS.gene06149.t1 |
chr4.1 | exon | 2199988 | 2200125 | 2199988 | ID=MS.gene06149.t1.exon7;Parent=MS.gene06149.t1 |
chr4.1 | CDS | 2199988 | 2200125 | 2199988 | ID=cds.MS.gene06149.t1;Parent=MS.gene06149.t1 |
chr4.1 | exon | 2200375 | 2200782 | 2200375 | ID=MS.gene06149.t1.exon8;Parent=MS.gene06149.t1 |
chr4.1 | CDS | 2200375 | 2200782 | 2200375 | ID=cds.MS.gene06149.t1;Parent=MS.gene06149.t1 |
chr4.1 | exon | 2201731 | 2201865 | 2201731 | ID=MS.gene06149.t1.exon9;Parent=MS.gene06149.t1 |
chr4.1 | CDS | 2201731 | 2201865 | 2201731 | ID=cds.MS.gene06149.t1;Parent=MS.gene06149.t1 |
chr4.1 | exon | 2202557 | 2202775 | 2202557 | ID=MS.gene06149.t1.exon10;Parent=MS.gene06149.t1 |
chr4.1 | CDS | 2202557 | 2202775 | 2202557 | ID=cds.MS.gene06149.t1;Parent=MS.gene06149.t1 |
chr4.1 | exon | 2202940 | 2203257 | 2202940 | ID=MS.gene06149.t1.exon11;Parent=MS.gene06149.t1 |
chr4.1 | CDS | 2202940 | 2203257 | 2202940 | ID=cds.MS.gene06149.t1;Parent=MS.gene06149.t1 |
Gene Sequence |
Protein sequence |