AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene05842


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05842.t1 MTR_8g104330 96.041 682 27 0 1 682 69 750 0.0 1353
MS.gene05842.t1 MTR_8g104330 96.041 682 27 0 1 682 69 750 0.0 1350
MS.gene05842.t1 MTR_8g104330 96.041 682 27 0 1 682 16 697 0.0 1350
MS.gene05842.t1 MTR_6g084400 75.217 690 158 6 1 682 67 751 0.0 1032
MS.gene05842.t1 MTR_2g072180 31.034 116 75 2 544 655 195 309 8.22e-13 72.0
MS.gene05842.t1 MTR_2g072180 31.034 116 75 2 544 655 285 399 8.30e-13 72.4
MS.gene05842.t1 MTR_4g115660 22.117 529 336 23 31 524 69 556 7.28e-12 68.9
MS.gene05842.t1 MTR_4g066150 25.296 253 148 8 412 628 42 289 9.74e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05842.t1 AT3G18370 58.929 672 260 6 1 666 66 727 0.0 770
MS.gene05842.t1 AT3G18370 27.143 210 122 5 354 557 571 755 5.91e-11 66.2
MS.gene05842.t1 AT1G05500 27.273 297 171 10 402 654 110 405 4.47e-20 94.0
MS.gene05842.t1 AT1G05500 27.273 297 171 10 402 654 254 549 1.03e-19 94.0
MS.gene05842.t1 AT1G05500 21.415 523 341 17 31 524 69 550 1.89e-13 73.9
MS.gene05842.t1 AT3G14590 30.328 122 80 2 550 667 201 321 1.57e-12 71.2
MS.gene05842.t1 AT3G14590 30.328 122 80 2 550 667 258 378 1.80e-12 71.2
MS.gene05842.t1 AT3G14590 30.328 122 80 2 550 667 289 409 1.81e-12 71.2
MS.gene05842.t1 AT3G14590 30.328 122 80 2 550 667 203 323 1.82e-12 71.2
MS.gene05842.t1 AT3G14590 30.328 122 80 2 550 667 244 364 1.92e-12 70.9
MS.gene05842.t1 AT1G53590 32.727 110 69 2 550 655 288 396 3.84e-12 70.1

Find 185 sgRNAs with CRISPR-Local

Find 382 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACTTAAAATAGAAGCAATT+TGG 0.181599 4.4:-2440165 MS.gene05842:CDS
GTTTGCCTGCAGTTGATTTA+AGG 0.188371 4.4:-2442904 MS.gene05842:CDS
GATTAACAGTCTTCATATTA+AGG 0.202883 4.4:-2443623 MS.gene05842:CDS
AAGCTTAGGATTAAAATAAT+TGG 0.210272 4.4:+2444256 None:intergenic
ATATATGTTTCAGTGATTTC+TGG 0.224641 4.4:-2442860 MS.gene05842:CDS
TTGACAGCGACTCCTGAAAA+TGG 0.243030 4.4:-2443719 MS.gene05842:intron
CCTAGCATCTTGTGAAATTA+AGG 0.272929 4.4:-2442579 MS.gene05842:intron
GATTGTCTTGTTTGAATCTC+TGG 0.272946 4.4:+2439446 None:intergenic
ATGGGATACGACATTTAATA+TGG 0.276237 4.4:-2442675 MS.gene05842:CDS
TTTCTGGAAACAAACTTTCT+AGG 0.288787 4.4:-2442844 MS.gene05842:CDS
CACTAAAGCATTTCACAATT+AGG 0.290537 4.4:+2440305 None:intergenic
CCTCCCAGTTTGGGCCTTCA+AGG 0.291000 4.4:-2443922 MS.gene05842:CDS
TGGTAGTGCACATGTAAATT+TGG 0.295602 4.4:-2440257 MS.gene05842:CDS
TCAACAATTGTGTGGGCAAT+AGG 0.296961 4.4:-2441588 MS.gene05842:CDS
TGGATCACGCCCTCCCAGTT+TGG 0.307725 4.4:-2443932 MS.gene05842:CDS
ATCTATTGTTGTCACAAATA+TGG 0.313272 4.4:-2444280 MS.gene05842:CDS
CTTATTGCTGCTGATCTTAG+AGG 0.322823 4.4:-2439948 MS.gene05842:CDS
GGATCACGCCCTCCCAGTTT+GGG 0.338838 4.4:-2443931 MS.gene05842:CDS
CTTGATGCAAAAGACAGATT+TGG 0.340577 4.4:-2440624 MS.gene05842:CDS
TGGGCAATAGGGCCTGATTC+TGG 0.355523 4.4:-2441576 MS.gene05842:CDS
CCATACTGCAACTTAATGTA+AGG 0.356510 4.4:+2440591 None:intergenic
AAGACTGTTAATCACAATTC+TGG 0.357434 4.4:+2443633 None:intergenic
GACTGGTACAAGGGTCAATC+AGG 0.359705 4.4:-2440231 MS.gene05842:CDS
CGGAAATTTCACCTCTACTA+TGG 0.360153 4.4:+2444217 None:intergenic
ACTTAAAATAGAAGCAATTT+GGG 0.369605 4.4:-2440164 MS.gene05842:CDS
GCCTGGTGTTTCTCCTTGGC+TGG 0.370816 4.4:-2443236 MS.gene05842:intron
AGGAGAACAGGTGTGCGTTT+TGG 0.372091 4.4:-2442710 MS.gene05842:CDS
TGGGCCTTCAAGGGATTAGA+TGG 0.373329 4.4:-2443912 MS.gene05842:CDS
CCTTACATTAAGTTGCAGTA+TGG 0.376835 4.4:-2440591 MS.gene05842:CDS
AATCCCTTGAAGGCCCAAAC+TGG 0.381812 4.4:+2443918 None:intergenic
GGTCCTTTACATGCAATGTC+AGG 0.385025 4.4:+2439612 None:intergenic
ATCTTACCTGGCTAGGAATC+TGG 0.389714 4.4:+2439390 None:intergenic
TTTGCTATTACACCAGAATC+AGG 0.393362 4.4:+2441564 None:intergenic
TAGTCATACTTCACACTGTC+AGG 0.393443 4.4:+2442602 None:intergenic
ATGGTCAACCTCTGGTGATC+AGG 0.399087 4.4:-2443893 MS.gene05842:intron
AGGAGGACTTGAACAAGAAA+TGG 0.399481 4.4:-2444450 MS.gene05842:CDS
GTCAAAGAAGGTACAGAGTC+TGG 0.400907 4.4:+2439422 None:intergenic
ATTAACAGTCTTCATATTAA+GGG 0.404294 4.4:-2443622 MS.gene05842:CDS
CAGTCCTCAGAAATCACTTA+AGG 0.407068 4.4:-2440712 MS.gene05842:CDS
CAGACAGCAGTTGGAGTAGT+AGG 0.407160 4.4:+2440370 None:intergenic
TCAATACTCACTATAAATCT+TGG 0.408027 4.4:+2444087 None:intergenic
CCACTTGAAGGAGTGAGTTC+TGG 0.410382 4.4:-2440196 MS.gene05842:CDS
GCAGGAAAGGGTTGAAGTGC+TGG 0.418455 4.4:-2443965 MS.gene05842:intron
AGTTGCCTGGTGTTTCTCCT+TGG 0.424831 4.4:-2443240 MS.gene05842:CDS
CTACTACTCCAACTGCTGTC+TGG 0.428303 4.4:-2440369 MS.gene05842:CDS
GATAACCTTGTTGAAAGCTT+AGG 0.429137 4.4:+2444242 None:intergenic
TTCAAGGGGAGGCAACAAAA+TGG 0.429566 4.4:-2442815 MS.gene05842:CDS
CAACAATTGTGTGGGCAATA+GGG 0.436310 4.4:-2441587 MS.gene05842:CDS
AGCATACCTTTGATCCCTCT+TGG 0.438342 4.4:+2440134 None:intergenic
CTGACGTCTGGTTCGGAGGA+AGG 0.439433 4.4:+2439534 None:intergenic
CACTTGTCTGACGTCTGGTT+CGG 0.442433 4.4:+2439527 None:intergenic
CTCCCAGTTTGGGCCTTCAA+GGG 0.443301 4.4:-2443921 MS.gene05842:CDS
CAGGCAACTCAGTGGCTGAT+TGG 0.445771 4.4:+2443254 None:intergenic
ACTTTCTAGGAGTTGCTTCA+AGG 0.450247 4.4:-2442831 MS.gene05842:CDS
GTTAGAATAGGAATTGCCTT+TGG 0.450508 4.4:-2443289 MS.gene05842:CDS
CCATAGTTTACCCTCACAAA+AGG 0.451988 4.4:+2439915 None:intergenic
GAAATGCTTGTCCCATTTGA+GGG 0.462374 4.4:-2441513 MS.gene05842:CDS
TAGGAATTGCCTTTGGAAGC+GGG 0.463344 4.4:-2443282 MS.gene05842:CDS
ATGTGGGTAGTAAAGCATTA+TGG 0.465652 4.4:+2439591 None:intergenic
TCCATCATCTAGGAACTCTA+AGG 0.471854 4.4:+2439640 None:intergenic
GAGGAGCTGACAAGGAGAAC+AGG 0.474710 4.4:-2442722 MS.gene05842:CDS
TGAAATGCTTGTCCCATTTG+AGG 0.476657 4.4:-2441514 MS.gene05842:CDS
TGACAGCGACTCCTGAAAAT+GGG 0.479324 4.4:-2443718 MS.gene05842:intron
ACCTTAGAGTTCCTAGATGA+TGG 0.483274 4.4:-2439641 MS.gene05842:CDS
CAAAACTGTCAACCCTCGTT+GGG 0.484234 4.4:-2439669 MS.gene05842:CDS
ATTACACCAGATTCCTAGCC+AGG 0.486968 4.4:-2439396 None:intergenic
CAAGATAATCTTACCTGGCT+AGG 0.489913 4.4:+2439383 None:intergenic
CTGAGGACTGGCATGGAGGT+TGG 0.491010 4.4:+2440725 None:intergenic
GCAAAACATGCAAAGTTATG+TGG 0.493121 4.4:-2441546 MS.gene05842:CDS
TCTACACCTGAGGTTAGAAT+AGG 0.496065 4.4:-2443301 MS.gene05842:CDS
CTGCAGGCAAACTGAAACAG+CGG 0.498690 4.4:+2442915 None:intergenic
GATTTAAGGAAGTATGCTGT+TGG 0.500240 4.4:-2442890 MS.gene05842:CDS
CTTAAGTGATTTCTGAGGAC+TGG 0.500924 4.4:+2440713 None:intergenic
ATAGGAATTGCCTTTGGAAG+CGG 0.505307 4.4:-2443283 MS.gene05842:CDS
CAACAAAATGGCACAAGTAA+TGG 0.505516 4.4:-2442803 MS.gene05842:CDS
TTGACCATCTAATCCCTTGA+AGG 0.505697 4.4:+2443908 None:intergenic
CATTGTTCCAATGTTGTGAC+AGG 0.505847 4.4:+2444314 None:intergenic
GTATCCACTTGTCTGACGTC+TGG 0.509251 4.4:+2439522 None:intergenic
CAATCAGCCACTGAGTTGCC+TGG 0.509829 4.4:-2443253 MS.gene05842:CDS
GACGTATGGATCCCACTTGA+AGG 0.510497 4.4:-2440208 MS.gene05842:CDS
CTTTCTAGGAGTTGCTTCAA+GGG 0.512264 4.4:-2442830 MS.gene05842:CDS
TTTGAGGTAGATGAGAATAG+TGG 0.517481 4.4:-2440337 MS.gene05842:CDS
GCAATTCCTATTCTAACCTC+AGG 0.518982 4.4:+2443295 None:intergenic
ATGGTTGCTAAGCTTTCCGT+TGG 0.521021 4.4:-2443661 MS.gene05842:CDS
TCCCCTGACATTGCATGTAA+AGG 0.521441 4.4:-2439615 MS.gene05842:CDS
TTAAATGTCGTATCCCATCT+TGG 0.523652 4.4:+2442680 None:intergenic
CTAGGAGTTGCTTCAAGGGG+AGG 0.523911 4.4:-2442826 MS.gene05842:CDS
CATCTAGGAACTCTAAGGTC+TGG 0.524885 4.4:+2439645 None:intergenic
GGGATTAGATGGTCAACCTC+TGG 0.525778 4.4:-2443901 MS.gene05842:CDS
TCAGGGGACTTCCATCATCT+AGG 0.527254 4.4:+2439630 None:intergenic
TTACTACCCACATCAAGTAT+AGG 0.528681 4.4:-2439581 MS.gene05842:CDS
GTCCTTTACATGCAATGTCA+GGG 0.529283 4.4:+2439613 None:intergenic
AGTCCTCAGAAATCACTTAA+GGG 0.530108 4.4:-2440711 MS.gene05842:CDS
TGGTGTAATTTAGTCAAAGA+AGG 0.534973 4.4:+2439410 None:intergenic
AAGGGTCAATCAGGGACGTA+TGG 0.535171 4.4:-2440222 MS.gene05842:CDS
ACATTCACCTATACTTGATG+TGG 0.539889 4.4:+2439574 None:intergenic
TGAGAATTGTAGTGAAAGAG+TGG 0.540272 4.4:-2440776 MS.gene05842:CDS
ACATGTAAATTTGGAAGGAC+TGG 0.542178 4.4:-2440248 MS.gene05842:CDS
AATTTGGAAGGACTGGTACA+AGG 0.542219 4.4:-2440241 MS.gene05842:CDS
GTTGTGACACCAATACTAGA+TGG 0.544685 4.4:-2443349 MS.gene05842:CDS
CACAATTCTGGCAGTACCAA+CGG 0.547971 4.4:+2443645 None:intergenic
CCTTAATTTCACAAGATGCT+AGG 0.548400 4.4:+2442579 None:intergenic
AACTTGTTCTTATTGAAGCG+AGG 0.551264 4.4:-2439974 MS.gene05842:CDS
ATCCCTTGAAGGCCCAAACT+GGG 0.552497 4.4:+2443919 None:intergenic
TAGAAGCGGAGGAGCTGACA+AGG 0.553685 4.4:-2442730 MS.gene05842:CDS
TACTTCCTTAAATCAACTGC+AGG 0.555104 4.4:+2442899 None:intergenic
CATCGGGCATGACGAATGGT+TGG 0.555212 4.4:-2440001 MS.gene05842:CDS
ATTTGGAAGGACTGGTACAA+GGG 0.556965 4.4:-2440240 MS.gene05842:CDS
GATAACTGTTGTGGAAGCAA+AGG 0.557052 4.4:-2440649 MS.gene05842:CDS
GAAACTTAAGATAACTGTTG+TGG 0.557431 4.4:-2440658 MS.gene05842:CDS
TTAAGGAAGTATGCTGTTGG+AGG 0.563370 4.4:-2442887 MS.gene05842:CDS
GCAGTTGGAGTAGTAGGAGG+AGG 0.566786 4.4:+2440376 None:intergenic
GACATTTGTAGAGGTAGAAG+CGG 0.571411 4.4:-2442744 MS.gene05842:CDS
ATTGTAGCCTGTCACAACAT+TGG 0.572141 4.4:-2444321 MS.gene05842:intron
TGGACACAGAGTCCACCATC+GGG 0.572536 4.4:-2440017 MS.gene05842:intron
CATTAAGTTGCAGTATGGAA+AGG 0.575253 4.4:-2440586 MS.gene05842:intron
CCACCATCGGGCATGACGAA+TGG 0.575275 4.4:-2440005 MS.gene05842:CDS
TTGTCTGACGTCTGGTTCGG+AGG 0.575753 4.4:+2439530 None:intergenic
CATACTGCAACTTAATGTAA+GGG 0.576632 4.4:+2440592 None:intergenic
GTATCATTCCAGACAGCAGT+TGG 0.577863 4.4:+2440361 None:intergenic
GTGATTTCTGAGGACTGGCA+TGG 0.577904 4.4:+2440718 None:intergenic
CCTCTCCAAGGGGTGAAAAG+TGG 0.578595 4.4:-2439500 MS.gene05842:CDS
TTCATTTGTATCTACACCTG+AGG 0.578623 4.4:-2443311 MS.gene05842:CDS
CCAGAACTCACTCCTTCAAG+TGG 0.579493 4.4:+2440196 None:intergenic
TTATTGCTGCTGATCTTAGA+GGG 0.581530 4.4:-2439947 MS.gene05842:CDS
ACTTGTTCTTATTGAAGCGA+GGG 0.585320 4.4:-2439973 MS.gene05842:CDS
ACAAAACTGTCAACCCTCGT+TGG 0.587051 4.4:-2439670 MS.gene05842:CDS
CTTGAAGGCCCAAACTGGGA+GGG 0.587914 4.4:+2443923 None:intergenic
GGAATTGCCTTTGGAAGCGG+GGG 0.588283 4.4:-2443280 MS.gene05842:CDS
CAACCATTCGTCATGCCCGA+TGG 0.589961 4.4:+2440002 None:intergenic
CGAACCAGACGTCAGACAAG+TGG 0.590076 4.4:-2439526 MS.gene05842:CDS
ATTTGTAGAGGTAGAAGCGG+AGG 0.594686 4.4:-2442741 MS.gene05842:CDS
TAAAATAGAAGCAATTTGGG+TGG 0.594996 4.4:-2440161 MS.gene05842:CDS
AGGAATTGCCTTTGGAAGCG+GGG 0.597693 4.4:-2443281 MS.gene05842:CDS
ACAAGTGGATACCTCTCCAA+GGG 0.598171 4.4:-2439511 MS.gene05842:CDS
CCATTCGTCATGCCCGATGG+TGG 0.598760 4.4:+2440005 None:intergenic
AAAGAGTGGCAATTCTCTGA+TGG 0.601133 4.4:-2440762 MS.gene05842:CDS
ATGGACACAGAGTCCACCAT+CGG 0.603021 4.4:-2440018 MS.gene05842:intron
GGAGAACCAAGAGGGATCAA+AGG 0.603156 4.4:-2440140 MS.gene05842:intron
TAATTTGAACATACCAGCCA+AGG 0.606696 4.4:+2443223 None:intergenic
AAATGCTTGTCCCATTTGAG+GGG 0.608513 4.4:-2441512 MS.gene05842:CDS
AAACTGAAACAGCGGCGCCG+AGG 0.611310 4.4:+2442923 None:intergenic
ACAGCAGTTGGAGTAGTAGG+AGG 0.613903 4.4:+2440373 None:intergenic
TTTCTAGGAGTTGCTTCAAG+GGG 0.619070 4.4:-2442829 MS.gene05842:CDS
ACATGCAAAGTTATGTGGAG+AGG 0.622013 4.4:-2441541 MS.gene05842:CDS
AGTGCACATGTAAATTTGGA+AGG 0.622106 4.4:-2440253 MS.gene05842:CDS
AGTCATACTTCACACTGTCA+GGG 0.623937 4.4:+2442603 None:intergenic
TCGTATCATAGTCAATACTT+CGG 0.625393 4.4:-2444425 MS.gene05842:intron
TAAAGACCATGGTGGAACCT+CGG 0.628622 4.4:-2442940 MS.gene05842:CDS
GATCCCTTAAGTGATTTCTG+AGG 0.629927 4.4:+2440708 None:intergenic
GACAAGTGGATACCTCTCCA+AGG 0.630168 4.4:-2439512 MS.gene05842:CDS
AATGCTTGTCCCATTTGAGG+GGG 0.631151 4.4:-2441511 MS.gene05842:CDS
GGACTTGCAGACATTTGTAG+AGG 0.638975 4.4:-2442753 MS.gene05842:CDS
ACTGGTACAAGGGTCAATCA+GGG 0.643146 4.4:-2440230 MS.gene05842:CDS
CCTTGAAGGCCCAAACTGGG+AGG 0.643279 4.4:+2443922 None:intergenic
TGCAGTATGGGAATTACCAG+CGG 0.644594 4.4:-2444483 None:intergenic
GTCATACTTCACACTGTCAG+GGG 0.645119 4.4:+2442604 None:intergenic
CATTCACCTATACTTGATGT+GGG 0.646006 4.4:+2439575 None:intergenic
CCAGCGGAAAATACTTGAGG+AGG 0.649319 4.4:-2444467 MS.gene05842:CDS
ACCAGCCAAGGAGAAACACC+AGG 0.651021 4.4:+2443235 None:intergenic
TGACACTTTGGTAAAGACCA+TGG 0.652545 4.4:-2442951 MS.gene05842:CDS
CTAAGGTCTGGTCCCAACGA+GGG 0.653594 4.4:+2439657 None:intergenic
TCATACTTCACACTGTCAGG+GGG 0.655219 4.4:+2442605 None:intergenic
ATTTGGGTGGAGAACCAAGA+GGG 0.655601 4.4:-2440148 MS.gene05842:CDS
AGAAGAAAACGTGAGCGACA+AGG 0.657017 4.4:-2442774 MS.gene05842:CDS
GGATGATTCAACAATTGTGT+GGG 0.659331 4.4:-2441595 MS.gene05842:CDS
AAGGTTATCAGCCATAGTAG+AGG 0.659514 4.4:-2444228 MS.gene05842:intron
TTACCAGCGGAAAATACTTG+AGG 0.661991 4.4:-2444470 MS.gene05842:CDS
TCCTTTACATGCAATGTCAG+GGG 0.664800 4.4:+2439614 None:intergenic
CAGAACTCACTCCTTCAAGT+GGG 0.666922 4.4:+2440197 None:intergenic
AAATAAAACCTGATCACCAG+AGG 0.670333 4.4:+2443885 None:intergenic
AGGATGATTCAACAATTGTG+TGG 0.671943 4.4:-2441596 MS.gene05842:CDS
AAACTTAAAGAAAAGAACAA+AGG 0.675630 4.4:-2439892 MS.gene05842:intron
CGATGAGAAGATGAGGCATG+TGG 0.684411 4.4:-2441619 MS.gene05842:intron
TGAGAAGATGAGGCATGTGG+AGG 0.692283 4.4:-2441616 MS.gene05842:intron
TCTAAGGTCTGGTCCCAACG+AGG 0.697996 4.4:+2439656 None:intergenic
CACTTTGGTAAAGACCATGG+TGG 0.701388 4.4:-2442948 MS.gene05842:CDS
TTAATCCTAAGCTTTCAACA+AGG 0.704753 4.4:-2444247 MS.gene05842:CDS
CATACTTCACACTGTCAGGG+GGG 0.713851 4.4:+2442606 None:intergenic
GCGGCGCCGAGGTTCCACCA+TGG 0.714667 4.4:+2442934 None:intergenic
CAACATTGGAACAATGTGAG+TGG 0.720711 4.4:-2444307 MS.gene05842:CDS
CAAGTGGATACCTCTCCAAG+GGG 0.733533 4.4:-2439510 MS.gene05842:CDS
ATTTCTGAGGACTGGCATGG+AGG 0.740443 4.4:+2440721 None:intergenic
AGAAACACCAGGCAACTCAG+TGG 0.743799 4.4:+2443246 None:intergenic
AATTTGGGTGGAGAACCAAG+AGG 0.782070 4.4:-2440149 MS.gene05842:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAATTAAAAAAAGTTAAAA+TGG + chr4.4:2443063-2443082 None:intergenic 10.0%
!! GATTATATAATCATTTAATA+TGG - chr4.4:2442716-2442735 MS.gene05842:CDS 10.0%
!!! ATTTTAATATAGAATTCTAT+TGG - chr4.4:2440131-2440150 MS.gene05842:intron 10.0%
!! ACTAAAAAACTTATTTCAAT+CGG + chr4.4:2443024-2443043 None:intergenic 15.0%
!! ATATTAAAATCTCATATAAG+TGG + chr4.4:2440121-2440140 None:intergenic 15.0%
!! GTTTATGTAAAAAACAATTA+AGG + chr4.4:2441560-2441579 None:intergenic 15.0%
!!! ATAGATACTTTGTTTATTTA+AGG - chr4.4:2440049-2440068 MS.gene05842:intron 15.0%
!!! TAATTCTGTTTTTTAGTTAA+AGG - chr4.4:2443076-2443095 MS.gene05842:intron 15.0%
!! AAACTTAAAGAAAAGAACAA+AGG - chr4.4:2443983-2444002 MS.gene05842:intron 20.0%
!! AAATTAATATGGATGCAATA+GGG - chr4.4:2441923-2441942 MS.gene05842:intron 20.0%
!! AAGCTTAGGATTAAAATAAT+TGG + chr4.4:2439622-2439641 None:intergenic 20.0%
!! AATAAAACTTGTAAATCGTA+AGG + chr4.4:2444051-2444070 None:intergenic 20.0%
!! ACTTAAAATAGAAGCAATTT+GGG - chr4.4:2443711-2443730 MS.gene05842:CDS 20.0%
!! AGAACTATAAATATGATTAC+TGG - chr4.4:2440396-2440415 MS.gene05842:CDS 20.0%
!! ATTAACAGTCTTCATATTAA+GGG - chr4.4:2440253-2440272 MS.gene05842:CDS 20.0%
!! GAATATATATAAGCACTTAA+GGG + chr4.4:2440099-2440118 None:intergenic 20.0%
!! GAATGATTAGATTATAGAAA+AGG + chr4.4:2440488-2440507 None:intergenic 20.0%
!! TATAATCATTTAATATGGAG+AGG - chr4.4:2442721-2442740 MS.gene05842:CDS 20.0%
!! TCAAAAGTTAAATTCATAGA+TGG + chr4.4:2441789-2441808 None:intergenic 20.0%
!! TGTACATATTTATAAAGGAT+GGG + chr4.4:2441712-2441731 None:intergenic 20.0%
!! TTATTTGTTTCATACTTGTA+AGG - chr4.4:2444147-2444166 MS.gene05842:intron 20.0%
!!! AATCATGTTCCTTTTATAAA+TGG + chr4.4:2442587-2442606 None:intergenic 20.0%
!!! ATCATGTTCCTTTTATAAAT+GGG + chr4.4:2442586-2442605 None:intergenic 20.0%
!!! ATTTAACTTTTGAAATGCAA+TGG - chr4.4:2441796-2441815 MS.gene05842:intron 20.0%
!!! CAATATGTATATATGGTTTT+TGG - chr4.4:2441378-2441397 MS.gene05842:intron 20.0%
!!! GTTTTAGGTGATAATTTAAA+AGG - chr4.4:2442053-2442072 MS.gene05842:intron 20.0%
!!! TGTTTATTTAAGGTCTATTA+TGG - chr4.4:2440059-2440078 MS.gene05842:intron 20.0%
! AACTTCACGACAAATTAATA+TGG - chr4.4:2441912-2441931 MS.gene05842:intron 25.0%
! AACTTGATGTCTATAATTTC+TGG - chr4.4:2440692-2440711 MS.gene05842:CDS 25.0%
! AATTAATATGGATGCAATAG+GGG - chr4.4:2441924-2441943 MS.gene05842:intron 25.0%
! AGATTATCAATAACAGAATC+AGG + chr4.4:2443449-2443468 None:intergenic 25.0%
! AGTAAAAAGTTTAACCTGTA+TGG + chr4.4:2440905-2440924 None:intergenic 25.0%
! ATATATGTTTCAGTGATTTC+TGG - chr4.4:2441015-2441034 MS.gene05842:intron 25.0%
! ATCTATTGTTGTCACAAATA+TGG - chr4.4:2439595-2439614 MS.gene05842:CDS 25.0%
! CAAATTAATATGGATGCAAT+AGG - chr4.4:2441922-2441941 MS.gene05842:intron 25.0%
! CATAAGAAGATATAATGTGA+TGG + chr4.4:2444075-2444094 None:intergenic 25.0%
! CATCACATTATATCTTCTTA+TGG - chr4.4:2444073-2444092 MS.gene05842:intron 25.0%
! CTAGCAATTGGATTATTAAT+CGG - chr4.4:2441351-2441370 MS.gene05842:intron 25.0%
! GACAGATATTCAAATTAAGT+TGG - chr4.4:2442646-2442665 MS.gene05842:CDS 25.0%
! GACTTAAAATAGAAGCAATT+TGG - chr4.4:2443710-2443729 MS.gene05842:CDS 25.0%
! GATTAACAGTCTTCATATTA+AGG - chr4.4:2440252-2440271 MS.gene05842:CDS 25.0%
! GGAATATATATAAGCACTTA+AGG + chr4.4:2440100-2440119 None:intergenic 25.0%
! GTACATATTTATAAAGGATG+GGG + chr4.4:2441711-2441730 None:intergenic 25.0%
! GTGTACATATTTATAAAGGA+TGG + chr4.4:2441713-2441732 None:intergenic 25.0%
! TAAAACGTCTAATTTGAACA+CGG - chr4.4:2441819-2441838 MS.gene05842:intron 25.0%
! TAAAATGCCAAAAAGACAAT+TGG + chr4.4:2439489-2439508 None:intergenic 25.0%
! TCAAATCTTCTTTCAAAAAC+TGG - chr4.4:2443191-2443210 MS.gene05842:intron 25.0%
! TCAATACTCACTATAAATCT+TGG + chr4.4:2439791-2439810 None:intergenic 25.0%
! TTCAAATCAAGAAAGAAGAA+CGG + chr4.4:2442510-2442529 None:intergenic 25.0%
! TTCAGCAGGATTTATTAAAT+TGG + chr4.4:2439868-2439887 None:intergenic 25.0%
! TTTAGCAAAGTCAAAGATTA+AGG + chr4.4:2441611-2441630 None:intergenic 25.0%
!! AAATGCTTAATTTGAAGATC+CGG + chr4.4:2441520-2441539 None:intergenic 25.0%
!! ATATCTGTTTTACTCGTTTT+AGG - chr4.4:2443328-2443347 MS.gene05842:CDS 25.0%
!! GACATGATTTTTATAGACAA+CGG + chr4.4:2440744-2440763 None:intergenic 25.0%
!! TAAACTTTTTACTGACACTT+TGG - chr4.4:2440912-2440931 MS.gene05842:intron 25.0%
!! TAATTTGTCGTGAAGTTTAT+AGG + chr4.4:2441909-2441928 None:intergenic 25.0%
!! TGCTTTAGTGAAGAAATTTT+TGG - chr4.4:2443583-2443602 MS.gene05842:intron 25.0%
!!! ATGGTTTTACATGATAATAC+AGG - chr4.4:2441219-2441238 MS.gene05842:intron 25.0%
!!! ATTGGATGTTCAAACTTTTT+TGG + chr4.4:2439850-2439869 None:intergenic 25.0%
!!! ATTTTTGGAGATGAAAACAT+TGG - chr4.4:2443598-2443617 MS.gene05842:intron 25.0%
!!! GATACATTCTTTATTTTCTG+AGG - chr4.4:2440452-2440471 MS.gene05842:intron 25.0%
!!! TGAGTATTGATCATTTTCTT+TGG - chr4.4:2439801-2439820 MS.gene05842:intron 25.0%
!!! TGTTTTTTTTTTTCGAACGT+GGG - chr4.4:2442921-2442940 MS.gene05842:CDS 25.0%
!!! TTGTTTTTTTTTTTCGAACG+TGG - chr4.4:2442920-2442939 MS.gene05842:CDS 25.0%
AAAAACTGAACTTGTATAGC+CGG - chr4.4:2442082-2442101 MS.gene05842:intron 30.0%
AAAAGTTTAACCTGTATGGA+AGG + chr4.4:2440901-2440920 None:intergenic 30.0%
AAACTTATTTCAATCGGAAG+AGG + chr4.4:2443018-2443037 None:intergenic 30.0%
AAAGTCAAAGATTAAGGAAG+GGG + chr4.4:2441605-2441624 None:intergenic 30.0%
AAGACTGTTAATCACAATTC+TGG + chr4.4:2440245-2440264 None:intergenic 30.0%
AATATTGTTGAATCCTTGTC+TGG - chr4.4:2442027-2442046 MS.gene05842:intron 30.0%
ACGACGGTATTAAAAATAAG+AGG + chr4.4:2442188-2442207 None:intergenic 30.0%
ACTAAAGAAATAATTTCCGC+AGG - chr4.4:2439892-2439911 MS.gene05842:intron 30.0%
AGATTATAGAAAAGGACAAG+TGG + chr4.4:2440480-2440499 None:intergenic 30.0%
ATCTTCTTTCAAAAACTGGA+AGG - chr4.4:2443195-2443214 MS.gene05842:intron 30.0%
ATGGGATACGACATTTAATA+TGG - chr4.4:2441200-2441219 MS.gene05842:intron 30.0%
ATTAGATGAAAATCCAACAC+TGG + chr4.4:2442473-2442492 None:intergenic 30.0%
ATTTGAATCATGTGACACTT+TGG + chr4.4:2441766-2441785 None:intergenic 30.0%
CAAAGTCAAAGATTAAGGAA+GGG + chr4.4:2441606-2441625 None:intergenic 30.0%
CACACAAAAACAAACATCTA+TGG + chr4.4:2441331-2441350 None:intergenic 30.0%
CATACTGCAACTTAATGTAA+GGG + chr4.4:2443286-2443305 None:intergenic 30.0%
CTCCAATACATAAGAAAAGA+CGG + chr4.4:2439681-2439700 None:intergenic 30.0%
GAAACTTAAGATAACTGTTG+TGG - chr4.4:2443217-2443236 MS.gene05842:intron 30.0%
GAAAGATACTTGAAACATCA+AGG + chr4.4:2440813-2440832 None:intergenic 30.0%
GCAGTTTGAATTAAGTGATT+AGG - chr4.4:2440716-2440735 MS.gene05842:CDS 30.0%
GGTAGATGAAAAATCATAAG+TGG - chr4.4:2442667-2442686 MS.gene05842:CDS 30.0%
GGTGGTGTACATATTTATAA+AGG + chr4.4:2441717-2441736 None:intergenic 30.0%
TAAAATAGAAGCAATTTGGG+TGG - chr4.4:2443714-2443733 MS.gene05842:CDS 30.0%
TAATTTACTGTGGCATTATC+TGG - chr4.4:2444172-2444191 MS.gene05842:intron 30.0%
TCAAATCAAGAAAGAAGAAC+GGG + chr4.4:2442509-2442528 None:intergenic 30.0%
TCGTATCATAGTCAATACTT+CGG - chr4.4:2439450-2439469 MS.gene05842:CDS 30.0%
TGGTGTAATTTAGTCAAAGA+AGG + chr4.4:2444468-2444487 None:intergenic 30.0%
TTAATCCTAAGCTTTCAACA+AGG - chr4.4:2439628-2439647 MS.gene05842:CDS 30.0%
TTGTAAATCGTAAGGATGTT+TGG + chr4.4:2444043-2444062 None:intergenic 30.0%
TTGTAAGGCTTAATTTACTG+TGG - chr4.4:2444162-2444181 MS.gene05842:intron 30.0%
! AAAGTATCTGGAACATCAAA+AGG + chr4.4:2442881-2442900 None:intergenic 30.0%
! CAAAGGTATGCTTCTTTAAT+AGG - chr4.4:2443752-2443771 MS.gene05842:intron 30.0%
! CACTAAAGCATTTCACAATT+AGG + chr4.4:2443573-2443592 None:intergenic 30.0%
! CTGTTATTGATAATCTGTTC+AGG - chr4.4:2443453-2443472 MS.gene05842:intron 30.0%
! TTCCGTCTTTTCTTATGTAT+TGG - chr4.4:2439676-2439695 MS.gene05842:CDS 30.0%
! TTTCACTCCAATTGTCTTTT+TGG - chr4.4:2439479-2439498 MS.gene05842:CDS 30.0%
! TTTCTGGAAACAAACTTTCT+AGG - chr4.4:2441031-2441050 MS.gene05842:intron 30.0%
! TTTCTTTTGTGTCTCAGAAA+CGG - chr4.4:2439750-2439769 MS.gene05842:intron 30.0%
!! AATTATGCCATGAAAGTATC+TGG + chr4.4:2442893-2442912 None:intergenic 30.0%
!! ACTACTTTCATTTTCAAGAG+CGG + chr4.4:2442991-2443010 None:intergenic 30.0%
!! ATGGTGTTATACACTTATAC+TGG - chr4.4:2444092-2444111 MS.gene05842:intron 30.0%
!! CTAAGCAGAATTTTTAACTC+TGG - chr4.4:2443801-2443820 MS.gene05842:intron 30.0%
!! GTATTGATCATTTTCTTTGG+TGG - chr4.4:2439804-2439823 MS.gene05842:intron 30.0%
!! TTTCACGTTGATAATCTTTC+TGG - chr4.4:2442749-2442768 MS.gene05842:CDS 30.0%
!!! CATTTTTGGAATAGAGGTAA+TGG - chr4.4:2441998-2442017 MS.gene05842:intron 30.0%
!!! GGATAACATTTTTGGAATAG+AGG - chr4.4:2441992-2442011 MS.gene05842:intron 30.0%
!!! GTGTTTTTAAAACTGGTTAC+TGG - chr4.4:2441490-2441509 MS.gene05842:intron 30.0%
!!! TATTGGAGTTTTGAGTTAGT+CGG - chr4.4:2439693-2439712 MS.gene05842:intron 30.0%
!!! TCTTATTTTTAATACCGTCG+TGG - chr4.4:2442187-2442206 MS.gene05842:intron 30.0%
AAATAAAACCTGATCACCAG+AGG + chr4.4:2439993-2440012 None:intergenic 35.0%
AAGCTTTCTTTGCTTTATGG+TGG - chr4.4:2442423-2442442 MS.gene05842:intron 35.0%
AAGTCAAAGATTAAGGAAGG+GGG + chr4.4:2441604-2441623 None:intergenic 35.0%
ACATGTAAATTTGGAAGGAC+TGG - chr4.4:2443627-2443646 MS.gene05842:CDS 35.0%
ACATTCACCTATACTTGATG+TGG + chr4.4:2444304-2444323 None:intergenic 35.0%
ACTTGTTCTTATTGAAGCGA+GGG - chr4.4:2443902-2443921 MS.gene05842:CDS 35.0%
AGAAATAATTTCCGCAGGAA+AGG - chr4.4:2439897-2439916 MS.gene05842:CDS 35.0%
AGGATGATTCAACAATTGTG+TGG - chr4.4:2442279-2442298 MS.gene05842:intron 35.0%
AGTCCTCAGAAATCACTTAA+GGG - chr4.4:2443164-2443183 MS.gene05842:intron 35.0%
AGTGCACATGTAAATTTGGA+AGG - chr4.4:2443622-2443641 MS.gene05842:CDS 35.0%
ATAGTAGTTACCTTCCATAC+AGG - chr4.4:2440888-2440907 MS.gene05842:intron 35.0%
ATGTGACACTTTGGATCTAT+AGG + chr4.4:2441757-2441776 None:intergenic 35.0%
CAACAAAATGGCACAAGTAA+TGG - chr4.4:2441072-2441091 MS.gene05842:intron 35.0%
CATTCACCTATACTTGATGT+GGG + chr4.4:2444303-2444322 None:intergenic 35.0%
CCATACTGCAACTTAATGTA+AGG + chr4.4:2443287-2443306 None:intergenic 35.0%
CCTAGCATCTTGTGAAATTA+AGG - chr4.4:2441296-2441315 MS.gene05842:intron 35.0%
CCTTAATTTCACAAGATGCT+AGG + chr4.4:2441299-2441318 None:intergenic 35.0%
CGGCTGTCAATATGTATATA+TGG - chr4.4:2441371-2441390 MS.gene05842:intron 35.0%
CTTGATGCAAAAGACAGATT+TGG - chr4.4:2443251-2443270 MS.gene05842:CDS 35.0%
CTTGCATGCCCATTTATAAA+AGG - chr4.4:2442575-2442594 MS.gene05842:intron 35.0%
GAAATAATTTCCGCAGGAAA+GGG - chr4.4:2439898-2439917 MS.gene05842:CDS 35.0%
GATAACCTTGTTGAAAGCTT+AGG + chr4.4:2439636-2439655 None:intergenic 35.0%
GCAAAACATGCAAAGTTATG+TGG - chr4.4:2442329-2442348 MS.gene05842:intron 35.0%
GCAAAGTCAAAGATTAAGGA+AGG + chr4.4:2441607-2441626 None:intergenic 35.0%
GGATGATTCAACAATTGTGT+GGG - chr4.4:2442280-2442299 MS.gene05842:intron 35.0%
GTCAAGCTTTCTTTGCTTTA+TGG - chr4.4:2442420-2442439 MS.gene05842:intron 35.0%
GTTAGAATAGGAATTGCCTT+TGG - chr4.4:2440586-2440605 MS.gene05842:intron 35.0%
TAATTTGAACATACCAGCCA+AGG + chr4.4:2440655-2440674 None:intergenic 35.0%
TACTTCCTTAAATCAACTGC+AGG + chr4.4:2440979-2440998 None:intergenic 35.0%
TATATGAAGCTTTACCACGA+CGG + chr4.4:2442204-2442223 None:intergenic 35.0%
TCTCATCGACATACAGAAAT+AGG + chr4.4:2442244-2442263 None:intergenic 35.0%
TGAGAATTGTAGTGAAAGAG+TGG - chr4.4:2443099-2443118 MS.gene05842:intron 35.0%
TGATGTTCCAGATACTTTCA+TGG - chr4.4:2442883-2442902 MS.gene05842:CDS 35.0%
TTAAATGTCGTATCCCATCT+TGG + chr4.4:2441198-2441217 None:intergenic 35.0%
TTACTACCCACATCAAGTAT+AGG - chr4.4:2444294-2444313 MS.gene05842:CDS 35.0%
TTATCTTACATTGCCAGTGT+TGG - chr4.4:2442457-2442476 MS.gene05842:intron 35.0%
TTATTGCTGCTGATCTTAGA+GGG - chr4.4:2443928-2443947 MS.gene05842:CDS 35.0%
TTCATTTGTATCTACACCTG+AGG - chr4.4:2440564-2440583 MS.gene05842:intron 35.0%
TTCCAAGAATGAATGAGCAT+GGG + chr4.4:2440786-2440805 None:intergenic 35.0%
TTGGCTTAGATGATTGTAGT+GGG + chr4.4:2441680-2441699 None:intergenic 35.0%
TTTGCAAGTTGTATCTGCAA+TGG - chr4.4:2442779-2442798 MS.gene05842:CDS 35.0%
! AACTTGTTCTTATTGAAGCG+AGG - chr4.4:2443901-2443920 MS.gene05842:CDS 35.0%
! AGTGCTTTTCCATCTAGTAT+TGG + chr4.4:2440538-2440557 None:intergenic 35.0%
! ATAGCTCTATTGCATGTCTA+AGG + chr4.4:2440315-2440334 None:intergenic 35.0%
! ATGTGGGTAGTAAAGCATTA+TGG + chr4.4:2444287-2444306 None:intergenic 35.0%
! CATTAAGTTGCAGTATGGAA+AGG - chr4.4:2443289-2443308 MS.gene05842:CDS 35.0%
! CCTTACATTAAGTTGCAGTA+TGG - chr4.4:2443284-2443303 MS.gene05842:CDS 35.0%
! CTAAGGAGCATAAATGCAAA+GGG + chr4.4:2440298-2440317 None:intergenic 35.0%
! CTGGAACTTTTCTTGTGATT+TGG + chr4.4:2444413-2444432 None:intergenic 35.0%
! GAATGAGATGAGCATTTTGA+TGG - chr4.4:2440195-2440214 MS.gene05842:CDS 35.0%
! GATTTAAGGAAGTATGCTGT+TGG - chr4.4:2440985-2441004 MS.gene05842:intron 35.0%
! GGGAAGTTTTTGTGAATTCA+TGG - chr4.4:2441944-2441963 MS.gene05842:intron 35.0%
! TCTAAGGAGCATAAATGCAA+AGG + chr4.4:2440299-2440318 None:intergenic 35.0%
! TGGTAGTGCACATGTAAATT+TGG - chr4.4:2443618-2443637 MS.gene05842:CDS 35.0%
! TGTCATGTATTGATGAACCA+AGG - chr4.4:2443362-2443381 MS.gene05842:intron 35.0%
! TTTCTTTAGTTCAGTTCAGC+AGG + chr4.4:2439882-2439901 None:intergenic 35.0%
! TTTGAGGTAGATGAGAATAG+TGG - chr4.4:2443538-2443557 MS.gene05842:intron 35.0%
!! AAAACTGGTTACTGGTTTAC+CGG - chr4.4:2441498-2441517 MS.gene05842:CDS 35.0%
!! CTTTTCTTGTGATTTGGATG+TGG + chr4.4:2444407-2444426 None:intergenic 35.0%
!! GATTGTCTTGTTTGAATCTC+TGG + chr4.4:2444432-2444451 None:intergenic 35.0%
!! GTGAGAGTTATTTTGCAGAT+AGG + chr4.4:2441582-2441601 None:intergenic 35.0%
!! TCCTGAAAATGGGTTTTGAT+TGG - chr4.4:2440167-2440186 MS.gene05842:CDS 35.0%
!! TGTCTGGAATGATACTTTTG+AGG - chr4.4:2443522-2443541 MS.gene05842:intron 35.0%
!! TGTTTTTGTGTGCTAGCAAT+TGG - chr4.4:2441339-2441358 MS.gene05842:intron 35.0%
!! TTTGCTATTACACCAGAATC+AGG + chr4.4:2442314-2442333 None:intergenic 35.0%
!!! ATCCTTGTCTGGTTTGTTTT+AGG - chr4.4:2442038-2442057 MS.gene05842:intron 35.0%
!!! CCTGAAAATGGGTTTTGATT+GGG - chr4.4:2440168-2440187 MS.gene05842:CDS 35.0%
!!! TTTTGGTTCAACTCCAAGAT+GGG - chr4.4:2441182-2441201 MS.gene05842:intron 35.0%
AAAGAGTGGCAATTCTCTGA+TGG - chr4.4:2443113-2443132 MS.gene05842:intron 40.0%
AAATGCTTGTCCCATTTGAG+GGG - chr4.4:2442363-2442382 MS.gene05842:intron 40.0%
AACATCATATGACACAGCAC+TGG + chr4.4:2440860-2440879 None:intergenic 40.0%
AAGGTTATCAGCCATAGTAG+AGG - chr4.4:2439647-2439666 MS.gene05842:CDS 40.0%
ACATCATATGACACAGCACT+GGG + chr4.4:2440859-2440878 None:intergenic 40.0%
ACATGCAAAGTTATGTGGAG+AGG - chr4.4:2442334-2442353 MS.gene05842:intron 40.0%
ACCTTAGAGTTCCTAGATGA+TGG - chr4.4:2444234-2444253 MS.gene05842:CDS 40.0%
ACGATAAACTCATTCGTCGT+AGG + chr4.4:2442816-2442835 None:intergenic 40.0%
AGCAAAGAAAGCTTGACAGA+TGG + chr4.4:2442417-2442436 None:intergenic 40.0%
AGGAGGACTTGAACAAGAAA+TGG - chr4.4:2439425-2439444 MS.gene05842:CDS 40.0%
AGTCATACTTCACACTGTCA+GGG + chr4.4:2441275-2441294 None:intergenic 40.0%
ATTGTAGCCTGTCACAACAT+TGG - chr4.4:2439554-2439573 MS.gene05842:CDS 40.0%
CAACAATTGTGTGGGCAATA+GGG - chr4.4:2442288-2442307 MS.gene05842:intron 40.0%
CAACATTGGAACAATGTGAG+TGG - chr4.4:2439568-2439587 MS.gene05842:CDS 40.0%
CACCTAAAACAAACCAGACA+AGG + chr4.4:2442043-2442062 None:intergenic 40.0%
CAGTCCTCAGAAATCACTTA+AGG - chr4.4:2443163-2443182 MS.gene05842:intron 40.0%
CATTGTTCCAATGTTGTGAC+AGG + chr4.4:2439564-2439583 None:intergenic 40.0%
CCATAGTTTACCCTCACAAA+AGG + chr4.4:2443963-2443982 None:intergenic 40.0%
CGGAAATTTCACCTCTACTA+TGG + chr4.4:2439661-2439680 None:intergenic 40.0%
CTTATTGCTGCTGATCTTAG+AGG - chr4.4:2443927-2443946 MS.gene05842:CDS 40.0%
GAAATGCTTGTCCCATTTGA+GGG - chr4.4:2442362-2442381 MS.gene05842:intron 40.0%
GACATTTGTAGAGGTAGAAG+CGG - chr4.4:2441131-2441150 MS.gene05842:intron 40.0%
GATAACTGTTGTGGAAGCAA+AGG - chr4.4:2443226-2443245 MS.gene05842:intron 40.0%
GATCCCTTAAGTGATTTCTG+AGG + chr4.4:2443170-2443189 None:intergenic 40.0%
GCAAAGAAAGCTTGACAGAT+GGG + chr4.4:2442416-2442435 None:intergenic 40.0%
GCAATTCCTATTCTAACCTC+AGG + chr4.4:2440583-2440602 None:intergenic 40.0%
GGAACATGATTATACCACCT+TGG - chr4.4:2442596-2442615 MS.gene05842:CDS 40.0%
GTCCTTTACATGCAATGTCA+GGG + chr4.4:2444265-2444284 None:intergenic 40.0%
GTGTCCATTTCAAAGGAGTA+GGG + chr4.4:2443845-2443864 None:intergenic 40.0%
GTTCCAAGAATGAATGAGCA+TGG + chr4.4:2440787-2440806 None:intergenic 40.0%
GTTGTGACACCAATACTAGA+TGG - chr4.4:2440526-2440545 MS.gene05842:intron 40.0%
TAGTCATACTTCACACTGTC+AGG + chr4.4:2441276-2441295 None:intergenic 40.0%
TCAACAATTGTGTGGGCAAT+AGG - chr4.4:2442287-2442306 MS.gene05842:intron 40.0%
TCCATCATCTAGGAACTCTA+AGG + chr4.4:2444238-2444257 None:intergenic 40.0%
TCCTTTACATGCAATGTCAG+GGG + chr4.4:2444264-2444283 None:intergenic 40.0%
TCTACACCTGAGGTTAGAAT+AGG - chr4.4:2440574-2440593 MS.gene05842:intron 40.0%
TGAAATGCTTGTCCCATTTG+AGG - chr4.4:2442361-2442380 MS.gene05842:intron 40.0%
TGACACTTTGGTAAAGACCA+TGG - chr4.4:2440924-2440943 MS.gene05842:intron 40.0%
TGGCTTAGATGATTGTAGTG+GGG + chr4.4:2441679-2441698 None:intergenic 40.0%
TGTATGTCGATGAGAAGATG+AGG - chr4.4:2442249-2442268 MS.gene05842:intron 40.0%
TGTCGTGAAGTTTATAGGTG+AGG + chr4.4:2441904-2441923 None:intergenic 40.0%
TGTGTCCATTTCAAAGGAGT+AGG + chr4.4:2443846-2443865 None:intergenic 40.0%
TTACCAGCGGAAAATACTTG+AGG - chr4.4:2439405-2439424 MS.gene05842:CDS 40.0%
TTACTGTGGCATTATCTGGT+AGG - chr4.4:2444176-2444195 MS.gene05842:intron 40.0%
TTGACCATCTAATCCCTTGA+AGG + chr4.4:2439970-2439989 None:intergenic 40.0%
! AAAGCTCTGATGTCATGTCA+AGG - chr4.4:2442624-2442643 MS.gene05842:CDS 40.0%
! AATTTGGAAGGACTGGTACA+AGG - chr4.4:2443634-2443653 MS.gene05842:CDS 40.0%
! ACTTTCTAGGAGTTGCTTCA+AGG - chr4.4:2441044-2441063 MS.gene05842:intron 40.0%
! ATAGGAATTGCCTTTGGAAG+CGG - chr4.4:2440592-2440611 MS.gene05842:CDS 40.0%
! ATTTGGAAGGACTGGTACAA+GGG - chr4.4:2443635-2443654 MS.gene05842:CDS 40.0%
! CCCAATCAAAACCCATTTTC+AGG + chr4.4:2440171-2440190 None:intergenic 40.0%
! CCTTTTGTGAGGGTAAACTA+TGG - chr4.4:2443960-2443979 MS.gene05842:CDS 40.0%
! CTTAAGTGATTTCTGAGGAC+TGG + chr4.4:2443165-2443184 None:intergenic 40.0%
! CTTTCTAGGAGTTGCTTCAA+GGG - chr4.4:2441045-2441064 MS.gene05842:intron 40.0%
! GACAAGTGATCCTTTTGTGA+GGG - chr4.4:2443950-2443969 MS.gene05842:CDS 40.0%
! GGGCAAGAGGATAACATTTT+TGG - chr4.4:2441984-2442003 MS.gene05842:intron 40.0%
! GTTGGCTTAGATGATTGTAG+TGG + chr4.4:2441681-2441700 None:intergenic 40.0%
! GTTTGCCTGCAGTTGATTTA+AGG - chr4.4:2440971-2440990 MS.gene05842:intron 40.0%
! TTAAGGAAGTATGCTGTTGG+AGG - chr4.4:2440988-2441007 MS.gene05842:intron 40.0%
! TTTCTAGGAGTTGCTTCAAG+GGG - chr4.4:2441046-2441065 MS.gene05842:intron 40.0%
!! GCTTTATGGTGGATATAGCT+TGG - chr4.4:2442434-2442453 MS.gene05842:intron 40.0%
!!! CGGCATCGTGTTTTTAAAAC+TGG - chr4.4:2441483-2441502 MS.gene05842:intron 40.0%
!!! GAAGTGCTGGAATTTTCACT+TGG - chr4.4:2439923-2439942 MS.gene05842:CDS 40.0%
!!! GTTTTAAAAACACGATGCCG+TGG + chr4.4:2441483-2441502 None:intergenic 40.0%
!!! GTTTTGGTTCAACTCCAAGA+TGG - chr4.4:2441181-2441200 MS.gene05842:intron 40.0%
AAAGGATGGGGAAAAGCTGT+TGG + chr4.4:2441699-2441718 None:intergenic 45.0%
AATATGTACACCACCACCCA+TGG - chr4.4:2441722-2441741 MS.gene05842:intron 45.0%
AATGCTTGTCCCATTTGAGG+GGG - chr4.4:2442364-2442383 MS.gene05842:intron 45.0%
AATTTGGGTGGAGAACCAAG+AGG - chr4.4:2443726-2443745 MS.gene05842:intron 45.0%
ACAAAACTGTCAACCCTCGT+TGG - chr4.4:2444205-2444224 MS.gene05842:intron 45.0%
ACAAGTGGATACCTCTCCAA+GGG - chr4.4:2444364-2444383 MS.gene05842:intron 45.0%
ACTGGTACAAGGGTCAATCA+GGG - chr4.4:2443645-2443664 MS.gene05842:CDS 45.0%
AGAAGAAAACGTGAGCGACA+AGG - chr4.4:2441101-2441120 MS.gene05842:intron 45.0%
AGAATGAATGAGCATGGGAG+AGG + chr4.4:2440781-2440800 None:intergenic 45.0%
AGCATACCTTTGATCCCTCT+TGG + chr4.4:2443744-2443763 None:intergenic 45.0%
ATGGTTGCTAAGCTTTCCGT+TGG - chr4.4:2440214-2440233 MS.gene05842:CDS 45.0%
ATTGCTCTGTTCTCGGTTAC+CGG + chr4.4:2442104-2442123 None:intergenic 45.0%
ATTTGGGTGGAGAACCAAGA+GGG - chr4.4:2443727-2443746 MS.gene05842:intron 45.0%
ATTTGTAGAGGTAGAAGCGG+AGG - chr4.4:2441134-2441153 MS.gene05842:intron 45.0%
CAAAACTGTCAACCCTCGTT+GGG - chr4.4:2444206-2444225 MS.gene05842:intron 45.0%
CACAATTCTGGCAGTACCAA+CGG + chr4.4:2440233-2440252 None:intergenic 45.0%
CACTCTCAACTATTGTGCCA+CGG - chr4.4:2441463-2441482 MS.gene05842:intron 45.0%
CACTTTGGTAAAGACCATGG+TGG - chr4.4:2440927-2440946 MS.gene05842:intron 45.0%
CAGAACTCACTCCTTCAAGT+GGG + chr4.4:2443681-2443700 None:intergenic 45.0%
CATCATATGACACAGCACTG+GGG + chr4.4:2440858-2440877 None:intergenic 45.0%
CCACATCATTGCTCTGTTCT+CGG + chr4.4:2442111-2442130 None:intergenic 45.0%
CTATAGGCATGTGTGACCAT+GGG + chr4.4:2441741-2441760 None:intergenic 45.0%
CTCCCATGCTCATTCATTCT+TGG - chr4.4:2440781-2440800 MS.gene05842:CDS 45.0%
GGACTCTGTGTCCATTTCAA+AGG + chr4.4:2443852-2443871 None:intergenic 45.0%
GGACTTGCAGACATTTGTAG+AGG - chr4.4:2441122-2441141 MS.gene05842:intron 45.0%
GGCTTAGATGATTGTAGTGG+GGG + chr4.4:2441678-2441697 None:intergenic 45.0%
GGGAGAGGCAAAGAATGAAA+AGG + chr4.4:2440766-2440785 None:intergenic 45.0%
GGTCCTTTACATGCAATGTC+AGG + chr4.4:2444266-2444285 None:intergenic 45.0%
GTATCATTCCAGACAGCAGT+TGG + chr4.4:2443517-2443536 None:intergenic 45.0%
GTCATACTTCACACTGTCAG+GGG + chr4.4:2441274-2441293 None:intergenic 45.0%
TCATACTTCACACTGTCAGG+GGG + chr4.4:2441273-2441292 None:intergenic 45.0%
TCCCCTGACATTGCATGTAA+AGG - chr4.4:2444260-2444279 MS.gene05842:CDS 45.0%
TCTATAGGCATGTGTGACCA+TGG + chr4.4:2441742-2441761 None:intergenic 45.0%
TGACAGCGACTCCTGAAAAT+GGG - chr4.4:2440157-2440176 MS.gene05842:CDS 45.0%
TTCAAGGGGAGGCAACAAAA+TGG - chr4.4:2441060-2441079 MS.gene05842:intron 45.0%
TTGACAGCGACTCCTGAAAA+TGG - chr4.4:2440156-2440175 MS.gene05842:CDS 45.0%
TTGCAGTATGGAAAGGTGAG+AGG - chr4.4:2443296-2443315 MS.gene05842:CDS 45.0%
! AGATGATTGTAGTGGGGGTT+TGG + chr4.4:2441673-2441692 None:intergenic 45.0%
! ATGGCAACGACGAGTTTTTC+TGG - chr4.4:2441963-2441982 MS.gene05842:intron 45.0%
! CAAGCCCTACTCCTTTGAAA+TGG - chr4.4:2443838-2443857 MS.gene05842:intron 45.0%
! CATCAGAGCTTTTGTGACCA+AGG + chr4.4:2442616-2442635 None:intergenic 45.0%
! CTGATTTGTCCCCCTCAAAT+GGG + chr4.4:2442376-2442395 None:intergenic 45.0%
! GGACAAGTGATCCTTTTGTG+AGG - chr4.4:2443949-2443968 MS.gene05842:CDS 45.0%
! GTCAAAGAAGGTACAGAGTC+TGG + chr4.4:2444456-2444475 None:intergenic 45.0%
! TAAAGACCATGGTGGAACCT+CGG - chr4.4:2440935-2440954 MS.gene05842:intron 45.0%
! TAGGAATTGCCTTTGGAAGC+GGG - chr4.4:2440593-2440612 MS.gene05842:CDS 45.0%
! TATGGAAAGGTGAGAGGTAC+TGG - chr4.4:2443302-2443321 MS.gene05842:CDS 45.0%
! TGGCAACGACGAGTTTTTCT+GGG - chr4.4:2441964-2441983 MS.gene05842:intron 45.0%
! TTTGAGTTAGTCGGTGAGTG+TGG - chr4.4:2439702-2439721 MS.gene05842:intron 45.0%
!! CATCTAGGAACTCTAAGGTC+TGG + chr4.4:2444233-2444252 None:intergenic 45.0%
!! GACGACATTTTGACAATCGC+TGG + chr4.4:2442156-2442175 None:intergenic 45.0%
AAGAGCGGAAATGTCTCTGC+GGG + chr4.4:2442976-2442995 None:intergenic 50.0%
AAGGGTCAATCAGGGACGTA+TGG - chr4.4:2443653-2443672 MS.gene05842:CDS 50.0%
AATCCCTTGAAGGCCCAAAC+TGG + chr4.4:2439960-2439979 None:intergenic 50.0%
ACAGCAGTTGGAGTAGTAGG+AGG + chr4.4:2443505-2443524 None:intergenic 50.0%
AGAAACACCAGGCAACTCAG+TGG + chr4.4:2440632-2440651 None:intergenic 50.0%
AGCACTTCAACCCTTTCCTG+CGG + chr4.4:2439911-2439930 None:intergenic 50.0%
AGTTGCCTGGTGTTTCTCCT+TGG - chr4.4:2440635-2440654 MS.gene05842:CDS 50.0%
AGTTGGTTGTGGGTACGAGA+TGG + chr4.4:2441641-2441660 None:intergenic 50.0%
ATCCCTTGAAGGCCCAAACT+GGG + chr4.4:2439959-2439978 None:intergenic 50.0%
ATGGACACAGAGTCCACCAT+CGG - chr4.4:2443857-2443876 MS.gene05842:intron 50.0%
ATGGTCAACCTCTGGTGATC+AGG - chr4.4:2439982-2440001 MS.gene05842:CDS 50.0%
CAAGAGCGGAAATGTCTCTG+CGG + chr4.4:2442977-2442996 None:intergenic 50.0%
CAAGTGGATACCTCTCCAAG+GGG - chr4.4:2444365-2444384 MS.gene05842:intron 50.0%
CACTTGTCTGACGTCTGGTT+CGG + chr4.4:2444351-2444370 None:intergenic 50.0%
CAGACAGCAGTTGGAGTAGT+AGG + chr4.4:2443508-2443527 None:intergenic 50.0%
CATACTTCACACTGTCAGGG+GGG + chr4.4:2441272-2441291 None:intergenic 50.0%
CCACTTGAAGGAGTGAGTTC+TGG - chr4.4:2443679-2443698 MS.gene05842:CDS 50.0%
CCAGAACTCACTCCTTCAAG+TGG + chr4.4:2443682-2443701 None:intergenic 50.0%
CCAGCGGAAAATACTTGAGG+AGG - chr4.4:2439408-2439427 MS.gene05842:CDS 50.0%
CCGAGAACAGAGCAATGATG+TGG - chr4.4:2442108-2442127 MS.gene05842:intron 50.0%
CGATGAGAAGATGAGGCATG+TGG - chr4.4:2442256-2442275 MS.gene05842:intron 50.0%
CTACTACTCCAACTGCTGTC+TGG - chr4.4:2443506-2443525 MS.gene05842:intron 50.0%
CTGCAGGCAAACTGAAACAG+CGG + chr4.4:2440963-2440982 None:intergenic 50.0%
GACAAGTGGATACCTCTCCA+AGG - chr4.4:2444363-2444382 MS.gene05842:intron 50.0%
GACGTATGGATCCCACTTGA+AGG - chr4.4:2443667-2443686 MS.gene05842:CDS 50.0%
GACTGGTACAAGGGTCAATC+AGG - chr4.4:2443644-2443663 MS.gene05842:CDS 50.0%
GGAGAACCAAGAGGGATCAA+AGG - chr4.4:2443735-2443754 MS.gene05842:intron 50.0%
GGGATTAGATGGTCAACCTC+TGG - chr4.4:2439974-2439993 MS.gene05842:CDS 50.0%
GTATCCACTTGTCTGACGTC+TGG + chr4.4:2444356-2444375 None:intergenic 50.0%
TCAGGGGACTTCCATCATCT+AGG + chr4.4:2444248-2444267 None:intergenic 50.0%
TGAGAAGATGAGGCATGTGG+AGG - chr4.4:2442259-2442278 MS.gene05842:intron 50.0%
TGGGCCTTCAAGGGATTAGA+TGG - chr4.4:2439963-2439982 MS.gene05842:CDS 50.0%
! AGGAATTGCCTTTGGAAGCG+GGG - chr4.4:2440594-2440613 MS.gene05842:CDS 50.0%
! AGGAGAACAGGTGTGCGTTT+TGG - chr4.4:2441165-2441184 MS.gene05842:intron 50.0%
! ATTGTAGTGGGGGTTTGGCT+AGG + chr4.4:2441668-2441687 None:intergenic 50.0%
! ATTTCTGAGGACTGGCATGG+AGG + chr4.4:2443157-2443176 None:intergenic 50.0%
! CAGAGCTTTTGTGACCAAGG+TGG + chr4.4:2442613-2442632 None:intergenic 50.0%
! CCTCCTCAAGTATTTTCCGC+TGG + chr4.4:2439411-2439430 None:intergenic 50.0%
! GACGAGTTTTTCTGGGCAAG+AGG - chr4.4:2441971-2441990 MS.gene05842:intron 50.0%
! GCTAGGATGGAGTTGGTTGT+GGG + chr4.4:2441651-2441670 None:intergenic 50.0%
! GGATGTTTGGTTCACGCAAG+AGG + chr4.4:2444030-2444049 None:intergenic 50.0%
! GTGATTTCTGAGGACTGGCA+TGG + chr4.4:2443160-2443179 None:intergenic 50.0%
!! GCTGATTTGTCCCCCTCAAA+TGG + chr4.4:2442377-2442396 None:intergenic 50.0%
ACCAGCCAAGGAGAAACACC+AGG + chr4.4:2440643-2440662 None:intergenic 55.0%
AGAGCGGAAATGTCTCTGCG+GGG + chr4.4:2442975-2442994 None:intergenic 55.0%
CAACCATTCGTCATGCCCGA+TGG + chr4.4:2443876-2443895 None:intergenic 55.0%
CAATCAGCCACTGAGTTGCC+TGG - chr4.4:2440622-2440641 MS.gene05842:CDS 55.0%
CAGGCAACTCAGTGGCTGAT+TGG + chr4.4:2440624-2440643 None:intergenic 55.0%
CATCGGGCATGACGAATGGT+TGG - chr4.4:2443874-2443893 MS.gene05842:intron 55.0%
CCTCTCCAAGGGGTGAAAAG+TGG - chr4.4:2444375-2444394 MS.gene05842:intron 55.0%
CGAACCAGACGTCAGACAAG+TGG - chr4.4:2444349-2444368 MS.gene05842:intron 55.0%
CTAAGGTCTGGTCCCAACGA+GGG + chr4.4:2444221-2444240 None:intergenic 55.0%
CTAGGAGTTGCTTCAAGGGG+AGG - chr4.4:2441049-2441068 MS.gene05842:intron 55.0%
CTCCCAGTTTGGGCCTTCAA+GGG - chr4.4:2439954-2439973 MS.gene05842:CDS 55.0%
CTTGAAGGCCCAAACTGGGA+GGG + chr4.4:2439955-2439974 None:intergenic 55.0%
GAGGAGCTGACAAGGAGAAC+AGG - chr4.4:2441153-2441172 MS.gene05842:intron 55.0%
GCAGGAAAGGGTTGAAGTGC+TGG - chr4.4:2439910-2439929 MS.gene05842:CDS 55.0%
GCAGTTGGAGTAGTAGGAGG+AGG + chr4.4:2443502-2443521 None:intergenic 55.0%
GGGTTTGGCTAGGATGGAGT+TGG + chr4.4:2441658-2441677 None:intergenic 55.0%
GTTGTGGGTACGAGATGGTG+TGG + chr4.4:2441636-2441655 None:intergenic 55.0%
TAGAAGCGGAGGAGCTGACA+AGG - chr4.4:2441145-2441164 MS.gene05842:intron 55.0%
TAGGCATGTGTGACCATGGG+TGG + chr4.4:2441738-2441757 None:intergenic 55.0%
TAGTGGGGGTTTGGCTAGGA+TGG + chr4.4:2441664-2441683 None:intergenic 55.0%
TGAGGGGGACAAATCAGCAG+AGG - chr4.4:2442379-2442398 MS.gene05842:intron 55.0%
TGGACACAGAGTCCACCATC+GGG - chr4.4:2443858-2443877 MS.gene05842:intron 55.0%
TGGGCAATAGGGCCTGATTC+TGG - chr4.4:2442299-2442318 MS.gene05842:intron 55.0%
! GGAATTGCCTTTGGAAGCGG+GGG - chr4.4:2440595-2440614 MS.gene05842:CDS 55.0%
! GGCTAGGATGGAGTTGGTTG+TGG + chr4.4:2441652-2441671 None:intergenic 55.0%
! TCTAAGGTCTGGTCCCAACG+AGG + chr4.4:2444222-2444241 None:intergenic 55.0%
!! CCACTTTTCACCCCTTGGAG+AGG + chr4.4:2444378-2444397 None:intergenic 55.0%
!! TTGTCTGACGTCTGGTTCGG+AGG + chr4.4:2444348-2444367 None:intergenic 55.0%
!!! TCTCGCCACTTTTCACCCCT+TGG + chr4.4:2444383-2444402 None:intergenic 55.0%
AAACTGAAACAGCGGCGCCG+AGG + chr4.4:2440955-2440974 None:intergenic 60.0%
CCACCATCGGGCATGACGAA+TGG - chr4.4:2443870-2443889 MS.gene05842:intron 60.0%
CCATTCGTCATGCCCGATGG+TGG + chr4.4:2443873-2443892 None:intergenic 60.0%
CCTCCCAGTTTGGGCCTTCA+AGG - chr4.4:2439953-2439972 MS.gene05842:CDS 60.0%
CCTTGAAGGCCCAAACTGGG+AGG + chr4.4:2439956-2439975 None:intergenic 60.0%
GCATGTGTGACCATGGGTGG+TGG + chr4.4:2441735-2441754 None:intergenic 60.0%
GCCTGGTGTTTCTCCTTGGC+TGG - chr4.4:2440639-2440658 MS.gene05842:CDS 60.0%
GGATCACGCCCTCCCAGTTT+GGG - chr4.4:2439944-2439963 MS.gene05842:CDS 60.0%
TGGATCACGCCCTCCCAGTT+TGG - chr4.4:2439943-2439962 MS.gene05842:CDS 60.0%
TTGGCTTCCCCCGCTTCCAA+AGG + chr4.4:2440605-2440624 None:intergenic 60.0%
! CTGAGGACTGGCATGGAGGT+TGG + chr4.4:2443153-2443172 None:intergenic 60.0%
!! CTGACGTCTGGTTCGGAGGA+AGG + chr4.4:2444344-2444363 None:intergenic 60.0%
! GCGGCGCCGAGGTTCCACCA+TGG + chr4.4:2440944-2440963 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 2439397 2444500 2439397 ID=MS.gene05842
chr4.4 mRNA 2439397 2444500 2439397 ID=MS.gene05842.t1;Parent=MS.gene05842
chr4.4 exon 2444426 2444500 2444426 ID=MS.gene05842.t1.exon1;Parent=MS.gene05842.t1
chr4.4 CDS 2444426 2444500 2444426 ID=cds.MS.gene05842.t1;Parent=MS.gene05842.t1
chr4.4 exon 2444229 2444336 2444229 ID=MS.gene05842.t1.exon2;Parent=MS.gene05842.t1
chr4.4 CDS 2444229 2444336 2444229 ID=cds.MS.gene05842.t1;Parent=MS.gene05842.t1
chr4.4 exon 2444098 2444130 2444098 ID=MS.gene05842.t1.exon3;Parent=MS.gene05842.t1
chr4.4 CDS 2444098 2444130 2444098 ID=cds.MS.gene05842.t1;Parent=MS.gene05842.t1
chr4.4 exon 2443894 2443983 2443894 ID=MS.gene05842.t1.exon4;Parent=MS.gene05842.t1
chr4.4 CDS 2443894 2443983 2443894 ID=cds.MS.gene05842.t1;Parent=MS.gene05842.t1
chr4.4 exon 2443618 2443734 2443618 ID=MS.gene05842.t1.exon5;Parent=MS.gene05842.t1
chr4.4 CDS 2443618 2443734 2443618 ID=cds.MS.gene05842.t1;Parent=MS.gene05842.t1
chr4.4 exon 2443237 2443374 2443237 ID=MS.gene05842.t1.exon6;Parent=MS.gene05842.t1
chr4.4 CDS 2443237 2443374 2443237 ID=cds.MS.gene05842.t1;Parent=MS.gene05842.t1
chr4.4 exon 2442580 2442987 2442580 ID=MS.gene05842.t1.exon7;Parent=MS.gene05842.t1
chr4.4 CDS 2442580 2442987 2442580 ID=cds.MS.gene05842.t1;Parent=MS.gene05842.t1
chr4.4 exon 2441497 2441631 2441497 ID=MS.gene05842.t1.exon8;Parent=MS.gene05842.t1
chr4.4 CDS 2441497 2441631 2441497 ID=cds.MS.gene05842.t1;Parent=MS.gene05842.t1
chr4.4 exon 2440587 2440805 2440587 ID=MS.gene05842.t1.exon9;Parent=MS.gene05842.t1
chr4.4 CDS 2440587 2440805 2440587 ID=cds.MS.gene05842.t1;Parent=MS.gene05842.t1
chr4.4 exon 2440141 2440422 2440141 ID=MS.gene05842.t1.exon10;Parent=MS.gene05842.t1
chr4.4 CDS 2440141 2440422 2440141 ID=cds.MS.gene05842.t1;Parent=MS.gene05842.t1
chr4.4 exon 2439893 2440030 2439893 ID=MS.gene05842.t1.exon11;Parent=MS.gene05842.t1
chr4.4 CDS 2439893 2440030 2439893 ID=cds.MS.gene05842.t1;Parent=MS.gene05842.t1
chr4.4 exon 2439397 2439699 2439397 ID=MS.gene05842.t1.exon12;Parent=MS.gene05842.t1
chr4.4 CDS 2439397 2439699 2439397 ID=cds.MS.gene05842.t1;Parent=MS.gene05842.t1
Gene Sequence

>MS.gene05842

TATGGGAATTACCAGCGGAAAATACTTGAGGAGGACTTGAACAAGAAATGGAATCGTATCATAGTCAATACTTCGGTATGTTTTTCACTCCAATTGTCTTTTTGGCATTTTATGAATGAGCTTTTATCATGTTTATTTCAACTTATTTTCTTTGTACATTGTAGCCTGTCACAACATTGGAACAATGTGAGTGGTTGAATCTATTGTTGTCACAAATATGGTCCAATTATTTTAATCCTAAGCTTTCAACAAGGTTATCAGCCATAGTAGAGGTGAAATTTCCGTCTTTTCTTATGTATTGGAGTTTTGAGTTAGTCGGTGAGTGTGGAATTAATCAACTTATCAATTTTTTTTTTCTTTTGTGTCTCAGAAACGGTTAAAGCTGCGCAAACCAAGATTTATAGTGAGTATTGATCATTTTCTTTGGTGGAAGAGTTTCACATTTGTTTACCAAAAAAGTTTGAACATCCAATTTAATAAATCCTGCTGAACTGAACTAAAGAAATAATTTCCGCAGGAAAGGGTTGAAGTGCTGGAATTTTCACTTGGATCACGCCCTCCCAGTTTGGGCCTTCAAGGGATTAGATGGTCAACCTCTGGTGATCAGGTTTTATTTTGCATCACATTTCAGATGTCGCTTCTGTATAACTTTATAGATACTTTGTTTATTTAAGGTCTATTATGGCGAATGCTTTTCTTCCCTTAAGTGCTTATATATATTCCACTTATATGAGATTTTAATATAGAATTCTATTGGTATTGACAGCGACTCCTGAAAATGGGTTTTGATTGGGACACGAATGAGATGAGCATTTTGATGGTTGCTAAGCTTTCCGTTGGTACTGCCAGAATTGTGATTAACAGTCTTCATATTAAGGGTGATGTATGTGAAATAACACCCTTTGCATTTATGCTCCTTAGACATGCAATAGAGCTATATATACTAAAGAAAGTAGCAGAAATGAAAACAAATTAGTAGTTTAGATTGCTTGCTAATGTAGAACTATAAATATGATTACTGGTATACTGCAGTTTTGAAGAAAATTATTTTCTGTGATACATTCTTTATTTTCTGAGGCACCACTTGTCCTTTTCTATAATCTAATCATTCAAATTATTTTTGCAGCTTGTTGTGACACCAATACTAGATGGAAAAGCACTTTTGTATTCATTTGTATCTACACCTGAGGTTAGAATAGGAATTGCCTTTGGAAGCGGGGGAAGCCAATCAGCCACTGAGTTGCCTGGTGTTTCTCCTTGGCTGGTATGTTCAAATTAGTCAAAATTTATAGAAAAACTTGATGTCTATAATTTCTGGCGCAGTTTGAATTAAGTGATTAGGATCCGTTGTCTATAAAAATCATGTCCTTTTCATTCTTTGCCTCTCCCATGCTCATTCATTCTTGGAACATTCCTTGATGTTTCAAGTATCTTTCGTTAGTTTTCTCTCTGAATTTTCCCCAGTGCTGTGTCATATGATGTTTCATGCTAATAGTAGTTACCTTCCATACAGGTTAAACTTTTTACTGACACTTTGGTAAAGACCATGGTGGAACCTCGGCGCCGCTGTTTCAGTTTGCCTGCAGTTGATTTAAGGAAGTATGCTGTTGGAGGCACAATATATGTTTCAGTGATTTCTGGAAACAAACTTTCTAGGAGTTGCTTCAAGGGGAGGCAACAAAATGGCACAAGTAATGGCTGTTTAGAAGAAAACGTGAGCGACAAGGACTTGCAGACATTTGTAGAGGTAGAAGCGGAGGAGCTGACAAGGAGAACAGGTGTGCGTTTTGGTTCAACTCCAAGATGGGATACGACATTTAATATGGTTTTACATGATAATACAGGAATAGTTCGCTTCAATCTTTATCAGTGCCCCCCTGACAGTGTGAAGTATGACTACCTAGCATCTTGTGAAATTAAGGTATTGTCATCCATAGATGTTTGTTTTTGTGTGCTAGCAATTGGATTATTAATCGGCTGTCAATATGTATATATGGTTTTTGGACAAGCAATTTTATTTTTAGAGCAATGCTATTGACAGACACTTTAACACTCGCTAGTTAAGACACTCTCAACTATTGTGCCACGGCATCGTGTTTTTAAAACTGGTTACTGGTTTACCGGATCTTCAAATTAAGCATTTCTAACGCTTTTTTTTTTCCTTAATTGTTTTTTACATAAACCTATCTGCAAAATAACTCTCACCCCCTTCCTTAATCTTTGACTTTGCTAAAGACCACACCATCTCGTACCCACAACCAACTCCATCCTAGCCAAACCCCCACTACAATCATCTAAGCCAACAGCTTTTCCCCATCCTTTATAAATATGTACACCACCACCCATGGTCACACATGCCTATAGATCCAAAGTGTCACATGATTCAAATCCATCTATGAATTTAACTTTTGAAATGCAATGGTAAAACGTCTAATTTGAACACGGATCAATCTATGAGTTTTTAGCTTTATTATTTGCAATATCAGCTGTCAAAAAAATCTACACCTCACCTATAAACTTCACGACAAATTAATATGGATGCAATAGGGGAAGTTTTTGTGAATTCATGGCAACGACGAGTTTTTCTGGGCAAGAGGATAACATTTTTGGAATAGAGGTAATGGAGAAGAAATATTGTTGAATCCTTGTCTGGTTTGTTTTAGGTGATAATTTAAAAGGCTAAAAAAAAACTGAACTTGTATAGCCGGTAACCGAGAACAGAGCAATGATGTGGCTCAATATTTGAGCAACTGTTACCAGCGATTGTCAAAATGTCGTCTGTAGCATTCCTCTTATTTTTAATACCGTCGTGGTAAAGCTTCATATATGCTATTTGAACGCTAACCTATTTCTGTATGTCGATGAGAAGATGAGGCATGTGGAGGATGATTCAACAATTGTGTGGGCAATAGGGCCTGATTCTGGTGTAATAGCAAAACATGCAAAGTTATGTGGAGAGGAAGTTGAAATGCTTGTCCCATTTGAGGGGGACAAATCAGCAGAGGTACAATATTTACCCATCTGTCAAGCTTTCTTTGCTTTATGGTGGATATAGCTTGGTTATCTTACATTGCCAGTGTTGGATTTTCATCTAATCAAAGCTTAAGCGCCCGTTCTTCTTTCTTGATTTGAACTTATGCGCTCTTTGAGTACTAAGAAACAAGCATACTCTATCTTTCTTGCATGCCCATTTATAAAAGGAACATGATTATACCACCTTGGTCACAAAAGCTCTGATGTCATGTCAAGGACAGATATTCAAATTAAGTTGGTAGATGAAAAATCATAAGTGGTTTTTATATATCTTACAGTTACACATGATTATATAATCATTTAATATGGAGAGGTAGAGTTTCACGTTGATAATCTTTCTGGAGCAATGTTTGCAAGTTGTATCTGCAATGGCATTTTGTTATCCTACGACGAATGAGTTTATCGTATCAAATTGTTTGTATTCTGTGATTTCTACTAAATCAAGCAGCCTTTTGATGTTCCAGATACTTTCATGGCATAATTTTTTTCATTGTTTTTTTTTTTCGAACGTGGGTTTCATGATAGAGTCACTATCAAATTGTCCCCGCAGAGACATTTCCGCTCTTGAAAATGAAAGTAGTTGTACCTCTTCCGATTGAAATAAGTTTTTTAGTAAACAGACTGTTTCATCCATTTTAACTTTTTTTAATTCTGTTTTTTAGTTAAAGGTGAGAATTGTAGTGAAAGAGTGGCAATTCTCTGATGGTTCTCATAGCTTGACCAACCTCCATGCCAGTCCTCAGAAATCACTTAAGGGATCATCAAATCTTCTTTCAAAAACTGGAAGGAAACTTAAGATAACTGTTGTGGAAGCAAAGGATCTTGATGCAAAAGACAGATTTGGAAAATTTGACCCTTACATTAAGTTGCAGTATGGAAAGGTGAGAGGTACTGGTACATATCTGTTTTACTCGTTTTAGGTCTTAGCACTATGTCATGTATTGATGAACCAAGGTTTTTAATATATTTATATTGAAATGTAATTTGATGCAATGTAAGTTCATAATAACACTTTACCTGATTCTGTTATTGATAATCTGTTCAGGTTGTCATGAAAACAAAGATTGCTCCTCCTCCTACTACTCCAACTGCTGTCTGGAATGATACTTTTGAGGTAGATGAGAATAGTGGTGATGAATACCTAATTGTGAAATGCTTTAGTGAAGAAATTTTTGGAGATGAAAACATTGGTAGTGCACATGTAAATTTGGAAGGACTGGTACAAGGGTCAATCAGGGACGTATGGATCCCACTTGAAGGAGTGAGTTCTGGTGAATTAAGACTTAAAATAGAAGCAATTTGGGTGGAGAACCAAGAGGGATCAAAGGTATGCTTCTTTAATAGGAAAACAATGATTGTTTGAATAATGTGCTAAGCAGAATTTTTAACTCTGGCGTTCTTCTTCTAACAAGCCCTACTCCTTTGAAATGGACACAGAGTCCACCATCGGGCATGACGAATGGTTGGATTGAACTTGTTCTTATTGAAGCGAGGGATCTTATTGCTGCTGATCTTAGAGGGACAAGTGATCCTTTTGTGAGGGTAAACTATGGAAACTTAAAGAAAAGAACAAAGGTTAGAAACTTCATTCAAAATTCCTCTTGCGTGAACCAAACATCCTTACGATTTACAAGTTTTATTACCATCACATTATATCTTCTTATGGTGTTATACACTTATACTGGCATGACACAATTGATTGCTTACATAACTGTTATTATTTGTTTCATACTTGTAAGGCTTAATTTACTGTGGCATTATCTGGTAGGTTGTACACAAAACTGTCAACCCTCGTTGGGACCAGACCTTAGAGTTCCTAGATGATGGAAGTCCCCTGACATTGCATGTAAAGGACCATAATGCTTTACTACCCACATCAAGTATAGGTGAATGTGTTGTAGAATATCAAAGCCTTCCTCCGAACCAGACGTCAGACAAGTGGATACCTCTCCAAGGGGTGAAAAGTGGCGAGATCCACATCCAAATCACAAGAAAAGTTCCAGAGATTCAAACAAGACAATCTCCAGACTCTGTACCTTCTTTGACTAAATTACACCAGATTCCTAGCCAG

Protein sequence

>MS.gene05842.t1

YGNYQRKILEEDLNKKWNRIIVNTSPVTTLEQCEWLNLLLSQIWSNYFNPKLSTRLSAIVEKRLKLRKPRFIERVEVLEFSLGSRPPSLGLQGIRWSTSGDQRLLKMGFDWDTNEMSILMVAKLSVGTARIVINSLHIKGDLVVTPILDGKALLYSFVSTPEVRIGIAFGSGGSQSATELPGVSPWLVKLFTDTLVKTMVEPRRRCFSLPAVDLRKYAVGGTIYVSVISGNKLSRSCFKGRQQNGTSNGCLEENVSDKDLQTFVEVEAEELTRRTGVRFGSTPRWDTTFNMVLHDNTGIVRFNLYQCPPDSVKYDYLASCEIKMRHVEDDSTIVWAIGPDSGVIAKHAKLCGEEVEMLVPFEGDKSAELKVRIVVKEWQFSDGSHSLTNLHASPQKSLKGSSNLLSKTGRKLKITVVEAKDLDAKDRFGKFDPYIKLQYGKVVMKTKIAPPPTTPTAVWNDTFEVDENSGDEYLIVKCFSEEIFGDENIGSAHVNLEGLVQGSIRDVWIPLEGVSSGELRLKIEAIWVENQEGSKSPPSGMTNGWIELVLIEARDLIAADLRGTSDPFVRVNYGNLKKRTKVVHKTVNPRWDQTLEFLDDGSPLTLHVKDHNALLPTSSIGECVVEYQSLPPNQTSDKWIPLQGVKSGEIHIQITRKVPEIQTRQSPDSVPSLTKLHQIPSQ