AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene061558

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene061558.t1 MTR_3g064840 96.037 429 8 4 1 425 1 424 0.0 827
MS.gene061558.t1 MTR_8g066310 59.333 150 42 4 259 397 157 298 8.56e-49 170
MS.gene061558.t1 MTR_5g029470 62.179 156 41 5 257 402 201 348 5.81e-48 169
MS.gene061558.t1 MTR_6g071625 43.820 267 98 9 142 404 101 319 9.66e-46 162
MS.gene061558.t1 MTR_1g021520 59.055 127 48 1 269 395 120 242 1.59e-39 144
MS.gene061558.t1 MTR_7g069660 64.179 67 23 1 268 334 65 130 2.51e-21 95.1
MS.gene061558.t1 MTR_0223s0040 65.517 58 20 0 274 331 17 74 1.38e-20 91.7
MS.gene061558.t1 MTR_1g112370 63.793 58 21 0 274 331 21 78 5.20e-20 90.9
MS.gene061558.t1 MTR_2g084230 65.574 61 21 0 274 334 96 156 9.07e-20 89.7
MS.gene061558.t1 MTR_2g023580 67.241 58 19 0 274 331 54 111 1.30e-19 87.8
MS.gene061558.t1 MTR_1g080330 43.860 114 48 3 255 354 143 254 1.36e-19 89.0
MS.gene061558.t1 MTR_2g084230 68.966 58 18 0 274 331 96 153 1.61e-19 90.1
MS.gene061558.t1 MTR_1g080330 43.860 114 48 3 255 354 143 254 2.55e-19 89.7
MS.gene061558.t1 MTR_8g086410 67.241 58 19 0 274 331 108 165 6.00e-19 89.0
MS.gene061558.t1 MTR_8g086410 67.241 58 19 0 274 331 110 167 6.08e-19 89.0
MS.gene061558.t1 MTR_7g093030 48.837 86 41 2 277 361 214 297 3.03e-18 86.3
MS.gene061558.t1 MTR_7g093030 51.250 80 36 2 277 355 214 291 3.77e-18 84.7
MS.gene061558.t1 MTR_7g098250 50.000 86 43 0 276 361 263 348 4.29e-18 86.7
MS.gene061558.t1 MTR_2g016220 62.295 61 23 0 274 334 88 148 1.04e-17 84.7
MS.gene061558.t1 MTR_2g016220 62.295 61 23 0 274 334 88 148 1.13e-17 84.7
MS.gene061558.t1 MTR_8g086410 64.286 56 20 0 274 329 110 165 4.66e-17 83.2
MS.gene061558.t1 MTR_7g115530 54.930 71 30 1 276 346 219 287 6.69e-17 82.0
MS.gene061558.t1 MTR_3g450310 58.929 56 23 0 276 331 20 75 1.06e-16 79.0
MS.gene061558.t1 MTR_7g115530 64.286 56 20 0 276 331 219 274 1.06e-16 80.9
MS.gene061558.t1 MTR_7g115530 64.286 56 20 0 276 331 219 274 2.24e-16 80.1
MS.gene061558.t1 MTR_5g027440 67.925 53 17 0 276 328 26 78 2.43e-16 79.3
MS.gene061558.t1 MTR_1g053835 57.377 61 26 0 277 337 260 320 2.81e-16 80.9
MS.gene061558.t1 MTR_7g115530 64.286 56 20 0 276 331 219 274 2.96e-16 80.9
MS.gene061558.t1 MTR_2g016220 58.462 65 23 1 274 334 88 152 8.68e-16 79.0
MS.gene061558.t1 MTR_1g090670 54.930 71 31 1 276 346 45 114 1.26e-15 77.4
MS.gene061558.t1 MTR_2g027800 54.286 70 31 1 276 345 40 108 1.29e-15 77.8
MS.gene061558.t1 MTR_7g088070 63.636 55 20 0 277 331 52 106 1.47e-15 77.0
MS.gene061558.t1 MTR_7g088070 63.636 55 20 0 277 331 52 106 1.64e-15 76.6
MS.gene061558.t1 MTR_2g027860 63.636 55 20 0 277 331 51 105 4.13e-15 76.3
MS.gene061558.t1 MTR_6g444980 51.429 70 34 0 276 345 36 105 4.56e-15 76.6
MS.gene061558.t1 MTR_6g444980 51.429 70 34 0 276 345 36 105 5.63e-15 76.6
MS.gene061558.t1 MTR_2g086450 58.929 56 23 0 276 331 46 101 7.98e-15 76.3
MS.gene061558.t1 MTR_7g115530 60.000 55 22 0 276 330 219 273 2.07e-14 73.9
MS.gene061558.t1 MTR_2g027800 62.264 53 20 0 276 328 40 92 2.12e-14 73.9
MS.gene061558.t1 MTR_7g115530 66.000 50 17 0 276 325 219 268 3.17e-14 73.2
MS.gene061558.t1 MTR_6g032990 54.237 59 27 0 276 334 43 101 4.13e-14 73.9
MS.gene061558.t1 MTR_5g041350 52.632 57 27 0 276 332 16 72 5.16e-14 73.2
MS.gene061558.t1 MTR_4g081710 54.386 57 26 0 276 332 18 74 1.44e-13 72.0
MS.gene061558.t1 MTR_1g053830 49.180 61 31 0 277 337 20 80 3.56e-13 65.9
MS.gene061558.t1 MTR_1g053800 36.697 109 53 3 277 369 179 287 1.73e-12 68.6
MS.gene061558.t1 MTR_7g068600 43.373 83 44 1 277 356 15 97 1.96e-12 67.0
MS.gene061558.t1 MTR_4g113140 48.529 68 35 0 274 341 234 301 1.41e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene061558.t1 AT5G16560 42.019 426 149 15 1 406 1 348 2.70e-72 233
MS.gene061558.t1 AT1G32240 59.627 161 41 4 235 391 186 326 5.59e-50 173
MS.gene061558.t1 AT1G32240 57.225 173 48 5 225 391 174 326 1.21e-49 173
MS.gene061558.t1 AT4G17695 55.639 133 48 2 265 389 154 283 2.46e-38 141
MS.gene061558.t1 AT5G42630 55.000 140 46 4 224 357 59 187 1.21e-36 134
MS.gene061558.t1 AT5G42630 72.727 88 24 0 270 357 100 187 4.81e-36 134
MS.gene061558.t1 AT2G38300 38.255 149 79 4 274 419 53 191 3.99e-21 94.4
MS.gene061558.t1 AT4G04605 67.241 58 19 0 274 331 13 70 3.06e-20 89.4
MS.gene061558.t1 AT2G02060 65.625 64 20 1 275 336 29 92 7.26e-20 89.0
MS.gene061558.t1 AT2G02060 65.625 64 20 1 275 336 29 92 7.26e-20 89.0
MS.gene061558.t1 AT1G14600 66.102 59 20 0 275 333 23 81 1.52e-19 88.2
MS.gene061558.t1 AT2G40260 35.519 183 89 5 237 417 62 217 4.36e-19 89.4
MS.gene061558.t1 AT4G04580 59.322 59 24 0 276 334 15 73 2.49e-18 82.4
MS.gene061558.t1 AT2G42660 66.071 56 19 0 276 331 51 106 1.02e-17 82.8
MS.gene061558.t1 AT5G45580 54.430 79 26 2 250 328 8 76 1.49e-17 82.8
MS.gene061558.t1 AT4G04555 58.621 58 24 0 274 331 13 70 2.00e-17 78.2
MS.gene061558.t1 AT5G45580 67.925 53 17 0 276 328 8 60 3.23e-17 81.6
MS.gene061558.t1 AT4G28610 58.730 63 26 0 277 339 227 289 4.86e-16 80.1
MS.gene061558.t1 AT2G01060 63.636 55 20 0 277 331 17 71 2.48e-15 76.6
MS.gene061558.t1 AT3G12730 60.714 56 22 0 276 331 24 79 2.54e-15 75.5
MS.gene061558.t1 AT1G32240 54.651 86 28 3 310 391 1 79 3.19e-15 72.8
MS.gene061558.t1 AT3G04450 55.714 70 30 1 263 331 225 294 4.71e-15 76.3
MS.gene061558.t1 AT4G13640 62.264 53 20 0 276 328 38 90 6.25e-15 75.5
MS.gene061558.t1 AT5G29000 55.385 65 29 0 277 341 233 297 6.29e-15 75.9
MS.gene061558.t1 AT4G13640 62.264 53 20 0 276 328 38 90 6.45e-15 75.5
MS.gene061558.t1 AT1G79430 50.704 71 35 0 276 346 35 105 8.16e-15 75.9
MS.gene061558.t1 AT5G29000 63.636 55 20 0 277 331 190 244 8.39e-15 75.9
MS.gene061558.t1 AT5G29000 63.636 55 20 0 277 331 190 244 8.39e-15 75.9
MS.gene061558.t1 AT3G24120 55.000 60 27 0 276 335 42 101 1.02e-14 74.7
MS.gene061558.t1 AT3G04450 55.714 70 30 1 263 331 225 294 1.06e-14 76.3
MS.gene061558.t1 AT3G24120 55.000 60 27 0 276 335 42 101 1.08e-14 74.7
MS.gene061558.t1 AT5G18240 52.308 65 31 0 276 340 46 110 1.10e-14 75.9
MS.gene061558.t1 AT5G18240 52.308 65 31 0 276 340 46 110 1.10e-14 75.9
MS.gene061558.t1 AT5G29000 63.636 55 20 0 277 331 233 287 1.10e-14 75.9
MS.gene061558.t1 AT3G04450 55.714 70 30 1 263 331 185 254 1.10e-14 75.9
MS.gene061558.t1 AT3G04450 55.714 70 30 1 263 331 185 254 1.10e-14 75.9
MS.gene061558.t1 AT5G06800 56.364 55 24 0 277 331 194 248 1.22e-14 74.3
MS.gene061558.t1 AT5G18240 52.308 65 31 0 276 340 46 110 1.23e-14 75.5
MS.gene061558.t1 AT5G18240 52.308 65 31 0 276 340 46 110 1.27e-14 75.5
MS.gene061558.t1 AT5G18240 52.308 65 31 0 276 340 46 110 1.27e-14 75.5
MS.gene061558.t1 AT5G06800 40.698 86 48 2 277 361 194 277 2.37e-14 74.7
MS.gene061558.t1 AT3G04030 49.231 65 33 0 276 340 46 110 2.69e-14 74.7
MS.gene061558.t1 AT5G06800 37.079 89 52 1 277 361 194 282 2.69e-14 74.3
MS.gene061558.t1 AT3G04030 49.231 65 33 0 276 340 46 110 3.16e-14 74.3
MS.gene061558.t1 AT2G20400 57.812 64 27 0 277 340 233 296 4.60e-14 73.9
MS.gene061558.t1 AT2G20400 57.143 63 27 0 277 339 233 295 7.76e-14 73.2
MS.gene061558.t1 AT2G06020 47.436 78 40 1 251 328 63 139 1.54e-13 71.2
MS.gene061558.t1 AT3G13040 61.818 55 21 0 277 331 243 297 1.97e-13 72.4
MS.gene061558.t1 AT3G13040 61.818 55 21 0 277 331 243 297 1.97e-13 72.4
MS.gene061558.t1 AT3G13040 61.818 55 21 0 277 331 243 297 1.97e-13 72.4
MS.gene061558.t1 AT1G69580 50.877 57 28 0 276 332 35 91 2.20e-12 68.2
MS.gene061558.t1 AT1G69580 50.877 57 28 0 276 332 35 91 2.33e-12 68.2
MS.gene061558.t1 AT2G03500 45.652 92 44 2 269 360 227 312 2.70e-12 68.6
MS.gene061558.t1 AT3G04030 47.692 65 33 1 276 340 46 109 8.05e-12 67.0
MS.gene061558.t1 AT1G68670 43.678 87 47 1 274 360 214 298 2.09e-11 65.5
MS.gene061558.t1 AT5G58080 37.405 131 68 6 274 392 193 321 3.66e-11 65.5

Find 84 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTTCCATGGCTGGTAAAA+AGG 0.206571 3.2:-60373786 None:intergenic
GTTCATGCTGTTGAGCTTCT+TGG 0.223702 3.2:+60374181 MS.gene061558:CDS
GTACTTGTCCATCGCATTCT+TGG 0.295531 3.2:-60374142 None:intergenic
AGAATTATGAGGTTCATAAT+TGG 0.296903 3.2:-60373438 None:intergenic
CACATGAATCACATAAATTA+TGG 0.301972 3.2:+60373677 MS.gene061558:CDS
GAAGGAGACGGAGTTGAATT+AGG 0.345696 3.2:-60373851 None:intergenic
GGTGTTGTTGATGTTGAAAT+TGG 0.348173 3.2:-60373344 None:intergenic
GAGGATGATGTACCACAAAT+TGG 0.348731 3.2:+60375648 MS.gene061558:CDS
ACTCATCCACCAACACTCTA+TGG 0.365181 3.2:+60375745 MS.gene061558:CDS
ATTTGATGTCCTCCTGATAT+TGG 0.366341 3.2:-60377976 None:intergenic
GACAAACCTGCAGCTTCTTC+AGG 0.367603 3.2:+60375253 MS.gene061558:CDS
CCACCATTGCTTCCAATTTG+TGG 0.370237 3.2:-60375660 None:intergenic
TGGTGATATAAACACATCTT+TGG 0.387535 3.2:-60373824 None:intergenic
TTTGGACTTGTTTGTGGCCA+TGG 0.402795 3.2:-60377913 None:intergenic
TTCCAATCACAACCAATATC+AGG 0.403005 3.2:+60377964 MS.gene061558:CDS
ATCAGGAGGACATCAAATTC+AGG 0.406345 3.2:+60377981 MS.gene061558:CDS
TCTCTTGAATGTTCCATGGC+TGG 0.423245 3.2:-60373794 None:intergenic
CTCCTGATATTGGTTGTGAT+TGG 0.426736 3.2:-60377966 None:intergenic
TAATTCTTCAAGAACAACTT+TGG 0.432310 3.2:+60373454 MS.gene061558:CDS
CATCATCATCACTCACACTA+TGG 0.433882 3.2:+60374034 MS.gene061558:CDS
TAGACCATTACAGCAAGATA+TGG 0.437170 3.2:+60375719 MS.gene061558:CDS
ATCAGTTCCAATACTGACTT+TGG 0.438924 3.2:-60374699 None:intergenic
TAATCCATATCTTGCTGTAA+TGG 0.441711 3.2:-60375723 None:intergenic
CTCTATGGAGTAATTCTTCA+AGG 0.442637 3.2:+60375760 MS.gene061558:CDS
CTGAAACCATCTATGTCGTT+TGG 0.446505 3.2:-60377931 None:intergenic
TAGACTGGAATCCCTTTGAT+TGG 0.450416 3.2:-60373746 None:intergenic
TTAGGCCTTTCAGATGGATC+TGG 0.451188 3.2:+60375624 MS.gene061558:intron
TAAACCTCCTGCAGCTATGT+AGG 0.458036 3.2:-60373897 None:intergenic
ACAAGTCCAAACGACATAGA+TGG 0.458406 3.2:+60377925 MS.gene061558:CDS
ATGTCGTTTGGACTTGTTTG+TGG 0.463624 3.2:-60377919 None:intergenic
TTTAAACTCAAGTGGCTCTA+CGG 0.477786 3.2:+60373934 MS.gene061558:CDS
ATACAATACATACCTGCAAA+TGG 0.483907 3.2:-60374758 None:intergenic
GCTCACACTGAACTATCTCT+TGG 0.484804 3.2:+60373488 MS.gene061558:CDS
AGTGGAGAAGAAGACGAAGA+AGG 0.485724 3.2:-60373869 None:intergenic
CACTCACACTATGGTAGTGT+TGG 0.486314 3.2:+60374043 MS.gene061558:CDS
GGTTGTGATTGGAAGATAGT+TGG 0.486453 3.2:-60377955 None:intergenic
CATGCTGTTGAGCTTCTTGG+TGG 0.491060 3.2:+60374184 MS.gene061558:CDS
AAACCTCCTGCAGCTATGTA+GGG 0.495440 3.2:-60373896 None:intergenic
GTTGTTCTTGAAGAATTATG+AGG 0.504302 3.2:-60373449 None:intergenic
AAAGAAGAATTAGAAGTACT+TGG 0.514145 3.2:-60373395 None:intergenic
AAAGTCAGTATTGGAACTGA+TGG 0.515750 3.2:+60374701 MS.gene061558:CDS
TTCAATGAAAATCCCTTCCA+AGG 0.520306 3.2:-60373321 None:intergenic
AGCAACACCAAAGTCAGTAT+TGG 0.520531 3.2:+60374692 MS.gene061558:CDS
AAGCATCCATGATGAGATCA+AGG 0.522822 3.2:+60374080 MS.gene061558:CDS
CTAAAGAAGATGCCCTTGGA+AGG 0.522865 3.2:+60373308 None:intergenic
AATGAACGGTTGTGATAGAC+TGG 0.528800 3.2:-60373761 None:intergenic
CTTATATGAAGAGAAAGATC+AGG 0.531476 3.2:-60373368 None:intergenic
AGTGAGGAAAATGAGCTTGT+TGG 0.536485 3.2:-60373586 None:intergenic
ATTACTCCATAGAGTGTTGG+TGG 0.540356 3.2:-60375751 None:intergenic
CCACAAATTGGAAGCAATGG+TGG 0.541302 3.2:+60375660 MS.gene061558:CDS
GGTTGTTGTTGATGTTGTTG+TGG 0.543246 3.2:-60373542 None:intergenic
GAAGAATTAGAAGTACTTGG+AGG 0.543694 3.2:-60373392 None:intergenic
AAGGGTTAAGACCAATCAAA+GGG 0.548805 3.2:+60373735 MS.gene061558:CDS
TGATGATGATGGTGGTGCAA+TGG 0.555394 3.2:-60374019 None:intergenic
TTATGAGGTTCATAATTGGA+TGG 0.559155 3.2:-60373434 None:intergenic
GAAGGGTTAAGACCAATCAA+AGG 0.563565 3.2:+60373734 MS.gene061558:CDS
GTTGGATTAGGCCTTTCAGA+TGG 0.563620 3.2:+60375618 MS.gene061558:intron
TAAAGAAGATGCCCTTGGAA+GGG 0.566491 3.2:+60373309 None:intergenic
CACTATGGTAGTGTTGGACT+TGG 0.566713 3.2:+60374049 MS.gene061558:CDS
GAATTACCTGAAGAAGCTGC+AGG 0.569581 3.2:-60375259 None:intergenic
GTGTCATCAACATCATCAGA+AGG 0.572682 3.2:+60373716 MS.gene061558:CDS
AGAATTACTCCATAGAGTGT+TGG 0.593216 3.2:-60375754 None:intergenic
GGATATTGATGAGATTTGAA+AGG 0.597530 3.2:-60373998 None:intergenic
GAAGAAGACGAAGAAGGAGA+CGG 0.598612 3.2:-60373863 None:intergenic
ATCGAGCCGCTGTAGCCACA+AGG 0.610423 3.2:+60373963 MS.gene061558:CDS
GTACCACAAATTGGAAGCAA+TGG 0.620505 3.2:+60375657 MS.gene061558:CDS
AACCTCCTGCAGCTATGTAG+GGG 0.620521 3.2:-60373895 None:intergenic
TGAGAGCACCAAGAATGCGA+TGG 0.625062 3.2:+60374134 MS.gene061558:CDS
ATTAAACCTTGTGGCTACAG+CGG 0.630486 3.2:-60373969 None:intergenic
CCTCTCCAGATCCATCTGAA+AGG 0.630610 3.2:-60375629 None:intergenic
TTGTTGTGATGTTGAAAGTG+AGG 0.638425 3.2:-60373602 None:intergenic
AAACTCAAGTGGCTCTACGG+CGG 0.640611 3.2:+60373937 MS.gene061558:CDS
TCAATGAAAATCCCTTCCAA+GGG 0.641425 3.2:-60373320 None:intergenic
AGGCTCGTTATTAAACCTTG+TGG 0.646124 3.2:-60373978 None:intergenic
TGTCATCAACATCATCAGAA+GGG 0.646503 3.2:+60373717 MS.gene061558:CDS
ATTGGAACTGATGGATGTGA+AGG 0.646666 3.2:+60374710 MS.gene061558:CDS
ACCTCCTGCAGCTATGTAGG+GGG 0.649226 3.2:-60373894 None:intergenic
CCTTTCAGATGGATCTGGAG+AGG 0.652978 3.2:+60375629 MS.gene061558:CDS
GTGAGTGATGATGATGATGG+TGG 0.675410 3.2:-60374027 None:intergenic
ATATGAAGAGAAAGATCAGG+TGG 0.676710 3.2:-60373365 None:intergenic
ACGGAGTTGAATTAGGCATG+TGG 0.690652 3.2:-60373844 None:intergenic
CAATCACAACCAATATCAGG+AGG 0.694629 3.2:+60377967 MS.gene061558:CDS
AGTGTGAGTGATGATGATGA+TGG 0.709391 3.2:-60374030 None:intergenic
TGATCAGTAGTAGAGAACCA+TGG 0.715843 3.2:+60377896 MS.gene061558:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTAATAAATTTATTTT+TGG + chr3.2:60375577-60375596 MS.gene061558:intron 0.0%
!! ACTCAAATTAATTAAAATTT+AGG - chr3.2:60376993-60377012 None:intergenic 10.0%
!! ATATATATAAAATTTAAGCA+AGG - chr3.2:60375517-60375536 None:intergenic 10.0%
!! ATTTAATAATTGAAAACAAA+AGG - chr3.2:60374347-60374366 None:intergenic 10.0%
!!! TTTTTTATGAAGAATAAAAA+GGG + chr3.2:60375961-60375980 MS.gene061558:intron 10.0%
!! AAAAAAATGTGAAAAGAATA+AGG - chr3.2:60375399-60375418 None:intergenic 15.0%
!! AAAGTGAAAATTTAAGTAAA+GGG - chr3.2:60376800-60376819 None:intergenic 15.0%
!! AAATATCTTGAATACTATAA+AGG - chr3.2:60377184-60377203 None:intergenic 15.0%
!! AGTAATTATAAATTAACTGT+TGG + chr3.2:60375600-60375619 MS.gene061558:intron 15.0%
!! ATAACTTATTCAATACAAAT+AGG + chr3.2:60375096-60375115 MS.gene061558:intron 15.0%
!! ATATGAAATTGAAATGAAAT+TGG + chr3.2:60374794-60374813 MS.gene061558:intron 15.0%
!! GTAATTATTAGACTAATTAA+GGG - chr3.2:60375314-60375333 None:intergenic 15.0%
!! TATCAAAAACAAAATAAAGA+AGG - chr3.2:60377027-60377046 None:intergenic 15.0%
!! TATGAAATTGAAATGAAATT+GGG + chr3.2:60374795-60374814 MS.gene061558:intron 15.0%
!! TGAAAAAAGTTTATAAATTC+TGG + chr3.2:60377707-60377726 MS.gene061558:intron 15.0%
!! TTAAAAGAAGAAAATTAAAG+TGG - chr3.2:60374235-60374254 None:intergenic 15.0%
!!! AAATCCTTAGTATTTTTTTA+AGG + chr3.2:60376696-60376715 MS.gene061558:intron 15.0%
!!! AAGATATTTTAAAAATTGAG+AGG + chr3.2:60377195-60377214 MS.gene061558:intron 15.0%
!!! AATAATTTGTTAATGTTACT+TGG - chr3.2:60376396-60376415 None:intergenic 15.0%
!!! AATACTATTTTTCCAATAAT+TGG - chr3.2:60377663-60377682 None:intergenic 15.0%
!!! CTTAATTAGTCTAATAATTA+CGG + chr3.2:60375313-60375332 MS.gene061558:intron 15.0%
!!! CTTTTATATATATGTTTAAG+AGG - chr3.2:60375480-60375499 None:intergenic 15.0%
!!! CTTTTTTATGAAGAATAAAA+AGG + chr3.2:60375960-60375979 MS.gene061558:intron 15.0%
!! AAATGAAAAACAAACACTTA+TGG - chr3.2:60377536-60377555 None:intergenic 20.0%
!! AAATTTAAGCAAGGTAATTA+AGG - chr3.2:60375508-60375527 None:intergenic 20.0%
!! AACATATGGTAATAATTTCA+TGG - chr3.2:60376760-60376779 None:intergenic 20.0%
!! AATTAATAAACAAAGATGAG+TGG + chr3.2:60374371-60374390 MS.gene061558:intron 20.0%
!! ACATATGGTAATAATTTCAT+GGG - chr3.2:60376759-60376778 None:intergenic 20.0%
!! ACATTTCTAAATACAACATA+TGG - chr3.2:60376774-60376793 None:intergenic 20.0%
!! ACTAATTAAGGGAAAAAAAA+TGG - chr3.2:60375303-60375322 None:intergenic 20.0%
!! ATAATTGAAAACAAAAGGAA+CGG - chr3.2:60374342-60374361 None:intergenic 20.0%
!! ATTATAGTGTTACATTTCAT+TGG + chr3.2:60376507-60376526 MS.gene061558:intron 20.0%
!! CAAAAGTAAATAAACAAAGT+CGG - chr3.2:60375883-60375902 None:intergenic 20.0%
!! CGTAATTATTAGACTAATTA+AGG - chr3.2:60375315-60375334 None:intergenic 20.0%
!! GAAAGTGAAAATTTAAGTAA+AGG - chr3.2:60376801-60376820 None:intergenic 20.0%
!! GAATTATATTTGAGTGTAAT+TGG + chr3.2:60377475-60377494 MS.gene061558:intron 20.0%
!! TATAAATTAACTGTTGGATT+AGG + chr3.2:60375606-60375625 MS.gene061558:intron 20.0%
!! TCCTAATATTACAAATTTCA+AGG + chr3.2:60376220-60376239 MS.gene061558:intron 20.0%
!! TTCACATATATAGACTTTAA+AGG - chr3.2:60375439-60375458 None:intergenic 20.0%
!!! AAAGATTGATTTAGATTCAA+TGG + chr3.2:60376945-60376964 MS.gene061558:intron 20.0%
!!! AAGATTGATTTAGATTCAAT+GGG + chr3.2:60376946-60376965 MS.gene061558:intron 20.0%
!!! ATTGTTGTTGTTAATATGTT+TGG + chr3.2:60374620-60374639 MS.gene061558:intron 20.0%
!!! CTCAATTTGTTTTTATAAGT+TGG + chr3.2:60376434-60376453 MS.gene061558:intron 20.0%
!!! GTAACATAGAAATTTAGAAT+TGG + chr3.2:60376597-60376616 MS.gene061558:intron 20.0%
! AAAAAATTGCATCAGTTCAA+TGG - chr3.2:60377843-60377862 None:intergenic 25.0%
! AAGGTACAAAAGATATACAA+AGG - chr3.2:60376045-60376064 None:intergenic 25.0%
! AATTAAAATTTAGGTGCAAG+AGG - chr3.2:60376984-60377003 None:intergenic 25.0%
! AATTAAGTAGTAAGCTAAGA+AGG + chr3.2:60374891-60374910 MS.gene061558:intron 25.0%
! AATTTCTTGTGTTGAAATTG+TGG + chr3.2:60375148-60375167 MS.gene061558:intron 25.0%
! AATTTGATACAGGTGTAAAA+TGG - chr3.2:60374454-60374473 None:intergenic 25.0%
! ACAAAATAAAGAAGGTTTAC+AGG - chr3.2:60377019-60377038 None:intergenic 25.0%
! AGAATTATGAGGTTCATAAT+TGG - chr3.2:60373441-60373460 None:intergenic 25.0%
! AGATATTTCATGTTCACTTA+AGG - chr3.2:60377359-60377378 None:intergenic 25.0%
! ATTAAAATTTAGGTGCAAGA+GGG - chr3.2:60376983-60377002 None:intergenic 25.0%
! CACATGAATCACATAAATTA+TGG + chr3.2:60373677-60373696 MS.gene061558:CDS 25.0%
! GAGAAAAATGTTTACTTTCA+TGG - chr3.2:60374210-60374229 None:intergenic 25.0%
! GCCTTGAAATTTGTAATATT+AGG - chr3.2:60376224-60376243 None:intergenic 25.0%
! GGAAAAATAGTATTCTACAT+TGG + chr3.2:60377669-60377688 MS.gene061558:intron 25.0%
! GGATCCTTAAAAAAATACTA+AGG - chr3.2:60376703-60376722 None:intergenic 25.0%
! TAAAATATGCATTAATCACG+AGG - chr3.2:60375064-60375083 None:intergenic 25.0%
! TAATTCTTCAAGAACAACTT+TGG + chr3.2:60373454-60373473 MS.gene061558:CDS 25.0%
! TCAAGATCCATATCAATATT+CGG - chr3.2:60376265-60376284 None:intergenic 25.0%
! TCTCATTAAGTAAACATTAG+TGG + chr3.2:60377411-60377430 MS.gene061558:intron 25.0%
! TGTAAAATGGTCATTAGTAT+CGG - chr3.2:60374441-60374460 None:intergenic 25.0%
!! AGATTGATTTAGATTCAATG+GGG + chr3.2:60376947-60376966 MS.gene061558:intron 25.0%
!! TATATATGTGAACACTTTTG+AGG + chr3.2:60375447-60375466 MS.gene061558:intron 25.0%
!! TGATTTAGATGGTGAATTTT+AGG + chr3.2:60374669-60374688 MS.gene061558:intron 25.0%
!! TGTAAGTTGACAATATAATC+TGG + chr3.2:60376555-60376574 MS.gene061558:intron 25.0%
!!! AAAGAAGAATTAGAAGTACT+TGG - chr3.2:60373398-60373417 None:intergenic 25.0%
!!! AACTGATGCAATTTTTTTCT+TGG + chr3.2:60377846-60377865 MS.gene061558:intron 25.0%
!!! ATATGTTTGGTGTTATAGAT+AGG + chr3.2:60374633-60374652 MS.gene061558:intron 25.0%
!!! CTTGTTGGTTTTGATAATAA+GGG - chr3.2:60373574-60373593 None:intergenic 25.0%
!!! TATTTACTTTTGCTTTTGCA+TGG + chr3.2:60375891-60375910 MS.gene061558:intron 25.0%
!!! TTTTGATAATAAGGGTTATG+TGG - chr3.2:60373566-60373585 None:intergenic 25.0%
!!! TTTTTTAGAGTGAGTCATTT+GGG - chr3.2:60376314-60376333 None:intergenic 25.0%
!!! TTTTTTTAGAGTGAGTCATT+TGG - chr3.2:60376315-60376334 None:intergenic 25.0%
AAACCTAACAAACTCTACTA+TGG + chr3.2:60376648-60376667 MS.gene061558:intron 30.0%
AAGAATAAAAAGGGTTCTTG+TGG + chr3.2:60375970-60375989 MS.gene061558:intron 30.0%
AAGGCTCATAATAGTAAGTT+TGG + chr3.2:60377453-60377472 MS.gene061558:intron 30.0%
AATGACAGACAGTAGTTAAT+AGG - chr3.2:60377286-60377305 None:intergenic 30.0%
ACCATGTGAAATTATTGATG+AGG + chr3.2:60376893-60376912 MS.gene061558:intron 30.0%
ACCTCATCAATAATTTCACA+TGG - chr3.2:60376897-60376916 None:intergenic 30.0%
ACGAAGATCAAATTTGATAC+AGG - chr3.2:60374464-60374483 None:intergenic 30.0%
ACTTGAGTTTAAAAACGACA+TGG - chr3.2:60373927-60373946 None:intergenic 30.0%
AGTGAATATGAATGAATGTG+TGG + chr3.2:60374848-60374867 MS.gene061558:intron 30.0%
ATACAATACATACCTGCAAA+TGG - chr3.2:60374761-60374780 None:intergenic 30.0%
ATGAGAGATTGTTGCATTAT+TGG - chr3.2:60375016-60375035 None:intergenic 30.0%
CAAGATCCATATCAATATTC+GGG - chr3.2:60376264-60376283 None:intergenic 30.0%
CATTAAGTAAACATTAGTGG+TGG + chr3.2:60377414-60377433 MS.gene061558:intron 30.0%
CTTATATGAAGAGAAAGATC+AGG - chr3.2:60373371-60373390 None:intergenic 30.0%
CTTATGGATGATACATTGAT+AGG - chr3.2:60377520-60377539 None:intergenic 30.0%
CTTGAGTTTAAAAACGACAT+GGG - chr3.2:60373926-60373945 None:intergenic 30.0%
GAATACTATAAAGGTAGAAC+TGG - chr3.2:60377175-60377194 None:intergenic 30.0%
GGATATTGATGAGATTTGAA+AGG - chr3.2:60374001-60374020 None:intergenic 30.0%
GTAAAATGGTCATTAGTATC+GGG - chr3.2:60374440-60374459 None:intergenic 30.0%
GTGAATATGAATGAATGTGT+GGG + chr3.2:60374849-60374868 MS.gene061558:intron 30.0%
GTTGTTCTTGAAGAATTATG+AGG - chr3.2:60373452-60373471 None:intergenic 30.0%
TAATCGAATGCTAATTCGTT+AGG + chr3.2:60376116-60376135 MS.gene061558:intron 30.0%
TAGTTGTAATACATAGCCTT+AGG + chr3.2:60377598-60377617 MS.gene061558:intron 30.0%
TCATAACCCGAATATTGATA+TGG + chr3.2:60376255-60376274 MS.gene061558:intron 30.0%
TGCTAATTCGTTAGGATAAA+AGG + chr3.2:60376124-60376143 MS.gene061558:intron 30.0%
TGGTGATATAAACACATCTT+TGG - chr3.2:60373827-60373846 None:intergenic 30.0%
TTATGAGGTTCATAATTGGA+TGG - chr3.2:60373437-60373456 None:intergenic 30.0%
TTGCACAAATCAAGAAATAG+TGG + chr3.2:60376458-60376477 MS.gene061558:intron 30.0%
TTTAAGCAAGGTAATTAAGG+TGG - chr3.2:60375505-60375524 None:intergenic 30.0%
TTTGGCTAATGTGATTTAGA+TGG + chr3.2:60374658-60374677 MS.gene061558:intron 30.0%
! ATGTTACTTGGAAGAATACA+TGG - chr3.2:60376384-60376403 None:intergenic 30.0%
! CCTCTAAAAAAATAGTCTAG+AGG + chr3.2:60376672-60376691 MS.gene061558:intron 30.0%
! GATTGATTTAGATTCAATGG+GGG + chr3.2:60376948-60376967 MS.gene061558:intron 30.0%
! GTCAATTTTCAGATCAAAGA+GGG + chr3.2:60375688-60375707 MS.gene061558:CDS 30.0%
! TAATCCATATCTTGCTGTAA+TGG - chr3.2:60375726-60375745 None:intergenic 30.0%
! TCTTTTGTACCTTAGTGATT+TGG + chr3.2:60376052-60376071 MS.gene061558:intron 30.0%
! TTTGAGTGTAATTGGCATTT+TGG + chr3.2:60377483-60377502 MS.gene061558:intron 30.0%
! TTTTTCTCTTGAATGTTCCA+TGG - chr3.2:60373801-60373820 None:intergenic 30.0%
!! CTTCATAAAAAAGAGTGTTG+TGG - chr3.2:60375953-60375972 None:intergenic 30.0%
!! GAGGTTGATGTTTGATAATA+AGG - chr3.2:60375045-60375064 None:intergenic 30.0%
!! TTGGGTTTTATGTAATCTAC+AGG - chr3.2:60376296-60376315 None:intergenic 30.0%
!!! ATGTCGTTTTTAAACTCAAG+TGG + chr3.2:60373926-60373945 MS.gene061558:CDS 30.0%
!!! CCTCTAGACTATTTTTTTAG+AGG - chr3.2:60376675-60376694 None:intergenic 30.0%
!!! CTTGGAAGAAATTTTAGTTG+TGG + chr3.2:60373506-60373525 MS.gene061558:CDS 30.0%
!!! GCTTGTTGGTTTTGATAATA+AGG - chr3.2:60373575-60373594 None:intergenic 30.0%
!!! TTTTTTTAAGGATCCACCTT+TGG + chr3.2:60376708-60376727 MS.gene061558:intron 30.0%
AAGGGTTAAGACCAATCAAA+GGG + chr3.2:60373735-60373754 MS.gene061558:CDS 35.0%
AGAATTACTCCATAGAGTGT+TGG - chr3.2:60375757-60375776 None:intergenic 35.0%
AGCTTAAGTACTAGTCGTTT+GGG - chr3.2:60376348-60376367 None:intergenic 35.0%
AGGCATGTCTTTCTCTTATT+AGG + chr3.2:60377215-60377234 MS.gene061558:intron 35.0%
ATAAACAAAGATGAGTGGAC+TGG + chr3.2:60374376-60374395 MS.gene061558:intron 35.0%
ATAATTGGAGATGCTCTTGA+TGG - chr3.2:60377648-60377667 None:intergenic 35.0%
ATAGCCAATGAAGAAGAAAG+TGG + chr3.2:60374822-60374841 MS.gene061558:intron 35.0%
ATATGAAGAGAAAGATCAGG+TGG - chr3.2:60373368-60373387 None:intergenic 35.0%
ATTTGATGTCCTCCTGATAT+TGG - chr3.2:60377979-60377998 None:intergenic 35.0%
CAAAAACCTTGATCTCATCA+TGG - chr3.2:60374089-60374108 None:intergenic 35.0%
CAAAACAGTTCATGCATGTT+TGG + chr3.2:60377803-60377822 MS.gene061558:intron 35.0%
CAAACATACACACAAGTCAA+AGG - chr3.2:60376198-60376217 None:intergenic 35.0%
CTCTATGGAGTAATTCTTCA+AGG + chr3.2:60375760-60375779 MS.gene061558:CDS 35.0%
CTTGTGAGAGTAAGACTATT+AGG + chr3.2:60374563-60374582 MS.gene061558:intron 35.0%
TAAGTAAACATTAGTGGTGG+TGG + chr3.2:60377417-60377436 MS.gene061558:intron 35.0%
TAGACCATTACAGCAAGATA+TGG + chr3.2:60375719-60375738 MS.gene061558:CDS 35.0%
TAGCACTTAAACCAATCCTA+AGG - chr3.2:60377617-60377636 None:intergenic 35.0%
TCAATGAAAATCCCTTCCAA+GGG - chr3.2:60373323-60373342 None:intergenic 35.0%
TCATGTAAAAAGCCATTTGC+AGG + chr3.2:60374746-60374765 MS.gene061558:CDS 35.0%
TGAGAGTAAGACTATTAGGT+GGG + chr3.2:60374567-60374586 MS.gene061558:intron 35.0%
TGTCATCAACATCATCAGAA+GGG + chr3.2:60373717-60373736 MS.gene061558:CDS 35.0%
TTACTATTATGAGCCTTGCA+TGG - chr3.2:60377450-60377469 None:intergenic 35.0%
TTCAATGAAAATCCCTTCCA+AGG - chr3.2:60373324-60373343 None:intergenic 35.0%
TTCCAATCACAACCAATATC+AGG + chr3.2:60377964-60377983 MS.gene061558:CDS 35.0%
TTGTTGTGATGTTGAAAGTG+AGG - chr3.2:60373605-60373624 None:intergenic 35.0%
! AAAGTCAGTATTGGAACTGA+TGG + chr3.2:60374701-60374720 MS.gene061558:CDS 35.0%
! CAGTGAAGGTTTTTAATGGA+GGG + chr3.2:60374297-60374316 MS.gene061558:intron 35.0%
! CGTCAATTTTCAGATCAAAG+AGG + chr3.2:60375687-60375706 MS.gene061558:CDS 35.0%
! CTTCTTTTTGTCGGCAATTT+AGG - chr3.2:60374112-60374131 None:intergenic 35.0%
! GTAATACATAGCCTTAGGAT+TGG + chr3.2:60377603-60377622 MS.gene061558:intron 35.0%
! TCTCCAGTGAAGGTTTTTAA+TGG + chr3.2:60374293-60374312 MS.gene061558:intron 35.0%
! TTTAAACTCAAGTGGCTCTA+CGG + chr3.2:60373934-60373953 MS.gene061558:CDS 35.0%
! TTTGTACCTTAGTGATTTGG+TGG + chr3.2:60376055-60376074 MS.gene061558:intron 35.0%
!! ATCAGTTCCAATACTGACTT+TGG - chr3.2:60374702-60374721 None:intergenic 35.0%
!! GAAGAATTAGAAGTACTTGG+AGG - chr3.2:60373395-60373414 None:intergenic 35.0%
!! GGTGTTGTTGATGTTGAAAT+TGG - chr3.2:60373347-60373366 None:intergenic 35.0%
!! TCAAGAGCATCTCCAATTAT+TGG + chr3.2:60377648-60377667 MS.gene061558:intron 35.0%
!! TGCATGAACTGTTTTGTTGA+TGG - chr3.2:60377799-60377818 None:intergenic 35.0%
!! TGGTGTTATAGATAGGTGTT+TGG + chr3.2:60374640-60374659 MS.gene061558:intron 35.0%
AAGCATCCATGATGAGATCA+AGG + chr3.2:60374080-60374099 MS.gene061558:CDS 40.0%
AATGAACGGTTGTGATAGAC+TGG - chr3.2:60373764-60373783 None:intergenic 40.0%
ACAAGTCCAAACGACATAGA+TGG + chr3.2:60377925-60377944 MS.gene061558:CDS 40.0%
ACCAATCCACCAAATCACTA+AGG - chr3.2:60376064-60376083 None:intergenic 40.0%
AGCAACACCAAAGTCAGTAT+TGG + chr3.2:60374692-60374711 MS.gene061558:CDS 40.0%
AGGCTCGTTATTAAACCTTG+TGG - chr3.2:60373981-60374000 None:intergenic 40.0%
AGTGAGGAAAATGAGCTTGT+TGG - chr3.2:60373589-60373608 None:intergenic 40.0%
ATCAGGAGGACATCAAATTC+AGG + chr3.2:60377981-60378000 MS.gene061558:CDS 40.0%
ATGTTCCATGGCTGGTAAAA+AGG - chr3.2:60373789-60373808 None:intergenic 40.0%
ATTAAACCTTGTGGCTACAG+CGG - chr3.2:60373972-60373991 None:intergenic 40.0%
CAATCACAACCAATATCAGG+AGG + chr3.2:60377967-60377986 MS.gene061558:CDS 40.0%
CATCATCATCACTCACACTA+TGG + chr3.2:60374034-60374053 MS.gene061558:CDS 40.0%
CCTCCATTAAAAACCTTCAC+TGG - chr3.2:60374299-60374318 None:intergenic 40.0%
CTCAGAGACAGTGATACTAA+TGG + chr3.2:60374260-60374279 MS.gene061558:intron 40.0%
CTGAAACCATCTATGTCGTT+TGG - chr3.2:60377934-60377953 None:intergenic 40.0%
CTGGTAAAAAGGGGAATGAA+CGG - chr3.2:60373778-60373797 None:intergenic 40.0%
GAAGGGTTAAGACCAATCAA+AGG + chr3.2:60373734-60373753 MS.gene061558:CDS 40.0%
GAGCTTAAGTACTAGTCGTT+TGG - chr3.2:60376349-60376368 None:intergenic 40.0%
GAGGATGATGTACCACAAAT+TGG + chr3.2:60375648-60375667 MS.gene061558:CDS 40.0%
GGTTGTGATTGGAAGATAGT+TGG - chr3.2:60377958-60377977 None:intergenic 40.0%
GTACCACAAATTGGAAGCAA+TGG + chr3.2:60375657-60375676 MS.gene061558:CDS 40.0%
GTGAGAGTAAGACTATTAGG+TGG + chr3.2:60374566-60374585 MS.gene061558:intron 40.0%
GTGTCATCAACATCATCAGA+AGG + chr3.2:60373716-60373735 MS.gene061558:CDS 40.0%
TAGACTGGAATCCCTTTGAT+TGG - chr3.2:60373749-60373768 None:intergenic 40.0%
TATGAATGAATGTGTGGGAG+TGG + chr3.2:60374854-60374873 MS.gene061558:intron 40.0%
TGATCAGTAGTAGAGAACCA+TGG + chr3.2:60377896-60377915 MS.gene061558:intron 40.0%
TGCACCACTTTCTTCTTCAT+TGG - chr3.2:60374829-60374848 None:intergenic 40.0%
TGTTCCATGGCTGGTAAAAA+GGG - chr3.2:60373788-60373807 None:intergenic 40.0%
! AAATGGTCATTAGTATCGGG+AGG - chr3.2:60374437-60374456 None:intergenic 40.0%
! AGTGTGAGTGATGATGATGA+TGG - chr3.2:60374033-60374052 None:intergenic 40.0%
! ATGTCGTTTGGACTTGTTTG+TGG - chr3.2:60377922-60377941 None:intergenic 40.0%
! ATTGGAACTGATGGATGTGA+AGG + chr3.2:60374710-60374729 MS.gene061558:CDS 40.0%
! CCAGTGAAGGTTTTTAATGG+AGG + chr3.2:60374296-60374315 MS.gene061558:intron 40.0%
! CTCCTGATATTGGTTGTGAT+TGG - chr3.2:60377969-60377988 None:intergenic 40.0%
! GCTCTCATGCTTCTTTTTGT+CGG - chr3.2:60374121-60374140 None:intergenic 40.0%
! GGTCCATAGTAGAGTTTGTT+AGG - chr3.2:60376654-60376673 None:intergenic 40.0%
! GGTTGTTGTTGATGTTGTTG+TGG - chr3.2:60373545-60373564 None:intergenic 40.0%
!! AAAAAAGAGTGTTGTGGACG+TGG - chr3.2:60375947-60375966 None:intergenic 40.0%
!! AAAAAGAGTGTTGTGGACGT+GGG - chr3.2:60375946-60375965 None:intergenic 40.0%
!! ACCTTAGTGATTTGGTGGAT+TGG + chr3.2:60376060-60376079 MS.gene061558:intron 40.0%
!! ATTACTCCATAGAGTGTTGG+TGG - chr3.2:60375754-60375773 None:intergenic 40.0%
AAACCTCCTGCAGCTATGTA+GGG - chr3.2:60373899-60373918 None:intergenic 45.0%
ACGGAGTTGAATTAGGCATG+TGG - chr3.2:60373847-60373866 None:intergenic 45.0%
ACTCATCCACCAACACTCTA+TGG + chr3.2:60375745-60375764 MS.gene061558:CDS 45.0%
AGTGGAGAAGAAGACGAAGA+AGG - chr3.2:60373872-60373891 None:intergenic 45.0%
ATCAGAGACTGTGTCATGTC+TGG - chr3.2:60374938-60374957 None:intergenic 45.0%
CCACAAATTGGAAGCAATGG+TGG + chr3.2:60375660-60375679 MS.gene061558:CDS 45.0%
CCACCATTGCTTCCAATTTG+TGG - chr3.2:60375663-60375682 None:intergenic 45.0%
GAAGAAGACGAAGAAGGAGA+CGG - chr3.2:60373866-60373885 None:intergenic 45.0%
GAAGGAGACGGAGTTGAATT+AGG - chr3.2:60373854-60373873 None:intergenic 45.0%
GAATTACCTGAAGAAGCTGC+AGG - chr3.2:60375262-60375281 None:intergenic 45.0%
GCTCACACTGAACTATCTCT+TGG + chr3.2:60373488-60373507 MS.gene061558:CDS 45.0%
GTACTTGTCCATCGCATTCT+TGG - chr3.2:60374145-60374164 None:intergenic 45.0%
GTTCATGCTGTTGAGCTTCT+TGG + chr3.2:60374181-60374200 MS.gene061558:CDS 45.0%
GTTCCATGGCTGGTAAAAAG+GGG - chr3.2:60373787-60373806 None:intergenic 45.0%
TAAACCTCCTGCAGCTATGT+AGG - chr3.2:60373900-60373919 None:intergenic 45.0%
TCTCTTGAATGTTCCATGGC+TGG - chr3.2:60373797-60373816 None:intergenic 45.0%
TTAGGCCTTTCAGATGGATC+TGG + chr3.2:60375624-60375643 MS.gene061558:intron 45.0%
! ATTCCCCTTTTTACCAGCCA+TGG + chr3.2:60373781-60373800 MS.gene061558:CDS 45.0%
! CACTATGGTAGTGTTGGACT+TGG + chr3.2:60374049-60374068 MS.gene061558:CDS 45.0%
! CACTCACACTATGGTAGTGT+TGG + chr3.2:60374043-60374062 MS.gene061558:CDS 45.0%
! GACAGTGATACTAATGGACC+AGG + chr3.2:60374266-60374285 MS.gene061558:intron 45.0%
! GTTGGATTAGGCCTTTCAGA+TGG + chr3.2:60375618-60375637 MS.gene061558:intron 45.0%
! TTTGGACTTGTTTGTGGCCA+TGG - chr3.2:60377916-60377935 None:intergenic 45.0%
!! GTAAACATTAGTGGTGGTGG+AGG + chr3.2:60377420-60377439 MS.gene061558:intron 45.0%
!! GTGAGTGATGATGATGATGG+TGG - chr3.2:60374030-60374049 None:intergenic 45.0%
!! TGATGATGATGGTGGTGCAA+TGG - chr3.2:60374022-60374041 None:intergenic 45.0%
!!! AAAAAAATTGTATTTAATTT+AGG + chr3.2:60378051-60378070 MS.gene061558:intron 5.0%
!!! AATTAAATACAATTTTTTTT+TGG - chr3.2:60378050-60378069 None:intergenic 5.0%
AACCTCCTGCAGCTATGTAG+GGG - chr3.2:60373898-60373917 None:intergenic 50.0%
ACCAGGATTCTCTCCAGTGA+AGG + chr3.2:60374283-60374302 MS.gene061558:intron 50.0%
ACCTTCACTGGAGAGAATCC+TGG - chr3.2:60374287-60374306 None:intergenic 50.0%
ACCTTTGGACCATTCCTTGG+GGG + chr3.2:60376723-60376742 MS.gene061558:intron 50.0%
CACCTTTGGACCATTCCTTG+GGG + chr3.2:60376722-60376741 MS.gene061558:intron 50.0%
CATGCTGTTGAGCTTCTTGG+TGG + chr3.2:60374184-60374203 MS.gene061558:CDS 50.0%
CCACCTTTGGACCATTCCTT+GGG + chr3.2:60376721-60376740 MS.gene061558:intron 50.0%
CCTCTCCAGATCCATCTGAA+AGG - chr3.2:60375632-60375651 None:intergenic 50.0%
CCTTTCAGATGGATCTGGAG+AGG + chr3.2:60375629-60375648 MS.gene061558:CDS 50.0%
GAATCCAAACCCCCAAGGAA+TGG - chr3.2:60376735-60376754 None:intergenic 50.0%
GACAAACCTGCAGCTTCTTC+AGG + chr3.2:60375253-60375272 MS.gene061558:CDS 50.0%
GGAACGGCAGAGATTAACAC+TGG - chr3.2:60374326-60374345 None:intergenic 50.0%
TCCACCTTTGGACCATTCCT+TGG + chr3.2:60376720-60376739 MS.gene061558:intron 50.0%
! AAACTCAAGTGGCTCTACGG+CGG + chr3.2:60373937-60373956 MS.gene061558:CDS 50.0%
!! ATGAGTGGACTGGATTCCAC+TGG + chr3.2:60374386-60374405 MS.gene061558:intron 50.0%
!! TGAGAGCACCAAGAATGCGA+TGG + chr3.2:60374134-60374153 MS.gene061558:CDS 50.0%
ACCCCCAAGGAATGGTCCAA+AGG - chr3.2:60376727-60376746 None:intergenic 55.0%
ACCTCCTGCAGCTATGTAGG+GGG - chr3.2:60373897-60373916 None:intergenic 55.0%
CCCAAGGAATGGTCCAAAGG+TGG - chr3.2:60376724-60376743 None:intergenic 55.0%
CTTTCCCCCTACATAGCTGC+AGG + chr3.2:60373890-60373909 MS.gene061558:CDS 55.0%
GCAGCTATGTAGGGGGAAAG+TGG - chr3.2:60373890-60373909 None:intergenic 55.0%
TGGACCATTCCTTGGGGGTT+TGG + chr3.2:60376728-60376747 MS.gene061558:intron 55.0%
TGGGTGAATCCAAACCCCCA+AGG - chr3.2:60376740-60376759 None:intergenic 55.0%
TGGTGGAGGCTTACCATGCA+AGG + chr3.2:60377434-60377453 MS.gene061558:intron 55.0%
!! GTGGACTGGATTCCACTGGA+CGG + chr3.2:60374390-60374409 MS.gene061558:intron 55.0%
ATCGAGCCGCTGTAGCCACA+AGG + chr3.2:60373963-60373982 MS.gene061558:CDS 60.0%
TCCCCCTACATAGCTGCAGG+AGG + chr3.2:60373893-60373912 MS.gene061558:CDS 60.0%
CCACTGGACGGTGCAGTGAC+AGG + chr3.2:60374402-60374421 MS.gene061558:intron 65.0%
CCTGTCACTGCACCGTCCAG+TGG - chr3.2:60374405-60374424 None:intergenic 65.0%
GGACGGTGCAGTGACAGGAG+AGG + chr3.2:60374407-60374426 MS.gene061558:intron 65.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 60373317 60378078 60373317 ID=MS.gene061558
chr3.2 mRNA 60373317 60378078 60373317 ID=MS.gene061558.t1;Parent=MS.gene061558
chr3.2 exon 60373317 60374214 60373317 ID=MS.gene061558.t1.exon1;Parent=MS.gene061558.t1
chr3.2 CDS 60373317 60374214 60373317 ID=cds.MS.gene061558.t1;Parent=MS.gene061558.t1
chr3.2 exon 60374691 60374767 60374691 ID=MS.gene061558.t1.exon2;Parent=MS.gene061558.t1
chr3.2 CDS 60374691 60374767 60374691 ID=cds.MS.gene061558.t1;Parent=MS.gene061558.t1
chr3.2 exon 60375229 60375274 60375229 ID=MS.gene061558.t1.exon3;Parent=MS.gene061558.t1
chr3.2 CDS 60375229 60375274 60375229 ID=cds.MS.gene061558.t1;Parent=MS.gene061558.t1
chr3.2 exon 60375628 60375781 60375628 ID=MS.gene061558.t1.exon4;Parent=MS.gene061558.t1
chr3.2 CDS 60375628 60375781 60375628 ID=cds.MS.gene061558.t1;Parent=MS.gene061558.t1
chr3.2 exon 60377903 60378002 60377903 ID=MS.gene061558.t1.exon5;Parent=MS.gene061558.t1
chr3.2 CDS 60377903 60378002 60377903 ID=cds.MS.gene061558.t1;Parent=MS.gene061558.t1
chr3.2 exon 60378073 60378078 60378073 ID=MS.gene061558.t1.exon6;Parent=MS.gene061558.t1
chr3.2 CDS 60378073 60378078 60378073 ID=cds.MS.gene061558.t1;Parent=MS.gene061558.t1
Gene Sequence

>MS.gene061558

ATGCCCTTGGAAGGGATTTTCATTGAACCAATTTCAACATCAACAACACCACCTGATCTTTCTCTTCATATAAGTCCTCCAAGTACTTCTAATTCTTCTTTGATTAACACAACTCAACCATCCAATTATGAACCTCATAATTCTTCAAGAACAACTTTGGCTCAAGCTCAAGCTCACACTGAACTATCTCTTGGAAGAAATTTTAGTTGTGGTGCTCAAGAACAACCACAACAACATCAACAACAACCACATAACCCTTATTATCAAAACCAACAAGCTCATTTTCCTCACTTTCAACATCACAACAATCACAACTCTACAACAACAACAACAACAAATACTACAACAAATTCTTCAAGTCACATGAATCACATAAATTATGGTGTTTCATTGCTTGATGTGTCATCAACATCATCAGAAGGGTTAAGACCAATCAAAGGGATTCCAGTCTATCACAACCGTTCATTCCCCTTTTTACCAGCCATGGAACATTCAAGAGAAAAAGATCCAAAGATGTGTTTATATCACCACATGCCTAATTCAACTCCGTCTCCTTCTTCGTCTTCTTCTCCACTTTCCCCCTACATAGCTGCAGGAGGTTTAGATCCCATGTCGTTTTTAAACTCAAGTGGCTCTACGGCGGCTTATCGAGCCGCTGTAGCCACAAGGTTTAATAACGAGCCTTTCAAATCTCATCAATATCCATTGCACCACCATCATCATCATCACTCACACTATGGTAGTGTTGGACTTGGTAGCTCAGAAGCATCCATGATGAGATCAAGGTTTTTGCCTAAATTGCCGACAAAAAGAAGCATGAGAGCACCAAGAATGCGATGGACAAGTACTCTTCATGCTAGATTTGTTCATGCTGTTGAGCTTCTTGGTGGCCATGAAAGTAAACATTTTTCTCTTCCACTTTAATTTTCTTCTTTTAAATTTTCTCAGAGACAGTGATACTAATGGACCAGGATTCTCTCCAGTGAAGGTTTTTAATGGAGGGTGTCCAGTGTTAATCTCTGCCGTTCCTTTTGTTTTCAATTATTAAATATGCAATTAATAAACAAAGATGAGTGGACTGGATTCCACTGGACGGTGCAGTGACAGGAGAGGATCTCCTCCCGATACTAATGACCATTTTACACCTGTATCAAATTTGATCTTCGTCTTTTGAGATTACAAATTTTTTATAAGTAATTAAATTTCTTTTAATGAAATAAAAAGAAAGAGTGTTGTTTACTTGTTACTTGTGAGAGTAAGACTATTAGGTGGGTGTTATGTTAAATATTTAGTATTTTATTTTATTGTTGTTGTTAATATGTTTGGTGTTATAGATAGGTGTTTGGCTAATGTGATTTAGATGGTGAATTTTAGGAGCAACACCAAAGTCAGTATTGGAACTGATGGATGTGAAGGATCTCACATTAGCTCATGTAAAAAGCCATTTGCAGGTATGTATTGTATGTATCTATCTACTATATGAAATTGAAATGAAATTGGGCACAATAGCCAATGAAGAAGAAAGTGGTGCAGTGAATATGAATGAATGTGTGGGAGTGGATAGTAGTAGTAGTAATTAAGTAGTAAGCTAAGAAGGAGACTTTATCATCTGAGACGACCAGACATGACACAGTCTCTGATTATAGTCATAGAAAGAGAGAGAAAACTGACAACAACAAATAAAAGTCATCATTTTCCAATAATGCAACAATCTCTCATTTACAACCTTATTATCAAACATCAACCTCGTGATTAATGCATATTTTATAGTACTTTTATATAACTTATTCAATACAAATAGGTTTATTTTTTATATATATATTTTCATACTAATTTCTTGTGTTGAAATTGTGGAAATATCTTTGTAATTAGTATAAAATGTTTGTTTTGTTTTGTGATTTGTTCTTCACAGATGTATCGAACTGTTAAGACAACTGACAAACCTGCAGCTTCTTCAGGTAATTCGTATTGCTCAATCTTCAACCATTTTTTTTCCCTTAATTAGTCTAATAATTACGGATGTATTAATTTCTCTTGTTTTTATAGAGAATGTCATCACTTGTGAGTTGTGACTTACTACCTTATTCTTTTCACATTTTTTTTACTGTTATTTTTTCTACCTTTAAAGTCTATATATGTGAACACTTTTGAGGCTTTTTGCCTCTTAAACATATATATAAAAGTTCCACCTTAATTACCTTGCTTAAATTTTATATATATAAAATTATGAAGCTAGATGTGTGCATGCATGTACTTTACATTAATTAATAAATTTATTTTTGGAGTAATTATAAATTAACTGTTGGATTAGGCCTTTCAGATGGATCTGGAGAGGATGATGTACCACAAATTGGAAGCAATGGTGGAATTCGTCAATTTTCAGATCAAAGAGGGATAACAGATAGACCATTACAGCAAGATATGGATTACTCATCCACCAACACTCTATGGAGTAATTCTTCAAGGTAACATTATTTTTCAATGTTACTATTTTTCTAAATTTTGAAGTACATATGTTTTATGTGCTTATATAGATGTACATATTTAATTATTTTTTTTGTCACCGACTTTGTTTATTTACTTTTGCTTTTGCATGGAGTATCTCTTGTATAAAAATCAATGCAAACCCACGTCCACAACACTCTTTTTTATGAAGAATAAAAAGGGTTCTTGTGGCAGCTTTTGCTTTAAACTTGTGTGTTTCATTTTCTTCTTTCTTTTCTTTCCTTTGTATATCTTTTGTACCTTAGTGATTTGGTGGATTGGTGAATTCATATAACAAAAGAATGCTACAAGACATAATCGAATGCTAATTCGTTAGGATAAAAGGAAAGCAACACAAAGCTTCAGTAATTTGCTTTTTTTTTTCTTTCTTCTTCCTTTGACTTGTGTGTATGTTTGTCTCCTAATATTACAAATTTCAAGGCTAATTATTTGATCATAACCCGAATATTGATATGGATCTTGATTTCTGCACCTGTAGATTACATAAAACCCAAATGACTCACTCTAAAAAAAAAAAAAAAAACCCAAACGACTAGTACTTAAGCTCTTCGTATATTGACCATGTATTCTTCCAAGTAACATTAACAAATTATTTAGAAATATATAGTATCACTCAATTTGTTTTTATAAGTTGGTTTGCACAAATCAAGAAATAGTGGTAACTAAATACTATAAACAGATTTCAATTATAGTGTTACATTTCATTGGTTCACTCTAGTAAGTCTAAAATAGTTGTAAGTTGACAATATAATCTGGAAAAAAATATATAGTTAATGTAACATAGAAATTTAGAATTGGTAAATAAAAAAAAATATTTTTCATTATAAAACCTAACAAACTCTACTATGGACCTCTAAAAAAATAGTCTAGAGGTAAATCCTTAGTATTTTTTTAAGGATCCACCTTTGGACCATTCCTTGGGGGTTTGGATTCACCCATGAAATTATTACCATATGTTGTATTTAGAAATGTGCACCCTTTACTTAAATTTTCACTTTCAATGTTTTTTCTTTGCTTGTTATAATGTAAATGCGAACTCTTGACTTAAATTACACGAATTATATTAGAATAACCATGTGAAATTATTGATGAGGTCGTTATTTTCTATCAAAAAATAAAAGCAAAAGATTGATTTAGATTCAATGGGGGTTTAATTGACCCTCTTGCACCTAAATTTTAATTAATTTGAGTTAGCCTGTAAACCTTCTTTATTTTGTTTTTGATAAACATAAACAAATCTTCTTGATTTAATTTTTTGTCTTTGAGCTACTTTATGTAAAAATCATACTTATAGTTAACTATTTTGATGTTGACACTCGACATTCTCTGCAATAATCTAAATTCATATGTCCAGTTCTACCTTTATAGTATTCAAGATATTTTAAAAATTGAGAGGCATGTCTTTCTCTTATTAGGTAATATCTTGATATAAATATATATATTAAAACTTATAGAGTAACACCTATTAACTACTGTCTGTCATTTTTAGTCTAAAAAAAATATTCTACTGTTTGTCATGATTAAAAAAACATTACCTTAAGTGAACATGAAATATCTCATTGTGACACAAACAAATTATCACTACAAAGTCTCATTAAGTAAACATTAGTGGTGGTGGAGGCTTACCATGCAAGGCTCATAATAGTAAGTTTGGAATTATATTTGAGTGTAATTGGCATTTTGGCATGTGACTTGCCTATCAATGTATCATCCATAAGTGTTTGTTTTTCATTTAGTATACTGTATATCATATACTTGAATCAGTGCTTACATGTATAGTTGTAATACATAGCCTTAGGATTGGTTTAAGTGCTACATTTAATCCATCAAGAGCATCTCCAATTATTGGAAAAATAGTATTCTACATTGGAAAAGTGATAAAGACTGAAAAAAGTTTATAAATTCTGGAGTGTGATCGTACTTGAATTGTATCTATACTAAAGACATAGATGTATAGTGAAGTTTTGCACACTGCCATCAACAAAACAGTTCATGCATGTTTGGTATACATAAAGAATCCATTGAACTGATGCAATTTTTTTCTTGGTTGTGTCATTTCATCTTAATTAAATTATGATCAGTAGTAGAGAACCATGGCCACAAACAAGTCCAAACGACATAGATGGTTTCAGACCAACTATCTTCCAATCACAACCAATATCAGGAGGACATCAAATTCAGGTATAACTAATGAGTTTAATATATTTGTTATCATTAATTTGTAACCAAAAAAAAATTGTATTTAATTTAGGCTTAA
Protein sequence

>MS.gene061558.t1

MPLEGIFIEPISTSTTPPDLSLHISPPSTSNSSLINTTQPSNYEPHNSSRTTLAQAQAHTELSLGRNFSCGAQEQPQQHQQQPHNPYYQNQQAHFPHFQHHNNHNSTTTTTTNTTTNSSSHMNHINYGVSLLDVSSTSSEGLRPIKGIPVYHNRSFPFLPAMEHSREKDPKMCLYHHMPNSTPSPSSSSSPLSPYIAAGGLDPMSFLNSSGSTAAYRAAVATRFNNEPFKSHQYPLHHHHHHHSHYGSVGLGSSEASMMRSRFLPKLPTKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGLSDGSGEDDVPQIGSNGGIRQFSDQRGITDRPLQQDMDYSSTNTLWSNSSSSREPWPQTSPNDIDGFRPTIFQSQPISGGHQIQA