Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059604.t1 | XP_013441908.1 | 71.2 | 465 | 20 | 1 | 1 | 351 | 1 | 465 | 6.70E-173 | 616.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059604.t1 | Q9AR73 | 44.7 | 302 | 161 | 5 | 1 | 300 | 1 | 298 | 4.5e-69 | 263.1 |
| MS.gene059604.t1 | Q9AR73 | 48.1 | 52 | 27 | 0 | 300 | 351 | 413 | 464 | 2.7e-05 | 51.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059604.t1 | G8A0P3 | 71.2 | 465 | 20 | 1 | 1 | 351 | 1 | 465 | 4.8e-173 | 616.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059604 | MS.gene059634 | 0.811243 | 7.72E-51 | -1.69E-46 |
| MS.gene059604 | MS.gene061503 | 0.864369 | 1.28E-64 | -1.69E-46 |
| MS.gene059604 | MS.gene67631 | 0.821669 | 3.57E-53 | -1.69E-46 |
| MS.gene059604 | MS.gene68991 | 0.904425 | 1.24E-79 | -1.69E-46 |
| MS.gene059604 | MS.gene72248 | 0.845704 | 3.44E-59 | -1.69E-46 |
| MS.gene059604 | MS.gene90556 | 0.812312 | 4.52E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059604.t1 | MTR_6g488280 | 94.667 | 300 | 16 | 0 | 1 | 300 | 1 | 300 | 0.0 | 588 |
| MS.gene059604.t1 | MTR_6g488280 | 92.157 | 51 | 4 | 0 | 301 | 351 | 415 | 465 | 1.47e-21 | 95.9 |
| MS.gene059604.t1 | MTR_0428s0010 | 94.667 | 300 | 16 | 0 | 1 | 300 | 1 | 300 | 0.0 | 588 |
| MS.gene059604.t1 | MTR_0428s0010 | 92.157 | 51 | 4 | 0 | 301 | 351 | 415 | 465 | 1.47e-21 | 95.9 |
| MS.gene059604.t1 | MTR_6g023665 | 88.667 | 300 | 34 | 0 | 1 | 300 | 8 | 307 | 0.0 | 552 |
| MS.gene059604.t1 | MTR_6g023665 | 94.118 | 51 | 3 | 0 | 301 | 351 | 422 | 472 | 2.37e-22 | 98.2 |
| MS.gene059604.t1 | MTR_8g006730 | 70.724 | 304 | 83 | 4 | 1 | 300 | 1 | 302 | 3.56e-149 | 429 |
| MS.gene059604.t1 | MTR_8g006730 | 77.551 | 49 | 11 | 0 | 301 | 349 | 417 | 465 | 2.84e-15 | 77.0 |
| MS.gene059604.t1 | MTR_8g006710 | 69.967 | 303 | 86 | 3 | 1 | 300 | 1 | 301 | 7.38e-149 | 428 |
| MS.gene059604.t1 | MTR_8g006710 | 68.627 | 51 | 16 | 0 | 301 | 351 | 416 | 466 | 1.69e-13 | 71.6 |
| MS.gene059604.t1 | MTR_8g465670 | 56.146 | 301 | 127 | 3 | 2 | 300 | 3 | 300 | 3.22e-114 | 340 |
| MS.gene059604.t1 | MTR_8g006220 | 56.291 | 302 | 127 | 3 | 1 | 300 | 1 | 299 | 8.13e-114 | 339 |
| MS.gene059604.t1 | MTR_0184s0040 | 44.590 | 305 | 161 | 6 | 1 | 300 | 16 | 317 | 1.04e-78 | 249 |
| MS.gene059604.t1 | MTR_0078s0190 | 44.590 | 305 | 161 | 6 | 1 | 300 | 16 | 317 | 1.04e-78 | 249 |
| MS.gene059604.t1 | MTR_0078s0200 | 42.997 | 307 | 164 | 6 | 1 | 300 | 1 | 303 | 4.52e-77 | 239 |
| MS.gene059604.t1 | MTR_0078s0010 | 43.279 | 305 | 165 | 6 | 1 | 300 | 1 | 302 | 3.38e-76 | 242 |
| MS.gene059604.t1 | MTR_8g008990 | 44.408 | 304 | 162 | 5 | 1 | 300 | 1 | 301 | 9.87e-76 | 241 |
| MS.gene059604.t1 | MTR_8g009063 | 45.066 | 304 | 160 | 5 | 1 | 300 | 8 | 308 | 1.87e-75 | 241 |
| MS.gene059604.t1 | MTR_7g047030 | 42.951 | 305 | 166 | 6 | 1 | 300 | 1 | 302 | 2.35e-75 | 240 |
| MS.gene059604.t1 | MTR_7g047270 | 42.951 | 305 | 166 | 6 | 1 | 300 | 1 | 302 | 2.35e-75 | 240 |
| MS.gene059604.t1 | MTR_0184s0030 | 42.997 | 307 | 164 | 6 | 1 | 300 | 1 | 303 | 3.03e-75 | 240 |
| MS.gene059604.t1 | MTR_8g009055 | 44.079 | 304 | 163 | 5 | 1 | 300 | 1 | 301 | 5.03e-75 | 239 |
| MS.gene059604.t1 | MTR_8g009073 | 43.750 | 304 | 164 | 5 | 1 | 300 | 1 | 301 | 1.06e-74 | 238 |
| MS.gene059604.t1 | MTR_7g046490 | 45.847 | 301 | 159 | 4 | 1 | 300 | 1 | 298 | 2.83e-74 | 237 |
| MS.gene059604.t1 | MTR_0078s0060 | 44.737 | 304 | 161 | 6 | 1 | 300 | 1 | 301 | 3.29e-74 | 237 |
| MS.gene059604.t1 | MTR_8g009050 | 43.750 | 304 | 164 | 6 | 1 | 300 | 1 | 301 | 2.27e-73 | 235 |
| MS.gene059604.t1 | MTR_1g019510 | 42.053 | 302 | 170 | 4 | 1 | 300 | 1 | 299 | 1.27e-72 | 233 |
| MS.gene059604.t1 | MTR_8g009067 | 44.660 | 309 | 154 | 5 | 1 | 300 | 1 | 301 | 1.41e-72 | 233 |
| MS.gene059604.t1 | MTR_8g027885 | 41.346 | 312 | 172 | 8 | 7 | 316 | 19 | 321 | 3.00e-71 | 229 |
| MS.gene059604.t1 | MTR_8g027870 | 40.514 | 311 | 176 | 7 | 7 | 316 | 19 | 321 | 5.88e-69 | 224 |
| MS.gene059604.t1 | MTR_7g117170 | 42.574 | 303 | 157 | 6 | 7 | 300 | 16 | 310 | 7.05e-69 | 224 |
| MS.gene059604.t1 | MTR_8g008970 | 43.750 | 304 | 164 | 5 | 1 | 300 | 1 | 301 | 4.04e-68 | 228 |
| MS.gene059604.t1 | MTR_8g008970 | 47.573 | 103 | 50 | 2 | 191 | 289 | 527 | 629 | 3.39e-18 | 86.3 |
| MS.gene059604.t1 | MTR_8g077590 | 42.333 | 300 | 162 | 6 | 7 | 300 | 10 | 304 | 3.21e-66 | 216 |
| MS.gene059604.t1 | MTR_6g005600 | 39.803 | 304 | 176 | 5 | 1 | 300 | 1 | 301 | 2.73e-63 | 209 |
| MS.gene059604.t1 | MTR_8g006270 | 40.063 | 317 | 171 | 9 | 1 | 306 | 1 | 309 | 4.32e-62 | 206 |
| MS.gene059604.t1 | MTR_8g006260 | 39.936 | 313 | 171 | 9 | 1 | 302 | 1 | 307 | 6.25e-60 | 200 |
| MS.gene059604.t1 | MTR_8g012745 | 40.584 | 308 | 171 | 6 | 1 | 300 | 1 | 304 | 9.81e-56 | 189 |
| MS.gene059604.t1 | MTR_8g012635 | 39.935 | 308 | 173 | 6 | 1 | 300 | 1 | 304 | 6.94e-55 | 187 |
| MS.gene059604.t1 | MTR_8g012650 | 39.935 | 308 | 173 | 6 | 1 | 300 | 1 | 304 | 3.57e-54 | 185 |
| MS.gene059604.t1 | MTR_3g009510 | 31.290 | 310 | 197 | 7 | 4 | 300 | 3 | 309 | 5.12e-45 | 160 |
| MS.gene059604.t1 | MTR_8g006230 | 43.147 | 197 | 102 | 6 | 109 | 300 | 52 | 243 | 3.20e-44 | 154 |
| MS.gene059604.t1 | MTR_8g012630 | 34.323 | 303 | 141 | 4 | 1 | 300 | 1 | 248 | 8.49e-44 | 156 |
| MS.gene059604.t1 | MTR_6g033625 | 32.803 | 314 | 188 | 7 | 4 | 300 | 2 | 309 | 1.53e-42 | 154 |
| MS.gene059604.t1 | MTR_8g009067 | 46.316 | 190 | 85 | 5 | 120 | 300 | 2 | 183 | 3.72e-42 | 150 |
| MS.gene059604.t1 | MTR_5g019580 | 31.529 | 314 | 179 | 9 | 9 | 300 | 10 | 309 | 3.30e-41 | 150 |
| MS.gene059604.t1 | MTR_6g005660 | 35.019 | 257 | 160 | 5 | 1 | 253 | 1 | 254 | 4.76e-39 | 139 |
| MS.gene059604.t1 | MTR_5g090630 | 32.573 | 307 | 184 | 11 | 3 | 299 | 2 | 295 | 6.12e-39 | 144 |
| MS.gene059604.t1 | MTR_8g074550 | 33.974 | 312 | 188 | 8 | 5 | 305 | 7 | 311 | 8.07e-39 | 144 |
| MS.gene059604.t1 | MTR_8g009073 | 44.571 | 175 | 90 | 5 | 130 | 300 | 1 | 172 | 1.28e-37 | 138 |
| MS.gene059604.t1 | MTR_6g033615 | 29.870 | 308 | 191 | 7 | 4 | 300 | 2 | 295 | 2.56e-37 | 139 |
| MS.gene059604.t1 | MTR_5g070040 | 33.333 | 318 | 181 | 14 | 1 | 299 | 6 | 311 | 4.91e-37 | 139 |
| MS.gene059604.t1 | MTR_5g090670 | 31.429 | 315 | 186 | 11 | 4 | 299 | 3 | 306 | 5.64e-37 | 139 |
| MS.gene059604.t1 | MTR_6g033660 | 29.677 | 310 | 196 | 7 | 7 | 300 | 5 | 308 | 5.89e-37 | 139 |
| MS.gene059604.t1 | MTR_5g098930 | 31.353 | 303 | 187 | 11 | 7 | 299 | 6 | 297 | 6.54e-36 | 136 |
| MS.gene059604.t1 | MTR_5g090700 | 29.231 | 325 | 202 | 10 | 4 | 310 | 3 | 317 | 1.14e-35 | 135 |
| MS.gene059604.t1 | MTR_5g070090 | 31.935 | 310 | 188 | 12 | 10 | 304 | 15 | 316 | 7.87e-35 | 133 |
| MS.gene059604.t1 | MTR_5g090600 | 30.330 | 333 | 209 | 12 | 3 | 322 | 2 | 324 | 1.20e-33 | 129 |
| MS.gene059604.t1 | MTR_5g090580 | 31.024 | 332 | 201 | 12 | 4 | 318 | 3 | 323 | 3.63e-33 | 128 |
| MS.gene059604.t1 | MTR_6g033725 | 28.743 | 334 | 195 | 10 | 4 | 314 | 2 | 315 | 5.59e-33 | 128 |
| MS.gene059604.t1 | MTR_6g033675 | 28.788 | 330 | 212 | 9 | 4 | 316 | 2 | 325 | 7.14e-33 | 127 |
| MS.gene059604.t1 | MTR_5g090620 | 30.547 | 311 | 192 | 11 | 4 | 299 | 3 | 304 | 7.64e-32 | 125 |
| MS.gene059604.t1 | MTR_5g090660 | 30.097 | 309 | 194 | 10 | 4 | 299 | 3 | 302 | 1.23e-31 | 125 |
| MS.gene059604.t1 | MTR_5g019580 | 31.373 | 306 | 162 | 11 | 9 | 300 | 62 | 333 | 1.59e-31 | 124 |
| MS.gene059604.t1 | MTR_2g040530 | 29.773 | 309 | 197 | 8 | 3 | 299 | 2 | 302 | 4.62e-31 | 122 |
| MS.gene059604.t1 | MTR_2g046750 | 29.773 | 309 | 190 | 8 | 7 | 299 | 6 | 303 | 1.04e-30 | 121 |
| MS.gene059604.t1 | MTR_2g046820 | 29.373 | 303 | 196 | 7 | 7 | 299 | 6 | 300 | 1.84e-29 | 118 |
| MS.gene059604.t1 | MTR_5g090610 | 28.896 | 308 | 187 | 11 | 4 | 299 | 3 | 290 | 5.55e-29 | 117 |
| MS.gene059604.t1 | MTR_8g012730 | 40.764 | 157 | 74 | 4 | 144 | 300 | 4 | 141 | 5.22e-24 | 100 |
| MS.gene059604.t1 | MTR_5g464760 | 27.647 | 340 | 190 | 14 | 2 | 300 | 8 | 332 | 1.15e-22 | 99.0 |
| MS.gene059604.t1 | MTR_5g464810 | 27.811 | 338 | 190 | 14 | 2 | 300 | 8 | 330 | 8.78e-22 | 96.3 |
| MS.gene059604.t1 | MTR_5g064240 | 27.811 | 338 | 190 | 14 | 2 | 300 | 8 | 330 | 8.78e-22 | 96.3 |
| MS.gene059604.t1 | MTR_5g090650 | 26.384 | 307 | 177 | 12 | 4 | 299 | 3 | 271 | 1.07e-21 | 94.4 |
| MS.gene059604.t1 | MTR_3g009500 | 27.451 | 255 | 168 | 6 | 4 | 244 | 3 | 254 | 1.20e-21 | 93.2 |
| MS.gene059604.t1 | MTR_4g082810 | 28.704 | 324 | 195 | 12 | 7 | 308 | 8 | 317 | 1.30e-21 | 95.5 |
| MS.gene059604.t1 | MTR_6g078320 | 25.836 | 329 | 208 | 10 | 7 | 308 | 12 | 331 | 1.17e-20 | 93.2 |
| MS.gene059604.t1 | MTR_3g069690 | 27.532 | 316 | 193 | 11 | 2 | 300 | 3 | 299 | 1.85e-19 | 89.4 |
| MS.gene059604.t1 | MTR_8g068330 | 27.224 | 371 | 217 | 14 | 7 | 348 | 9 | 355 | 2.03e-19 | 89.4 |
| MS.gene059604.t1 | MTR_0036s0220 | 26.190 | 336 | 188 | 15 | 7 | 300 | 13 | 330 | 3.10e-19 | 89.0 |
| MS.gene059604.t1 | MTR_2g008210 | 27.052 | 329 | 187 | 15 | 9 | 300 | 14 | 326 | 3.46e-19 | 89.0 |
| MS.gene059604.t1 | MTR_3g009520 | 26.744 | 258 | 172 | 6 | 1 | 244 | 1 | 255 | 4.68e-19 | 85.9 |
| MS.gene059604.t1 | MTR_2g008220 | 28.739 | 341 | 197 | 14 | 7 | 321 | 15 | 335 | 6.94e-19 | 87.8 |
| MS.gene059604.t1 | MTR_2g098430 | 24.316 | 329 | 202 | 12 | 1 | 300 | 1 | 311 | 2.43e-18 | 86.3 |
| MS.gene059604.t1 | MTR_7g013180 | 24.841 | 314 | 193 | 8 | 10 | 300 | 9 | 302 | 5.32e-18 | 85.1 |
| MS.gene059604.t1 | MTR_6g014290 | 26.048 | 334 | 193 | 13 | 7 | 300 | 11 | 330 | 7.41e-18 | 84.7 |
| MS.gene059604.t1 | MTR_4g082820 | 26.888 | 331 | 189 | 10 | 7 | 308 | 8 | 314 | 1.02e-17 | 84.3 |
| MS.gene059604.t1 | MTR_3g479490 | 27.606 | 355 | 172 | 18 | 1 | 300 | 1 | 325 | 1.51e-17 | 84.0 |
| MS.gene059604.t1 | MTR_6g038240 | 24.847 | 326 | 180 | 13 | 9 | 300 | 14 | 308 | 6.78e-17 | 82.0 |
| MS.gene059604.t1 | MTR_3g069710 | 27.184 | 309 | 191 | 11 | 7 | 300 | 13 | 302 | 6.80e-17 | 82.0 |
| MS.gene059604.t1 | MTR_5g090690 | 26.667 | 255 | 144 | 6 | 75 | 318 | 31 | 253 | 7.10e-17 | 81.3 |
| MS.gene059604.t1 | MTR_2g008225 | 26.531 | 343 | 202 | 12 | 7 | 321 | 16 | 336 | 7.85e-17 | 81.6 |
| MS.gene059604.t1 | MTR_4g094220 | 25.507 | 345 | 184 | 14 | 7 | 300 | 8 | 330 | 1.65e-16 | 80.9 |
| MS.gene059604.t1 | MTR_6g038300 | 26.446 | 363 | 175 | 16 | 1 | 311 | 1 | 323 | 1.84e-16 | 80.5 |
| MS.gene059604.t1 | MTR_5g035560 | 24.773 | 331 | 182 | 11 | 3 | 300 | 8 | 304 | 1.87e-16 | 80.9 |
| MS.gene059604.t1 | MTR_2g008226 | 26.994 | 326 | 206 | 11 | 1 | 300 | 1 | 320 | 2.41e-16 | 80.1 |
| MS.gene059604.t1 | MTR_3g479470 | 25.294 | 340 | 201 | 11 | 7 | 307 | 14 | 339 | 4.84e-16 | 79.3 |
| MS.gene059604.t1 | MTR_8g068360 | 26.781 | 351 | 205 | 13 | 2 | 321 | 8 | 337 | 5.19e-16 | 79.3 |
| MS.gene059604.t1 | MTR_4g008630 | 24.198 | 343 | 220 | 9 | 2 | 330 | 10 | 326 | 6.87e-16 | 79.0 |
| MS.gene059604.t1 | MTR_8g068340 | 24.462 | 372 | 236 | 11 | 2 | 348 | 8 | 359 | 8.05e-16 | 78.6 |
| MS.gene059604.t1 | MTR_1g019520 | 71.739 | 46 | 13 | 0 | 255 | 300 | 3 | 48 | 8.73e-16 | 75.9 |
| MS.gene059604.t1 | MTR_6g014220 | 24.848 | 330 | 200 | 12 | 8 | 300 | 12 | 330 | 1.08e-15 | 78.2 |
| MS.gene059604.t1 | MTR_4g123553 | 27.988 | 343 | 192 | 15 | 7 | 321 | 16 | 331 | 1.29e-15 | 78.2 |
| MS.gene059604.t1 | MTR_6g038200 | 26.190 | 336 | 180 | 15 | 2 | 300 | 4 | 308 | 2.01e-15 | 77.4 |
| MS.gene059604.t1 | MTR_6g036650 | 26.488 | 336 | 213 | 11 | 7 | 321 | 19 | 341 | 2.40e-15 | 77.4 |
| MS.gene059604.t1 | MTR_5g040030 | 26.377 | 345 | 223 | 12 | 7 | 328 | 15 | 351 | 2.61e-15 | 77.4 |
| MS.gene059604.t1 | MTR_5g058320 | 25.714 | 315 | 203 | 9 | 8 | 300 | 12 | 317 | 3.80e-15 | 76.6 |
| MS.gene059604.t1 | MTR_3g008010 | 24.316 | 329 | 201 | 12 | 9 | 300 | 13 | 330 | 4.03e-15 | 76.6 |
| MS.gene059604.t1 | MTR_5g035580 | 24.471 | 331 | 183 | 11 | 3 | 300 | 10 | 306 | 4.84e-15 | 76.3 |
| MS.gene059604.t1 | MTR_4g485630 | 27.246 | 334 | 194 | 13 | 16 | 319 | 19 | 333 | 8.93e-15 | 75.5 |
| MS.gene059604.t1 | MTR_5g031860 | 26.994 | 326 | 192 | 15 | 7 | 300 | 13 | 324 | 1.08e-14 | 75.5 |
| MS.gene059604.t1 | MTR_7g102460 | 26.087 | 345 | 206 | 13 | 9 | 324 | 12 | 336 | 1.19e-14 | 75.1 |
| MS.gene059604.t1 | MTR_7g013200 | 24.367 | 316 | 186 | 10 | 9 | 300 | 8 | 294 | 1.29e-14 | 75.1 |
| MS.gene059604.t1 | MTR_4g064987 | 26.140 | 329 | 218 | 13 | 1 | 316 | 1 | 317 | 1.56e-14 | 74.7 |
| MS.gene059604.t1 | MTR_4g064987 | 25.836 | 329 | 213 | 13 | 1 | 316 | 1 | 311 | 2.19e-14 | 74.3 |
| MS.gene059604.t1 | MTR_7g055710 | 24.928 | 349 | 217 | 12 | 3 | 321 | 8 | 341 | 3.48e-14 | 73.9 |
| MS.gene059604.t1 | MTR_6g014040 | 26.946 | 334 | 189 | 13 | 9 | 300 | 13 | 333 | 3.76e-14 | 73.6 |
| MS.gene059604.t1 | MTR_8g059425 | 25.526 | 333 | 206 | 12 | 2 | 300 | 6 | 330 | 3.79e-14 | 73.6 |
| MS.gene059604.t1 | MTR_7g080935 | 24.855 | 346 | 169 | 14 | 1 | 300 | 6 | 306 | 4.66e-14 | 73.2 |
| MS.gene059604.t1 | MTR_7g070660 | 24.332 | 337 | 210 | 11 | 3 | 315 | 8 | 323 | 6.67e-14 | 72.8 |
| MS.gene059604.t1 | MTR_8g083290 | 25.610 | 328 | 189 | 10 | 7 | 300 | 5 | 311 | 6.89e-14 | 72.8 |
| MS.gene059604.t1 | MTR_7g013220 | 23.676 | 321 | 193 | 10 | 9 | 300 | 8 | 305 | 9.96e-14 | 72.4 |
| MS.gene059604.t1 | MTR_6g052375 | 33.571 | 140 | 77 | 6 | 169 | 296 | 27 | 162 | 1.19e-13 | 71.2 |
| MS.gene059604.t1 | MTR_7g013240 | 24.675 | 308 | 192 | 8 | 10 | 300 | 10 | 294 | 1.27e-13 | 72.0 |
| MS.gene059604.t1 | MTR_4g485640 | 24.917 | 301 | 196 | 9 | 14 | 300 | 217 | 501 | 1.94e-13 | 71.6 |
| MS.gene059604.t1 | MTR_4g485620 | 26.360 | 239 | 142 | 5 | 111 | 327 | 99 | 325 | 2.02e-13 | 71.2 |
| MS.gene059604.t1 | MTR_6g038230 | 31.651 | 218 | 112 | 10 | 105 | 300 | 106 | 308 | 2.51e-13 | 71.2 |
| MS.gene059604.t1 | MTR_3g479520 | 24.854 | 342 | 198 | 13 | 1 | 300 | 10 | 334 | 2.63e-13 | 71.2 |
| MS.gene059604.t1 | MTR_7g013260 | 25.078 | 319 | 180 | 10 | 9 | 300 | 9 | 295 | 2.70e-13 | 70.9 |
| MS.gene059604.t1 | MTR_7g102550 | 26.050 | 357 | 202 | 14 | 3 | 324 | 6 | 335 | 2.97e-13 | 70.9 |
| MS.gene059604.t1 | MTR_5g072860 | 27.190 | 331 | 188 | 12 | 7 | 307 | 19 | 326 | 4.85e-13 | 70.1 |
| MS.gene059604.t1 | MTR_6g014170 | 26.807 | 332 | 173 | 16 | 9 | 300 | 13 | 314 | 6.75e-13 | 69.7 |
| MS.gene059604.t1 | MTR_6g014250 | 24.024 | 333 | 199 | 13 | 8 | 300 | 12 | 330 | 6.86e-13 | 69.7 |
| MS.gene059604.t1 | MTR_8g066610 | 25.000 | 356 | 211 | 12 | 7 | 325 | 10 | 346 | 7.21e-13 | 69.7 |
| MS.gene059604.t1 | MTR_4g095008 | 27.197 | 239 | 144 | 8 | 80 | 300 | 82 | 308 | 7.69e-13 | 69.7 |
| MS.gene059604.t1 | MTR_3g079480 | 23.810 | 336 | 197 | 12 | 7 | 300 | 22 | 340 | 7.89e-13 | 69.7 |
| MS.gene059604.t1 | MTR_7g070940 | 37.391 | 115 | 68 | 2 | 190 | 300 | 194 | 308 | 8.23e-13 | 69.7 |
| MS.gene059604.t1 | MTR_0009s0240 | 25.532 | 329 | 211 | 13 | 3 | 312 | 4 | 317 | 8.67e-13 | 69.3 |
| MS.gene059604.t1 | MTR_5g087620 | 24.118 | 340 | 201 | 13 | 2 | 300 | 6 | 329 | 8.82e-13 | 69.7 |
| MS.gene059604.t1 | MTR_4g031800 | 29.787 | 141 | 85 | 3 | 174 | 300 | 168 | 308 | 9.21e-13 | 69.3 |
| MS.gene059604.t1 | MTR_6g014187 | 25.731 | 342 | 196 | 16 | 2 | 300 | 6 | 332 | 1.20e-12 | 68.9 |
| MS.gene059604.t1 | MTR_6g014020 | 25.000 | 332 | 199 | 11 | 8 | 300 | 12 | 332 | 1.61e-12 | 68.6 |
| MS.gene059604.t1 | MTR_6g011340 | 25.080 | 311 | 181 | 11 | 31 | 300 | 33 | 332 | 1.63e-12 | 68.6 |
| MS.gene059604.t1 | MTR_6g013960 | 26.453 | 344 | 191 | 19 | 2 | 300 | 6 | 332 | 1.70e-12 | 68.6 |
| MS.gene059604.t1 | MTR_7g067120 | 25.786 | 318 | 178 | 12 | 3 | 300 | 6 | 285 | 1.76e-12 | 68.6 |
| MS.gene059604.t1 | MTR_0536s0020 | 34.266 | 143 | 72 | 6 | 192 | 321 | 193 | 326 | 1.90e-12 | 68.6 |
| MS.gene059604.t1 | MTR_5g031840 | 26.941 | 219 | 135 | 7 | 117 | 312 | 118 | 334 | 1.92e-12 | 68.6 |
| MS.gene059604.t1 | MTR_2g046620 | 25.519 | 337 | 208 | 12 | 7 | 321 | 17 | 332 | 1.96e-12 | 68.6 |
| MS.gene059604.t1 | MTR_4g485590 | 27.979 | 193 | 105 | 7 | 173 | 336 | 143 | 330 | 2.34e-12 | 68.2 |
| MS.gene059604.t1 | MTR_4g077960 | 28.221 | 326 | 197 | 15 | 15 | 321 | 1 | 308 | 3.68e-12 | 67.4 |
| MS.gene059604.t1 | MTR_6g014186 | 24.625 | 333 | 197 | 14 | 9 | 300 | 10 | 329 | 3.97e-12 | 67.4 |
| MS.gene059604.t1 | MTR_8g071070 | 26.183 | 317 | 209 | 11 | 3 | 300 | 4 | 314 | 4.05e-12 | 67.4 |
| MS.gene059604.t1 | MTR_7g080940 | 24.179 | 335 | 185 | 14 | 1 | 300 | 6 | 306 | 4.75e-12 | 67.0 |
| MS.gene059604.t1 | MTR_7g067330 | 26.032 | 315 | 181 | 10 | 3 | 300 | 6 | 285 | 4.94e-12 | 67.0 |
| MS.gene059604.t1 | MTR_7g070870 | 32.639 | 144 | 83 | 5 | 192 | 328 | 207 | 343 | 5.06e-12 | 67.0 |
| MS.gene059604.t1 | MTR_7g071040 | 24.581 | 358 | 220 | 13 | 3 | 328 | 14 | 353 | 5.81e-12 | 67.0 |
| MS.gene059604.t1 | MTR_8g083280 | 37.234 | 94 | 55 | 1 | 211 | 300 | 221 | 314 | 5.97e-12 | 67.0 |
| MS.gene059604.t1 | MTR_6g013450 | 25.826 | 333 | 196 | 14 | 8 | 300 | 12 | 333 | 7.39e-12 | 66.6 |
| MS.gene059604.t1 | MTR_1g029540 | 23.410 | 346 | 216 | 13 | 2 | 330 | 10 | 323 | 7.67e-12 | 66.6 |
| MS.gene059604.t1 | MTR_6g014050 | 31.325 | 166 | 96 | 8 | 149 | 300 | 172 | 333 | 1.07e-11 | 66.2 |
| MS.gene059604.t1 | MTR_7g102560 | 30.323 | 155 | 86 | 4 | 191 | 331 | 194 | 340 | 1.24e-11 | 65.9 |
| MS.gene059604.t1 | MTR_5g016480 | 30.645 | 186 | 95 | 8 | 157 | 315 | 149 | 327 | 1.30e-11 | 65.9 |
| MS.gene059604.t1 | MTR_5g072810 | 24.465 | 327 | 189 | 14 | 3 | 300 | 8 | 305 | 1.73e-11 | 65.5 |
| MS.gene059604.t1 | MTR_4g117960 | 25.526 | 333 | 207 | 16 | 10 | 321 | 15 | 327 | 1.89e-11 | 65.5 |
| MS.gene059604.t1 | MTR_7g102490 | 24.716 | 352 | 214 | 14 | 4 | 324 | 7 | 338 | 1.89e-11 | 65.5 |
| MS.gene059604.t1 | MTR_0288s0020 | 25.466 | 322 | 193 | 13 | 7 | 300 | 11 | 313 | 2.11e-11 | 65.1 |
| MS.gene059604.t1 | MTR_6g013990 | 38.938 | 113 | 53 | 4 | 200 | 300 | 222 | 330 | 2.72e-11 | 65.1 |
| MS.gene059604.t1 | MTR_7g070610 | 27.003 | 337 | 188 | 16 | 11 | 315 | 20 | 330 | 2.72e-11 | 65.1 |
| MS.gene059604.t1 | MTR_8g064870 | 33.654 | 104 | 58 | 3 | 211 | 304 | 216 | 318 | 2.80e-11 | 65.1 |
| MS.gene059604.t1 | MTR_1g062380 | 23.620 | 326 | 210 | 15 | 7 | 305 | 17 | 330 | 3.23e-11 | 64.7 |
| MS.gene059604.t1 | MTR_6g038220 | 27.723 | 202 | 105 | 8 | 123 | 300 | 123 | 307 | 3.53e-11 | 64.7 |
| MS.gene059604.t1 | MTR_7g070780 | 25.868 | 317 | 193 | 12 | 11 | 300 | 18 | 319 | 4.82e-11 | 64.3 |
| MS.gene059604.t1 | MTR_5g031830 | 26.296 | 270 | 165 | 11 | 91 | 334 | 101 | 362 | 5.00e-11 | 63.9 |
| MS.gene059604.t1 | MTR_5g016660 | 23.932 | 351 | 206 | 14 | 16 | 328 | 20 | 347 | 5.77e-11 | 63.9 |
| MS.gene059604.t1 | MTR_8g466240 | 25.705 | 319 | 190 | 14 | 4 | 298 | 6 | 301 | 5.82e-11 | 63.9 |
| MS.gene059604.t1 | MTR_7g011470 | 31.944 | 144 | 83 | 5 | 170 | 300 | 177 | 318 | 6.98e-11 | 63.5 |
| MS.gene059604.t1 | MTR_6g035265 | 23.565 | 331 | 203 | 15 | 12 | 321 | 19 | 320 | 9.36e-11 | 63.2 |
| MS.gene059604.t1 | MTR_1g040310 | 25.145 | 346 | 203 | 13 | 16 | 328 | 25 | 347 | 9.46e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059604.t1 | AT4G01070 | 42.484 | 306 | 164 | 9 | 2 | 300 | 3 | 303 | 1.30e-66 | 214 |
| MS.gene059604.t1 | AT4G01070 | 42.484 | 306 | 164 | 9 | 2 | 300 | 3 | 303 | 7.01e-66 | 216 |
| MS.gene059604.t1 | AT1G01420 | 40.132 | 304 | 171 | 8 | 3 | 300 | 8 | 306 | 1.40e-64 | 213 |
| MS.gene059604.t1 | AT1G01420 | 40.132 | 304 | 171 | 8 | 3 | 300 | 5 | 303 | 1.79e-64 | 212 |
| MS.gene059604.t1 | AT1G01390 | 39.934 | 303 | 173 | 7 | 3 | 300 | 5 | 303 | 1.88e-62 | 207 |
| MS.gene059604.t1 | AT1G01390 | 39.934 | 303 | 173 | 7 | 3 | 300 | 22 | 320 | 2.72e-62 | 207 |
| MS.gene059604.t1 | AT5G26310 | 31.229 | 301 | 188 | 11 | 8 | 300 | 9 | 298 | 5.69e-37 | 139 |
| MS.gene059604.t1 | AT3G21790 | 29.073 | 313 | 194 | 7 | 7 | 299 | 5 | 309 | 2.41e-36 | 137 |
| MS.gene059604.t1 | AT3G21780 | 29.808 | 312 | 190 | 8 | 4 | 299 | 2 | 300 | 3.46e-36 | 137 |
| MS.gene059604.t1 | AT3G50740 | 31.677 | 322 | 174 | 13 | 3 | 300 | 4 | 303 | 3.96e-36 | 137 |
| MS.gene059604.t1 | AT5G66690 | 32.177 | 317 | 164 | 15 | 8 | 300 | 9 | 298 | 9.09e-36 | 135 |
| MS.gene059604.t1 | AT3G16520 | 31.683 | 303 | 195 | 8 | 7 | 300 | 6 | 305 | 9.64e-35 | 132 |
| MS.gene059604.t1 | AT3G16520 | 31.683 | 303 | 195 | 8 | 7 | 300 | 6 | 305 | 9.82e-35 | 132 |
| MS.gene059604.t1 | AT3G16520 | 31.683 | 303 | 195 | 8 | 7 | 300 | 6 | 305 | 1.20e-34 | 132 |
| MS.gene059604.t1 | AT1G07250 | 28.615 | 325 | 197 | 10 | 1 | 299 | 1 | 316 | 2.84e-34 | 131 |
| MS.gene059604.t1 | AT3G21800 | 29.712 | 313 | 196 | 8 | 3 | 299 | 2 | 306 | 9.38e-34 | 130 |
| MS.gene059604.t1 | AT2G18570 | 32.026 | 306 | 183 | 13 | 9 | 300 | 8 | 302 | 1.60e-33 | 129 |
| MS.gene059604.t1 | AT2G29730 | 28.852 | 305 | 198 | 8 | 10 | 299 | 9 | 309 | 4.94e-33 | 128 |
| MS.gene059604.t1 | AT3G21750 | 29.180 | 305 | 199 | 8 | 4 | 299 | 2 | 298 | 6.61e-33 | 127 |
| MS.gene059604.t1 | AT1G07260 | 29.283 | 321 | 195 | 10 | 2 | 299 | 4 | 315 | 1.01e-32 | 127 |
| MS.gene059604.t1 | AT4G36770 | 30.868 | 311 | 179 | 11 | 8 | 300 | 6 | 298 | 3.06e-32 | 125 |
| MS.gene059604.t1 | AT2G29710 | 28.754 | 313 | 204 | 8 | 1 | 299 | 1 | 308 | 7.36e-32 | 125 |
| MS.gene059604.t1 | AT1G07240 | 28.308 | 325 | 203 | 9 | 10 | 313 | 9 | 324 | 1.18e-29 | 119 |
| MS.gene059604.t1 | AT2G29750 | 30.503 | 318 | 188 | 13 | 7 | 299 | 9 | 318 | 7.10e-29 | 116 |
| MS.gene059604.t1 | AT2G29740 | 29.712 | 313 | 191 | 10 | 10 | 299 | 12 | 318 | 1.52e-28 | 115 |
| MS.gene059604.t1 | AT3G21760 | 27.607 | 326 | 191 | 10 | 4 | 299 | 2 | 312 | 3.05e-27 | 112 |
| MS.gene059604.t1 | AT4G15280 | 27.832 | 309 | 205 | 10 | 4 | 299 | 2 | 305 | 4.40e-27 | 111 |
| MS.gene059604.t1 | AT4G15280 | 27.832 | 309 | 205 | 10 | 4 | 299 | 34 | 337 | 5.17e-27 | 111 |
| MS.gene059604.t1 | AT4G15260 | 31.383 | 188 | 122 | 3 | 116 | 299 | 1 | 185 | 6.92e-26 | 106 |
| MS.gene059604.t1 | AT2G18560 | 31.481 | 216 | 126 | 7 | 96 | 300 | 8 | 212 | 2.83e-22 | 97.1 |
| MS.gene059604.t1 | AT4G34135 | 26.536 | 358 | 212 | 12 | 3 | 325 | 8 | 349 | 5.31e-20 | 91.3 |
| MS.gene059604.t1 | AT4G34135 | 26.506 | 332 | 193 | 12 | 4 | 300 | 9 | 324 | 1.38e-19 | 88.6 |
| MS.gene059604.t1 | AT1G05675 | 28.349 | 321 | 193 | 13 | 1 | 300 | 1 | 305 | 3.15e-19 | 89.0 |
| MS.gene059604.t1 | AT4G34131 | 28.070 | 228 | 132 | 6 | 92 | 300 | 109 | 323 | 3.62e-19 | 89.0 |
| MS.gene059604.t1 | AT2G36800 | 25.484 | 310 | 197 | 10 | 16 | 300 | 22 | 322 | 1.22e-18 | 87.4 |
| MS.gene059604.t1 | AT2G30140 | 27.302 | 315 | 198 | 10 | 7 | 307 | 14 | 311 | 1.64e-18 | 86.7 |
| MS.gene059604.t1 | AT1G22360 | 26.923 | 338 | 192 | 13 | 3 | 300 | 7 | 329 | 2.52e-18 | 86.3 |
| MS.gene059604.t1 | AT1G22360 | 26.923 | 338 | 192 | 13 | 3 | 300 | 7 | 329 | 3.71e-18 | 85.9 |
| MS.gene059604.t1 | AT2G30140 | 27.302 | 315 | 197 | 11 | 7 | 307 | 14 | 310 | 4.08e-18 | 85.5 |
| MS.gene059604.t1 | AT2G36780 | 26.415 | 318 | 197 | 12 | 9 | 300 | 17 | 323 | 1.20e-17 | 84.3 |
| MS.gene059604.t1 | AT3G46650 | 24.444 | 315 | 199 | 9 | 1 | 306 | 5 | 289 | 1.82e-17 | 83.6 |
| MS.gene059604.t1 | AT2G36770 | 25.407 | 307 | 200 | 11 | 16 | 300 | 24 | 323 | 6.50e-17 | 82.0 |
| MS.gene059604.t1 | AT3G55700 | 24.437 | 311 | 200 | 10 | 7 | 300 | 9 | 301 | 2.07e-16 | 80.5 |
| MS.gene059604.t1 | AT1G10400 | 25.806 | 372 | 226 | 14 | 4 | 344 | 5 | 357 | 2.11e-16 | 80.5 |
| MS.gene059604.t1 | AT5G38010 | 27.500 | 320 | 191 | 12 | 2 | 300 | 6 | 305 | 2.28e-16 | 80.5 |
| MS.gene059604.t1 | AT2G15480 | 25.670 | 261 | 160 | 7 | 91 | 333 | 108 | 352 | 2.31e-16 | 80.5 |
| MS.gene059604.t1 | AT2G15480 | 25.670 | 261 | 160 | 7 | 91 | 333 | 108 | 352 | 2.48e-16 | 80.5 |
| MS.gene059604.t1 | AT3G55710 | 24.601 | 313 | 201 | 9 | 7 | 300 | 9 | 305 | 4.93e-16 | 79.3 |
| MS.gene059604.t1 | AT2G15490 | 26.786 | 280 | 162 | 9 | 74 | 325 | 86 | 350 | 5.39e-16 | 79.3 |
| MS.gene059604.t1 | AT3G46690 | 25.000 | 312 | 201 | 9 | 4 | 300 | 7 | 300 | 5.47e-16 | 79.3 |
| MS.gene059604.t1 | AT1G22340 | 25.526 | 333 | 195 | 13 | 7 | 300 | 14 | 332 | 1.04e-15 | 78.6 |
| MS.gene059604.t1 | AT1G05680 | 25.312 | 320 | 204 | 12 | 1 | 300 | 1 | 305 | 2.20e-15 | 77.4 |
| MS.gene059604.t1 | AT5G59590 | 25.243 | 309 | 205 | 9 | 3 | 300 | 7 | 300 | 2.89e-15 | 77.0 |
| MS.gene059604.t1 | AT2G15490 | 27.076 | 277 | 162 | 9 | 74 | 325 | 86 | 347 | 4.14e-15 | 76.6 |
| MS.gene059604.t1 | AT3G46670 | 28.289 | 304 | 194 | 11 | 7 | 300 | 10 | 299 | 4.28e-15 | 76.6 |
| MS.gene059604.t1 | AT1G22380 | 25.291 | 344 | 192 | 17 | 2 | 300 | 9 | 332 | 5.09e-15 | 76.3 |
| MS.gene059604.t1 | AT1G22400 | 26.923 | 338 | 185 | 16 | 7 | 300 | 14 | 333 | 6.89e-15 | 75.9 |
| MS.gene059604.t1 | AT1G22370 | 24.405 | 336 | 190 | 13 | 7 | 300 | 14 | 327 | 8.10e-15 | 75.9 |
| MS.gene059604.t1 | AT5G38040 | 25.763 | 295 | 196 | 11 | 16 | 300 | 20 | 301 | 8.79e-15 | 75.5 |
| MS.gene059604.t1 | AT2G16890 | 26.524 | 328 | 209 | 13 | 7 | 312 | 10 | 327 | 1.17e-14 | 75.1 |
| MS.gene059604.t1 | AT2G30150 | 25.786 | 318 | 200 | 14 | 7 | 307 | 14 | 312 | 1.38e-14 | 75.1 |
| MS.gene059604.t1 | AT2G16890 | 26.524 | 328 | 209 | 13 | 7 | 312 | 10 | 327 | 1.39e-14 | 75.1 |
| MS.gene059604.t1 | AT2G36760 | 25.157 | 318 | 201 | 12 | 9 | 300 | 17 | 323 | 1.79e-14 | 74.7 |
| MS.gene059604.t1 | AT2G30150 | 26.032 | 315 | 197 | 14 | 10 | 307 | 1 | 296 | 1.87e-14 | 74.7 |
| MS.gene059604.t1 | AT5G37950 | 30.769 | 208 | 121 | 8 | 103 | 300 | 77 | 271 | 2.11e-14 | 73.9 |
| MS.gene059604.t1 | AT2G36750 | 24.351 | 308 | 201 | 11 | 16 | 300 | 20 | 318 | 3.51e-14 | 73.9 |
| MS.gene059604.t1 | AT5G37950 | 30.952 | 210 | 124 | 8 | 103 | 300 | 77 | 277 | 5.63e-14 | 72.4 |
| MS.gene059604.t1 | AT1G78270 | 26.724 | 348 | 193 | 17 | 10 | 316 | 17 | 343 | 8.62e-14 | 72.8 |
| MS.gene059604.t1 | AT5G59580 | 24.675 | 308 | 205 | 10 | 4 | 300 | 7 | 298 | 1.28e-13 | 72.0 |
| MS.gene059604.t1 | AT5G14860 | 24.207 | 347 | 216 | 11 | 17 | 337 | 19 | 344 | 1.42e-13 | 72.0 |
| MS.gene059604.t1 | AT2G36970 | 25.116 | 215 | 146 | 7 | 98 | 300 | 109 | 320 | 2.39e-13 | 71.2 |
| MS.gene059604.t1 | AT3G02100 | 21.713 | 327 | 204 | 11 | 7 | 300 | 14 | 321 | 2.49e-13 | 71.2 |
| MS.gene059604.t1 | AT5G03490 | 24.501 | 351 | 212 | 13 | 7 | 327 | 20 | 347 | 4.79e-13 | 70.5 |
| MS.gene059604.t1 | AT2G22590 | 25.538 | 325 | 195 | 15 | 3 | 300 | 12 | 316 | 6.30e-13 | 70.1 |
| MS.gene059604.t1 | AT2G31750 | 35.652 | 115 | 58 | 3 | 209 | 309 | 202 | 314 | 8.33e-13 | 69.7 |
| MS.gene059604.t1 | AT3G46680 | 26.198 | 313 | 202 | 10 | 1 | 300 | 4 | 300 | 8.82e-13 | 69.3 |
| MS.gene059604.t1 | AT2G31750 | 35.652 | 115 | 58 | 3 | 209 | 309 | 202 | 314 | 9.06e-13 | 69.7 |
| MS.gene059604.t1 | AT3G46700 | 24.759 | 311 | 198 | 9 | 4 | 300 | 7 | 295 | 1.31e-12 | 68.9 |
| MS.gene059604.t1 | AT5G12890 | 25.545 | 321 | 199 | 13 | 7 | 300 | 11 | 318 | 2.47e-12 | 68.2 |
| MS.gene059604.t1 | AT4G15550 | 29.577 | 213 | 121 | 7 | 109 | 307 | 123 | 320 | 2.91e-12 | 67.8 |
| MS.gene059604.t1 | AT2G31790 | 27.189 | 217 | 114 | 8 | 111 | 299 | 106 | 306 | 3.08e-12 | 67.8 |
| MS.gene059604.t1 | AT1G22370 | 34.286 | 105 | 54 | 3 | 210 | 300 | 54 | 157 | 4.54e-12 | 66.6 |
| MS.gene059604.t1 | AT4G34138 | 25.086 | 291 | 166 | 11 | 61 | 327 | 90 | 352 | 5.52e-12 | 67.0 |
| MS.gene059604.t1 | AT3G53150 | 23.901 | 364 | 235 | 13 | 9 | 339 | 25 | 379 | 5.97e-12 | 67.0 |
| MS.gene059604.t1 | AT3G53160 | 24.765 | 319 | 201 | 12 | 9 | 300 | 11 | 317 | 6.69e-12 | 67.0 |
| MS.gene059604.t1 | AT5G49690 | 22.977 | 309 | 213 | 7 | 7 | 300 | 11 | 309 | 7.00e-12 | 66.6 |
| MS.gene059604.t1 | AT2G36790 | 26.074 | 326 | 188 | 14 | 9 | 300 | 16 | 322 | 7.12e-12 | 66.6 |
| MS.gene059604.t1 | AT1G51210 | 26.984 | 315 | 193 | 13 | 4 | 300 | 18 | 313 | 8.66e-12 | 66.2 |
| MS.gene059604.t1 | AT1G05560 | 25.316 | 316 | 192 | 12 | 9 | 305 | 8 | 298 | 2.16e-11 | 65.1 |
| MS.gene059604.t1 | AT2G28080 | 27.568 | 185 | 123 | 6 | 124 | 300 | 142 | 323 | 2.19e-11 | 65.5 |
| MS.gene059604.t1 | AT1G05560 | 25.316 | 316 | 192 | 12 | 9 | 305 | 58 | 348 | 2.60e-11 | 65.1 |
| MS.gene059604.t1 | AT3G46660 | 26.861 | 309 | 200 | 11 | 4 | 300 | 12 | 306 | 7.16e-11 | 63.5 |
Find 62 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCAATACTTTCAGTAATT+TGG | 0.100876 | 6.4:+60956750 | MS.gene059604:CDS |
| CAAACATGTTAGTGTGTTTA+AGG | 0.162130 | 6.4:+60956863 | MS.gene059604:CDS |
| ATGAGTTTCATTTGTGTTGC+AGG | 0.264646 | 6.4:-60956355 | None:intergenic |
| CAACTCAATGAGTTAGCTTT+TGG | 0.270638 | 6.4:+60956958 | MS.gene059604:CDS |
| CATGATTCTCTTTATAGCTT+TGG | 0.310224 | 6.4:-60957364 | None:intergenic |
| TATGAAATGGTAAATGTTCC+TGG | 0.319016 | 6.4:+60956607 | MS.gene059604:CDS |
| TCTCTCTTGAAGAAACCTTA+TGG | 0.320411 | 6.4:-60956782 | None:intergenic |
| TGAAGAAACCTTATGGCTTC+CGG | 0.352971 | 6.4:-60956775 | None:intergenic |
| TTTACTTCATCATGAAGAAA+TGG | 0.375355 | 6.4:-60956394 | None:intergenic |
| CACATCAAGAATTGATTTGT+AGG | 0.382627 | 6.4:-60956695 | None:intergenic |
| TTTGACTCATTTCTAATGAT+AGG | 0.384201 | 6.4:-60956832 | None:intergenic |
| CTTGATCTTTCACAGTTAAA+CGG | 0.397927 | 6.4:-60956667 | None:intergenic |
| CTTAGAGTCAAGTTATGAAA+TGG | 0.404715 | 6.4:+60956594 | MS.gene059604:CDS |
| TTCCATGTCAAAGAGCTTCC+CGG | 0.406355 | 6.4:+60956643 | MS.gene059604:CDS |
| TTGATCTTTCACAGTTAAAC+GGG | 0.428058 | 6.4:-60956666 | None:intergenic |
| CAAGCAGCTTCATCAAGGTT+TGG | 0.430065 | 6.4:-60956562 | None:intergenic |
| TAAGTGAGCATGGTTCTTCT+AGG | 0.434640 | 6.4:+60957454 | MS.gene059604:CDS |
| AGAACAATGAAGTTCATGTT+TGG | 0.436205 | 6.4:-60956292 | None:intergenic |
| TACTTTCAGTAATTTGGAAC+CGG | 0.436232 | 6.4:+60956756 | MS.gene059604:CDS |
| AAAAGAAAAGGTAAGACAAA+AGG | 0.448905 | 6.4:-60956501 | None:intergenic |
| GTTAGTGTGTTTAAGGTGGT+TGG | 0.466646 | 6.4:+60956870 | MS.gene059604:CDS |
| GATTGCATGGAAGGAGTTAG+TGG | 0.480920 | 6.4:-60956250 | None:intergenic |
| ATTTGGAACCGGAAGCCATA+AGG | 0.482874 | 6.4:+60956767 | MS.gene059604:CDS |
| ACAATGAAGTTCATGTTTGG+TGG | 0.496235 | 6.4:-60956289 | None:intergenic |
| CATGGTACTCGTTGTGATGT+TGG | 0.496626 | 6.4:-60956201 | None:intergenic |
| CTTTCACAGTTAAACGGGCC+GGG | 0.497981 | 6.4:-60956661 | None:intergenic |
| TTCAAGATGGATTGCATGGA+AGG | 0.499118 | 6.4:-60956259 | None:intergenic |
| ACTCAACTTGTGGAATCAAA+TGG | 0.508563 | 6.4:-60956162 | None:intergenic |
| AAGGTCTTCAATGTTGACTT+GGG | 0.511276 | 6.4:-60956317 | None:intergenic |
| CAGCTCCTGAAGAAAAGAAA+AGG | 0.514556 | 6.4:-60956513 | None:intergenic |
| GAGTGGTCACAAGTTCTTGT+GGG | 0.517451 | 6.4:+60956990 | MS.gene059604:CDS |
| ATTGCTATGGTTCCTTCACC+TGG | 0.517578 | 6.4:+60956133 | MS.gene059604:CDS |
| TTTCTAATGATAGGTCCAAC+CGG | 0.524631 | 6.4:-60956823 | None:intergenic |
| AGGAGTTAGTGGACCGAGTG+TGG | 0.529516 | 6.4:-60956239 | None:intergenic |
| AAACCTAGTGTTTATCCGGT+TGG | 0.530377 | 6.4:+60956808 | MS.gene059604:CDS |
| CAAAGCTATAAAGAGAATCA+TGG | 0.532183 | 6.4:+60957365 | MS.gene059604:CDS |
| GAGTACAAGCAGCTTCATCA+AGG | 0.541797 | 6.4:-60956567 | None:intergenic |
| GTGGACCGAGTGTGGGAATG+AGG | 0.542676 | 6.4:-60956231 | None:intergenic |
| GAAGGTCTTCAATGTTGACT+TGG | 0.545743 | 6.4:-60956318 | None:intergenic |
| GGAAGCTCTTTGACATGGAA+AGG | 0.546640 | 6.4:-60956640 | None:intergenic |
| GGAATCAAATGGCTCAGTCC+AGG | 0.554575 | 6.4:-60956151 | None:intergenic |
| AGTATTCAAGATGGATTGCA+TGG | 0.555407 | 6.4:-60956263 | None:intergenic |
| CAGGTTCAAGATTATGTGGA+AGG | 0.557674 | 6.4:-60956336 | None:intergenic |
| GTTGCAGGTTCAAGATTATG+TGG | 0.558142 | 6.4:-60956340 | None:intergenic |
| TCTTTCACAGTTAAACGGGC+CGG | 0.558439 | 6.4:-60956662 | None:intergenic |
| AAAATCAAAGAATTGAGTGT+TGG | 0.569192 | 6.4:+60957417 | MS.gene059604:CDS |
| TTTAGCAACATCGTGTGCAT+CGG | 0.569814 | 6.4:-60956470 | None:intergenic |
| TGGTGGAAGAGTATTCAAGA+TGG | 0.578263 | 6.4:-60956272 | None:intergenic |
| GAACAAGACATGCATTGCTA+TGG | 0.581310 | 6.4:+60956120 | MS.gene059604:CDS |
| ACATTCCTCATTCCCACACT+CGG | 0.590307 | 6.4:+60956226 | MS.gene059604:CDS |
| TGAGTGGTCACAAGTTCTTG+TGG | 0.592749 | 6.4:+60956989 | MS.gene059604:CDS |
| AAATGGCTCAGTCCAGGTGA+AGG | 0.593894 | 6.4:-60956145 | None:intergenic |
| TCTCTACTCTAGCATTGAAG+TGG | 0.606601 | 6.4:+60957484 | MS.gene059604:CDS |
| GGCCGGGAAGCTCTTTGACA+TGG | 0.608641 | 6.4:-60956645 | None:intergenic |
| GGAGTTAGTGGACCGAGTGT+GGG | 0.613001 | 6.4:-60956238 | None:intergenic |
| GCTATAAAGAGAATCATGGA+AGG | 0.638274 | 6.4:+60957369 | MS.gene059604:CDS |
| ACATGTTAGTGTGTTTAAGG+TGG | 0.646806 | 6.4:+60956866 | MS.gene059604:CDS |
| GAAACTGTACTAAGTGAGCA+TGG | 0.648272 | 6.4:+60957444 | MS.gene059604:CDS |
| AGGTCTTCAATGTTGACTTG+GGG | 0.654290 | 6.4:-60956316 | None:intergenic |
| GGTCCAACCGGATAAACACT+AGG | 0.660497 | 6.4:-60956811 | None:intergenic |
| TGCTGCAGACTAAAGCAACA+AGG | 0.709727 | 6.4:-60956438 | None:intergenic |
| TGGGAATGAGGAATGTGACA+TGG | 0.746827 | 6.4:-60956219 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCAATACTTTCAGTAATT+TGG | + | chr6.4:60956750-60956769 | MS.gene059604:CDS | 20.0% |
| !! | TTAGAAAGAACAAAAGATAA+GGG | + | chr6.4:60957099-60957118 | MS.gene059604:intron | 20.0% |
| !! | TTTAGAAAGAACAAAAGATA+AGG | + | chr6.4:60957098-60957117 | MS.gene059604:intron | 20.0% |
| !!! | TCTGTTATTTTTGTATCTTT+TGG | + | chr6.4:60956910-60956929 | MS.gene059604:CDS | 20.0% |
| ! | AAAAGAAAAGGTAAGACAAA+AGG | - | chr6.4:60956504-60956523 | None:intergenic | 25.0% |
| ! | AAAATCAAAGAATTGAGTGT+TGG | + | chr6.4:60957417-60957436 | MS.gene059604:CDS | 25.0% |
| ! | CAAAAATCATCATTGTTTGA+TGG | + | chr6.4:60956721-60956740 | MS.gene059604:CDS | 25.0% |
| ! | GATACAAAAATAACAGAACT+TGG | - | chr6.4:60956907-60956926 | None:intergenic | 25.0% |
| ! | TTTACTTCATCATGAAGAAA+TGG | - | chr6.4:60956397-60956416 | None:intergenic | 25.0% |
| ! | TTTGACTCATTTCTAATGAT+AGG | - | chr6.4:60956835-60956854 | None:intergenic | 25.0% |
| !! | GTTCTTTCTAAAAAACCATT+TGG | - | chr6.4:60957090-60957109 | None:intergenic | 25.0% |
| !!! | ATTTTTGTATCTTTTGGAAG+TGG | + | chr6.4:60956916-60956935 | MS.gene059604:CDS | 25.0% |
| AACAAAAGATAAGGGATTAG+TGG | + | chr6.4:60957107-60957126 | MS.gene059604:intron | 30.0% | |
| ACAAAAATAACAGAACTTGG+TGG | - | chr6.4:60956904-60956923 | None:intergenic | 30.0% | |
| AGAAAAACCTAGTGTTTATC+CGG | + | chr6.4:60956804-60956823 | MS.gene059604:CDS | 30.0% | |
| AGAACAATGAAGTTCATGTT+TGG | - | chr6.4:60956295-60956314 | None:intergenic | 30.0% | |
| CAAACATGTTAGTGTGTTTA+AGG | + | chr6.4:60956863-60956882 | MS.gene059604:CDS | 30.0% | |
| CAAAGCTATAAAGAGAATCA+TGG | + | chr6.4:60957365-60957384 | MS.gene059604:CDS | 30.0% | |
| CATGATTCTCTTTATAGCTT+TGG | - | chr6.4:60957367-60957386 | None:intergenic | 30.0% | |
| CCATTTGGTAAATACTCTAA+TGG | - | chr6.4:60957075-60957094 | None:intergenic | 30.0% | |
| CTTAGAGTCAAGTTATGAAA+TGG | + | chr6.4:60956594-60956613 | MS.gene059604:CDS | 30.0% | |
| CTTGATCTTTCACAGTTAAA+CGG | - | chr6.4:60956670-60956689 | None:intergenic | 30.0% | |
| TATGAAATGGTAAATGTTCC+TGG | + | chr6.4:60956607-60956626 | MS.gene059604:CDS | 30.0% | |
| TTGATCTTTCACAGTTAAAC+GGG | - | chr6.4:60956669-60956688 | None:intergenic | 30.0% | |
| ! | CCATTAGAGTATTTACCAAA+TGG | + | chr6.4:60957072-60957091 | MS.gene059604:intron | 30.0% |
| ! | TACTTTCAGTAATTTGGAAC+CGG | + | chr6.4:60956756-60956775 | MS.gene059604:CDS | 30.0% |
| ! | TCTTACCTTTTCTTTTCTTC+AGG | + | chr6.4:60956508-60956527 | MS.gene059604:CDS | 30.0% |
| !! | CACATCAAGAATTGATTTGT+AGG | - | chr6.4:60956698-60956717 | None:intergenic | 30.0% |
| !!! | CAACAAGGTTAGTTTTTGAA+AGG | - | chr6.4:60956426-60956445 | None:intergenic | 30.0% |
| !!! | GTTTTTTAAGTCATTGTGGT+TGG | + | chr6.4:60957181-60957200 | MS.gene059604:intron | 30.0% |
| !!! | TCTAGTTCTGCTTATTTTAG+TGG | + | chr6.4:60957036-60957055 | MS.gene059604:intron | 30.0% |
| ACAATGAAGTTCATGTTTGG+TGG | - | chr6.4:60956292-60956311 | None:intergenic | 35.0% | |
| ACATGTTAGTGTGTTTAAGG+TGG | + | chr6.4:60956866-60956885 | MS.gene059604:CDS | 35.0% | |
| ACTCAACTTGTGGAATCAAA+TGG | - | chr6.4:60956165-60956184 | None:intergenic | 35.0% | |
| ATGAGTTTCATTTGTGTTGC+AGG | - | chr6.4:60956358-60956377 | None:intergenic | 35.0% | |
| ATTCTTGGTCATGGATCAAT+TGG | + | chr6.4:60957156-60957175 | MS.gene059604:intron | 35.0% | |
| GCAGAACTAGAATGTTTACT+TGG | - | chr6.4:60957027-60957046 | None:intergenic | 35.0% | |
| GCTATAAAGAGAATCATGGA+AGG | + | chr6.4:60957369-60957388 | MS.gene059604:CDS | 35.0% | |
| TCTCTCTTGAAGAAACCTTA+TGG | - | chr6.4:60956785-60956804 | None:intergenic | 35.0% | |
| TGGAAAGGAATAGAAAAACC+AGG | - | chr6.4:60956628-60956647 | None:intergenic | 35.0% | |
| TTTCTAATGATAGGTCCAAC+CGG | - | chr6.4:60956826-60956845 | None:intergenic | 35.0% | |
| ! | AGTTTTGCAAACTCAACTTG+TGG | - | chr6.4:60956175-60956194 | None:intergenic | 35.0% |
| !! | AAGGTCTTCAATGTTGACTT+GGG | - | chr6.4:60956320-60956339 | None:intergenic | 35.0% |
| !! | AGTATTCAAGATGGATTGCA+TGG | - | chr6.4:60956266-60956285 | None:intergenic | 35.0% |
| !! | TTCCTCTCGTTTTATTATCC+CGG | - | chr6.4:60957340-60957359 | None:intergenic | 35.0% |
| !! | TTTGTATCTTTTGGAAGTGG+TGG | + | chr6.4:60956919-60956938 | MS.gene059604:CDS | 35.0% |
| !!! | CAACTCAATGAGTTAGCTTT+TGG | + | chr6.4:60956958-60956977 | MS.gene059604:CDS | 35.0% |
| !!! | GGTGGTTTTTTAAGTCATTG+TGG | + | chr6.4:60957177-60957196 | MS.gene059604:intron | 35.0% |
| AAACCTAGTGTTTATCCGGT+TGG | + | chr6.4:60956808-60956827 | MS.gene059604:CDS | 40.0% | |
| AACAATGGCCATGCAATCAA+TGG | - | chr6.4:60957240-60957259 | None:intergenic | 40.0% | |
| AACCGGGATAATAAAACGAG+AGG | + | chr6.4:60957335-60957354 | MS.gene059604:intron | 40.0% | |
| ATCCTTTGCTCTGCAAACAA+TGG | - | chr6.4:60957255-60957274 | None:intergenic | 40.0% | |
| CAGCTCCTGAAGAAAAGAAA+AGG | - | chr6.4:60956516-60956535 | None:intergenic | 40.0% | |
| CAGGTTCAAGATTATGTGGA+AGG | - | chr6.4:60956339-60956358 | None:intergenic | 40.0% | |
| GAAACTGTACTAAGTGAGCA+TGG | + | chr6.4:60957444-60957463 | MS.gene059604:CDS | 40.0% | |
| GAACAAGACATGCATTGCTA+TGG | + | chr6.4:60956120-60956139 | MS.gene059604:CDS | 40.0% | |
| GTTGCAGGTTCAAGATTATG+TGG | - | chr6.4:60956343-60956362 | None:intergenic | 40.0% | |
| TAAGTGAGCATGGTTCTTCT+AGG | + | chr6.4:60957454-60957473 | MS.gene059604:CDS | 40.0% | |
| TGAAGAAACCTTATGGCTTC+CGG | - | chr6.4:60956778-60956797 | None:intergenic | 40.0% | |
| TGACCAAGAATCTCAACTTG+CGG | - | chr6.4:60957147-60957166 | None:intergenic | 40.0% | |
| TTGTGGTTGGAGTTCAACTT+TGG | + | chr6.4:60957194-60957213 | MS.gene059604:intron | 40.0% | |
| TTTAGCAACATCGTGTGCAT+CGG | - | chr6.4:60956473-60956492 | None:intergenic | 40.0% | |
| ! | ACTTTGGAGAGTGTGGTTAA+TGG | + | chr6.4:60957210-60957229 | MS.gene059604:intron | 40.0% |
| ! | AGGGATTAGTGGTTACATCA+TGG | + | chr6.4:60957118-60957137 | MS.gene059604:intron | 40.0% |
| ! | CAAGTTGAGATTCTTGGTCA+TGG | + | chr6.4:60957147-60957166 | MS.gene059604:intron | 40.0% |
| ! | GAAGGTCTTCAATGTTGACT+TGG | - | chr6.4:60956321-60956340 | None:intergenic | 40.0% |
| ! | GGGATTAGTGGTTACATCAT+GGG | + | chr6.4:60957119-60957138 | MS.gene059604:intron | 40.0% |
| ! | GTTAGTGTGTTTAAGGTGGT+TGG | + | chr6.4:60956870-60956889 | MS.gene059604:CDS | 40.0% |
| ! | TCTCTACTCTAGCATTGAAG+TGG | + | chr6.4:60957484-60957503 | MS.gene059604:CDS | 40.0% |
| !! | AGGTCTTCAATGTTGACTTG+GGG | - | chr6.4:60956319-60956338 | None:intergenic | 40.0% |
| !! | CAAAGGTTGATGATGAAACC+GGG | + | chr6.4:60957319-60957338 | MS.gene059604:intron | 40.0% |
| !! | CCAAAGGTTGATGATGAAAC+CGG | + | chr6.4:60957318-60957337 | MS.gene059604:intron | 40.0% |
| !! | GCTTTTGGTCTAGAATTGAG+TGG | + | chr6.4:60956973-60956992 | MS.gene059604:CDS | 40.0% |
| !! | TGGTGGAAGAGTATTCAAGA+TGG | - | chr6.4:60956275-60956294 | None:intergenic | 40.0% |
| !! | TTCAAGATGGATTGCATGGA+AGG | - | chr6.4:60956262-60956281 | None:intergenic | 40.0% |
| ACATTCCTCATTCCCACACT+CGG | + | chr6.4:60956226-60956245 | MS.gene059604:CDS | 45.0% | |
| ACTCACTGATGTGCTCAAAG+TGG | + | chr6.4:60957287-60957306 | MS.gene059604:intron | 45.0% | |
| ATGTGCTCAAAGTGGCAGTA+AGG | + | chr6.4:60957295-60957314 | MS.gene059604:intron | 45.0% | |
| ATTGCTATGGTTCCTTCACC+TGG | + | chr6.4:60956133-60956152 | MS.gene059604:CDS | 45.0% | |
| CAAGCAGCTTCATCAAGGTT+TGG | - | chr6.4:60956565-60956584 | None:intergenic | 45.0% | |
| CATGGTACTCGTTGTGATGT+TGG | - | chr6.4:60956204-60956223 | None:intergenic | 45.0% | |
| CCGGTTTCATCATCAACCTT+TGG | - | chr6.4:60957321-60957340 | None:intergenic | 45.0% | |
| CTTGGTCATGGATCAATTGG+TGG | + | chr6.4:60957159-60957178 | MS.gene059604:intron | 45.0% | |
| GAGTACAAGCAGCTTCATCA+AGG | - | chr6.4:60956570-60956589 | None:intergenic | 45.0% | |
| GAGTGGTCACAAGTTCTTGT+GGG | + | chr6.4:60956990-60957009 | MS.gene059604:CDS | 45.0% | |
| GATTGCATGGAAGGAGTTAG+TGG | - | chr6.4:60956253-60956272 | None:intergenic | 45.0% | |
| GGAAGCTCTTTGACATGGAA+AGG | - | chr6.4:60956643-60956662 | None:intergenic | 45.0% | |
| TCTTTCACAGTTAAACGGGC+CGG | - | chr6.4:60956665-60956684 | None:intergenic | 45.0% | |
| TGAGTGGTCACAAGTTCTTG+TGG | + | chr6.4:60956989-60957008 | MS.gene059604:CDS | 45.0% | |
| TGCTGCAGACTAAAGCAACA+AGG | - | chr6.4:60956441-60956460 | None:intergenic | 45.0% | |
| TGGGAATGAGGAATGTGACA+TGG | - | chr6.4:60956222-60956241 | None:intergenic | 45.0% | |
| TTCCATGTCAAAGAGCTTCC+CGG | + | chr6.4:60956643-60956662 | MS.gene059604:CDS | 45.0% | |
| ! | ATGGCGTACCATTGATTGCA+TGG | + | chr6.4:60957229-60957248 | MS.gene059604:intron | 45.0% |
| ! | ATTTGGAACCGGAAGCCATA+AGG | + | chr6.4:60956767-60956786 | MS.gene059604:CDS | 45.0% |
| ! | GAGTTCAACTTTGGAGAGTG+TGG | + | chr6.4:60957203-60957222 | MS.gene059604:intron | 45.0% |
| AAATGGCTCAGTCCAGGTGA+AGG | - | chr6.4:60956148-60956167 | None:intergenic | 50.0% | |
| CAAAGTGGCAGTAAGGCCAA+AGG | + | chr6.4:60957302-60957321 | MS.gene059604:intron | 50.0% | |
| CTTTCACAGTTAAACGGGCC+GGG | - | chr6.4:60956664-60956683 | None:intergenic | 50.0% | |
| GGAATCAAATGGCTCAGTCC+AGG | - | chr6.4:60956154-60956173 | None:intergenic | 50.0% | |
| GGCCATTGTTTGCAGAGCAA+AGG | + | chr6.4:60957250-60957269 | MS.gene059604:intron | 50.0% | |
| GGTCCAACCGGATAAACACT+AGG | - | chr6.4:60956814-60956833 | None:intergenic | 50.0% | |
| ! | GCACCGCAAGTTGAGATTCT+TGG | + | chr6.4:60957141-60957160 | MS.gene059604:intron | 50.0% |
| ! | AGGAGTTAGTGGACCGAGTG+TGG | - | chr6.4:60956242-60956261 | None:intergenic | 55.0% |
| ! | GGAGTTAGTGGACCGAGTGT+GGG | - | chr6.4:60956241-60956260 | None:intergenic | 55.0% |
| GGCCGGGAAGCTCTTTGACA+TGG | - | chr6.4:60956648-60956667 | None:intergenic | 60.0% | |
| GTGGACCGAGTGTGGGAATG+AGG | - | chr6.4:60956234-60956253 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 60956115 | 60957512 | 60956115 | ID=MS.gene059604 |
| chr6.4 | mRNA | 60956115 | 60957512 | 60956115 | ID=MS.gene059604.t1;Parent=MS.gene059604 |
| chr6.4 | exon | 60956115 | 60957014 | 60956115 | ID=MS.gene059604.t1.exon1;Parent=MS.gene059604.t1 |
| chr6.4 | CDS | 60956115 | 60957014 | 60956115 | ID=cds.MS.gene059604.t1;Parent=MS.gene059604.t1 |
| chr6.4 | exon | 60957357 | 60957512 | 60957357 | ID=MS.gene059604.t1.exon2;Parent=MS.gene059604.t1 |
| chr6.4 | CDS | 60957357 | 60957512 | 60957357 | ID=cds.MS.gene059604.t1;Parent=MS.gene059604.t1 |
| Gene Sequence |
| Protein sequence |
