Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061503.t1 | XP_013441908.1 | 71 | 404 | 24 | 1 | 1 | 311 | 62 | 465 | 5.60E-147 | 530.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061503.t1 | Q9AR73 | 33.1 | 408 | 172 | 6 | 1 | 311 | 61 | 464 | 3.0e-56 | 220.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061503.t1 | G8A0P3 | 71.0 | 404 | 24 | 1 | 1 | 311 | 62 | 465 | 4.0e-147 | 530.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059604 | MS.gene061503 | 0.864369 | 1.28E-64 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061503.t1 | MTR_6g488280 | 93.827 | 243 | 15 | 0 | 1 | 243 | 62 | 304 | 1.90e-166 | 471 |
| MS.gene061503.t1 | MTR_6g488280 | 86.765 | 68 | 9 | 0 | 244 | 311 | 398 | 465 | 1.52e-30 | 120 |
| MS.gene061503.t1 | MTR_0428s0010 | 93.827 | 243 | 15 | 0 | 1 | 243 | 62 | 304 | 1.90e-166 | 471 |
| MS.gene061503.t1 | MTR_0428s0010 | 86.765 | 68 | 9 | 0 | 244 | 311 | 398 | 465 | 1.52e-30 | 120 |
| MS.gene061503.t1 | MTR_6g023665 | 86.831 | 243 | 32 | 0 | 1 | 243 | 69 | 311 | 1.50e-153 | 439 |
| MS.gene061503.t1 | MTR_6g023665 | 88.235 | 68 | 8 | 0 | 244 | 311 | 405 | 472 | 1.33e-31 | 123 |
| MS.gene061503.t1 | MTR_8g006730 | 68.016 | 247 | 73 | 4 | 1 | 243 | 62 | 306 | 1.10e-112 | 334 |
| MS.gene061503.t1 | MTR_8g006730 | 74.242 | 66 | 17 | 0 | 244 | 309 | 400 | 465 | 5.99e-24 | 101 |
| MS.gene061503.t1 | MTR_8g006710 | 64.961 | 254 | 84 | 3 | 1 | 251 | 62 | 313 | 2.22e-110 | 328 |
| MS.gene061503.t1 | MTR_8g006710 | 66.176 | 68 | 23 | 0 | 244 | 311 | 399 | 466 | 5.56e-22 | 96.3 |
| MS.gene061503.t1 | MTR_8g465670 | 50.612 | 245 | 116 | 3 | 1 | 243 | 63 | 304 | 1.38e-78 | 247 |
| MS.gene061503.t1 | MTR_8g006220 | 50.612 | 245 | 116 | 3 | 1 | 243 | 62 | 303 | 2.02e-77 | 244 |
| MS.gene061503.t1 | MTR_8g006220 | 49.315 | 73 | 32 | 2 | 244 | 311 | 407 | 479 | 5.58e-12 | 66.6 |
| MS.gene061503.t1 | MTR_0078s0200 | 45.200 | 250 | 126 | 6 | 1 | 243 | 62 | 307 | 5.55e-64 | 204 |
| MS.gene061503.t1 | MTR_0184s0030 | 44.186 | 258 | 133 | 6 | 1 | 251 | 62 | 315 | 2.09e-62 | 205 |
| MS.gene061503.t1 | MTR_7g046490 | 41.254 | 303 | 164 | 7 | 6 | 304 | 67 | 359 | 4.51e-60 | 199 |
| MS.gene061503.t1 | MTR_8g009073 | 44.534 | 247 | 130 | 5 | 1 | 243 | 62 | 305 | 1.76e-58 | 194 |
| MS.gene061503.t1 | MTR_0184s0040 | 42.471 | 259 | 141 | 6 | 1 | 254 | 77 | 332 | 4.93e-58 | 194 |
| MS.gene061503.t1 | MTR_0078s0190 | 42.471 | 259 | 141 | 6 | 1 | 254 | 77 | 332 | 4.93e-58 | 194 |
| MS.gene061503.t1 | MTR_8g008990 | 43.725 | 247 | 132 | 5 | 1 | 243 | 62 | 305 | 3.71e-57 | 191 |
| MS.gene061503.t1 | MTR_8g008990 | 48.529 | 68 | 34 | 1 | 244 | 311 | 403 | 469 | 1.84e-13 | 70.9 |
| MS.gene061503.t1 | MTR_8g009050 | 43.725 | 247 | 132 | 6 | 1 | 243 | 62 | 305 | 5.43e-57 | 191 |
| MS.gene061503.t1 | MTR_8g009055 | 43.320 | 247 | 133 | 5 | 1 | 243 | 62 | 305 | 1.45e-56 | 189 |
| MS.gene061503.t1 | MTR_8g009055 | 50.000 | 60 | 30 | 0 | 252 | 311 | 408 | 467 | 2.53e-11 | 64.3 |
| MS.gene061503.t1 | MTR_1g019510 | 41.107 | 253 | 144 | 4 | 1 | 251 | 62 | 311 | 2.33e-56 | 189 |
| MS.gene061503.t1 | MTR_1g019510 | 48.529 | 68 | 34 | 1 | 244 | 311 | 398 | 464 | 9.56e-13 | 68.9 |
| MS.gene061503.t1 | MTR_8g077590 | 44.177 | 249 | 128 | 6 | 1 | 243 | 65 | 308 | 7.70e-56 | 188 |
| MS.gene061503.t1 | MTR_7g047030 | 42.339 | 248 | 135 | 6 | 1 | 243 | 62 | 306 | 1.47e-55 | 187 |
| MS.gene061503.t1 | MTR_7g047270 | 42.339 | 248 | 135 | 6 | 1 | 243 | 62 | 306 | 1.47e-55 | 187 |
| MS.gene061503.t1 | MTR_8g009067 | 45.082 | 244 | 127 | 5 | 4 | 243 | 65 | 305 | 2.51e-55 | 186 |
| MS.gene061503.t1 | MTR_8g009063 | 44.082 | 245 | 130 | 5 | 1 | 241 | 69 | 310 | 3.06e-55 | 186 |
| MS.gene061503.t1 | MTR_8g009063 | 48.529 | 68 | 34 | 1 | 244 | 311 | 408 | 474 | 8.68e-12 | 65.9 |
| MS.gene061503.t1 | MTR_8g027885 | 40.927 | 259 | 143 | 7 | 6 | 262 | 77 | 327 | 5.41e-55 | 186 |
| MS.gene061503.t1 | MTR_8g027885 | 47.059 | 68 | 35 | 1 | 244 | 311 | 407 | 473 | 2.71e-12 | 67.4 |
| MS.gene061503.t1 | MTR_0078s0010 | 41.833 | 251 | 132 | 6 | 1 | 243 | 62 | 306 | 1.03e-54 | 185 |
| MS.gene061503.t1 | MTR_7g117170 | 43.254 | 252 | 126 | 6 | 1 | 243 | 71 | 314 | 2.06e-53 | 182 |
| MS.gene061503.t1 | MTR_0078s0060 | 43.320 | 247 | 133 | 6 | 1 | 243 | 62 | 305 | 6.04e-53 | 180 |
| MS.gene061503.t1 | MTR_8g027870 | 39.922 | 258 | 147 | 6 | 6 | 262 | 77 | 327 | 1.68e-52 | 179 |
| MS.gene061503.t1 | MTR_8g027870 | 47.059 | 68 | 35 | 1 | 244 | 311 | 407 | 473 | 2.56e-12 | 67.4 |
| MS.gene061503.t1 | MTR_8g006270 | 38.376 | 271 | 155 | 6 | 5 | 271 | 68 | 330 | 1.29e-51 | 177 |
| MS.gene061503.t1 | MTR_8g008970 | 42.857 | 252 | 137 | 5 | 4 | 251 | 65 | 313 | 2.68e-51 | 181 |
| MS.gene061503.t1 | MTR_8g008970 | 47.573 | 103 | 50 | 2 | 130 | 228 | 527 | 629 | 2.04e-18 | 86.3 |
| MS.gene061503.t1 | MTR_8g008970 | 46.269 | 67 | 35 | 1 | 244 | 310 | 399 | 464 | 7.17e-11 | 63.5 |
| MS.gene061503.t1 | MTR_8g012745 | 42.629 | 251 | 132 | 6 | 1 | 243 | 62 | 308 | 4.65e-51 | 175 |
| MS.gene061503.t1 | MTR_6g005600 | 39.431 | 246 | 143 | 4 | 1 | 243 | 63 | 305 | 3.38e-50 | 173 |
| MS.gene061503.t1 | MTR_8g012650 | 41.935 | 248 | 132 | 6 | 4 | 243 | 65 | 308 | 5.30e-49 | 170 |
| MS.gene061503.t1 | MTR_8g012635 | 40.637 | 251 | 137 | 6 | 1 | 243 | 62 | 308 | 1.51e-48 | 169 |
| MS.gene061503.t1 | MTR_8g006230 | 44.279 | 201 | 102 | 6 | 48 | 243 | 52 | 247 | 2.06e-47 | 160 |
| MS.gene061503.t1 | MTR_8g006260 | 40.081 | 247 | 134 | 7 | 6 | 243 | 69 | 310 | 4.37e-47 | 165 |
| MS.gene061503.t1 | MTR_8g006260 | 54.412 | 68 | 30 | 1 | 244 | 311 | 404 | 470 | 1.35e-12 | 68.6 |
| MS.gene061503.t1 | MTR_8g009067 | 45.545 | 202 | 93 | 5 | 59 | 251 | 2 | 195 | 9.83e-45 | 155 |
| MS.gene061503.t1 | MTR_8g009073 | 43.850 | 187 | 98 | 5 | 69 | 251 | 1 | 184 | 2.96e-40 | 144 |
| MS.gene061503.t1 | MTR_6g033625 | 31.801 | 261 | 164 | 5 | 4 | 253 | 66 | 323 | 5.70e-35 | 132 |
| MS.gene061503.t1 | MTR_5g019580 | 31.679 | 262 | 146 | 8 | 1 | 243 | 66 | 313 | 1.32e-34 | 131 |
| MS.gene061503.t1 | MTR_3g009510 | 30.224 | 268 | 171 | 7 | 1 | 255 | 64 | 328 | 6.30e-33 | 127 |
| MS.gene061503.t1 | MTR_8g074550 | 34.127 | 252 | 148 | 8 | 2 | 242 | 65 | 309 | 2.74e-32 | 125 |
| MS.gene061503.t1 | MTR_6g033615 | 30.328 | 244 | 149 | 5 | 34 | 268 | 96 | 327 | 4.33e-32 | 124 |
| MS.gene061503.t1 | MTR_6g033660 | 32.243 | 214 | 135 | 4 | 35 | 242 | 102 | 311 | 4.20e-31 | 122 |
| MS.gene061503.t1 | MTR_6g033675 | 32.701 | 211 | 132 | 5 | 39 | 242 | 105 | 312 | 2.94e-29 | 116 |
| MS.gene061503.t1 | MTR_5g090630 | 31.873 | 251 | 151 | 9 | 1 | 243 | 62 | 300 | 1.39e-28 | 114 |
| MS.gene061503.t1 | MTR_6g033725 | 28.571 | 280 | 179 | 7 | 1 | 268 | 68 | 338 | 3.40e-28 | 114 |
| MS.gene061503.t1 | MTR_8g012630 | 29.462 | 353 | 193 | 10 | 1 | 303 | 62 | 408 | 1.31e-27 | 111 |
| MS.gene061503.t1 | MTR_5g070090 | 30.451 | 266 | 160 | 8 | 7 | 253 | 67 | 326 | 6.65e-27 | 110 |
| MS.gene061503.t1 | MTR_5g090670 | 30.000 | 260 | 159 | 9 | 1 | 245 | 62 | 313 | 9.18e-27 | 109 |
| MS.gene061503.t1 | MTR_6g005660 | 34.574 | 188 | 117 | 4 | 1 | 185 | 63 | 247 | 1.42e-26 | 105 |
| MS.gene061503.t1 | MTR_8g012730 | 40.994 | 161 | 76 | 4 | 83 | 243 | 4 | 145 | 3.09e-26 | 105 |
| MS.gene061503.t1 | MTR_5g098930 | 33.495 | 206 | 122 | 7 | 48 | 243 | 102 | 302 | 9.39e-26 | 107 |
| MS.gene061503.t1 | MTR_5g090700 | 28.405 | 257 | 158 | 9 | 14 | 251 | 74 | 323 | 9.94e-26 | 107 |
| MS.gene061503.t1 | MTR_5g070040 | 29.457 | 258 | 153 | 10 | 7 | 243 | 67 | 316 | 2.41e-25 | 105 |
| MS.gene061503.t1 | MTR_5g019580 | 31.496 | 254 | 129 | 10 | 1 | 243 | 118 | 337 | 2.53e-25 | 105 |
| MS.gene061503.t1 | MTR_5g090600 | 30.469 | 256 | 163 | 8 | 14 | 259 | 72 | 322 | 4.91e-25 | 104 |
| MS.gene061503.t1 | MTR_2g046750 | 34.653 | 202 | 116 | 5 | 48 | 243 | 117 | 308 | 5.96e-25 | 104 |
| MS.gene061503.t1 | MTR_2g040530 | 33.333 | 216 | 128 | 6 | 35 | 243 | 101 | 307 | 6.15e-25 | 104 |
| MS.gene061503.t1 | MTR_5g090660 | 29.876 | 241 | 153 | 7 | 14 | 243 | 72 | 307 | 4.11e-24 | 102 |
| MS.gene061503.t1 | MTR_5g090580 | 30.859 | 256 | 156 | 10 | 1 | 243 | 62 | 309 | 9.59e-24 | 101 |
| MS.gene061503.t1 | MTR_5g090620 | 29.572 | 257 | 157 | 10 | 6 | 249 | 67 | 312 | 1.00e-23 | 101 |
| MS.gene061503.t1 | MTR_2g046820 | 33.971 | 209 | 123 | 6 | 43 | 243 | 104 | 305 | 1.38e-23 | 100 |
| MS.gene061503.t1 | MTR_4g082810 | 28.814 | 236 | 158 | 5 | 63 | 289 | 125 | 359 | 1.96e-19 | 88.2 |
| MS.gene061503.t1 | MTR_5g090610 | 27.668 | 253 | 154 | 9 | 1 | 243 | 62 | 295 | 3.10e-19 | 88.2 |
| MS.gene061503.t1 | MTR_5g464810 | 29.091 | 275 | 148 | 11 | 6 | 241 | 66 | 332 | 4.65e-19 | 87.8 |
| MS.gene061503.t1 | MTR_5g064240 | 29.091 | 275 | 148 | 11 | 6 | 241 | 66 | 332 | 4.65e-19 | 87.8 |
| MS.gene061503.t1 | MTR_5g464760 | 30.045 | 223 | 120 | 9 | 62 | 253 | 134 | 351 | 8.73e-19 | 87.0 |
| MS.gene061503.t1 | MTR_1g019520 | 65.517 | 58 | 20 | 0 | 194 | 251 | 3 | 60 | 1.28e-18 | 83.2 |
| MS.gene061503.t1 | MTR_1g019520 | 50.000 | 68 | 33 | 1 | 244 | 311 | 147 | 213 | 1.74e-12 | 65.9 |
| MS.gene061503.t1 | MTR_0036s0220 | 28.205 | 234 | 130 | 9 | 40 | 241 | 105 | 332 | 1.86e-17 | 82.8 |
| MS.gene061503.t1 | MTR_7g013180 | 26.172 | 256 | 152 | 6 | 9 | 241 | 63 | 304 | 3.19e-17 | 82.0 |
| MS.gene061503.t1 | MTR_6g078320 | 25.342 | 292 | 185 | 9 | 6 | 270 | 69 | 354 | 3.41e-17 | 82.0 |
| MS.gene061503.t1 | MTR_2g008210 | 28.000 | 300 | 168 | 13 | 6 | 268 | 64 | 352 | 3.46e-17 | 82.0 |
| MS.gene061503.t1 | MTR_5g090690 | 27.273 | 242 | 133 | 6 | 14 | 244 | 31 | 240 | 4.06e-17 | 81.3 |
| MS.gene061503.t1 | MTR_3g069710 | 31.754 | 211 | 120 | 9 | 52 | 247 | 108 | 309 | 7.44e-17 | 81.3 |
| MS.gene061503.t1 | MTR_6g038240 | 29.767 | 215 | 115 | 9 | 62 | 254 | 124 | 324 | 7.70e-17 | 80.9 |
| MS.gene061503.t1 | MTR_6g038230 | 32.051 | 234 | 121 | 10 | 44 | 254 | 106 | 324 | 1.13e-16 | 80.5 |
| MS.gene061503.t1 | MTR_3g069690 | 29.665 | 209 | 132 | 5 | 43 | 241 | 98 | 301 | 1.36e-16 | 80.1 |
| MS.gene061503.t1 | MTR_4g008630 | 27.511 | 229 | 140 | 7 | 48 | 272 | 125 | 331 | 2.07e-16 | 79.7 |
| MS.gene061503.t1 | MTR_6g038300 | 36.220 | 127 | 61 | 4 | 133 | 241 | 186 | 310 | 2.15e-16 | 79.7 |
| MS.gene061503.t1 | MTR_5g031860 | 28.516 | 256 | 143 | 10 | 30 | 261 | 101 | 340 | 3.22e-16 | 79.3 |
| MS.gene061503.t1 | MTR_7g013200 | 26.459 | 257 | 148 | 8 | 9 | 241 | 57 | 296 | 5.56e-16 | 78.6 |
| MS.gene061503.t1 | MTR_5g035560 | 28.862 | 246 | 123 | 11 | 44 | 257 | 102 | 327 | 8.37e-16 | 78.2 |
| MS.gene061503.t1 | MTR_6g038200 | 30.000 | 220 | 112 | 8 | 60 | 254 | 122 | 324 | 4.51e-15 | 75.9 |
| MS.gene061503.t1 | MTR_5g090650 | 25.301 | 249 | 151 | 10 | 6 | 243 | 52 | 276 | 4.72e-15 | 74.7 |
| MS.gene061503.t1 | MTR_6g013680 | 30.000 | 190 | 90 | 7 | 149 | 299 | 178 | 363 | 5.27e-15 | 75.1 |
| MS.gene061503.t1 | MTR_4g485630 | 29.075 | 227 | 130 | 6 | 34 | 241 | 99 | 313 | 5.83e-15 | 75.5 |
| MS.gene061503.t1 | MTR_8g059425 | 27.500 | 240 | 144 | 7 | 35 | 250 | 108 | 341 | 9.62e-15 | 74.7 |
| MS.gene061503.t1 | MTR_2g098430 | 24.701 | 251 | 162 | 9 | 10 | 245 | 79 | 317 | 9.65e-15 | 74.7 |
| MS.gene061503.t1 | MTR_6g014290 | 27.313 | 227 | 138 | 7 | 46 | 250 | 120 | 341 | 9.86e-15 | 74.7 |
| MS.gene061503.t1 | MTR_5g035580 | 29.752 | 242 | 126 | 10 | 44 | 257 | 104 | 329 | 1.35e-14 | 74.3 |
| MS.gene061503.t1 | MTR_7g013260 | 44.792 | 96 | 41 | 3 | 151 | 241 | 209 | 297 | 1.41e-14 | 74.3 |
| MS.gene061503.t1 | MTR_7g013240 | 44.792 | 96 | 41 | 3 | 151 | 241 | 208 | 296 | 1.47e-14 | 74.3 |
| MS.gene061503.t1 | MTR_3g008010 | 27.619 | 210 | 128 | 6 | 63 | 250 | 134 | 341 | 1.54e-14 | 74.3 |
| MS.gene061503.t1 | MTR_5g058320 | 26.616 | 263 | 170 | 6 | 10 | 250 | 67 | 328 | 2.36e-14 | 73.6 |
| MS.gene061503.t1 | MTR_6g052375 | 34.307 | 137 | 74 | 6 | 108 | 232 | 27 | 159 | 5.32e-14 | 71.6 |
| MS.gene061503.t1 | MTR_4g485640 | 26.423 | 246 | 158 | 7 | 9 | 240 | 266 | 502 | 5.81e-14 | 72.8 |
| MS.gene061503.t1 | MTR_4g082820 | 28.788 | 264 | 143 | 10 | 7 | 241 | 61 | 308 | 6.21e-14 | 72.4 |
| MS.gene061503.t1 | MTR_5g031840 | 27.442 | 215 | 137 | 6 | 56 | 253 | 118 | 330 | 8.30e-14 | 72.0 |
| MS.gene061503.t1 | MTR_8g090095 | 33.594 | 128 | 79 | 2 | 148 | 271 | 220 | 345 | 9.35e-14 | 72.0 |
| MS.gene061503.t1 | MTR_4g095008 | 27.311 | 238 | 143 | 8 | 22 | 241 | 85 | 310 | 1.18e-13 | 71.6 |
| MS.gene061503.t1 | MTR_6g014186 | 24.621 | 264 | 143 | 8 | 88 | 299 | 168 | 427 | 1.23e-13 | 71.2 |
| MS.gene061503.t1 | MTR_7g013220 | 25.681 | 257 | 150 | 7 | 9 | 241 | 68 | 307 | 1.28e-13 | 71.2 |
| MS.gene061503.t1 | MTR_7g080935 | 37.963 | 108 | 53 | 3 | 148 | 242 | 203 | 309 | 1.30e-13 | 71.2 |
| MS.gene061503.t1 | MTR_7g070940 | 26.400 | 250 | 154 | 6 | 8 | 241 | 75 | 310 | 1.55e-13 | 71.2 |
| MS.gene061503.t1 | MTR_4g031800 | 29.167 | 144 | 88 | 3 | 113 | 242 | 168 | 311 | 2.03e-13 | 70.9 |
| MS.gene061503.t1 | MTR_6g013960 | 31.667 | 180 | 99 | 10 | 88 | 250 | 171 | 343 | 2.05e-13 | 70.9 |
| MS.gene061503.t1 | MTR_4g064987 | 37.209 | 129 | 72 | 5 | 119 | 241 | 178 | 303 | 2.25e-13 | 70.5 |
| MS.gene061503.t1 | MTR_4g064987 | 37.209 | 129 | 72 | 5 | 119 | 241 | 172 | 297 | 2.40e-13 | 70.5 |
| MS.gene061503.t1 | MTR_6g014050 | 29.379 | 177 | 107 | 7 | 88 | 250 | 172 | 344 | 3.00e-13 | 70.5 |
| MS.gene061503.t1 | MTR_6g011340 | 25.088 | 283 | 172 | 9 | 2 | 250 | 67 | 343 | 3.05e-13 | 70.5 |
| MS.gene061503.t1 | MTR_6g014250 | 27.632 | 228 | 136 | 9 | 46 | 250 | 120 | 341 | 4.11e-13 | 70.1 |
| MS.gene061503.t1 | MTR_5g087620 | 25.573 | 262 | 151 | 10 | 14 | 243 | 84 | 333 | 4.28e-13 | 70.1 |
| MS.gene061503.t1 | MTR_3g009500 | 28.000 | 150 | 97 | 4 | 43 | 183 | 107 | 254 | 4.66e-13 | 68.6 |
| MS.gene061503.t1 | MTR_1g029540 | 25.000 | 272 | 174 | 11 | 7 | 272 | 81 | 328 | 4.95e-13 | 69.7 |
| MS.gene061503.t1 | MTR_6g014220 | 25.090 | 279 | 167 | 11 | 6 | 246 | 63 | 337 | 6.37e-13 | 69.3 |
| MS.gene061503.t1 | MTR_8g068330 | 27.037 | 270 | 167 | 9 | 1 | 249 | 60 | 320 | 7.69e-13 | 68.9 |
| MS.gene061503.t1 | MTR_4g094220 | 25.240 | 313 | 164 | 14 | 6 | 267 | 60 | 353 | 7.89e-13 | 68.9 |
| MS.gene061503.t1 | MTR_3g479470 | 26.056 | 284 | 160 | 10 | 7 | 249 | 67 | 341 | 9.79e-13 | 68.9 |
| MS.gene061503.t1 | MTR_7g102450 | 30.500 | 200 | 107 | 6 | 100 | 287 | 156 | 335 | 1.10e-12 | 68.6 |
| MS.gene061503.t1 | MTR_4g485590 | 29.801 | 151 | 85 | 4 | 112 | 241 | 143 | 293 | 1.12e-12 | 68.6 |
| MS.gene061503.t1 | MTR_6g013990 | 37.500 | 120 | 59 | 4 | 139 | 246 | 222 | 337 | 1.18e-12 | 68.6 |
| MS.gene061503.t1 | MTR_6g014187 | 27.568 | 185 | 116 | 6 | 88 | 258 | 171 | 351 | 1.23e-12 | 68.6 |
| MS.gene061503.t1 | MTR_6g038220 | 27.941 | 204 | 106 | 7 | 62 | 241 | 123 | 309 | 1.45e-12 | 68.2 |
| MS.gene061503.t1 | MTR_5g031830 | 25.468 | 267 | 161 | 12 | 30 | 272 | 101 | 353 | 1.48e-12 | 68.2 |
| MS.gene061503.t1 | MTR_0536s0020 | 34.959 | 123 | 62 | 5 | 131 | 240 | 193 | 310 | 1.62e-12 | 68.2 |
| MS.gene061503.t1 | MTR_6g013435 | 25.847 | 236 | 129 | 7 | 109 | 299 | 61 | 295 | 1.62e-12 | 67.4 |
| MS.gene061503.t1 | MTR_8g083290 | 26.126 | 222 | 128 | 6 | 46 | 241 | 102 | 313 | 1.75e-12 | 68.2 |
| MS.gene061503.t1 | MTR_8g066610 | 25.738 | 237 | 139 | 5 | 31 | 242 | 100 | 324 | 2.13e-12 | 67.8 |
| MS.gene061503.t1 | MTR_7g011470 | 31.126 | 151 | 89 | 5 | 109 | 246 | 177 | 325 | 2.57e-12 | 67.4 |
| MS.gene061503.t1 | MTR_6g014200 | 31.210 | 157 | 81 | 6 | 109 | 246 | 188 | 336 | 3.28e-12 | 67.0 |
| MS.gene061503.t1 | MTR_7g011470 | 31.250 | 144 | 85 | 4 | 116 | 246 | 179 | 321 | 3.75e-12 | 67.0 |
| MS.gene061503.t1 | MTR_6g013450 | 30.405 | 148 | 89 | 3 | 116 | 250 | 198 | 344 | 4.24e-12 | 67.0 |
| MS.gene061503.t1 | MTR_2g008220 | 27.273 | 253 | 161 | 8 | 6 | 241 | 71 | 317 | 5.32e-12 | 66.6 |
| MS.gene061503.t1 | MTR_5g039900 | 23.577 | 246 | 169 | 5 | 9 | 241 | 84 | 323 | 1.11e-11 | 65.5 |
| MS.gene061503.t1 | MTR_8g083280 | 35.417 | 96 | 58 | 1 | 150 | 241 | 221 | 316 | 1.11e-11 | 65.5 |
| MS.gene061503.t1 | MTR_4g485620 | 24.521 | 261 | 159 | 6 | 34 | 272 | 83 | 327 | 1.14e-11 | 65.5 |
| MS.gene061503.t1 | MTR_3g479490 | 27.273 | 286 | 141 | 14 | 6 | 241 | 59 | 327 | 1.30e-11 | 65.5 |
| MS.gene061503.t1 | MTR_8g068340 | 27.624 | 181 | 100 | 6 | 131 | 308 | 207 | 359 | 1.39e-11 | 65.1 |
| MS.gene061503.t1 | MTR_6g013920 | 27.879 | 165 | 98 | 5 | 109 | 257 | 190 | 349 | 1.43e-11 | 65.1 |
| MS.gene061503.t1 | MTR_7g080940 | 33.333 | 120 | 65 | 4 | 148 | 253 | 203 | 321 | 1.53e-11 | 65.1 |
| MS.gene061503.t1 | MTR_7g102560 | 31.746 | 126 | 72 | 3 | 130 | 241 | 194 | 319 | 1.71e-11 | 65.1 |
| MS.gene061503.t1 | MTR_8g064870 | 32.039 | 103 | 59 | 3 | 150 | 242 | 216 | 317 | 1.79e-11 | 65.1 |
| MS.gene061503.t1 | MTR_6g014040 | 26.552 | 290 | 166 | 10 | 3 | 250 | 60 | 344 | 1.95e-11 | 64.7 |
| MS.gene061503.t1 | MTR_6g013900 | 29.545 | 176 | 100 | 7 | 88 | 246 | 170 | 338 | 2.27e-11 | 64.7 |
| MS.gene061503.t1 | MTR_7g070870 | 34.783 | 115 | 68 | 3 | 131 | 241 | 207 | 318 | 2.31e-11 | 64.7 |
| MS.gene061503.t1 | MTR_2g008226 | 36.364 | 110 | 65 | 2 | 137 | 241 | 213 | 322 | 2.40e-11 | 64.7 |
| MS.gene061503.t1 | MTR_6g014150 | 25.359 | 209 | 133 | 5 | 63 | 250 | 134 | 340 | 2.44e-11 | 64.7 |
| MS.gene061503.t1 | MTR_5g016480 | 29.032 | 155 | 94 | 5 | 100 | 241 | 168 | 319 | 2.71e-11 | 64.3 |
| MS.gene061503.t1 | MTR_5g072860 | 35.185 | 108 | 62 | 1 | 158 | 257 | 230 | 337 | 2.88e-11 | 64.3 |
| MS.gene061503.t1 | MTR_5g040030 | 29.677 | 155 | 95 | 3 | 100 | 241 | 172 | 325 | 3.54e-11 | 63.9 |
| MS.gene061503.t1 | MTR_1g032490 | 25.410 | 244 | 140 | 9 | 23 | 243 | 95 | 319 | 4.26e-11 | 63.9 |
| MS.gene061503.t1 | MTR_6g014170 | 29.204 | 226 | 118 | 11 | 48 | 250 | 119 | 325 | 4.44e-11 | 63.9 |
| MS.gene061503.t1 | MTR_8g071070 | 29.327 | 208 | 128 | 9 | 49 | 243 | 117 | 318 | 6.53e-11 | 63.2 |
| MS.gene061503.t1 | MTR_8g064880 | 24.658 | 219 | 145 | 6 | 44 | 249 | 115 | 326 | 6.61e-11 | 63.2 |
| MS.gene061503.t1 | MTR_6g013440 | 30.128 | 156 | 84 | 6 | 109 | 246 | 192 | 340 | 6.85e-11 | 63.2 |
| MS.gene061503.t1 | MTR_1g062380 | 28.994 | 169 | 98 | 6 | 90 | 241 | 165 | 328 | 7.44e-11 | 63.2 |
| MS.gene061503.t1 | MTR_7g055710 | 25.591 | 254 | 160 | 8 | 8 | 241 | 77 | 321 | 8.57e-11 | 62.8 |
| MS.gene061503.t1 | MTR_3g479520 | 25.267 | 281 | 163 | 11 | 6 | 246 | 68 | 341 | 9.71e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061503.t1 | AT4G01070 | 41.667 | 252 | 137 | 7 | 6 | 251 | 68 | 315 | 6.85e-51 | 172 |
| MS.gene061503.t1 | AT4G01070 | 41.667 | 252 | 137 | 7 | 6 | 251 | 68 | 315 | 4.28e-50 | 173 |
| MS.gene061503.t1 | AT4G01070 | 48.611 | 72 | 34 | 2 | 240 | 311 | 400 | 468 | 7.87e-13 | 69.3 |
| MS.gene061503.t1 | AT1G01390 | 38.645 | 251 | 146 | 6 | 6 | 251 | 68 | 315 | 1.21e-47 | 166 |
| MS.gene061503.t1 | AT1G01390 | 38.645 | 251 | 146 | 6 | 6 | 251 | 85 | 332 | 1.43e-47 | 167 |
| MS.gene061503.t1 | AT1G01420 | 38.492 | 252 | 145 | 7 | 6 | 251 | 71 | 318 | 3.97e-47 | 165 |
| MS.gene061503.t1 | AT1G01420 | 38.492 | 252 | 145 | 7 | 6 | 251 | 68 | 315 | 4.22e-47 | 165 |
| MS.gene061503.t1 | AT3G16520 | 35.747 | 221 | 135 | 5 | 27 | 243 | 92 | 309 | 1.97e-34 | 130 |
| MS.gene061503.t1 | AT3G16520 | 35.747 | 221 | 135 | 5 | 27 | 243 | 92 | 309 | 2.05e-34 | 130 |
| MS.gene061503.t1 | AT3G16520 | 35.747 | 221 | 135 | 5 | 27 | 243 | 92 | 309 | 2.44e-34 | 130 |
| MS.gene061503.t1 | AT3G50740 | 32.510 | 243 | 126 | 8 | 21 | 244 | 85 | 308 | 3.84e-32 | 125 |
| MS.gene061503.t1 | AT3G21790 | 31.839 | 223 | 139 | 4 | 28 | 241 | 94 | 312 | 3.89e-31 | 122 |
| MS.gene061503.t1 | AT5G26310 | 30.894 | 246 | 157 | 7 | 6 | 244 | 64 | 303 | 5.01e-31 | 121 |
| MS.gene061503.t1 | AT5G66690 | 32.645 | 242 | 125 | 9 | 22 | 244 | 81 | 303 | 5.32e-31 | 121 |
| MS.gene061503.t1 | AT3G21780 | 32.883 | 222 | 132 | 5 | 33 | 241 | 86 | 303 | 3.02e-30 | 119 |
| MS.gene061503.t1 | AT1G07250 | 29.502 | 261 | 154 | 9 | 7 | 241 | 63 | 319 | 5.29e-28 | 113 |
| MS.gene061503.t1 | AT2G18570 | 31.890 | 254 | 151 | 11 | 2 | 243 | 63 | 306 | 6.60e-28 | 112 |
| MS.gene061503.t1 | AT3G21800 | 32.000 | 225 | 139 | 5 | 27 | 241 | 89 | 309 | 8.15e-28 | 112 |
| MS.gene061503.t1 | AT4G36770 | 30.534 | 262 | 149 | 9 | 9 | 254 | 71 | 315 | 8.84e-27 | 109 |
| MS.gene061503.t1 | AT2G18560 | 32.273 | 220 | 127 | 7 | 35 | 243 | 8 | 216 | 1.66e-26 | 107 |
| MS.gene061503.t1 | AT2G29730 | 30.088 | 226 | 144 | 5 | 27 | 241 | 90 | 312 | 2.28e-26 | 108 |
| MS.gene061503.t1 | AT3G21750 | 32.057 | 209 | 130 | 5 | 41 | 241 | 97 | 301 | 3.79e-26 | 108 |
| MS.gene061503.t1 | AT4G15260 | 30.732 | 205 | 131 | 4 | 55 | 251 | 1 | 202 | 3.79e-26 | 106 |
| MS.gene061503.t1 | AT1G07260 | 28.870 | 239 | 151 | 6 | 29 | 252 | 95 | 329 | 1.90e-25 | 106 |
| MS.gene061503.t1 | AT2G29740 | 31.878 | 229 | 135 | 7 | 28 | 241 | 99 | 321 | 2.33e-25 | 105 |
| MS.gene061503.t1 | AT1G07240 | 29.915 | 234 | 144 | 6 | 28 | 245 | 93 | 322 | 9.36e-25 | 104 |
| MS.gene061503.t1 | AT2G29710 | 30.222 | 225 | 143 | 5 | 28 | 241 | 90 | 311 | 1.23e-24 | 103 |
| MS.gene061503.t1 | AT2G29750 | 29.151 | 271 | 155 | 10 | 7 | 251 | 68 | 327 | 1.95e-24 | 103 |
| MS.gene061503.t1 | AT3G21760 | 29.046 | 241 | 148 | 7 | 15 | 241 | 84 | 315 | 7.44e-23 | 98.6 |
| MS.gene061503.t1 | AT4G15280 | 30.348 | 201 | 131 | 4 | 47 | 241 | 111 | 308 | 1.22e-22 | 98.2 |
| MS.gene061503.t1 | AT4G15280 | 30.348 | 201 | 131 | 4 | 47 | 241 | 143 | 340 | 1.36e-22 | 98.2 |
| MS.gene061503.t1 | AT4G34135 | 29.150 | 247 | 141 | 7 | 25 | 250 | 102 | 335 | 1.12e-20 | 91.3 |
| MS.gene061503.t1 | AT4G34131 | 27.203 | 261 | 155 | 7 | 31 | 272 | 109 | 353 | 1.17e-20 | 92.4 |
| MS.gene061503.t1 | AT4G34135 | 29.832 | 238 | 133 | 7 | 25 | 241 | 102 | 326 | 2.34e-20 | 91.7 |
| MS.gene061503.t1 | AT2G15480 | 26.957 | 230 | 138 | 6 | 30 | 241 | 108 | 325 | 5.77e-17 | 81.6 |
| MS.gene061503.t1 | AT2G15480 | 26.957 | 230 | 138 | 6 | 30 | 241 | 108 | 325 | 6.01e-17 | 81.6 |
| MS.gene061503.t1 | AT1G05675 | 30.315 | 254 | 143 | 11 | 8 | 241 | 68 | 307 | 1.15e-16 | 80.5 |
| MS.gene061503.t1 | AT2G36800 | 24.901 | 253 | 167 | 7 | 8 | 242 | 78 | 325 | 5.11e-16 | 78.6 |
| MS.gene061503.t1 | AT2G36780 | 27.755 | 245 | 151 | 9 | 17 | 242 | 89 | 326 | 1.23e-15 | 77.8 |
| MS.gene061503.t1 | AT3G46670 | 33.032 | 221 | 132 | 9 | 42 | 253 | 99 | 312 | 1.24e-15 | 77.4 |
| MS.gene061503.t1 | AT1G22340 | 27.273 | 231 | 141 | 7 | 62 | 270 | 134 | 359 | 2.93e-15 | 76.6 |
| MS.gene061503.t1 | AT3G55710 | 25.957 | 235 | 156 | 6 | 30 | 254 | 93 | 319 | 3.88e-15 | 75.9 |
| MS.gene061503.t1 | AT2G15490 | 26.400 | 250 | 148 | 7 | 13 | 240 | 86 | 321 | 4.39e-15 | 75.9 |
| MS.gene061503.t1 | AT2G15490 | 26.400 | 250 | 148 | 7 | 13 | 240 | 86 | 321 | 4.44e-15 | 75.9 |
| MS.gene061503.t1 | AT5G37950 | 30.476 | 210 | 123 | 8 | 42 | 241 | 77 | 273 | 4.65e-15 | 75.1 |
| MS.gene061503.t1 | AT2G36770 | 26.446 | 242 | 158 | 8 | 17 | 242 | 89 | 326 | 5.05e-15 | 75.9 |
| MS.gene061503.t1 | AT3G55700 | 25.397 | 252 | 162 | 8 | 12 | 247 | 67 | 308 | 1.08e-14 | 74.7 |
| MS.gene061503.t1 | AT5G37950 | 30.660 | 212 | 126 | 8 | 42 | 241 | 77 | 279 | 1.15e-14 | 73.9 |
| MS.gene061503.t1 | AT3G46650 | 28.342 | 187 | 104 | 6 | 63 | 242 | 123 | 286 | 1.46e-14 | 74.3 |
| MS.gene061503.t1 | AT1G22360 | 27.536 | 276 | 153 | 10 | 6 | 241 | 63 | 331 | 1.48e-14 | 74.3 |
| MS.gene061503.t1 | AT1G22360 | 27.536 | 276 | 153 | 10 | 6 | 241 | 63 | 331 | 1.66e-14 | 74.3 |
| MS.gene061503.t1 | AT5G38010 | 32.292 | 192 | 113 | 6 | 60 | 241 | 123 | 307 | 1.74e-14 | 73.9 |
| MS.gene061503.t1 | AT1G05680 | 28.287 | 251 | 146 | 11 | 11 | 241 | 71 | 307 | 2.43e-14 | 73.6 |
| MS.gene061503.t1 | AT3G46690 | 28.947 | 190 | 115 | 4 | 63 | 241 | 122 | 302 | 2.76e-14 | 73.6 |
| MS.gene061503.t1 | AT5G59590 | 30.526 | 190 | 117 | 6 | 60 | 241 | 120 | 302 | 4.87e-14 | 72.8 |
| MS.gene061503.t1 | AT1G10400 | 31.250 | 192 | 98 | 8 | 100 | 262 | 166 | 352 | 5.29e-14 | 72.8 |
| MS.gene061503.t1 | AT1G22370 | 35.514 | 107 | 54 | 3 | 149 | 241 | 54 | 159 | 6.61e-14 | 71.6 |
| MS.gene061503.t1 | AT5G12890 | 26.794 | 209 | 138 | 5 | 49 | 249 | 127 | 328 | 1.61e-13 | 71.2 |
| MS.gene061503.t1 | AT2G36750 | 25.991 | 227 | 141 | 8 | 34 | 242 | 104 | 321 | 1.70e-13 | 71.2 |
| MS.gene061503.t1 | AT1G22370 | 35.514 | 107 | 54 | 3 | 149 | 241 | 224 | 329 | 2.13e-13 | 70.9 |
| MS.gene061503.t1 | AT1G22400 | 30.000 | 210 | 109 | 9 | 62 | 241 | 134 | 335 | 2.46e-13 | 70.9 |
| MS.gene061503.t1 | AT2G36970 | 24.885 | 217 | 148 | 7 | 37 | 241 | 109 | 322 | 3.13e-13 | 70.5 |
| MS.gene061503.t1 | AT2G31750 | 37.963 | 108 | 51 | 3 | 148 | 241 | 202 | 307 | 3.34e-13 | 70.1 |
| MS.gene061503.t1 | AT5G03490 | 28.095 | 210 | 119 | 6 | 49 | 241 | 125 | 319 | 3.55e-13 | 70.1 |
| MS.gene061503.t1 | AT2G31750 | 37.963 | 108 | 51 | 3 | 148 | 241 | 202 | 307 | 3.79e-13 | 70.1 |
| MS.gene061503.t1 | AT1G22380 | 26.809 | 235 | 136 | 9 | 62 | 270 | 134 | 358 | 5.23e-13 | 69.7 |
| MS.gene061503.t1 | AT5G59580 | 29.843 | 191 | 117 | 7 | 60 | 241 | 118 | 300 | 6.36e-13 | 69.3 |
| MS.gene061503.t1 | AT5G38040 | 28.804 | 184 | 120 | 5 | 65 | 241 | 124 | 303 | 7.66e-13 | 68.9 |
| MS.gene061503.t1 | AT2G31790 | 27.313 | 227 | 121 | 8 | 43 | 241 | 99 | 309 | 8.53e-13 | 68.9 |
| MS.gene061503.t1 | AT2G36760 | 25.591 | 254 | 163 | 9 | 8 | 242 | 80 | 326 | 1.06e-12 | 68.9 |
| MS.gene061503.t1 | AT4G15550 | 27.861 | 201 | 128 | 6 | 48 | 240 | 123 | 314 | 2.02e-12 | 67.8 |
| MS.gene061503.t1 | AT2G30140 | 31.217 | 189 | 114 | 6 | 63 | 242 | 126 | 307 | 2.60e-12 | 67.4 |
| MS.gene061503.t1 | AT2G28080 | 27.807 | 187 | 124 | 6 | 63 | 241 | 142 | 325 | 2.70e-12 | 67.4 |
| MS.gene061503.t1 | AT3G46700 | 36.449 | 107 | 63 | 2 | 139 | 241 | 192 | 297 | 3.19e-12 | 67.4 |
| MS.gene061503.t1 | AT5G49690 | 32.407 | 108 | 66 | 2 | 148 | 252 | 215 | 318 | 5.41e-12 | 66.6 |
| MS.gene061503.t1 | AT2G30140 | 31.217 | 189 | 113 | 7 | 63 | 242 | 126 | 306 | 6.61e-12 | 66.2 |
| MS.gene061503.t1 | AT3G53160 | 29.231 | 195 | 113 | 7 | 63 | 241 | 134 | 319 | 1.25e-11 | 65.5 |
| MS.gene061503.t1 | AT1G51210 | 29.101 | 189 | 111 | 6 | 65 | 241 | 138 | 315 | 1.36e-11 | 65.5 |
| MS.gene061503.t1 | AT3G21560 | 24.675 | 231 | 157 | 7 | 23 | 241 | 98 | 323 | 1.69e-11 | 65.1 |
| MS.gene061503.t1 | AT4G34138 | 24.409 | 254 | 145 | 8 | 7 | 240 | 98 | 324 | 3.70e-11 | 63.9 |
| MS.gene061503.t1 | AT1G05560 | 28.365 | 208 | 114 | 7 | 48 | 240 | 107 | 294 | 4.57e-11 | 63.9 |
| MS.gene061503.t1 | AT1G05560 | 28.365 | 208 | 114 | 7 | 48 | 240 | 157 | 344 | 4.88e-11 | 63.9 |
| MS.gene061503.t1 | AT3G02100 | 37.624 | 101 | 49 | 2 | 148 | 239 | 226 | 321 | 7.97e-11 | 63.2 |
| MS.gene061503.t1 | AT2G26480 | 34.058 | 138 | 83 | 3 | 109 | 241 | 163 | 297 | 8.11e-11 | 63.2 |
| MS.gene061503.t1 | AT4G15480 | 33.000 | 100 | 61 | 2 | 150 | 243 | 227 | 326 | 8.66e-11 | 62.8 |
Find 52 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCAATACTTTCAGTAATT+TGG | 0.100876 | 6.1:+76957113 | MS.gene061503:CDS |
| CAAACATGTTAGTGTGTTTA+AGG | 0.162130 | 6.1:+76957226 | MS.gene061503:CDS |
| ATGAGTTTCATTTGTGTTGC+AGG | 0.264646 | 6.1:-76956718 | None:intergenic |
| CAACTCAATGAGTTAGCTTT+TGG | 0.270638 | 6.1:+76957321 | MS.gene061503:CDS |
| CATGATTCTCTTTATAGCTT+TGG | 0.310224 | 6.1:-76957727 | None:intergenic |
| TATGAAATGGTAAATGTTCC+TGG | 0.319016 | 6.1:+76956970 | MS.gene061503:CDS |
| TCTCTCTTGAAGAAACCTTA+TGG | 0.320411 | 6.1:-76957145 | None:intergenic |
| TGAAGAAACCTTATGGCTTC+CGG | 0.352971 | 6.1:-76957138 | None:intergenic |
| TTTACTTCATCATGAAGAAA+TGG | 0.375355 | 6.1:-76956757 | None:intergenic |
| TAAATGAGCATGGTTCTTCT+AGG | 0.377002 | 6.1:+76957817 | MS.gene061503:CDS |
| CACATCAAGAATTGATTTGT+AGG | 0.382627 | 6.1:-76957058 | None:intergenic |
| TTTGACTCATTTCTAATGAT+AGG | 0.384201 | 6.1:-76957195 | None:intergenic |
| CTTGATCTTTCACAGTTAAA+CGG | 0.397927 | 6.1:-76957030 | None:intergenic |
| CTTAGAGTCAAGTTATGAAA+TGG | 0.404715 | 6.1:+76956957 | MS.gene061503:CDS |
| TTCCATGTCAAAGAGCTTCC+CGG | 0.406355 | 6.1:+76957006 | MS.gene061503:CDS |
| CCTAAGGTTTATGATGAAAC+CGG | 0.427718 | 6.1:+76957681 | MS.gene061503:CDS |
| TTGATCTTTCACAGTTAAAC+GGG | 0.428058 | 6.1:-76957029 | None:intergenic |
| CAAGCAGCTTCATCAAGGTT+TGG | 0.430065 | 6.1:-76956925 | None:intergenic |
| TACTTTCAGTAATTTGGAAC+CGG | 0.436232 | 6.1:+76957119 | MS.gene061503:CDS |
| AAAAGAAAAGGTAAGACAAA+AGG | 0.448905 | 6.1:-76956864 | None:intergenic |
| GTTAGTGTGTTTAAGGTGGT+TGG | 0.466646 | 6.1:+76957233 | MS.gene061503:CDS |
| ATTTGGAACCGGAAGCCATA+AGG | 0.482874 | 6.1:+76957130 | MS.gene061503:CDS |
| CTTTCACAGTTAAACGGGCC+GGG | 0.497981 | 6.1:-76957024 | None:intergenic |
| AAGGTCTTCAATGTTGACTT+GGG | 0.511276 | 6.1:-76956680 | None:intergenic |
| ATGAAAGCTTTGAAATTCGA+AGG | 0.513049 | 6.1:+76957757 | MS.gene061503:CDS |
| CAGCTCCTGAAGAAAAGAAA+AGG | 0.514556 | 6.1:-76956876 | None:intergenic |
| ATGTGCTCAAAGTGGCAGTA+AGG | 0.521743 | 6.1:+76957658 | MS.gene061503:intron |
| TTTCTAATGATAGGTCCAAC+CGG | 0.524631 | 6.1:-76957186 | None:intergenic |
| AAACCTAGTGTTTATCCGGT+TGG | 0.530377 | 6.1:+76957171 | MS.gene061503:CDS |
| GAGTTGTCACAAGTTCTTGT+GGG | 0.532027 | 6.1:+76957353 | MS.gene061503:CDS |
| CAAAGCTATAAAGAGAATCA+TGG | 0.532183 | 6.1:+76957728 | MS.gene061503:CDS |
| GAGTACAAGCAGCTTCATCA+AGG | 0.541797 | 6.1:-76956930 | None:intergenic |
| CCGGTTTCATCATAAACCTT+AGG | 0.542819 | 6.1:-76957681 | None:intergenic |
| GAAGGTCTTCAATGTTGACT+TGG | 0.545743 | 6.1:-76956681 | None:intergenic |
| GGAAGCTCTTTGACATGGAA+AGG | 0.546640 | 6.1:-76957003 | None:intergenic |
| CAGGTTCAAGATTATGTGGA+AGG | 0.557674 | 6.1:-76956699 | None:intergenic |
| GTTGCAGGTTCAAGATTATG+TGG | 0.558142 | 6.1:-76956703 | None:intergenic |
| TCTTTCACAGTTAAACGGGC+CGG | 0.558439 | 6.1:-76957025 | None:intergenic |
| TGAGTTGTCACAAGTTCTTG+TGG | 0.567113 | 6.1:+76957352 | MS.gene061503:CDS |
| AAAATCAAAGAATTGAGTGT+TGG | 0.569192 | 6.1:+76957780 | MS.gene061503:CDS |
| TTTAGCAACATCGTGTGCAT+CGG | 0.569814 | 6.1:-76956833 | None:intergenic |
| CAAAGTGGCAGTAAGGCCTA+AGG | 0.571740 | 6.1:+76957665 | MS.gene061503:intron |
| CTAAGGTTTATGATGAAACC+GGG | 0.592467 | 6.1:+76957682 | MS.gene061503:CDS |
| TCTCTACTCTAGCATTGAAG+TGG | 0.606601 | 6.1:+76957847 | MS.gene061503:CDS |
| GGCCGGGAAGCTCTTTGACA+TGG | 0.608641 | 6.1:-76957008 | None:intergenic |
| GCTATAAAGAGAATCATGGA+AGG | 0.638274 | 6.1:+76957732 | MS.gene061503:CDS |
| GAAACTGTACTAAATGAGCA+TGG | 0.646422 | 6.1:+76957807 | MS.gene061503:CDS |
| ACATGTTAGTGTGTTTAAGG+TGG | 0.646806 | 6.1:+76957229 | MS.gene061503:CDS |
| AACCGGGATAATAAAACGAG+AGG | 0.649503 | 6.1:+76957698 | MS.gene061503:CDS |
| AGGTCTTCAATGTTGACTTG+GGG | 0.654290 | 6.1:-76956679 | None:intergenic |
| GGTCCAACCGGATAAACACT+AGG | 0.660497 | 6.1:-76957174 | None:intergenic |
| TGCTGCAGACTAAAGCAACA+AGG | 0.709727 | 6.1:-76956801 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCAATACTTTCAGTAATT+TGG | + | chr6.1:76957113-76957132 | MS.gene061503:CDS | 20.0% |
| ! | AAAAGAAAAGGTAAGACAAA+AGG | - | chr6.1:76956867-76956886 | None:intergenic | 25.0% |
| ! | AAAATCAAAGAATTGAGTGT+TGG | + | chr6.1:76957780-76957799 | MS.gene061503:CDS | 25.0% |
| ! | ACAAAAATAACAGAATTTGG+TGG | - | chr6.1:76957267-76957286 | None:intergenic | 25.0% |
| ! | CAAAAATCATCATTGTTTGA+TGG | + | chr6.1:76957084-76957103 | MS.gene061503:CDS | 25.0% |
| ! | GAGACAAAAATAACAGAATT+TGG | - | chr6.1:76957270-76957289 | None:intergenic | 25.0% |
| ! | TTAGAAAGGACAAAAGAAAA+TGG | + | chr6.1:76957462-76957481 | MS.gene061503:intron | 25.0% |
| ! | TTTACTTCATCATGAAGAAA+TGG | - | chr6.1:76956760-76956779 | None:intergenic | 25.0% |
| ! | TTTGACTCATTTCTAATGAT+AGG | - | chr6.1:76957198-76957217 | None:intergenic | 25.0% |
| !!! | TACCAAATGGTTTTTTAGAA+AGG | + | chr6.1:76957448-76957467 | MS.gene061503:intron | 25.0% |
| !!! | TCTGTTATTTTTGTCTCTTT+TGG | + | chr6.1:76957273-76957292 | MS.gene061503:CDS | 25.0% |
| AGAAAAACCTAGTGTTTATC+CGG | + | chr6.1:76957167-76957186 | MS.gene061503:CDS | 30.0% | |
| CAAACATGTTAGTGTGTTTA+AGG | + | chr6.1:76957226-76957245 | MS.gene061503:CDS | 30.0% | |
| CAAAGCTATAAAGAGAATCA+TGG | + | chr6.1:76957728-76957747 | MS.gene061503:CDS | 30.0% | |
| CATGATTCTCTTTATAGCTT+TGG | - | chr6.1:76957730-76957749 | None:intergenic | 30.0% | |
| CCATTTGGTAAATACTCTAA+TGG | - | chr6.1:76957438-76957457 | None:intergenic | 30.0% | |
| CTTAGAGTCAAGTTATGAAA+TGG | + | chr6.1:76956957-76956976 | MS.gene061503:CDS | 30.0% | |
| CTTGATCTTTCACAGTTAAA+CGG | - | chr6.1:76957033-76957052 | None:intergenic | 30.0% | |
| TATGAAATGGTAAATGTTCC+TGG | + | chr6.1:76956970-76956989 | MS.gene061503:CDS | 30.0% | |
| TTGATCTTTCACAGTTAAAC+GGG | - | chr6.1:76957032-76957051 | None:intergenic | 30.0% | |
| ! | CCATTAGAGTATTTACCAAA+TGG | + | chr6.1:76957435-76957454 | MS.gene061503:intron | 30.0% |
| ! | GTCCTTTCTAAAAAACCATT+TGG | - | chr6.1:76957453-76957472 | None:intergenic | 30.0% |
| ! | TACTTTCAGTAATTTGGAAC+CGG | + | chr6.1:76957119-76957138 | MS.gene061503:CDS | 30.0% |
| ! | TCTTACCTTTTCTTTTCTTC+AGG | + | chr6.1:76956871-76956890 | MS.gene061503:CDS | 30.0% |
| !! | ATGAAAGCTTTGAAATTCGA+AGG | + | chr6.1:76957757-76957776 | MS.gene061503:CDS | 30.0% |
| !! | ATTTTTGTCTCTTTTGGAAG+TGG | + | chr6.1:76957279-76957298 | MS.gene061503:CDS | 30.0% |
| !! | CACATCAAGAATTGATTTGT+AGG | - | chr6.1:76957061-76957080 | None:intergenic | 30.0% |
| !!! | CAACAAGGTTAGTTTTTGAA+AGG | - | chr6.1:76956789-76956808 | None:intergenic | 30.0% |
| !!! | GTTTTTTAAGTCATTGTGGT+TGG | + | chr6.1:76957544-76957563 | MS.gene061503:intron | 30.0% |
| !!! | TCTAGTTCTGCTTATTTTAG+TGG | + | chr6.1:76957399-76957418 | MS.gene061503:intron | 30.0% |
| AACAATGGCCATGTAATCAA+CGG | - | chr6.1:76957603-76957622 | None:intergenic | 35.0% | |
| ACATGTTAGTGTGTTTAAGG+TGG | + | chr6.1:76957229-76957248 | MS.gene061503:CDS | 35.0% | |
| ATGAGTTTCATTTGTGTTGC+AGG | - | chr6.1:76956721-76956740 | None:intergenic | 35.0% | |
| ATTCTTGGTCATGGATCAAT+TGG | + | chr6.1:76957519-76957538 | MS.gene061503:intron | 35.0% | |
| CCTAAGGTTTATGATGAAAC+CGG | + | chr6.1:76957681-76957700 | MS.gene061503:CDS | 35.0% | |
| CTAAGGTTTATGATGAAACC+GGG | + | chr6.1:76957682-76957701 | MS.gene061503:CDS | 35.0% | |
| GAAACTGTACTAAATGAGCA+TGG | + | chr6.1:76957807-76957826 | MS.gene061503:CDS | 35.0% | |
| GCTATAAAGAGAATCATGGA+AGG | + | chr6.1:76957732-76957751 | MS.gene061503:CDS | 35.0% | |
| TAAATGAGCATGGTTCTTCT+AGG | + | chr6.1:76957817-76957836 | MS.gene061503:CDS | 35.0% | |
| TCTCTCTTGAAGAAACCTTA+TGG | - | chr6.1:76957148-76957167 | None:intergenic | 35.0% | |
| TGGAAAGGAATAGAAAAACC+AGG | - | chr6.1:76956991-76957010 | None:intergenic | 35.0% | |
| TTTCTAATGATAGGTCCAAC+CGG | - | chr6.1:76957189-76957208 | None:intergenic | 35.0% | |
| !! | AAGGTCTTCAATGTTGACTT+GGG | - | chr6.1:76956683-76956702 | None:intergenic | 35.0% |
| !! | GACAAAAGAAAATGGACTAG+TGG | + | chr6.1:76957470-76957489 | MS.gene061503:intron | 35.0% |
| !! | TTCCTCTCGTTTTATTATCC+CGG | - | chr6.1:76957703-76957722 | None:intergenic | 35.0% |
| !!! | CAACTCAATGAGTTAGCTTT+TGG | + | chr6.1:76957321-76957340 | MS.gene061503:CDS | 35.0% |
| !!! | GGTGGTTTTTTAAGTCATTG+TGG | + | chr6.1:76957540-76957559 | MS.gene061503:intron | 35.0% |
| AAACCTAGTGTTTATCCGGT+TGG | + | chr6.1:76957171-76957190 | MS.gene061503:CDS | 40.0% | |
| AACCGGGATAATAAAACGAG+AGG | + | chr6.1:76957698-76957717 | MS.gene061503:CDS | 40.0% | |
| ATCCTTTGCTCTGCAAACAA+TGG | - | chr6.1:76957618-76957637 | None:intergenic | 40.0% | |
| CAGCTCCTGAAGAAAAGAAA+AGG | - | chr6.1:76956879-76956898 | None:intergenic | 40.0% | |
| CAGGTTCAAGATTATGTGGA+AGG | - | chr6.1:76956702-76956721 | None:intergenic | 40.0% | |
| CCGGTTTCATCATAAACCTT+AGG | - | chr6.1:76957684-76957703 | None:intergenic | 40.0% | |
| GAGTTGTCACAAGTTCTTGT+GGG | + | chr6.1:76957353-76957372 | MS.gene061503:CDS | 40.0% | |
| GCAGAACTAGAATGCTTACT+TGG | - | chr6.1:76957390-76957409 | None:intergenic | 40.0% | |
| GTTGCAGGTTCAAGATTATG+TGG | - | chr6.1:76956706-76956725 | None:intergenic | 40.0% | |
| TGAAGAAACCTTATGGCTTC+CGG | - | chr6.1:76957141-76957160 | None:intergenic | 40.0% | |
| TGACCAAGAATCTCAACTTG+TGG | - | chr6.1:76957510-76957529 | None:intergenic | 40.0% | |
| TGAGTTGTCACAAGTTCTTG+TGG | + | chr6.1:76957352-76957371 | MS.gene061503:CDS | 40.0% | |
| TTGTGGTTGGAGTTCAACTT+TGG | + | chr6.1:76957557-76957576 | MS.gene061503:intron | 40.0% | |
| TTTAGCAACATCGTGTGCAT+CGG | - | chr6.1:76956836-76956855 | None:intergenic | 40.0% | |
| ! | ACTTTGGAGAGTGTGGTTAA+CGG | + | chr6.1:76957573-76957592 | MS.gene061503:intron | 40.0% |
| ! | CAAGTTGAGATTCTTGGTCA+TGG | + | chr6.1:76957510-76957529 | MS.gene061503:intron | 40.0% |
| ! | GAAGGTCTTCAATGTTGACT+TGG | - | chr6.1:76956684-76956703 | None:intergenic | 40.0% |
| ! | GTTAGTGTGTTTAAGGTGGT+TGG | + | chr6.1:76957233-76957252 | MS.gene061503:CDS | 40.0% |
| ! | TCTCTACTCTAGCATTGAAG+TGG | + | chr6.1:76957847-76957866 | MS.gene061503:CDS | 40.0% |
| !! | AGGTCTTCAATGTTGACTTG+GGG | - | chr6.1:76956682-76956701 | None:intergenic | 40.0% |
| !! | ATGGACTAGTGGTTACATCA+TGG | + | chr6.1:76957481-76957500 | MS.gene061503:intron | 40.0% |
| !! | TGGACTAGTGGTTACATCAT+GGG | + | chr6.1:76957482-76957501 | MS.gene061503:intron | 40.0% |
| !! | TTTGTCTCTTTTGGAAGTGG+TGG | + | chr6.1:76957282-76957301 | MS.gene061503:CDS | 40.0% |
| ACTCACTGATGTGCTCAAAG+TGG | + | chr6.1:76957650-76957669 | MS.gene061503:intron | 45.0% | |
| ATGTGCTCAAAGTGGCAGTA+AGG | + | chr6.1:76957658-76957677 | MS.gene061503:intron | 45.0% | |
| CAAGCAGCTTCATCAAGGTT+TGG | - | chr6.1:76956928-76956947 | None:intergenic | 45.0% | |
| CTTGGTCATGGATCAATTGG+TGG | + | chr6.1:76957522-76957541 | MS.gene061503:intron | 45.0% | |
| GAGTACAAGCAGCTTCATCA+AGG | - | chr6.1:76956933-76956952 | None:intergenic | 45.0% | |
| GGAAGCTCTTTGACATGGAA+AGG | - | chr6.1:76957006-76957025 | None:intergenic | 45.0% | |
| TCTTTCACAGTTAAACGGGC+CGG | - | chr6.1:76957028-76957047 | None:intergenic | 45.0% | |
| TGCTGCAGACTAAAGCAACA+AGG | - | chr6.1:76956804-76956823 | None:intergenic | 45.0% | |
| TTCCATGTCAAAGAGCTTCC+CGG | + | chr6.1:76957006-76957025 | MS.gene061503:CDS | 45.0% | |
| ! | ATTTGGAACCGGAAGCCATA+AGG | + | chr6.1:76957130-76957149 | MS.gene061503:CDS | 45.0% |
| ! | GAGTTCAACTTTGGAGAGTG+TGG | + | chr6.1:76957566-76957585 | MS.gene061503:intron | 45.0% |
| ! | GCACCACAAGTTGAGATTCT+TGG | + | chr6.1:76957504-76957523 | MS.gene061503:intron | 45.0% |
| CAAAGTGGCAGTAAGGCCTA+AGG | + | chr6.1:76957665-76957684 | MS.gene061503:intron | 50.0% | |
| CTTTCACAGTTAAACGGGCC+GGG | - | chr6.1:76957027-76957046 | None:intergenic | 50.0% | |
| GGCCATTGTTTGCAGAGCAA+AGG | + | chr6.1:76957613-76957632 | MS.gene061503:intron | 50.0% | |
| GGTCCAACCGGATAAACACT+AGG | - | chr6.1:76957177-76957196 | None:intergenic | 50.0% | |
| ! | ACGGCGTGCCGTTGATTACA+TGG | + | chr6.1:76957592-76957611 | MS.gene061503:intron | 55.0% |
| GGCCGGGAAGCTCTTTGACA+TGG | - | chr6.1:76957011-76957030 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 76956661 | 76957875 | 76956661 | ID=MS.gene061503 |
| chr6.1 | mRNA | 76956661 | 76957875 | 76956661 | ID=MS.gene061503.t1;Parent=MS.gene061503 |
| chr6.1 | exon | 76956661 | 76957390 | 76956661 | ID=MS.gene061503.t1.exon1;Parent=MS.gene061503.t1 |
| chr6.1 | CDS | 76956661 | 76957390 | 76956661 | ID=cds.MS.gene061503.t1;Parent=MS.gene061503.t1 |
| chr6.1 | exon | 76957670 | 76957875 | 76957670 | ID=MS.gene061503.t1.exon2;Parent=MS.gene061503.t1 |
| chr6.1 | CDS | 76957670 | 76957875 | 76957670 | ID=cds.MS.gene061503.t1;Parent=MS.gene061503.t1 |
| Gene Sequence |
| Protein sequence |
