Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06155.t1 | XP_003630681.1 | 96.1 | 441 | 1 | 1 | 1 | 441 | 1 | 425 | 2.20E-245 | 857.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06155.t1 | Q94AA4 | 79.1 | 440 | 74 | 3 | 1 | 440 | 1 | 422 | 2.3e-203 | 709.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06155.t1 | G7L7C4 | 96.1 | 441 | 1 | 1 | 1 | 441 | 1 | 425 | 1.6e-245 | 857.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057609 | MS.gene06155 | 0.807368 | 5.23E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06155.t1 | MTR_8g102190 | 96.145 | 441 | 1 | 1 | 1 | 441 | 1 | 425 | 0.0 | 870 |
| MS.gene06155.t1 | MTR_8g102190 | 95.630 | 389 | 1 | 1 | 1 | 389 | 1 | 373 | 0.0 | 757 |
| MS.gene06155.t1 | MTR_6g090130 | 82.719 | 434 | 58 | 2 | 7 | 440 | 4 | 420 | 0.0 | 753 |
| MS.gene06155.t1 | MTR_3g110395 | 79.043 | 439 | 75 | 2 | 3 | 441 | 4 | 425 | 0.0 | 731 |
| MS.gene06155.t1 | MTR_8g102190 | 95.442 | 373 | 1 | 1 | 1 | 373 | 1 | 357 | 0.0 | 724 |
| MS.gene06155.t1 | MTR_2g100710 | 74.883 | 426 | 90 | 2 | 16 | 441 | 16 | 424 | 0.0 | 658 |
| MS.gene06155.t1 | MTR_1g090300 | 69.104 | 424 | 114 | 2 | 17 | 440 | 84 | 490 | 0.0 | 619 |
| MS.gene06155.t1 | MTR_2g100710 | 75.000 | 356 | 73 | 1 | 18 | 373 | 18 | 357 | 0.0 | 551 |
| MS.gene06155.t1 | MTR_4g134290 | 54.118 | 425 | 168 | 7 | 20 | 440 | 27 | 428 | 4.08e-161 | 462 |
| MS.gene06155.t1 | MTR_8g069040 | 47.826 | 437 | 192 | 11 | 23 | 439 | 78 | 498 | 6.90e-127 | 378 |
| MS.gene06155.t1 | MTR_5g032570 | 46.420 | 433 | 204 | 8 | 23 | 439 | 82 | 502 | 1.00e-123 | 370 |
| MS.gene06155.t1 | MTR_2g100670 | 59.341 | 91 | 23 | 1 | 283 | 373 | 31 | 107 | 3.90e-27 | 112 |
| MS.gene06155.t1 | MTR_2g066850 | 74.324 | 74 | 18 | 1 | 182 | 255 | 389 | 461 | 1.03e-23 | 104 |
| MS.gene06155.t1 | MTR_4g062050 | 68.519 | 54 | 17 | 0 | 372 | 425 | 8 | 61 | 8.27e-17 | 78.6 |
| MS.gene06155.t1 | MTR_2g025020 | 26.943 | 193 | 134 | 3 | 107 | 292 | 93 | 285 | 9.19e-12 | 67.4 |
| MS.gene06155.t1 | MTR_4g132700 | 26.667 | 195 | 136 | 3 | 105 | 292 | 95 | 289 | 1.01e-11 | 67.4 |
| MS.gene06155.t1 | MTR_4g079180 | 76.316 | 38 | 9 | 0 | 388 | 425 | 56 | 93 | 1.76e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06155.t1 | AT4G26270 | 79.091 | 440 | 74 | 3 | 1 | 440 | 1 | 422 | 0.0 | 717 |
| MS.gene06155.t1 | AT5G56630 | 77.727 | 440 | 79 | 3 | 1 | 440 | 1 | 421 | 0.0 | 701 |
| MS.gene06155.t1 | AT4G29220 | 76.082 | 439 | 87 | 2 | 3 | 441 | 4 | 424 | 0.0 | 689 |
| MS.gene06155.t1 | AT4G32840 | 76.389 | 432 | 82 | 2 | 10 | 441 | 11 | 422 | 0.0 | 686 |
| MS.gene06155.t1 | AT5G61580 | 70.588 | 425 | 108 | 2 | 17 | 441 | 68 | 475 | 0.0 | 639 |
| MS.gene06155.t1 | AT5G61580 | 70.588 | 425 | 108 | 2 | 17 | 441 | 68 | 475 | 0.0 | 639 |
| MS.gene06155.t1 | AT5G47810 | 56.266 | 391 | 167 | 3 | 54 | 441 | 21 | 410 | 2.08e-161 | 462 |
| MS.gene06155.t1 | AT2G22480 | 48.624 | 436 | 191 | 9 | 23 | 440 | 87 | 507 | 4.94e-131 | 389 |
| MS.gene06155.t1 | AT4G04040 | 28.365 | 208 | 133 | 6 | 97 | 292 | 86 | 289 | 2.99e-13 | 72.0 |
| MS.gene06155.t1 | AT1G12000 | 27.094 | 203 | 141 | 3 | 97 | 292 | 85 | 287 | 4.60e-13 | 71.6 |
Find 102 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATCAACACCTTCAACTTA+TGG | 0.240478 | 4.2:-2966944 | None:intergenic |
| CAATTTCAGGTTTATATAAT+AGG | 0.242241 | 4.2:+2966050 | MS.gene06155:intron |
| GCCTGGACCTTCAAGGAAAA+AGG | 0.253303 | 4.2:-2966754 | None:intergenic |
| GGTTAACGAACTCACATTAA+AGG | 0.274719 | 4.2:-2967786 | None:intergenic |
| CACAAGCAGCAGGATGCTTC+TGG | 0.291444 | 4.2:+2966885 | MS.gene06155:CDS |
| CTGGTCTCAACACCGTTATT+AGG | 0.296986 | 4.2:+2965556 | MS.gene06155:CDS |
| TCAAAGCCTAAAATTGTTAG+AGG | 0.297441 | 4.2:+2964197 | MS.gene06155:CDS |
| ACGCTTATGTATATCATTTA+CGG | 0.322834 | 4.2:-2965864 | None:intergenic |
| TTCTTCAAGATGTTGGACTA+TGG | 0.331798 | 4.2:+2966916 | MS.gene06155:CDS |
| TATGGCGTCAAGAAAGTATT+AGG | 0.339409 | 4.2:+2965606 | MS.gene06155:CDS |
| CCCTCTTGGACTATCTTTGT+TGG | 0.340897 | 4.2:-2965363 | None:intergenic |
| TGTGGACTGTTGCTTAATTC+CGG | 0.359579 | 4.2:+2966725 | MS.gene06155:CDS |
| GAGAGAAGGCTAAAAGAAAA+TGG | 0.369087 | 4.2:+2966795 | MS.gene06155:CDS |
| CTTGCTCAAAGTGCGGTTCA+TGG | 0.385338 | 4.2:+2967701 | MS.gene06155:CDS |
| GGTATAACTCTCAAATATAT+AGG | 0.386324 | 4.2:+2967521 | MS.gene06155:CDS |
| AATCAACACCTTCAACTTAT+GGG | 0.387680 | 4.2:-2966943 | None:intergenic |
| CGACGACGTACTGGTAAATC+TGG | 0.393095 | 4.2:-2964269 | None:intergenic |
| GTATGCCACCCTTGCGAATC+GGG | 0.396191 | 4.2:+2966701 | MS.gene06155:CDS |
| CCTGCTGCTTGTGCATGGAT+TGG | 0.398659 | 4.2:-2966875 | None:intergenic |
| CTTTCTTGACGCCATACATA+TGG | 0.405194 | 4.2:-2965599 | None:intergenic |
| TGGTCTCAACACCGTTATTA+GGG | 0.405636 | 4.2:+2965557 | MS.gene06155:CDS |
| TAGTTGACAGTATTCAAGAT+AGG | 0.412260 | 4.2:+2965936 | MS.gene06155:CDS |
| AACAAACTTCTTCAAGATGT+TGG | 0.415670 | 4.2:+2966909 | MS.gene06155:CDS |
| CGCCGAAAATGTATCCCTCT+TGG | 0.417477 | 4.2:-2965377 | None:intergenic |
| AACGATAGATAACGACATTC+CGG | 0.425629 | 4.2:+2966261 | MS.gene06155:CDS |
| TCAAGATAGGGGAATCAATC+AGG | 0.434104 | 4.2:+2965949 | MS.gene06155:CDS |
| GGTCTCAAGGTTGCAGTTGT+AGG | 0.434255 | 4.2:+2966229 | MS.gene06155:CDS |
| CGATGACAGTGTTCCTCAAA+AGG | 0.434629 | 4.2:+2964615 | MS.gene06155:CDS |
| TGGTAAATCTGGAATGTAAT+CGG | 0.438642 | 4.2:-2964258 | None:intergenic |
| GAAAGTGTTGAAAACGGAAT+AGG | 0.440666 | 4.2:+2966484 | MS.gene06155:CDS |
| AATACTGTCAACTATCTTAG+TGG | 0.440922 | 4.2:-2965927 | None:intergenic |
| GTTAACGAACTCACATTAAA+GGG | 0.444525 | 4.2:-2967785 | None:intergenic |
| AATAGGTGTTGTCAAGTTGA+TGG | 0.445015 | 4.2:+2966501 | MS.gene06155:CDS |
| AAAGACCGCCTGGACCTTCA+AGG | 0.445278 | 4.2:-2966761 | None:intergenic |
| TGATGTGAAGGGAGGATACA+AGG | 0.450448 | 4.2:+2965802 | MS.gene06155:intron |
| CGGCTTTGACACAGCTGTTG+AGG | 0.452847 | 4.2:+2966423 | MS.gene06155:CDS |
| TAGGTTATTGACAAGTCCTT+CGG | 0.454297 | 4.2:+2966403 | MS.gene06155:intron |
| TGGAACAGCTCTAATCATAT+AGG | 0.466766 | 4.2:-2967645 | None:intergenic |
| GAATTAGAACGACGACGTAC+TGG | 0.471715 | 4.2:-2964278 | None:intergenic |
| TTTGCTAAACAGAAGACAAT+GGG | 0.482651 | 4.2:+2967500 | MS.gene06155:CDS |
| GCGTGCCGGACCTCGTCAAA+AGG | 0.485746 | 4.2:+2965397 | MS.gene06155:CDS |
| TGTATGCCACCCTTGCGAAT+CGG | 0.486963 | 4.2:+2966700 | MS.gene06155:CDS |
| AACTTACTTGACAACTGAAT+AGG | 0.487126 | 4.2:-2964481 | None:intergenic |
| GGAGCAATGGCAGGCTACAC+TGG | 0.488276 | 4.2:+2967722 | MS.gene06155:CDS |
| AGTTGACAGTATTCAAGATA+GGG | 0.491907 | 4.2:+2965937 | MS.gene06155:CDS |
| GTTATTAGGGAGTTAGTATG+TGG | 0.496614 | 4.2:+2965570 | MS.gene06155:CDS |
| AAGCGTGGCGGAACTATCCT+TGG | 0.501773 | 4.2:+2965881 | MS.gene06155:CDS |
| AGCATCCTGCTGCTTGTGCA+TGG | 0.502680 | 4.2:-2966880 | None:intergenic |
| TGTGGTTTATACCATATGTA+TGG | 0.503323 | 4.2:+2965588 | MS.gene06155:CDS |
| CCAATCCATGCACAAGCAGC+AGG | 0.508389 | 4.2:+2966875 | MS.gene06155:CDS |
| GATTGCTGAAGGAGCAGGAC+AGG | 0.511673 | 4.2:+2966833 | MS.gene06155:CDS |
| GCGGTTCATGGAGCAATGGC+AGG | 0.512733 | 4.2:+2967713 | MS.gene06155:CDS |
| ATGGATATCCCATAAGTTGA+AGG | 0.517124 | 4.2:+2966935 | MS.gene06155:CDS |
| TTTCAGGTTTATATAATAGG+AGG | 0.517903 | 4.2:+2966053 | MS.gene06155:intron |
| ACGTTGTCAGAGGCATTGCT+TGG | 0.518024 | 4.2:-2967665 | None:intergenic |
| ATTGTGATTGCTGAAGGAGC+AGG | 0.519189 | 4.2:+2966828 | MS.gene06155:CDS |
| CACCCTTGCGAATCGGGATG+TGG | 0.541983 | 4.2:+2966707 | MS.gene06155:CDS |
| GTTTATATAATAGGAGGAGA+TGG | 0.543174 | 4.2:+2966059 | MS.gene06155:CDS |
| ACATACTAACTCCCTAATAA+CGG | 0.547174 | 4.2:-2965568 | None:intergenic |
| AGGAGGAGATGGAACTCAGA+GGG | 0.547255 | 4.2:+2966070 | MS.gene06155:CDS |
| AAAATTGTTAGAGGCTCCGC+TGG | 0.554480 | 4.2:+2964206 | MS.gene06155:CDS |
| AATTAGAAACCGTGGTCTCA+AGG | 0.554898 | 4.2:+2966216 | MS.gene06155:CDS |
| CTAATAACGGTGTTGAGACC+AGG | 0.555952 | 4.2:-2965555 | None:intergenic |
| ACATGTGGAGGTTTATGTCC+TGG | 0.556306 | 4.2:+2965537 | MS.gene06155:CDS |
| TAGGCAGGATTGTCTTGCAA+TGG | 0.561212 | 4.2:-2964462 | None:intergenic |
| CACATCCCGATTCGCAAGGG+TGG | 0.563937 | 4.2:-2966706 | None:intergenic |
| CTTTGACACAGCTGTTGAGG+AGG | 0.569026 | 4.2:+2966426 | MS.gene06155:CDS |
| GCCAACAAAGATAGTCCAAG+AGG | 0.569223 | 4.2:+2965362 | MS.gene06155:CDS |
| TTTACGAGTGGGCTTGTGCA+TGG | 0.573351 | 4.2:+2967746 | MS.gene06155:CDS |
| ATAGGTGTTGTCAAGTTGAT+GGG | 0.573864 | 4.2:+2966502 | MS.gene06155:CDS |
| GGAATGTAATCGGTTAAATG+AGG | 0.576489 | 4.2:-2964248 | None:intergenic |
| CAGGAAACTTACCACTGTAT+CGG | 0.579399 | 4.2:-2966525 | None:intergenic |
| AGTCCACATCCCGATTCGCA+AGG | 0.579766 | 4.2:-2966710 | None:intergenic |
| TACTTGACAACTGAATAGGC+AGG | 0.587228 | 4.2:-2964477 | None:intergenic |
| GATGTGAAGGGAGGATACAA+GGG | 0.587856 | 4.2:+2965803 | MS.gene06155:intron |
| GAAGCTGAAAGTGTTGAAAA+CGG | 0.594450 | 4.2:+2966478 | MS.gene06155:CDS |
| TACGCTTCTTGCTCAAAGTG+CGG | 0.603097 | 4.2:+2967694 | MS.gene06155:CDS |
| GCTGCCATTGTGACATGTGG+AGG | 0.605863 | 4.2:+2965525 | MS.gene06155:CDS |
| AACAGCTGTGTCAAAGCCGA+AGG | 0.608023 | 4.2:-2966419 | None:intergenic |
| GTCCACCTCGCGATGAACCA+AGG | 0.608972 | 4.2:-2965898 | None:intergenic |
| TTAAATGAGGAACATCTTCG+AGG | 0.616676 | 4.2:-2964235 | None:intergenic |
| ATGGTTATTGTGATTGCTGA+AGG | 0.618393 | 4.2:+2966822 | MS.gene06155:CDS |
| CAACTGCAACCTTGAGACCA+CGG | 0.620649 | 4.2:-2966225 | None:intergenic |
| ACAGCTCTAATCATATAGGT+AGG | 0.620671 | 4.2:-2967641 | None:intergenic |
| ACTATCCTTGGTTCATCGCG+AGG | 0.625631 | 4.2:+2965893 | MS.gene06155:CDS |
| GTCCACATCCCGATTCGCAA+GGG | 0.625633 | 4.2:-2966709 | None:intergenic |
| GTTGACAGTATTCAAGATAG+GGG | 0.630179 | 4.2:+2965938 | MS.gene06155:CDS |
| AAGTGCGGTTCATGGAGCAA+TGG | 0.631546 | 4.2:+2967709 | MS.gene06155:CDS |
| GCTAAAAGAAAATGGCCACA+TGG | 0.633855 | 4.2:+2966803 | MS.gene06155:CDS |
| AAGTTGATGGGCCGATACAG+TGG | 0.643563 | 4.2:+2966514 | MS.gene06155:CDS |
| CCAACAAAGATAGTCCAAGA+GGG | 0.648453 | 4.2:+2965363 | MS.gene06155:CDS |
| CGTACAGTACACGTTGTCAG+AGG | 0.651345 | 4.2:-2967675 | None:intergenic |
| TAAACCTCCACATGTCACAA+TGG | 0.653142 | 4.2:-2965529 | None:intergenic |
| CAGGCTGCCATTGTGACATG+TGG | 0.653226 | 4.2:+2965522 | MS.gene06155:CDS |
| ATCCTTGGTTCATCGCGAGG+TGG | 0.657168 | 4.2:+2965896 | MS.gene06155:CDS |
| TCATAGGAAATTAGAAACCG+TGG | 0.660254 | 4.2:+2966208 | MS.gene06155:intron |
| GTAAATGATATACATAAGCG+TGG | 0.691593 | 4.2:+2965866 | MS.gene06155:CDS |
| ATCTTCGAGGATATAACCAG+CGG | 0.701644 | 4.2:-2964222 | None:intergenic |
| GGAGGAGATGGAACTCAGAG+GGG | 0.709597 | 4.2:+2966071 | MS.gene06155:CDS |
| TAGGAGGAGATGGAACTCAG+AGG | 0.715955 | 4.2:+2966069 | MS.gene06155:CDS |
| CAGCAATCACAATAACCATG+TGG | 0.741689 | 4.2:-2966818 | None:intergenic |
| AATGATATACATAAGCGTGG+CGG | 0.746132 | 4.2:+2965869 | MS.gene06155:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTATGAATAAAAATAAATT+AGG | - | chr4.2:2964536-2964555 | None:intergenic | 10.0% |
| !!! | AATTACTATTTTTAATGATT+AGG | - | chr4.2:2964754-2964773 | None:intergenic | 10.0% |
| !!! | GTTATATTTTCTTTTATTTT+GGG | + | chr4.2:2964637-2964656 | MS.gene06155:intron | 10.0% |
| !!! | TTATATTTTCTTTTATTTTG+GGG | + | chr4.2:2964638-2964657 | MS.gene06155:intron | 10.0% |
| !!! | GGTTATATTTTCTTTTATTT+TGG | + | chr4.2:2964636-2964655 | MS.gene06155:intron | 15.0% |
| !! | AAAAAACAATTTATCCTCAT+AGG | + | chr4.2:2966192-2966211 | MS.gene06155:intron | 20.0% |
| !! | AATAATCTGTTAAACAAAGA+GGG | - | chr4.2:2965342-2965361 | None:intergenic | 20.0% |
| !! | CAGTATAAAATTGTATATTC+AGG | + | chr4.2:2965476-2965495 | MS.gene06155:intron | 20.0% |
| !! | CATTTAAAAACTCATCAAAA+TGG | - | chr4.2:2967178-2967197 | None:intergenic | 20.0% |
| !! | GTAAGAATTACTAACATTAT+GGG | - | chr4.2:2967354-2967373 | None:intergenic | 20.0% |
| !! | GTTAGTAATTCTTACAAATA+AGG | + | chr4.2:2967359-2967378 | MS.gene06155:intron | 20.0% |
| !! | TAAAGAAAGCAAATAGAATA+TGG | + | chr4.2:2966621-2966640 | MS.gene06155:intron | 20.0% |
| !! | TGTAAGAATTACTAACATTA+TGG | - | chr4.2:2967355-2967374 | None:intergenic | 20.0% |
| !!! | AAAGAAAATATAACCTTTTG+AGG | - | chr4.2:2964631-2964650 | None:intergenic | 20.0% |
| !!! | CAATTTCAGGTTTATATAAT+AGG | + | chr4.2:2966050-2966069 | MS.gene06155:intron | 20.0% |
| !!! | TTTATTTTGGGGTAAATTTT+CGG | + | chr4.2:2964649-2964668 | MS.gene06155:intron | 20.0% |
| !!! | TTTTGAGGTATTAAACTTTT+AGG | + | chr4.2:2966106-2966125 | MS.gene06155:intron | 20.0% |
| ! | ACCATGTTATATACTAATGA+AGG | - | chr4.2:2964717-2964736 | None:intergenic | 25.0% |
| ! | ACGCTTATGTATATCATTTA+CGG | - | chr4.2:2965867-2965886 | None:intergenic | 25.0% |
| ! | AGAAATTTCTGCATAAACAT+GGG | - | chr4.2:2964846-2964865 | None:intergenic | 25.0% |
| ! | ATATAAATTGGGTCAATTTC+AGG | + | chr4.2:2966037-2966056 | MS.gene06155:intron | 25.0% |
| ! | ATGTTATATACTAATGAAGG+AGG | - | chr4.2:2964714-2964733 | None:intergenic | 25.0% |
| ! | CAATAATCTGTTAAACAAAG+AGG | - | chr4.2:2965343-2965362 | None:intergenic | 25.0% |
| ! | CTATTTGCTTTCTTTAAATG+AGG | - | chr4.2:2966617-2966636 | None:intergenic | 25.0% |
| ! | GGTATAACTCTCAAATATAT+AGG | + | chr4.2:2967521-2967540 | MS.gene06155:CDS | 25.0% |
| ! | TAAACAGATAAAATCACACA+TGG | - | chr4.2:2965430-2965449 | None:intergenic | 25.0% |
| ! | TAACTCTCAAATATATAGGT+TGG | + | chr4.2:2967525-2967544 | MS.gene06155:intron | 25.0% |
| ! | TAGAAATTTCTGCATAAACA+TGG | - | chr4.2:2964847-2964866 | None:intergenic | 25.0% |
| ! | TATCTGTTCTGATAAATAGA+AGG | - | chr4.2:2965984-2966003 | None:intergenic | 25.0% |
| ! | TCCTTCATTAGTATATAACA+TGG | + | chr4.2:2964713-2964732 | MS.gene06155:intron | 25.0% |
| ! | TTAAAATGTATTCATGAACG+TGG | + | chr4.2:2964996-2965015 | MS.gene06155:intron | 25.0% |
| ! | TTATATAAGATCAGCGTAAT+TGG | - | chr4.2:2964946-2964965 | None:intergenic | 25.0% |
| !! | AATGATACATAAGATTAGCT+AGG | - | chr4.2:2964354-2964373 | None:intergenic | 25.0% |
| !! | ATGTGTGATTTTATCTGTTT+AGG | + | chr4.2:2965429-2965448 | MS.gene06155:intron | 25.0% |
| !! | CTTTAGTACAACTTTTTGTA+AGG | - | chr4.2:2967236-2967255 | None:intergenic | 25.0% |
| !! | TGTATATCATTTACGGTTTT+CGG | - | chr4.2:2965860-2965879 | None:intergenic | 25.0% |
| !! | TTATGTTGTAAGATCTTTTG+AGG | - | chr4.2:2965206-2965225 | None:intergenic | 25.0% |
| !! | TTTTAAATCAGATGAAGTTC+AGG | + | chr4.2:2965503-2965522 | MS.gene06155:CDS | 25.0% |
| !!! | ACAATTTTAGGCTTTGAATT+TGG | - | chr4.2:2964194-2964213 | None:intergenic | 25.0% |
| !!! | GTGTTCCTTTTAATTTACTA+GGG | - | chr4.2:2966595-2966614 | None:intergenic | 25.0% |
| !!! | TGTTCCTTTTAATTTACTAG+GGG | - | chr4.2:2966594-2966613 | None:intergenic | 25.0% |
| !!! | TTTCAGGTTTATATAATAGG+AGG | + | chr4.2:2966053-2966072 | MS.gene06155:intron | 25.0% |
| AAACAAAACATGATATTGCC+AGG | + | chr4.2:2964789-2964808 | MS.gene06155:intron | 30.0% | |
| AAATAATCCTGCTACATCAA+AGG | - | chr4.2:2967482-2967501 | None:intergenic | 30.0% | |
| AAATCAACACCTTCAACTTA+TGG | - | chr4.2:2966947-2966966 | None:intergenic | 30.0% | |
| AACAAAACATGATATTGCCA+GGG | + | chr4.2:2964790-2964809 | MS.gene06155:intron | 30.0% | |
| AACAAACTTCTTCAAGATGT+TGG | + | chr4.2:2966909-2966928 | MS.gene06155:CDS | 30.0% | |
| AACTTACTTGACAACTGAAT+AGG | - | chr4.2:2964484-2964503 | None:intergenic | 30.0% | |
| AATACTGTCAACTATCTTAG+TGG | - | chr4.2:2965930-2965949 | None:intergenic | 30.0% | |
| AATCAACACCTTCAACTTAT+GGG | - | chr4.2:2966946-2966965 | None:intergenic | 30.0% | |
| ACATACTAACTCCCTAATAA+CGG | - | chr4.2:2965571-2965590 | None:intergenic | 30.0% | |
| AGTTAGTTATGCACAAAGTA+CGG | - | chr4.2:2965070-2965089 | None:intergenic | 30.0% | |
| AGTTGACAGTATTCAAGATA+GGG | + | chr4.2:2965937-2965956 | MS.gene06155:CDS | 30.0% | |
| ATCACTTTATAAGTAGCTTG+TGG | + | chr4.2:2967294-2967313 | MS.gene06155:intron | 30.0% | |
| ATGGACATGAATGTAATGTA+AGG | - | chr4.2:2967072-2967091 | None:intergenic | 30.0% | |
| ATTGACCCAATTTATATGTC+TGG | - | chr4.2:2966034-2966053 | None:intergenic | 30.0% | |
| CAATCCCCTAGTAAATTAAA+AGG | + | chr4.2:2966587-2966606 | MS.gene06155:intron | 30.0% | |
| CAGCGTAATTGGTATAAATT+TGG | - | chr4.2:2964935-2964954 | None:intergenic | 30.0% | |
| CATTACATTCATGTCCATTT+AGG | + | chr4.2:2967074-2967093 | MS.gene06155:intron | 30.0% | |
| CTTACAACATAACTTTGTTG+AGG | + | chr4.2:2965214-2965233 | MS.gene06155:intron | 30.0% | |
| GCATAACTAACTTCCATAAA+AGG | + | chr4.2:2965078-2965097 | MS.gene06155:intron | 30.0% | |
| GTAAATGATATACATAAGCG+TGG | + | chr4.2:2965866-2965885 | MS.gene06155:CDS | 30.0% | |
| GTTTATATAATAGGAGGAGA+TGG | + | chr4.2:2966059-2966078 | MS.gene06155:CDS | 30.0% | |
| GTTTGGATTTCATACAATCA+TGG | + | chr4.2:2965673-2965692 | MS.gene06155:intron | 30.0% | |
| TAGTTGACAGTATTCAAGAT+AGG | + | chr4.2:2965936-2965955 | MS.gene06155:CDS | 30.0% | |
| TATCACATTGTATACTATGC+AGG | + | chr4.2:2966005-2966024 | MS.gene06155:intron | 30.0% | |
| TCAAAGCCTAAAATTGTTAG+AGG | + | chr4.2:2964197-2964216 | MS.gene06155:CDS | 30.0% | |
| TGTGGTTTATACCATATGTA+TGG | + | chr4.2:2965588-2965607 | MS.gene06155:CDS | 30.0% | |
| TTGTATGAAATCCAAACAAG+AGG | - | chr4.2:2965670-2965689 | None:intergenic | 30.0% | |
| TTTCATACAATCATGGACAT+AGG | + | chr4.2:2965680-2965699 | MS.gene06155:intron | 30.0% | |
| TTTGCTAAACAGAAGACAAT+GGG | + | chr4.2:2967500-2967519 | MS.gene06155:CDS | 30.0% | |
| ! | AATTAACAGAGCCTAAGTTT+TGG | + | chr4.2:2966652-2966671 | MS.gene06155:intron | 30.0% |
| ! | ATGTCGTTATCTATCGTTTT+TGG | - | chr4.2:2966259-2966278 | None:intergenic | 30.0% |
| ! | ATTAACAGAGCCTAAGTTTT+GGG | + | chr4.2:2966653-2966672 | MS.gene06155:intron | 30.0% |
| ! | ATTCATTTTCTCCTCTTGTT+TGG | + | chr4.2:2965656-2965675 | MS.gene06155:intron | 30.0% |
| ! | TACATGTTTTCTGTTGTCTT+TGG | + | chr4.2:2966375-2966394 | MS.gene06155:intron | 30.0% |
| ! | TGGTAAATCTGGAATGTAAT+CGG | - | chr4.2:2964261-2964280 | None:intergenic | 30.0% |
| ! | TTTTGCTAAACAGAAGACAA+TGG | + | chr4.2:2967499-2967518 | MS.gene06155:CDS | 30.0% |
| ! | TTTTTAACCTTTGATGTAGC+AGG | + | chr4.2:2967472-2967491 | MS.gene06155:intron | 30.0% |
| ! | TTTTTGAATATACGGAGAGA+AGG | + | chr4.2:2966781-2966800 | MS.gene06155:CDS | 30.0% |
| !! | ACATTTTAAAGACCACATTG+AGG | - | chr4.2:2966995-2967014 | None:intergenic | 30.0% |
| !! | CTGTCGATTTGAAAAAAGAA+GGG | - | chr4.2:2967619-2967638 | None:intergenic | 30.0% |
| !! | TCTGTCGATTTGAAAAAAGA+AGG | - | chr4.2:2967620-2967639 | None:intergenic | 30.0% |
| !! | TGTCGTTATCTATCGTTTTT+GGG | - | chr4.2:2966258-2966277 | None:intergenic | 30.0% |
| !!! | AATTTGGTTTTTCACAGCAT+AGG | - | chr4.2:2964919-2964938 | None:intergenic | 30.0% |
| !!! | AGCATAGGTGTTGTTTTAAT+TGG | - | chr4.2:2964904-2964923 | None:intergenic | 30.0% |
| !!! | GGTGTTCCTTTTAATTTACT+AGG | - | chr4.2:2966596-2966615 | None:intergenic | 30.0% |
| !!! | TTTTTTTATTCTGTTTGCGC+CGG | + | chr4.2:2966966-2966985 | MS.gene06155:intron | 30.0% |
| AAAGGTTCTGTTAAAGTTGC+TGG | + | chr4.2:2965277-2965296 | MS.gene06155:intron | 35.0% | |
| AACGATAGATAACGACATTC+CGG | + | chr4.2:2966261-2966280 | MS.gene06155:CDS | 35.0% | |
| AATGATATACATAAGCGTGG+CGG | + | chr4.2:2965869-2965888 | MS.gene06155:CDS | 35.0% | |
| ACCTTTCTATCAGAAAATCG+TGG | - | chr4.2:2965263-2965282 | None:intergenic | 35.0% | |
| ACGGTTTCTAATTTCCTATG+AGG | - | chr4.2:2966209-2966228 | None:intergenic | 35.0% | |
| AGGACACCAGACATATAAAT+TGG | + | chr4.2:2966025-2966044 | MS.gene06155:intron | 35.0% | |
| ATGGTTATTGTGATTGCTGA+AGG | + | chr4.2:2966822-2966841 | MS.gene06155:CDS | 35.0% | |
| ATGTTCTGTTGTGATGTGAA+GGG | + | chr4.2:2965791-2965810 | MS.gene06155:intron | 35.0% | |
| CTTCCATAAAAGGAACCTAT+CGG | + | chr4.2:2965088-2965107 | MS.gene06155:intron | 35.0% | |
| GAGAGAAGGCTAAAAGAAAA+TGG | + | chr4.2:2966795-2966814 | MS.gene06155:CDS | 35.0% | |
| GATGAACTAAACACATTAGC+CGG | - | chr4.2:2967109-2967128 | None:intergenic | 35.0% | |
| GGAATGTAATCGGTTAAATG+AGG | - | chr4.2:2964251-2964270 | None:intergenic | 35.0% | |
| GGACACCAGACATATAAATT+GGG | + | chr4.2:2966026-2966045 | MS.gene06155:intron | 35.0% | |
| GGGGAGGTAAAAATAATTAC+CGG | - | chr4.2:2966283-2966302 | None:intergenic | 35.0% | |
| GTTATTAGGGAGTTAGTATG+TGG | + | chr4.2:2965570-2965589 | MS.gene06155:CDS | 35.0% | |
| GTTGACAGTATTCAAGATAG+GGG | + | chr4.2:2965938-2965957 | MS.gene06155:CDS | 35.0% | |
| TAGGTTATTGACAAGTCCTT+CGG | + | chr4.2:2966403-2966422 | MS.gene06155:intron | 35.0% | |
| TCAAACATGCAAACTAGCAT+AGG | - | chr4.2:2967146-2967165 | None:intergenic | 35.0% | |
| TCATAGGAAATTAGAAACCG+TGG | + | chr4.2:2966208-2966227 | MS.gene06155:intron | 35.0% | |
| TCCATTTAGGCTATGATTAC+CGG | + | chr4.2:2967087-2967106 | MS.gene06155:intron | 35.0% | |
| TTAAATGAGGAACATCTTCG+AGG | - | chr4.2:2964238-2964257 | None:intergenic | 35.0% | |
| TTCTTCAAGATGTTGGACTA+TGG | + | chr4.2:2966916-2966935 | MS.gene06155:CDS | 35.0% | |
| ! | ACAGCTCTAATCATATAGGT+AGG | - | chr4.2:2967644-2967663 | None:intergenic | 35.0% |
| ! | ACTTTATAAGTAGCTTGTGG+TGG | + | chr4.2:2967297-2967316 | MS.gene06155:intron | 35.0% |
| ! | AGGCGGTCTTTTTGAATATA+CGG | + | chr4.2:2966773-2966792 | MS.gene06155:CDS | 35.0% |
| ! | ATGGATATCCCATAAGTTGA+AGG | + | chr4.2:2966935-2966954 | MS.gene06155:CDS | 35.0% |
| ! | GAAGCATTTCTATCTGAACA+TGG | + | chr4.2:2967255-2967274 | MS.gene06155:intron | 35.0% |
| ! | TCCACGATTTTCTGATAGAA+AGG | + | chr4.2:2965259-2965278 | MS.gene06155:intron | 35.0% |
| ! | TCTGTTGTCTTTGGCTTAAT+AGG | + | chr4.2:2966384-2966403 | MS.gene06155:intron | 35.0% |
| ! | TGGAACAGCTCTAATCATAT+AGG | - | chr4.2:2967648-2967667 | None:intergenic | 35.0% |
| !! | AATAGGTGTTGTCAAGTTGA+TGG | + | chr4.2:2966501-2966520 | MS.gene06155:CDS | 35.0% |
| !! | AGAAGAAACAGGTTTTAACC+GGG | - | chr4.2:2964328-2964347 | None:intergenic | 35.0% |
| !! | ATAGGTGTTGTCAAGTTGAT+GGG | + | chr4.2:2966502-2966521 | MS.gene06155:CDS | 35.0% |
| !! | GAAAGTGTTGAAAACGGAAT+AGG | + | chr4.2:2966484-2966503 | MS.gene06155:CDS | 35.0% |
| !! | GAAGCTGAAAGTGTTGAAAA+CGG | + | chr4.2:2966478-2966497 | MS.gene06155:CDS | 35.0% |
| !! | GAGAAGAAACAGGTTTTAAC+CGG | - | chr4.2:2964329-2964348 | None:intergenic | 35.0% |
| !! | TATGGCGTCAAGAAAGTATT+AGG | + | chr4.2:2965606-2965625 | MS.gene06155:CDS | 35.0% |
| !! | TTGAGTTGGAATCCACAAAT+AGG | - | chr4.2:2966310-2966329 | None:intergenic | 35.0% |
| AAAGACCACATTGAGGTAAC+CGG | - | chr4.2:2966988-2967007 | None:intergenic | 40.0% | |
| AATTAGAAACCGTGGTCTCA+AGG | + | chr4.2:2966216-2966235 | MS.gene06155:CDS | 40.0% | |
| AGATACGTCAGCTCAGTTAA+TGG | - | chr4.2:2964816-2964835 | None:intergenic | 40.0% | |
| ATCTTCGAGGATATAACCAG+CGG | - | chr4.2:2964225-2964244 | None:intergenic | 40.0% | |
| CAGCAATCACAATAACCATG+TGG | - | chr4.2:2966821-2966840 | None:intergenic | 40.0% | |
| CAGGAAACTTACCACTGTAT+CGG | - | chr4.2:2966528-2966547 | None:intergenic | 40.0% | |
| CAGGTTTGAACTGTTTGAGT+TGG | - | chr4.2:2966324-2966343 | None:intergenic | 40.0% | |
| CCAACAAAGATAGTCCAAGA+GGG | + | chr4.2:2965363-2965382 | MS.gene06155:CDS | 40.0% | |
| CTTTCTTGACGCCATACATA+TGG | - | chr4.2:2965602-2965621 | None:intergenic | 40.0% | |
| GAATCCACAAATAGGAAGAG+GGG | - | chr4.2:2966302-2966321 | None:intergenic | 40.0% | |
| GATATGCACGAAATATTGCC+TGG | - | chr4.2:2964596-2964615 | None:intergenic | 40.0% | |
| GATGTTCTGTTGTGATGTGA+AGG | + | chr4.2:2965790-2965809 | MS.gene06155:intron | 40.0% | |
| GCTAAAAGAAAATGGCCACA+TGG | + | chr4.2:2966803-2966822 | MS.gene06155:CDS | 40.0% | |
| GGAATCCACAAATAGGAAGA+GGG | - | chr4.2:2966303-2966322 | None:intergenic | 40.0% | |
| GTATATTCAAAAAGACCGCC+TGG | - | chr4.2:2966774-2966793 | None:intergenic | 40.0% | |
| GTCGTAAAATAAGCACACGA+AGG | - | chr4.2:2965457-2965476 | None:intergenic | 40.0% | |
| TAAACCTCCACATGTCACAA+TGG | - | chr4.2:2965532-2965551 | None:intergenic | 40.0% | |
| TACAAGTCAACCATGCTAAC+TGG | - | chr4.2:2966357-2966376 | None:intergenic | 40.0% | |
| TACTTGACAACTGAATAGGC+AGG | - | chr4.2:2964480-2964499 | None:intergenic | 40.0% | |
| TAGCTAGGTAGAGAAGAAAC+AGG | - | chr4.2:2964339-2964358 | None:intergenic | 40.0% | |
| TCAAGATAGGGGAATCAATC+AGG | + | chr4.2:2965949-2965968 | MS.gene06155:CDS | 40.0% | |
| TCTGCATAAACATGGGATTG+TGG | - | chr4.2:2964839-2964858 | None:intergenic | 40.0% | |
| TGGAATCCACAAATAGGAAG+AGG | - | chr4.2:2966304-2966323 | None:intergenic | 40.0% | |
| TGGTCTCAACACCGTTATTA+GGG | + | chr4.2:2965557-2965576 | MS.gene06155:CDS | 40.0% | |
| TTTCCTACTACCAGTTAGCA+TGG | + | chr4.2:2966344-2966363 | MS.gene06155:intron | 40.0% | |
| ! | AAAAGGAACCTATCGGCTAT+CGG | + | chr4.2:2965095-2965114 | MS.gene06155:intron | 40.0% |
| ! | GACAATGCAAGTTGAAACAG+CGG | + | chr4.2:2965236-2965255 | MS.gene06155:intron | 40.0% |
| ! | GGGCGCTTATAGAATTTTTG+AGG | + | chr4.2:2966091-2966110 | MS.gene06155:CDS | 40.0% |
| ! | GTCCAAGAGGGATACATTTT+CGG | + | chr4.2:2965375-2965394 | MS.gene06155:CDS | 40.0% |
| ! | TAGCCGATAGGTTCCTTTTA+TGG | - | chr4.2:2965094-2965113 | None:intergenic | 40.0% |
| ! | TGTGGACTGTTGCTTAATTC+CGG | + | chr4.2:2966725-2966744 | MS.gene06155:CDS | 40.0% |
| ! | TTGTGGTGGAAACATGATCA+CGG | + | chr4.2:2967311-2967330 | MS.gene06155:intron | 40.0% |
| AAAATTGTTAGAGGCTCCGC+TGG | + | chr4.2:2964206-2964225 | MS.gene06155:CDS | 45.0% | |
| ACATGCAAACTAGCATAGGC+AGG | - | chr4.2:2967142-2967161 | None:intergenic | 45.0% | |
| ACATGTGGAGGTTTATGTCC+TGG | + | chr4.2:2965537-2965556 | MS.gene06155:CDS | 45.0% | |
| ACGAAATATTGCCTGGCAAG+AGG | - | chr4.2:2964589-2964608 | None:intergenic | 45.0% | |
| ATGCAAACTAGCATAGGCAG+GGG | - | chr4.2:2967140-2967159 | None:intergenic | 45.0% | |
| ATTGTGATTGCTGAAGGAGC+AGG | + | chr4.2:2966828-2966847 | MS.gene06155:CDS | 45.0% | |
| CAACCATGCTAACTGGTAGT+AGG | - | chr4.2:2966350-2966369 | None:intergenic | 45.0% | |
| CAACGTTCTTCGGCTGATAA+AGG | + | chr4.2:2965024-2965043 | MS.gene06155:intron | 45.0% | |
| CATGCAAACTAGCATAGGCA+GGG | - | chr4.2:2967141-2967160 | None:intergenic | 45.0% | |
| CCCTCTTGGACTATCTTTGT+TGG | - | chr4.2:2965366-2965385 | None:intergenic | 45.0% | |
| CCTGGACCTTCAAGGAAAAA+GGG | - | chr4.2:2966756-2966775 | None:intergenic | 45.0% | |
| CGAAATATTGCCTGGCAAGA+GGG | - | chr4.2:2964588-2964607 | None:intergenic | 45.0% | |
| CGATGACAGTGTTCCTCAAA+AGG | + | chr4.2:2964615-2964634 | MS.gene06155:CDS | 45.0% | |
| CTGGTCTCAACACCGTTATT+AGG | + | chr4.2:2965556-2965575 | MS.gene06155:CDS | 45.0% | |
| CTTTATCAGCCGAAGAACGT+TGG | - | chr4.2:2965026-2965045 | None:intergenic | 45.0% | |
| GAATTAGAACGACGACGTAC+TGG | - | chr4.2:2964281-2964300 | None:intergenic | 45.0% | |
| GATGTGAAGGGAGGATACAA+GGG | + | chr4.2:2965803-2965822 | MS.gene06155:intron | 45.0% | |
| GCCAACAAAGATAGTCCAAG+AGG | + | chr4.2:2965362-2965381 | MS.gene06155:CDS | 45.0% | |
| GCCGGTAATCATAGCCTAAA+TGG | - | chr4.2:2967091-2967110 | None:intergenic | 45.0% | |
| GCTAACTGGTAGTAGGAAAC+AGG | - | chr4.2:2966343-2966362 | None:intergenic | 45.0% | |
| TACGCTTCTTGCTCAAAGTG+CGG | + | chr4.2:2967694-2967713 | MS.gene06155:CDS | 45.0% | |
| TAGGCAGGATTGTCTTGCAA+TGG | - | chr4.2:2964465-2964484 | None:intergenic | 45.0% | |
| TGATGTGAAGGGAGGATACA+AGG | + | chr4.2:2965802-2965821 | MS.gene06155:intron | 45.0% | |
| TTAATTTCCTCCCTCTTGCC+AGG | + | chr4.2:2964575-2964594 | MS.gene06155:intron | 45.0% | |
| TTCTGTTGTGATGTGAAGGG+AGG | + | chr4.2:2965794-2965813 | MS.gene06155:intron | 45.0% | |
| ! | CTAATAACGGTGTTGAGACC+AGG | - | chr4.2:2965558-2965577 | None:intergenic | 45.0% |
| ! | CTATGCTTTTCTCTTACGCC+CGG | + | chr4.2:2964307-2964326 | MS.gene06155:CDS | 45.0% |
| ! | GAGACACCCTTTTTCCTTGA+AGG | + | chr4.2:2966747-2966766 | MS.gene06155:CDS | 45.0% |
| ! | GCGGAGCCTCTAACAATTTT+AGG | - | chr4.2:2964206-2964225 | None:intergenic | 45.0% |
| ! | TGATCACGGTTGATGTTGAC+AGG | + | chr4.2:2967325-2967344 | MS.gene06155:intron | 45.0% |
| ! | TTTTTCCTTGAAGGTCCAGG+CGG | + | chr4.2:2966756-2966775 | MS.gene06155:CDS | 45.0% |
| !! | TCAAGGAAAAAGGGTGTCTC+CGG | - | chr4.2:2966747-2966766 | None:intergenic | 45.0% |
| !! | TGGAGGCATTACAAGCAATC+AGG | - | chr4.2:2966547-2966566 | None:intergenic | 45.0% |
| !!! | GCTACACTGGTTTTACGAGT+GGG | + | chr4.2:2967735-2967754 | MS.gene06155:CDS | 45.0% |
| AACAGCTGTGTCAAAGCCGA+AGG | - | chr4.2:2966422-2966441 | None:intergenic | 50.0% | |
| AAGTGCGGTTCATGGAGCAA+TGG | + | chr4.2:2967709-2967728 | MS.gene06155:CDS | 50.0% | |
| AATATTGCCTGGCAAGAGGG+AGG | - | chr4.2:2964585-2964604 | None:intergenic | 50.0% | |
| ACCTCCCCTCTTCCTATTTG+TGG | + | chr4.2:2966295-2966314 | MS.gene06155:intron | 50.0% | |
| ACTATCCTTGGTTCATCGCG+AGG | + | chr4.2:2965893-2965912 | MS.gene06155:CDS | 50.0% | |
| AGGAGGAGATGGAACTCAGA+GGG | + | chr4.2:2966070-2966089 | MS.gene06155:CDS | 50.0% | |
| CAACTGCAACCTTGAGACCA+CGG | - | chr4.2:2966228-2966247 | None:intergenic | 50.0% | |
| CGCCGAAAATGTATCCCTCT+TGG | - | chr4.2:2965380-2965399 | None:intergenic | 50.0% | |
| CGTACAGTACACGTTGTCAG+AGG | - | chr4.2:2967678-2967697 | None:intergenic | 50.0% | |
| CGTGGCAAACCAACGTTCTT+CGG | + | chr4.2:2965014-2965033 | MS.gene06155:intron | 50.0% | |
| CTTGCTCAAAGTGCGGTTCA+TGG | + | chr4.2:2967701-2967720 | MS.gene06155:CDS | 50.0% | |
| CTTTGACACAGCTGTTGAGG+AGG | + | chr4.2:2966426-2966445 | MS.gene06155:CDS | 50.0% | |
| GCCTGGACCTTCAAGGAAAA+AGG | - | chr4.2:2966757-2966776 | None:intergenic | 50.0% | |
| GGTCTCAAGGTTGCAGTTGT+AGG | + | chr4.2:2966229-2966248 | MS.gene06155:CDS | 50.0% | |
| TAGGAGGAGATGGAACTCAG+AGG | + | chr4.2:2966069-2966088 | MS.gene06155:CDS | 50.0% | |
| TCCACAAATAGGAAGAGGGG+AGG | - | chr4.2:2966299-2966318 | None:intergenic | 50.0% | |
| TGTATGCCACCCTTGCGAAT+CGG | + | chr4.2:2966700-2966719 | MS.gene06155:CDS | 50.0% | |
| ! | CCCTTTTTCCTTGAAGGTCC+AGG | + | chr4.2:2966753-2966772 | MS.gene06155:CDS | 50.0% |
| ! | CGACGACGTACTGGTAAATC+TGG | - | chr4.2:2964272-2964291 | None:intergenic | 50.0% |
| ! | TGGAACCACACCTTTTGACG+AGG | - | chr4.2:2965410-2965429 | None:intergenic | 50.0% |
| ! | TTTACGAGTGGGCTTGTGCA+TGG | + | chr4.2:2967746-2967765 | MS.gene06155:CDS | 50.0% |
| !! | AAGTTGATGGGCCGATACAG+TGG | + | chr4.2:2966514-2966533 | MS.gene06155:CDS | 50.0% |
| !! | ACGTTGTCAGAGGCATTGCT+TGG | - | chr4.2:2967668-2967687 | None:intergenic | 50.0% |
| !!! | GGCTACACTGGTTTTACGAG+TGG | + | chr4.2:2967734-2967753 | MS.gene06155:CDS | 50.0% |
| AAAGACCGCCTGGACCTTCA+AGG | - | chr4.2:2966764-2966783 | None:intergenic | 55.0% | |
| ATCCTTGGTTCATCGCGAGG+TGG | + | chr4.2:2965896-2965915 | MS.gene06155:CDS | 55.0% | |
| CACAAGCAGCAGGATGCTTC+TGG | + | chr4.2:2966885-2966904 | MS.gene06155:CDS | 55.0% | |
| CAGGCTGCCATTGTGACATG+TGG | + | chr4.2:2965522-2965541 | MS.gene06155:CDS | 55.0% | |
| CCAATCCATGCACAAGCAGC+AGG | + | chr4.2:2966875-2966894 | MS.gene06155:CDS | 55.0% | |
| CTAGCATAGGCAGGGGAAGT+AGG | - | chr4.2:2967133-2967152 | None:intergenic | 55.0% | |
| GATTGCTGAAGGAGCAGGAC+AGG | + | chr4.2:2966833-2966852 | MS.gene06155:CDS | 55.0% | |
| GCACCATGCGCCCAAAACTT+AGG | - | chr4.2:2966666-2966685 | None:intergenic | 55.0% | |
| GCTGCCATTGTGACATGTGG+AGG | + | chr4.2:2965525-2965544 | MS.gene06155:CDS | 55.0% | |
| GGAGGAGATGGAACTCAGAG+GGG | + | chr4.2:2966071-2966090 | MS.gene06155:CDS | 55.0% | |
| GTATGCCACCCTTGCGAATC+GGG | + | chr4.2:2966701-2966720 | MS.gene06155:CDS | 55.0% | |
| GTCAGCTCAGTTAATGGCCC+TGG | - | chr4.2:2964810-2964829 | None:intergenic | 55.0% | |
| GTTTCCGTCCGATAGCCGAT+AGG | - | chr4.2:2965106-2965125 | None:intergenic | 55.0% | |
| TTGAAGCACGCGAAGCTGAC+AGG | - | chr4.2:2966570-2966589 | None:intergenic | 55.0% | |
| ! | AAGCGTGGCGGAACTATCCT+TGG | + | chr4.2:2965881-2965900 | MS.gene06155:CDS | 55.0% |
| ! | AGCATCCTGCTGCTTGTGCA+TGG | - | chr4.2:2966883-2966902 | None:intergenic | 55.0% |
| ! | AGTCCACATCCCGATTCGCA+AGG | - | chr4.2:2966713-2966732 | None:intergenic | 55.0% |
| ! | CCACACCTTTTGACGAGGTC+CGG | - | chr4.2:2965405-2965424 | None:intergenic | 55.0% |
| ! | CCTGCTGCTTGTGCATGGAT+TGG | - | chr4.2:2966878-2966897 | None:intergenic | 55.0% |
| ! | CGGCTTTGACACAGCTGTTG+AGG | + | chr4.2:2966423-2966442 | MS.gene06155:CDS | 55.0% |
| ! | GGAACCTATCGGCTATCGGA+CGG | + | chr4.2:2965099-2965118 | MS.gene06155:intron | 55.0% |
| ! | GGGATACATTTTCGGCGTGC+CGG | + | chr4.2:2965383-2965402 | MS.gene06155:CDS | 55.0% |
| ! | GTCCACATCCCGATTCGCAA+GGG | - | chr4.2:2966712-2966731 | None:intergenic | 55.0% |
| !! | TTGCGCCGGTTACCTCAATG+TGG | + | chr4.2:2966980-2966999 | MS.gene06155:intron | 55.0% |
| !!! | AAGTTTTGGGCGCATGGTGC+AGG | + | chr4.2:2966666-2966685 | MS.gene06155:intron | 55.0% |
| !!! | GAGCCTAAGTTTTGGGCGCA+TGG | + | chr4.2:2966660-2966679 | MS.gene06155:intron | 55.0% |
| AAGCACGCGAAGCTGACAGG+TGG | - | chr4.2:2966567-2966586 | None:intergenic | 60.0% | |
| CACCCTTGCGAATCGGGATG+TGG | + | chr4.2:2966707-2966726 | MS.gene06155:CDS | 60.0% | |
| CCGGACCTCGTCAAAAGGTG+TGG | + | chr4.2:2965402-2965421 | MS.gene06155:intron | 60.0% | |
| GCGGTTCATGGAGCAATGGC+AGG | + | chr4.2:2967713-2967732 | MS.gene06155:CDS | 60.0% | |
| GGAGCAATGGCAGGCTACAC+TGG | + | chr4.2:2967722-2967741 | MS.gene06155:CDS | 60.0% | |
| GTCCACCTCGCGATGAACCA+AGG | - | chr4.2:2965901-2965920 | None:intergenic | 60.0% | |
| ! | CACATCCCGATTCGCAAGGG+TGG | - | chr4.2:2966709-2966728 | None:intergenic | 60.0% |
| CACGCGAAGCTGACAGGTGG+AGG | - | chr4.2:2966564-2966583 | None:intergenic | 65.0% | |
| GCGTGCCGGACCTCGTCAAA+AGG | + | chr4.2:2965397-2965416 | MS.gene06155:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 2964179 | 2967793 | 2964179 | ID=MS.gene06155 |
| chr4.2 | mRNA | 2964179 | 2967793 | 2964179 | ID=MS.gene06155.t1;Parent=MS.gene06155 |
| chr4.2 | exon | 2964179 | 2964328 | 2964179 | ID=MS.gene06155.t1.exon1;Parent=MS.gene06155.t1 |
| chr4.2 | CDS | 2964179 | 2964328 | 2964179 | ID=cds.MS.gene06155.t1;Parent=MS.gene06155.t1 |
| chr4.2 | exon | 2964450 | 2964496 | 2964450 | ID=MS.gene06155.t1.exon2;Parent=MS.gene06155.t1 |
| chr4.2 | CDS | 2964450 | 2964496 | 2964450 | ID=cds.MS.gene06155.t1;Parent=MS.gene06155.t1 |
| chr4.2 | exon | 2964597 | 2964636 | 2964597 | ID=MS.gene06155.t1.exon3;Parent=MS.gene06155.t1 |
| chr4.2 | CDS | 2964597 | 2964636 | 2964597 | ID=cds.MS.gene06155.t1;Parent=MS.gene06155.t1 |
| chr4.2 | exon | 2965356 | 2965418 | 2965356 | ID=MS.gene06155.t1.exon4;Parent=MS.gene06155.t1 |
| chr4.2 | CDS | 2965356 | 2965418 | 2965356 | ID=cds.MS.gene06155.t1;Parent=MS.gene06155.t1 |
| chr4.2 | exon | 2965498 | 2965635 | 2965498 | ID=MS.gene06155.t1.exon5;Parent=MS.gene06155.t1 |
| chr4.2 | CDS | 2965498 | 2965635 | 2965498 | ID=cds.MS.gene06155.t1;Parent=MS.gene06155.t1 |
| chr4.2 | exon | 2965812 | 2965970 | 2965812 | ID=MS.gene06155.t1.exon6;Parent=MS.gene06155.t1 |
| chr4.2 | CDS | 2965812 | 2965970 | 2965812 | ID=cds.MS.gene06155.t1;Parent=MS.gene06155.t1 |
| chr4.2 | exon | 2966059 | 2966112 | 2966059 | ID=MS.gene06155.t1.exon7;Parent=MS.gene06155.t1 |
| chr4.2 | CDS | 2966059 | 2966112 | 2966059 | ID=cds.MS.gene06155.t1;Parent=MS.gene06155.t1 |
| chr4.2 | exon | 2966214 | 2966282 | 2966214 | ID=MS.gene06155.t1.exon8;Parent=MS.gene06155.t1 |
| chr4.2 | CDS | 2966214 | 2966282 | 2966214 | ID=cds.MS.gene06155.t1;Parent=MS.gene06155.t1 |
| chr4.2 | exon | 2966406 | 2966535 | 2966406 | ID=MS.gene06155.t1.exon9;Parent=MS.gene06155.t1 |
| chr4.2 | CDS | 2966406 | 2966535 | 2966406 | ID=cds.MS.gene06155.t1;Parent=MS.gene06155.t1 |
| chr4.2 | exon | 2966688 | 2966956 | 2966688 | ID=MS.gene06155.t1.exon10;Parent=MS.gene06155.t1 |
| chr4.2 | CDS | 2966688 | 2966956 | 2966688 | ID=cds.MS.gene06155.t1;Parent=MS.gene06155.t1 |
| chr4.2 | exon | 2967494 | 2967542 | 2967494 | ID=MS.gene06155.t1.exon11;Parent=MS.gene06155.t1 |
| chr4.2 | CDS | 2967494 | 2967542 | 2967494 | ID=cds.MS.gene06155.t1;Parent=MS.gene06155.t1 |
| chr4.2 | exon | 2967639 | 2967793 | 2967639 | ID=MS.gene06155.t1.exon12;Parent=MS.gene06155.t1 |
| chr4.2 | CDS | 2967639 | 2967793 | 2967639 | ID=cds.MS.gene06155.t1;Parent=MS.gene06155.t1 |
| Gene Sequence |
| Protein sequence |
