Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061587.t1 | AET04632.2 | 47.6 | 395 | 167 | 6 | 2 | 395 | 26 | 381 | 1.90E-27 | 133.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061587.t1 | G7LC73 | 47.6 | 395 | 167 | 6 | 2 | 395 | 26 | 381 | 1.4e-27 | 133.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049674 | MS.gene061587 | 0.807288 | 5.44E-50 | -1.69E-46 |
MS.gene05035 | MS.gene061587 | 0.901567 | 2.35E-78 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061587.t1 | MTR_8g095240 | 81.690 | 426 | 46 | 4 | 1 | 395 | 1 | 425 | 0.0 | 642 |
MS.gene061587.t1 | MTR_8g092410 | 48.705 | 386 | 147 | 8 | 40 | 395 | 17 | 381 | 1.76e-94 | 288 |
MS.gene061587.t1 | MTR_8g092410 | 40.152 | 132 | 51 | 2 | 26 | 129 | 129 | 260 | 1.73e-15 | 77.8 |
MS.gene061587.t1 | MTR_4g107460 | 49.096 | 332 | 108 | 7 | 8 | 337 | 13 | 285 | 1.02e-79 | 249 |
MS.gene061587.t1 | MTR_4g107460 | 44.000 | 125 | 46 | 1 | 5 | 129 | 126 | 226 | 4.05e-19 | 88.2 |
MS.gene061587.t1 | MTR_8g092090 | 58.367 | 245 | 87 | 4 | 73 | 308 | 8 | 246 | 1.79e-79 | 245 |
MS.gene061587.t1 | MTR_8g092090 | 53.815 | 249 | 93 | 4 | 1 | 249 | 6 | 232 | 5.60e-75 | 233 |
MS.gene061587.t1 | MTR_8g080860 | 53.101 | 258 | 114 | 3 | 3 | 260 | 19 | 269 | 4.68e-75 | 235 |
MS.gene061587.t1 | MTR_8g080860 | 52.713 | 258 | 116 | 2 | 51 | 308 | 20 | 271 | 2.00e-73 | 231 |
MS.gene061587.t1 | MTR_8g080860 | 48.500 | 200 | 96 | 3 | 1 | 200 | 63 | 255 | 1.25e-49 | 169 |
MS.gene061587.t1 | MTR_8g080860 | 46.108 | 167 | 84 | 2 | 1 | 167 | 109 | 269 | 1.40e-33 | 127 |
MS.gene061587.t1 | MTR_8g080860 | 53.101 | 258 | 114 | 3 | 3 | 260 | 15 | 265 | 5.71e-75 | 234 |
MS.gene061587.t1 | MTR_8g080860 | 52.713 | 258 | 116 | 2 | 51 | 308 | 16 | 267 | 2.03e-73 | 231 |
MS.gene061587.t1 | MTR_8g080860 | 48.500 | 200 | 96 | 3 | 1 | 200 | 59 | 251 | 1.40e-49 | 169 |
MS.gene061587.t1 | MTR_8g080860 | 46.108 | 167 | 84 | 2 | 1 | 167 | 105 | 265 | 1.62e-33 | 126 |
MS.gene061587.t1 | MTR_6g043150 | 38.154 | 325 | 171 | 4 | 3 | 304 | 9 | 326 | 1.12e-51 | 176 |
MS.gene061587.t1 | MTR_6g043150 | 31.330 | 233 | 130 | 3 | 93 | 324 | 6 | 209 | 2.77e-24 | 102 |
MS.gene061587.t1 | MTR_6g043150 | 33.168 | 202 | 108 | 2 | 1 | 180 | 122 | 318 | 1.23e-19 | 89.4 |
MS.gene061587.t1 | MTR_8g080310 | 56.522 | 161 | 64 | 2 | 90 | 250 | 3 | 157 | 9.84e-47 | 157 |
MS.gene061587.t1 | MTR_8g080310 | 49.689 | 161 | 75 | 2 | 43 | 203 | 2 | 156 | 3.47e-37 | 132 |
MS.gene061587.t1 | MTR_8g080310 | 46.497 | 157 | 78 | 2 | 1 | 157 | 7 | 157 | 2.04e-33 | 122 |
MS.gene061587.t1 | MTR_8g080310 | 41.497 | 147 | 63 | 1 | 187 | 310 | 2 | 148 | 2.11e-23 | 95.9 |
MS.gene061587.t1 | MTR_2g078470 | 36.111 | 288 | 177 | 3 | 4 | 291 | 79 | 359 | 1.95e-45 | 160 |
MS.gene061587.t1 | MTR_2g078470 | 35.882 | 340 | 182 | 6 | 3 | 318 | 9 | 336 | 2.73e-45 | 160 |
MS.gene061587.t1 | MTR_2g078470 | 39.286 | 224 | 127 | 4 | 4 | 226 | 148 | 363 | 2.19e-35 | 134 |
MS.gene061587.t1 | MTR_8g088930 | 48.876 | 178 | 85 | 2 | 3 | 180 | 12 | 183 | 7.16e-44 | 162 |
MS.gene061587.t1 | MTR_8g088930 | 34.203 | 345 | 170 | 10 | 89 | 387 | 4 | 337 | 1.22e-40 | 152 |
MS.gene061587.t1 | MTR_8g088930 | 48.876 | 178 | 85 | 2 | 3 | 180 | 12 | 183 | 7.24e-44 | 162 |
MS.gene061587.t1 | MTR_8g088930 | 34.493 | 345 | 169 | 10 | 89 | 387 | 4 | 337 | 1.15e-40 | 153 |
MS.gene061587.t1 | MTR_8g088930 | 50.289 | 173 | 80 | 2 | 8 | 180 | 17 | 183 | 1.05e-43 | 162 |
MS.gene061587.t1 | MTR_8g088930 | 34.203 | 345 | 170 | 10 | 89 | 387 | 4 | 337 | 3.64e-40 | 152 |
MS.gene061587.t1 | MTR_8g088930 | 50.289 | 173 | 80 | 2 | 8 | 180 | 17 | 183 | 1.13e-43 | 162 |
MS.gene061587.t1 | MTR_8g088930 | 34.203 | 345 | 170 | 10 | 89 | 387 | 4 | 337 | 4.39e-40 | 152 |
MS.gene061587.t1 | MTR_5g010840 | 36.735 | 294 | 147 | 6 | 2 | 294 | 109 | 364 | 5.71e-42 | 152 |
MS.gene061587.t1 | MTR_5g010840 | 27.426 | 237 | 135 | 2 | 74 | 310 | 112 | 311 | 6.64e-15 | 76.3 |
MS.gene061587.t1 | MTR_8g080340 | 47.826 | 161 | 55 | 3 | 7 | 167 | 22 | 153 | 1.17e-35 | 129 |
MS.gene061587.t1 | MTR_8g080340 | 50.806 | 124 | 55 | 2 | 77 | 200 | 22 | 139 | 1.93e-28 | 109 |
MS.gene061587.t1 | MTR_8g080340 | 43.312 | 157 | 65 | 1 | 152 | 308 | 23 | 155 | 1.47e-27 | 107 |
MS.gene061587.t1 | MTR_8g080350 | 35.088 | 228 | 104 | 5 | 3 | 192 | 125 | 346 | 1.46e-29 | 118 |
MS.gene061587.t1 | MTR_8g080350 | 29.811 | 265 | 99 | 9 | 79 | 273 | 87 | 334 | 5.73e-19 | 88.2 |
MS.gene061587.t1 | MTR_8g080350 | 56.410 | 78 | 34 | 0 | 233 | 310 | 95 | 172 | 4.63e-18 | 85.5 |
MS.gene061587.t1 | MTR_8g080350 | 39.416 | 137 | 60 | 2 | 196 | 309 | 104 | 240 | 6.78e-18 | 85.1 |
MS.gene061587.t1 | MTR_1g062740 | 28.496 | 379 | 215 | 11 | 9 | 380 | 56 | 385 | 6.38e-27 | 113 |
MS.gene061587.t1 | MTR_1g062740 | 32.530 | 166 | 104 | 3 | 97 | 261 | 51 | 209 | 5.99e-17 | 83.2 |
MS.gene061587.t1 | MTR_1g062740 | 35.772 | 123 | 78 | 1 | 8 | 130 | 101 | 222 | 1.27e-13 | 73.2 |
MS.gene061587.t1 | MTR_3g097260 | 40.462 | 173 | 97 | 2 | 8 | 180 | 59 | 225 | 1.74e-26 | 112 |
MS.gene061587.t1 | MTR_3g097260 | 29.130 | 230 | 140 | 7 | 97 | 322 | 55 | 265 | 3.64e-11 | 65.5 |
MS.gene061587.t1 | MTR_8g039100 | 37.791 | 172 | 101 | 2 | 9 | 180 | 58 | 223 | 2.09e-26 | 111 |
MS.gene061587.t1 | MTR_8g039100 | 34.839 | 155 | 92 | 2 | 7 | 153 | 102 | 255 | 4.06e-17 | 84.0 |
MS.gene061587.t1 | MTR_8g039100 | 31.250 | 192 | 126 | 2 | 98 | 289 | 54 | 239 | 4.10e-17 | 84.0 |
MS.gene061587.t1 | MTR_3g023310 | 46.715 | 137 | 54 | 3 | 110 | 246 | 9 | 126 | 1.37e-25 | 102 |
MS.gene061587.t1 | MTR_3g023310 | 42.384 | 151 | 46 | 5 | 61 | 200 | 6 | 126 | 8.92e-21 | 89.4 |
MS.gene061587.t1 | MTR_3g023310 | 43.704 | 135 | 57 | 3 | 19 | 153 | 11 | 126 | 1.63e-19 | 85.9 |
MS.gene061587.t1 | MTR_3g023310 | 41.964 | 112 | 51 | 1 | 162 | 273 | 10 | 107 | 6.86e-15 | 72.8 |
MS.gene061587.t1 | MTR_5g058920 | 32.955 | 264 | 117 | 5 | 35 | 290 | 174 | 385 | 5.92e-24 | 103 |
MS.gene061587.t1 | MTR_5g058920 | 40.496 | 121 | 71 | 1 | 9 | 129 | 248 | 367 | 1.36e-15 | 78.6 |
MS.gene061587.t1 | MTR_5g058920 | 32.796 | 186 | 95 | 4 | 2 | 163 | 195 | 374 | 3.07e-15 | 77.4 |
MS.gene061587.t1 | MTR_3g014650 | 38.776 | 147 | 85 | 1 | 34 | 180 | 106 | 247 | 8.44e-23 | 100 |
MS.gene061587.t1 | MTR_3g014650 | 35.032 | 157 | 86 | 3 | 7 | 153 | 126 | 276 | 4.28e-18 | 86.7 |
MS.gene061587.t1 | MTR_3g014650 | 30.994 | 171 | 112 | 2 | 15 | 185 | 111 | 275 | 3.73e-16 | 80.9 |
MS.gene061587.t1 | MTR_3g014650 | 27.885 | 208 | 132 | 3 | 94 | 301 | 86 | 275 | 5.59e-14 | 74.3 |
MS.gene061587.t1 | MTR_3g014650 | 29.189 | 185 | 113 | 3 | 51 | 235 | 89 | 255 | 8.06e-14 | 73.6 |
MS.gene061587.t1 | MTR_3g073100 | 38.372 | 172 | 99 | 3 | 9 | 179 | 62 | 227 | 1.39e-22 | 100 |
MS.gene061587.t1 | MTR_3g073100 | 29.864 | 221 | 101 | 5 | 51 | 246 | 57 | 248 | 7.79e-16 | 79.7 |
MS.gene061587.t1 | MTR_3g073100 | 34.161 | 161 | 99 | 3 | 3 | 162 | 80 | 234 | 5.29e-14 | 74.3 |
MS.gene061587.t1 | MTR_8g007500 | 33.871 | 186 | 117 | 2 | 93 | 278 | 193 | 372 | 3.85e-22 | 98.2 |
MS.gene061587.t1 | MTR_8g007500 | 34.807 | 181 | 112 | 2 | 53 | 233 | 199 | 373 | 1.21e-19 | 90.9 |
MS.gene061587.t1 | MTR_8g007500 | 31.720 | 186 | 121 | 2 | 2 | 187 | 195 | 374 | 2.39e-19 | 89.7 |
MS.gene061587.t1 | MTR_8g007500 | 29.648 | 199 | 107 | 4 | 116 | 313 | 193 | 359 | 3.32e-11 | 65.1 |
MS.gene061587.t1 | MTR_5g459450 | 36.364 | 165 | 99 | 2 | 9 | 173 | 74 | 232 | 8.88e-22 | 97.8 |
MS.gene061587.t1 | MTR_5g459450 | 26.636 | 214 | 105 | 3 | 49 | 262 | 67 | 228 | 2.68e-12 | 68.9 |
MS.gene061587.t1 | MTR_1g050740 | 31.718 | 227 | 102 | 4 | 9 | 235 | 66 | 239 | 9.94e-22 | 97.8 |
MS.gene061587.t1 | MTR_1g050740 | 27.731 | 238 | 154 | 5 | 76 | 301 | 32 | 263 | 1.13e-16 | 82.4 |
MS.gene061587.t1 | MTR_1g050740 | 31.395 | 172 | 112 | 2 | 2 | 173 | 82 | 247 | 5.28e-16 | 80.5 |
MS.gene061587.t1 | MTR_7g451440 | 31.980 | 197 | 126 | 3 | 84 | 278 | 177 | 367 | 1.46e-21 | 96.3 |
MS.gene061587.t1 | MTR_7g451440 | 34.615 | 182 | 111 | 4 | 53 | 233 | 194 | 368 | 2.42e-20 | 92.8 |
MS.gene061587.t1 | MTR_7g451440 | 31.667 | 180 | 117 | 2 | 8 | 187 | 196 | 369 | 2.73e-19 | 89.7 |
MS.gene061587.t1 | MTR_7g451440 | 28.910 | 211 | 110 | 4 | 103 | 313 | 184 | 354 | 6.41e-13 | 70.5 |
MS.gene061587.t1 | MTR_3g072650 | 34.637 | 179 | 111 | 3 | 2 | 180 | 183 | 355 | 2.62e-21 | 95.1 |
MS.gene061587.t1 | MTR_3g072650 | 31.720 | 186 | 121 | 2 | 87 | 272 | 175 | 354 | 1.89e-19 | 89.7 |
MS.gene061587.t1 | MTR_3g072650 | 32.609 | 184 | 118 | 2 | 38 | 221 | 172 | 349 | 4.79e-19 | 88.6 |
MS.gene061587.t1 | MTR_3g072650 | 34.637 | 179 | 111 | 3 | 2 | 180 | 183 | 355 | 3.29e-21 | 95.1 |
MS.gene061587.t1 | MTR_3g072650 | 31.892 | 185 | 120 | 2 | 87 | 271 | 175 | 353 | 1.60e-19 | 90.1 |
MS.gene061587.t1 | MTR_3g072650 | 32.609 | 184 | 118 | 2 | 38 | 221 | 172 | 349 | 6.41e-19 | 88.6 |
MS.gene061587.t1 | MTR_8g095170 | 34.682 | 173 | 107 | 2 | 15 | 187 | 42 | 208 | 1.35e-20 | 94.0 |
MS.gene061587.t1 | MTR_8g095170 | 37.013 | 154 | 90 | 3 | 2 | 155 | 52 | 198 | 1.34e-15 | 79.0 |
MS.gene061587.t1 | MTR_8g095170 | 31.667 | 180 | 108 | 6 | 95 | 269 | 28 | 197 | 1.39e-14 | 75.9 |
MS.gene061587.t1 | MTR_8g095170 | 34.682 | 173 | 107 | 2 | 15 | 187 | 42 | 208 | 1.63e-20 | 94.0 |
MS.gene061587.t1 | MTR_8g095170 | 36.986 | 146 | 86 | 2 | 2 | 147 | 52 | 191 | 1.98e-15 | 78.6 |
MS.gene061587.t1 | MTR_8g095170 | 31.667 | 180 | 108 | 6 | 95 | 269 | 28 | 197 | 2.22e-14 | 75.1 |
MS.gene061587.t1 | MTR_7g089950 | 36.216 | 185 | 106 | 3 | 2 | 180 | 63 | 241 | 5.72e-20 | 92.4 |
MS.gene061587.t1 | MTR_7g089950 | 27.811 | 169 | 93 | 2 | 97 | 265 | 71 | 210 | 5.51e-11 | 64.7 |
MS.gene061587.t1 | MTR_4g099180 | 29.798 | 198 | 133 | 2 | 93 | 290 | 168 | 359 | 2.05e-19 | 89.7 |
MS.gene061587.t1 | MTR_4g099180 | 31.183 | 186 | 122 | 2 | 1 | 186 | 169 | 348 | 1.47e-18 | 87.4 |
MS.gene061587.t1 | MTR_4g099180 | 30.088 | 226 | 118 | 5 | 31 | 255 | 161 | 347 | 2.15e-18 | 86.7 |
MS.gene061587.t1 | MTR_4g099180 | 27.778 | 198 | 112 | 3 | 116 | 313 | 168 | 334 | 2.70e-11 | 65.1 |
MS.gene061587.t1 | MTR_4g099180 | 33.571 | 140 | 77 | 4 | 31 | 169 | 161 | 285 | 2.72e-11 | 64.7 |
MS.gene061587.t1 | MTR_4g099180 | 33.571 | 140 | 77 | 4 | 31 | 169 | 161 | 285 | 3.56e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061587.t1 | AT1G60890 | 31.937 | 382 | 197 | 7 | 2 | 375 | 21 | 347 | 1.06e-43 | 162 |
MS.gene061587.t1 | AT1G60890 | 31.937 | 382 | 197 | 7 | 2 | 375 | 9 | 335 | 1.26e-43 | 162 |
MS.gene061587.t1 | AT1G10900 | 32.514 | 366 | 179 | 9 | 9 | 370 | 16 | 317 | 1.34e-36 | 142 |
MS.gene061587.t1 | AT1G10900 | 32.639 | 144 | 68 | 3 | 1 | 144 | 77 | 191 | 3.64e-13 | 71.6 |
MS.gene061587.t1 | AT1G10900 | 32.514 | 366 | 179 | 9 | 9 | 370 | 16 | 317 | 1.34e-36 | 142 |
MS.gene061587.t1 | AT1G10900 | 32.639 | 144 | 68 | 3 | 1 | 144 | 77 | 191 | 3.64e-13 | 71.6 |
MS.gene061587.t1 | AT1G10900 | 32.514 | 366 | 179 | 9 | 9 | 370 | 16 | 317 | 1.34e-36 | 142 |
MS.gene061587.t1 | AT1G10900 | 32.639 | 144 | 68 | 3 | 1 | 144 | 77 | 191 | 3.64e-13 | 71.6 |
MS.gene061587.t1 | AT1G21980 | 37.634 | 186 | 108 | 3 | 8 | 193 | 80 | 257 | 3.98e-28 | 117 |
MS.gene061587.t1 | AT1G21980 | 33.684 | 190 | 114 | 5 | 2 | 188 | 97 | 277 | 6.29e-18 | 86.3 |
MS.gene061587.t1 | AT1G21980 | 30.435 | 207 | 129 | 3 | 51 | 257 | 76 | 267 | 1.23e-16 | 82.4 |
MS.gene061587.t1 | AT1G21980 | 28.000 | 200 | 115 | 2 | 97 | 296 | 76 | 246 | 1.83e-13 | 72.4 |
MS.gene061587.t1 | AT1G77740 | 36.559 | 186 | 111 | 3 | 8 | 193 | 81 | 259 | 2.92e-26 | 111 |
MS.gene061587.t1 | AT1G77740 | 35.897 | 156 | 94 | 2 | 2 | 157 | 98 | 247 | 7.32e-19 | 89.4 |
MS.gene061587.t1 | AT1G77740 | 36.559 | 186 | 111 | 3 | 8 | 193 | 81 | 259 | 2.92e-26 | 111 |
MS.gene061587.t1 | AT1G77740 | 35.897 | 156 | 94 | 2 | 2 | 157 | 98 | 247 | 7.32e-19 | 89.4 |
MS.gene061587.t1 | AT3G09920 | 35.071 | 211 | 128 | 5 | 1 | 209 | 50 | 253 | 5.42e-25 | 107 |
MS.gene061587.t1 | AT3G09920 | 33.529 | 170 | 105 | 3 | 97 | 265 | 53 | 215 | 9.96e-18 | 85.9 |
MS.gene061587.t1 | AT3G09920 | 35.071 | 211 | 128 | 5 | 1 | 209 | 50 | 253 | 5.42e-25 | 107 |
MS.gene061587.t1 | AT3G09920 | 33.529 | 170 | 105 | 3 | 97 | 265 | 53 | 215 | 9.96e-18 | 85.9 |
MS.gene061587.t1 | AT3G09920 | 35.071 | 211 | 128 | 5 | 1 | 209 | 50 | 253 | 5.42e-25 | 107 |
MS.gene061587.t1 | AT3G09920 | 33.529 | 170 | 105 | 3 | 97 | 265 | 53 | 215 | 9.96e-18 | 85.9 |
MS.gene061587.t1 | AT3G09920 | 35.071 | 211 | 128 | 5 | 1 | 209 | 50 | 253 | 5.42e-25 | 107 |
MS.gene061587.t1 | AT3G09920 | 33.529 | 170 | 105 | 3 | 97 | 265 | 53 | 215 | 9.96e-18 | 85.9 |
MS.gene061587.t1 | AT3G07960 | 34.375 | 192 | 120 | 2 | 9 | 200 | 32 | 217 | 1.09e-23 | 103 |
MS.gene061587.t1 | AT3G07960 | 33.333 | 186 | 113 | 4 | 2 | 185 | 48 | 224 | 2.32e-21 | 96.7 |
MS.gene061587.t1 | AT3G07960 | 27.273 | 319 | 188 | 8 | 51 | 348 | 27 | 322 | 7.20e-19 | 89.0 |
MS.gene061587.t1 | AT3G07960 | 34.375 | 192 | 120 | 2 | 9 | 200 | 32 | 217 | 1.09e-23 | 103 |
MS.gene061587.t1 | AT3G07960 | 33.333 | 186 | 113 | 4 | 2 | 185 | 48 | 224 | 2.32e-21 | 96.7 |
MS.gene061587.t1 | AT3G07960 | 27.273 | 319 | 188 | 8 | 51 | 348 | 27 | 322 | 7.20e-19 | 89.0 |
MS.gene061587.t1 | AT3G07960 | 34.375 | 192 | 120 | 2 | 9 | 200 | 32 | 217 | 1.14e-23 | 103 |
MS.gene061587.t1 | AT3G07960 | 33.333 | 186 | 113 | 4 | 2 | 185 | 48 | 224 | 2.24e-21 | 96.7 |
MS.gene061587.t1 | AT3G07960 | 27.273 | 319 | 188 | 8 | 51 | 348 | 27 | 322 | 7.97e-19 | 89.0 |
MS.gene061587.t1 | AT3G07960 | 37.209 | 172 | 102 | 2 | 9 | 180 | 32 | 197 | 1.69e-23 | 103 |
MS.gene061587.t1 | AT3G07960 | 33.333 | 186 | 113 | 4 | 2 | 185 | 48 | 224 | 3.46e-21 | 96.3 |
MS.gene061587.t1 | AT3G07960 | 27.273 | 319 | 188 | 8 | 51 | 348 | 27 | 322 | 1.64e-18 | 88.2 |
MS.gene061587.t1 | AT2G41210 | 36.628 | 172 | 103 | 2 | 9 | 180 | 75 | 240 | 2.02e-22 | 100 |
MS.gene061587.t1 | AT2G41210 | 33.533 | 167 | 105 | 2 | 2 | 168 | 91 | 251 | 5.75e-19 | 89.4 |
MS.gene061587.t1 | AT2G41210 | 28.272 | 191 | 131 | 2 | 97 | 287 | 70 | 254 | 3.64e-14 | 74.7 |
MS.gene061587.t1 | AT3G56960 | 36.047 | 172 | 104 | 2 | 9 | 180 | 77 | 242 | 5.94e-22 | 98.6 |
MS.gene061587.t1 | AT3G56960 | 31.868 | 182 | 117 | 3 | 2 | 183 | 93 | 267 | 1.95e-18 | 87.8 |
MS.gene061587.t1 | AT3G56960 | 27.354 | 223 | 119 | 4 | 97 | 301 | 72 | 269 | 1.13e-14 | 76.3 |
MS.gene061587.t1 | AT3G56960 | 36.047 | 172 | 104 | 2 | 9 | 180 | 77 | 242 | 5.94e-22 | 98.6 |
MS.gene061587.t1 | AT3G56960 | 31.868 | 182 | 117 | 3 | 2 | 183 | 93 | 267 | 1.95e-18 | 87.8 |
MS.gene061587.t1 | AT3G56960 | 27.354 | 223 | 119 | 4 | 97 | 301 | 72 | 269 | 1.13e-14 | 76.3 |
MS.gene061587.t1 | AT2G26420 | 37.356 | 174 | 80 | 3 | 8 | 181 | 57 | 201 | 6.97e-21 | 95.1 |
MS.gene061587.t1 | AT2G26420 | 30.588 | 170 | 110 | 3 | 98 | 266 | 54 | 216 | 4.00e-12 | 68.6 |
MS.gene061587.t1 | AT2G26420 | 37.356 | 174 | 80 | 3 | 8 | 181 | 57 | 201 | 6.97e-21 | 95.1 |
MS.gene061587.t1 | AT2G26420 | 30.588 | 170 | 110 | 3 | 98 | 266 | 54 | 216 | 4.00e-12 | 68.6 |
MS.gene061587.t1 | AT2G26420 | 37.356 | 174 | 80 | 3 | 8 | 181 | 57 | 201 | 7.47e-21 | 95.1 |
MS.gene061587.t1 | AT2G26420 | 30.588 | 170 | 110 | 3 | 98 | 266 | 54 | 216 | 3.50e-12 | 68.6 |
MS.gene061587.t1 | AT4G17080 | 31.092 | 238 | 108 | 5 | 38 | 272 | 242 | 426 | 1.87e-20 | 93.6 |
MS.gene061587.t1 | AT4G17080 | 33.520 | 179 | 113 | 2 | 3 | 181 | 256 | 428 | 1.10e-19 | 91.3 |
MS.gene061587.t1 | AT4G17080 | 28.856 | 201 | 114 | 2 | 26 | 226 | 255 | 426 | 3.55e-15 | 77.4 |
MS.gene061587.t1 | AT4G17080 | 39.604 | 101 | 60 | 1 | 8 | 108 | 330 | 429 | 8.64e-11 | 63.9 |
MS.gene061587.t1 | AT1G77660 | 30.918 | 207 | 132 | 3 | 92 | 293 | 173 | 373 | 2.11e-20 | 92.8 |
MS.gene061587.t1 | AT1G77660 | 29.557 | 203 | 91 | 3 | 1 | 180 | 175 | 348 | 1.29e-15 | 78.6 |
MS.gene061587.t1 | AT1G21920 | 30.244 | 205 | 132 | 3 | 92 | 291 | 169 | 367 | 4.99e-20 | 91.3 |
MS.gene061587.t1 | AT1G21920 | 33.019 | 212 | 111 | 4 | 45 | 255 | 168 | 349 | 1.23e-19 | 90.1 |
MS.gene061587.t1 | AT1G21920 | 31.522 | 184 | 97 | 3 | 1 | 161 | 171 | 348 | 3.85e-16 | 79.7 |
MS.gene061587.t1 | AT1G21920 | 32.086 | 187 | 121 | 2 | 92 | 278 | 169 | 349 | 7.97e-20 | 90.9 |
MS.gene061587.t1 | AT1G21920 | 33.019 | 212 | 111 | 4 | 45 | 255 | 168 | 349 | 1.93e-19 | 89.7 |
MS.gene061587.t1 | AT1G21920 | 31.522 | 184 | 97 | 3 | 1 | 161 | 171 | 348 | 5.39e-16 | 79.7 |
MS.gene061587.t1 | AT2G35170 | 32.961 | 179 | 114 | 2 | 3 | 181 | 225 | 397 | 1.12e-19 | 90.9 |
MS.gene061587.t1 | AT2G35170 | 31.513 | 238 | 107 | 5 | 38 | 272 | 211 | 395 | 1.56e-19 | 90.5 |
MS.gene061587.t1 | AT2G35170 | 31.282 | 195 | 105 | 2 | 32 | 226 | 230 | 395 | 4.65e-15 | 77.0 |
MS.gene061587.t1 | AT2G35170 | 41.584 | 101 | 58 | 1 | 8 | 108 | 299 | 398 | 4.49e-12 | 67.8 |
Find 102 sgRNAs with CRISPR-Local
Find 125 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACCTCCATTCTTATAAGTT+TGG | 0.224406 | 3.2:+59832472 | None:intergenic |
GATTCATATAATAGCTTTGA+TGG | 0.263410 | 3.2:+59831431 | None:intergenic |
AAATTGGAAAACACGGAAAA+TGG | 0.291720 | 3.2:-59832066 | MS.gene061587:CDS |
ACCTCCATTCTTATAAGTTT+GGG | 0.299872 | 3.2:+59832473 | None:intergenic |
GGGATGTCTCCACTGGAAAT+TGG | 0.304984 | 3.2:-59832082 | MS.gene061587:CDS |
AAATTTGACAAAAGACAAAA+TGG | 0.305400 | 3.2:-59831925 | MS.gene061587:CDS |
AAGTATGAGGGTGAATTCTT+TGG | 0.311574 | 3.2:-59832519 | MS.gene061587:CDS |
GATACTGGTGATGTCTTCTA+TGG | 0.312885 | 3.2:-59832158 | MS.gene061587:CDS |
GCTGCTGGTGATGTCTTTGA+TGG | 0.325581 | 3.2:-59831879 | MS.gene061587:CDS |
CAGAGAAAGGCCTGAAGATA+TGG | 0.327525 | 3.2:-59831695 | MS.gene061587:CDS |
GGGATGTCTACATTGGAAAT+TGG | 0.328769 | 3.2:-59832317 | MS.gene061587:CDS |
TATGAGGGTGATTGGGTTGA+TGG | 0.335707 | 3.2:-59832585 | MS.gene061587:CDS |
GGAAAATACACACGCTCAAT+TGG | 0.335840 | 3.2:-59831756 | MS.gene061587:CDS |
TTCTATGGTTGTTGGTCAAA+TGG | 0.344466 | 3.2:-59832143 | MS.gene061587:CDS |
GATCAATATATGAGGGTGAT+TGG | 0.359146 | 3.2:-59832593 | MS.gene061587:CDS |
TCATTGCAGATTTCAAATAA+AGG | 0.363457 | 3.2:-59831645 | MS.gene061587:CDS |
GAACAATAAACGAGGGTGAT+TGG | 0.367652 | 3.2:-59831734 | MS.gene061587:CDS |
GTGATGTCTTTGATGGTTGT+TGG | 0.371599 | 3.2:-59831872 | MS.gene061587:CDS |
AATGGACTTAGACATGGATT+TGG | 0.376853 | 3.2:-59831984 | MS.gene061587:CDS |
AATGGACTTATACATGGATA+TGG | 0.378270 | 3.2:-59831846 | MS.gene061587:CDS |
GCTAACGAGGATGTCGATAT+TGG | 0.378942 | 3.2:-59831810 | MS.gene061587:CDS |
AATGGACTTCAACATGGATA+TGG | 0.393948 | 3.2:-59832125 | MS.gene061587:CDS |
GAGGTAGCTACATTGGAAAT+TGG | 0.394936 | 3.2:-59832455 | MS.gene061587:CDS |
TTTGATGGTTGTTGGTCAAA+TGG | 0.395785 | 3.2:-59831864 | MS.gene061587:CDS |
AACAATAAACGAGGGTGATT+GGG | 0.398395 | 3.2:-59831733 | MS.gene061587:CDS |
CAAAGAAGAGATCGTGCATA+TGG | 0.398435 | 3.2:-59831467 | MS.gene061587:CDS |
AGTATGAGGGTGAATTCTTT+GGG | 0.399117 | 3.2:-59832518 | MS.gene061587:CDS |
GGCATCTGGTCTGAGCCCTT+TGG | 0.402901 | 3.2:-59831613 | MS.gene061587:CDS |
GGGATTATGAGTTGGGATAC+TGG | 0.413810 | 3.2:-59832173 | MS.gene061587:CDS |
TTTGAAGGGCCCATATCTTC+AGG | 0.413912 | 3.2:+59831685 | None:intergenic |
TTATGTGTTACTTCTGAATA+CGG | 0.414297 | 3.2:+59831540 | None:intergenic |
GAGTTTCTAGATTTGCAAAT+GGG | 0.424260 | 3.2:-59832338 | MS.gene061587:CDS |
TGGATCAGGGATTATGAGTT+GGG | 0.431926 | 3.2:-59832180 | MS.gene061587:CDS |
GTGATGTCTTCTATGGTTGT+TGG | 0.434669 | 3.2:-59832151 | MS.gene061587:CDS |
TGAGCCCTTTGGTTATCAAA+AGG | 0.442205 | 3.2:-59831602 | MS.gene061587:CDS |
GGAGTTTCTAGATTTGCAAA+TGG | 0.447368 | 3.2:-59832339 | MS.gene061587:CDS |
TGGGTTGATGGAGATAAGAC+AGG | 0.450163 | 3.2:-59832573 | MS.gene061587:CDS |
GGGATTGAGACTTCGGCTAA+TGG | 0.453469 | 3.2:-59832408 | MS.gene061587:CDS |
AAAGGTAAGTCTGAGGCATC+TGG | 0.454416 | 3.2:-59831627 | MS.gene061587:CDS |
ATTTGAAATCTGCAATGAAG+TGG | 0.473202 | 3.2:+59831650 | None:intergenic |
TGATGATGGATCAATATATG+AGG | 0.474674 | 3.2:-59832601 | MS.gene061587:CDS |
GAGTTTATAGATCCGCAAAT+GGG | 0.476226 | 3.2:-59832103 | MS.gene061587:CDS |
TACATTGGTAACATCAAGAA+TGG | 0.480521 | 3.2:-59832657 | MS.gene061587:CDS |
CCCTCATACTTGTCTCCTGA+TGG | 0.482924 | 3.2:+59832531 | None:intergenic |
GGAGTTTATAGATCCGCAAA+TGG | 0.482951 | 3.2:-59832104 | MS.gene061587:CDS |
GGCACCCAAACTTATAAGAA+TGG | 0.483958 | 3.2:-59832477 | MS.gene061587:CDS |
GGAGTTTATAGATTTGCAAA+TGG | 0.487399 | 3.2:-59831963 | MS.gene061587:CDS |
GAGCCCTTTGGTTATCAAAA+GGG | 0.495737 | 3.2:-59831601 | MS.gene061587:CDS |
AGAGAAAGGCCTGAAGATAT+GGG | 0.500116 | 3.2:-59831694 | MS.gene061587:CDS |
TTCTTTGGGAATTGCCGTCA+TGG | 0.500760 | 3.2:-59832504 | MS.gene061587:CDS |
GCCATCAGGAGACAAGTATG+AGG | 0.502897 | 3.2:-59832532 | MS.gene061587:CDS |
TGGTCAAATGGACTTATACA+TGG | 0.503975 | 3.2:-59831852 | MS.gene061587:CDS |
AAACACGGAAAATGGATGTT+GGG | 0.504630 | 3.2:-59832058 | MS.gene061587:CDS |
GCAAATGGGGATGTCTCCAC+TGG | 0.507526 | 3.2:-59832089 | MS.gene061587:CDS |
AGTGGAGACATCCCCATTTG+CGG | 0.507630 | 3.2:+59832091 | None:intergenic |
AAAATGAAAGGGATGGATCA+GGG | 0.508482 | 3.2:-59832193 | MS.gene061587:CDS |
TGCAATGAAGTGGAACCATC+GGG | 0.511793 | 3.2:+59831660 | None:intergenic |
AAGAATGGAGGTAGCTACAT+TGG | 0.512285 | 3.2:-59832462 | MS.gene061587:CDS |
TGAAACATGGATTATGAGTT+GGG | 0.514796 | 3.2:-59831901 | MS.gene061587:CDS |
ATCAATATATGAGGGTGATT+GGG | 0.524240 | 3.2:-59832592 | MS.gene061587:CDS |
CTGCAATGAAGTGGAACCAT+CGG | 0.525925 | 3.2:+59831659 | None:intergenic |
GGGAATTGCCGTCATGGCAA+TGG | 0.527145 | 3.2:-59832498 | MS.gene061587:CDS |
ATGGATCAGGGATTATGAGT+TGG | 0.528428 | 3.2:-59832181 | MS.gene061587:CDS |
AATGATAAAAGAGATGGAAG+AGG | 0.531418 | 3.2:-59832429 | MS.gene061587:CDS |
TGGAAGAGGGATTGAGACTT+CGG | 0.536168 | 3.2:-59832415 | MS.gene061587:CDS |
AAGTACACACGGTTTGATGA+TGG | 0.537447 | 3.2:-59832615 | MS.gene061587:CDS |
ATGAAACATGGATTATGAGT+TGG | 0.538691 | 3.2:-59831902 | MS.gene061587:CDS |
GCAAATGGGGATGTCTACAT+TGG | 0.539662 | 3.2:-59832324 | MS.gene061587:CDS |
TGGATTATGAGTTGGGCTGC+TGG | 0.540034 | 3.2:-59831894 | MS.gene061587:CDS |
AAAACACGGAAAATGGATGT+TGG | 0.541788 | 3.2:-59832059 | MS.gene061587:CDS |
AATGGACTTGCTCATGGCAA+AGG | 0.546265 | 3.2:-59832639 | MS.gene061587:CDS |
AAAGAAGAGATCGTGCATAT+GGG | 0.548304 | 3.2:-59831466 | MS.gene061587:CDS |
TTTGGGTGCCATTGCCATGA+CGG | 0.549134 | 3.2:+59832490 | None:intergenic |
ATGATAAAAGAGATGGAAGA+GGG | 0.554175 | 3.2:-59832428 | MS.gene061587:CDS |
ATCAAGAATGGACTTGCTCA+TGG | 0.558306 | 3.2:-59832645 | MS.gene061587:CDS |
GCAAATGGTGATGTCTACAT+TGG | 0.564558 | 3.2:-59831948 | MS.gene061587:CDS |
GATGGAGATAAGACAGGGAA+AGG | 0.568932 | 3.2:-59832567 | MS.gene061587:CDS |
TGGTCAAATGGACTTCAACA+TGG | 0.576448 | 3.2:-59832131 | MS.gene061587:CDS |
ATCAAAAGGGAATATATGCA+AGG | 0.589384 | 3.2:-59831588 | MS.gene061587:CDS |
ATGTCAAATGGACTTAGACA+TGG | 0.597161 | 3.2:-59831990 | MS.gene061587:CDS |
AGTAAACTTCTCCATGACAA+TGG | 0.599616 | 3.2:-59831777 | MS.gene061587:CDS |
CCACTGGAAATTGGAAAACA+CGG | 0.603344 | 3.2:-59832073 | MS.gene061587:CDS |
TTCAAATAAAGGTAAGTCTG+AGG | 0.603610 | 3.2:-59831634 | MS.gene061587:CDS |
GGACTGTTCATAGAGCCATC+AGG | 0.607086 | 3.2:-59832546 | MS.gene061587:CDS |
TACATTGGAAATTGGACTTG+TGG | 0.609300 | 3.2:-59832309 | MS.gene061587:intron |
AGTTTCTAGATTTGCAAATG+GGG | 0.609982 | 3.2:-59832337 | MS.gene061587:CDS |
TCAGACGAGGGTGTCTACAT+TGG | 0.615373 | 3.2:-59832672 | MS.gene061587:CDS |
GGGTTGATGGAGATAAGACA+GGG | 0.616802 | 3.2:-59832572 | MS.gene061587:CDS |
CCATCAGGAGACAAGTATGA+GGG | 0.619284 | 3.2:-59832531 | MS.gene061587:CDS |
AAAGATGTTGTATTCAGACG+AGG | 0.623934 | 3.2:-59832685 | None:intergenic |
AGTTTATAGATCCGCAAATG+GGG | 0.634644 | 3.2:-59832102 | MS.gene061587:CDS |
AAGATGTTGTATTCAGACGA+GGG | 0.637143 | 3.2:-59832684 | MS.gene061587:CDS |
AAGACAAAATGGATGAAACA+TGG | 0.637388 | 3.2:-59831914 | MS.gene061587:CDS |
TATGCAAGGAGTTCTTATTG+TGG | 0.641870 | 3.2:-59831574 | MS.gene061587:CDS |
GGAAAATGGATGTTGGGAGA+CGG | 0.645789 | 3.2:-59832052 | MS.gene061587:CDS |
ACCCAAACTTATAAGAATGG+AGG | 0.651940 | 3.2:-59832474 | MS.gene061587:CDS |
CTCAATTGGAACAATAAACG+AGG | 0.654960 | 3.2:-59831742 | MS.gene061587:CDS |
GATGATGGATCAATATATGA+GGG | 0.656551 | 3.2:-59832600 | MS.gene061587:CDS |
TGGGCCCTTCAAAATCCCGA+TGG | 0.671812 | 3.2:-59831675 | MS.gene061587:CDS |
TCAATTGGAACAATAAACGA+GGG | 0.715645 | 3.2:-59831741 | MS.gene061587:CDS |
AGTTTATAGATATGCTAACG+AGG | 0.727650 | 3.2:-59831823 | MS.gene061587:CDS |
ATGGCAAAGGAAAGTACACA+CGG | 0.733793 | 3.2:-59832626 | MS.gene061587:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTTGGAAAAAAAAATGAA+AGG | - | chr3.2:59831910-59831929 | MS.gene061587:CDS | 15.0% |
!! | ATTTGGAAAAAAAAATGAAA+GGG | - | chr3.2:59831911-59831930 | MS.gene061587:CDS | 15.0% |
!! | AAATTTGACAAAAGACAAAA+TGG | - | chr3.2:59832190-59832209 | MS.gene061587:CDS | 20.0% |
!! | AATAACAACAACAAAAAACA+GGG | - | chr3.2:59832605-59832624 | MS.gene061587:CDS | 20.0% |
!! | AGTTTATAGATATGCAAATT+GGG | - | chr3.2:59831874-59831893 | MS.gene061587:CDS | 20.0% |
!! | TAATAACAACAACAAAAAAC+AGG | - | chr3.2:59832604-59832623 | MS.gene061587:CDS | 20.0% |
! | GAGTTTATAGATATGCAAAT+TGG | - | chr3.2:59831873-59831892 | MS.gene061587:CDS | 25.0% |
! | TCATTGCAGATTTCAAATAA+AGG | - | chr3.2:59832470-59832489 | MS.gene061587:CDS | 25.0% |
! | TGGAAAAATGATAAAAGAGA+TGG | - | chr3.2:59831680-59831699 | MS.gene061587:CDS | 25.0% |
!! | AATGATTTTGTACATGGATA+TGG | - | chr3.2:59831755-59831774 | MS.gene061587:CDS | 25.0% |
!! | TTTTATCGTTGTATGTCAAA+TGG | - | chr3.2:59832113-59832132 | MS.gene061587:CDS | 25.0% |
!!! | TTATGTGTTACTTCTGAATA+CGG | + | chr3.2:59832578-59832597 | None:intergenic | 25.0% |
AAATTGGAAAACACGGAAAA+TGG | - | chr3.2:59832049-59832068 | MS.gene061587:CDS | 30.0% | |
AAGACAAAATGGATGAAACA+TGG | - | chr3.2:59832201-59832220 | MS.gene061587:CDS | 30.0% | |
AATGATAAAAGAGATGGAAG+AGG | - | chr3.2:59831686-59831705 | MS.gene061587:CDS | 30.0% | |
ACCTCCATTCTTATAAGTTT+GGG | + | chr3.2:59831645-59831664 | None:intergenic | 30.0% | |
AGTTTATAGATATGCTAACG+AGG | - | chr3.2:59832292-59832311 | MS.gene061587:intron | 30.0% | |
ATCAAAAGGGAATATATGCA+AGG | - | chr3.2:59832527-59832546 | MS.gene061587:CDS | 30.0% | |
ATCAATATATGAGGGTGATT+GGG | - | chr3.2:59831523-59831542 | MS.gene061587:CDS | 30.0% | |
ATGATAAAAGAGATGGAAGA+GGG | - | chr3.2:59831687-59831706 | MS.gene061587:CDS | 30.0% | |
GGAAAAAAAAATGAAAGGGA+TGG | - | chr3.2:59831915-59831934 | MS.gene061587:CDS | 30.0% | |
GGAGTTTATAGATTTGCAAA+TGG | - | chr3.2:59832152-59832171 | MS.gene061587:CDS | 30.0% | |
GTTAAAAAAGTGACAGAGAA+AGG | - | chr3.2:59832407-59832426 | MS.gene061587:CDS | 30.0% | |
TACCTCCATTCTTATAAGTT+TGG | + | chr3.2:59831646-59831665 | None:intergenic | 30.0% | |
TCAATTGGAACAATAAACGA+GGG | - | chr3.2:59832374-59832393 | MS.gene061587:CDS | 30.0% | |
TTCAAATAAAGGTAAGTCTG+AGG | - | chr3.2:59832481-59832500 | MS.gene061587:CDS | 30.0% | |
! | AATGGACTTATACATGGATA+TGG | - | chr3.2:59832269-59832288 | MS.gene061587:intron | 30.0% |
! | AGTTTCTAGATTTGCAAATG+GGG | - | chr3.2:59831778-59831797 | MS.gene061587:CDS | 30.0% |
! | ATGAAACATGGATTATGAGT+TGG | - | chr3.2:59832213-59832232 | MS.gene061587:intron | 30.0% |
! | ATTTGAAATCTGCAATGAAG+TGG | + | chr3.2:59832468-59832487 | None:intergenic | 30.0% |
! | GAGTTTCTAGATTTGCAAAT+GGG | - | chr3.2:59831777-59831796 | MS.gene061587:CDS | 30.0% |
! | TACATTGGTAACATCAAGAA+TGG | - | chr3.2:59831458-59831477 | MS.gene061587:CDS | 30.0% |
! | TGAAACATGGATTATGAGTT+GGG | - | chr3.2:59832214-59832233 | MS.gene061587:intron | 30.0% |
! | TGGTCAAATGATTTTGTACA+TGG | - | chr3.2:59831749-59831768 | MS.gene061587:CDS | 30.0% |
!! | ATTCCCTTTTGATAACCAAA+GGG | + | chr3.2:59832520-59832539 | None:intergenic | 30.0% |
!! | GATGATGGATCAATATATGA+GGG | - | chr3.2:59831515-59831534 | MS.gene061587:CDS | 30.0% |
!! | TATTCCCTTTTGATAACCAA+AGG | + | chr3.2:59832521-59832540 | None:intergenic | 30.0% |
!! | TGATGATGGATCAATATATG+AGG | - | chr3.2:59831514-59831533 | MS.gene061587:CDS | 30.0% |
AAAAATGAAAGGGATGGATC+AGG | - | chr3.2:59831921-59831940 | MS.gene061587:CDS | 35.0% | |
AAAACACGGAAAATGGATGT+TGG | - | chr3.2:59832056-59832075 | MS.gene061587:CDS | 35.0% | |
AAAATGAAAGGGATGGATCA+GGG | - | chr3.2:59831922-59831941 | MS.gene061587:CDS | 35.0% | |
AAACACGGAAAATGGATGTT+GGG | - | chr3.2:59832057-59832076 | MS.gene061587:CDS | 35.0% | |
AAAGAAGAGATCGTGCATAT+GGG | - | chr3.2:59832649-59832668 | MS.gene061587:CDS | 35.0% | |
AACAATAAACGAGGGTGATT+GGG | - | chr3.2:59832382-59832401 | MS.gene061587:CDS | 35.0% | |
AAGTATGAGGGTGAATTCTT+TGG | - | chr3.2:59831596-59831615 | MS.gene061587:CDS | 35.0% | |
ACCCAAACTTATAAGAATGG+AGG | - | chr3.2:59831641-59831660 | MS.gene061587:CDS | 35.0% | |
AGTAAACTTCTCCATGACAA+TGG | - | chr3.2:59832338-59832357 | MS.gene061587:CDS | 35.0% | |
AGTATGAGGGTGAATTCTTT+GGG | - | chr3.2:59831597-59831616 | MS.gene061587:CDS | 35.0% | |
AGTTTATAGATCCGCAAATG+GGG | - | chr3.2:59832013-59832032 | MS.gene061587:CDS | 35.0% | |
CTCAATTGGAACAATAAACG+AGG | - | chr3.2:59832373-59832392 | MS.gene061587:CDS | 35.0% | |
GAGTTTATAGATCCGCAAAT+GGG | - | chr3.2:59832012-59832031 | MS.gene061587:CDS | 35.0% | |
GATCAATATATGAGGGTGAT+TGG | - | chr3.2:59831522-59831541 | MS.gene061587:CDS | 35.0% | |
TACATTGGAAATTGGACTTG+TGG | - | chr3.2:59831806-59831825 | MS.gene061587:CDS | 35.0% | |
TATGCAAGGAGTTCTTATTG+TGG | - | chr3.2:59832541-59832560 | MS.gene061587:CDS | 35.0% | |
TTCTATGGTTGTTGGTCAAA+TGG | - | chr3.2:59831972-59831991 | MS.gene061587:CDS | 35.0% | |
! | AATGGACTTAGACATGGATT+TGG | - | chr3.2:59832131-59832150 | MS.gene061587:CDS | 35.0% |
! | AATGGACTTCAACATGGATA+TGG | - | chr3.2:59831990-59832009 | MS.gene061587:CDS | 35.0% |
! | ATGTCAAATGGACTTAGACA+TGG | - | chr3.2:59832125-59832144 | MS.gene061587:CDS | 35.0% |
! | GGAGTTTCTAGATTTGCAAA+TGG | - | chr3.2:59831776-59831795 | MS.gene061587:CDS | 35.0% |
! | GTGTGTATTTTCCATTGTCA+TGG | + | chr3.2:59832352-59832371 | None:intergenic | 35.0% |
! | TGGTCAAATGGACTTATACA+TGG | - | chr3.2:59832263-59832282 | MS.gene061587:intron | 35.0% |
! | TTTGATGGTTGTTGGTCAAA+TGG | - | chr3.2:59831737-59831756 | MS.gene061587:CDS | 35.0% |
!! | ACTTGTGGTGATGTTTTTGA+TGG | - | chr3.2:59831821-59831840 | MS.gene061587:CDS | 35.0% |
!! | GCTAATGGTGATGTTTTTGA+TGG | - | chr3.2:59831722-59831741 | MS.gene061587:CDS | 35.0% |
!! | GTGATGTTTTTGATGGTTGT+TGG | - | chr3.2:59831729-59831748 | MS.gene061587:CDS | 35.0% |
AAGAATGGAGGTAGCTACAT+TGG | - | chr3.2:59831653-59831672 | MS.gene061587:CDS | 40.0% | |
AAGTACACACGGTTTGATGA+TGG | - | chr3.2:59831500-59831519 | MS.gene061587:CDS | 40.0% | |
AGAGAAAGGCCTGAAGATAT+GGG | - | chr3.2:59832421-59832440 | MS.gene061587:CDS | 40.0% | |
ATGGATCAGGGATTATGAGT+TGG | - | chr3.2:59831934-59831953 | MS.gene061587:CDS | 40.0% | |
CAAAGAAGAGATCGTGCATA+TGG | - | chr3.2:59832648-59832667 | MS.gene061587:CDS | 40.0% | |
CCACTGGAAATTGGAAAACA+CGG | - | chr3.2:59832042-59832061 | MS.gene061587:CDS | 40.0% | |
GAACAATAAACGAGGGTGAT+TGG | - | chr3.2:59832381-59832400 | MS.gene061587:CDS | 40.0% | |
GAGCCCTTTGGTTATCAAAA+GGG | - | chr3.2:59832514-59832533 | MS.gene061587:CDS | 40.0% | |
GAGGTAGCTACATTGGAAAT+TGG | - | chr3.2:59831660-59831679 | MS.gene061587:CDS | 40.0% | |
GGAAAATACACACGCTCAAT+TGG | - | chr3.2:59832359-59832378 | MS.gene061587:CDS | 40.0% | |
GGAGTTTATAGATCCGCAAA+TGG | - | chr3.2:59832011-59832030 | MS.gene061587:CDS | 40.0% | |
GGCACCCAAACTTATAAGAA+TGG | - | chr3.2:59831638-59831657 | MS.gene061587:CDS | 40.0% | |
GGGATGTCTACATTGGAAAT+TGG | - | chr3.2:59831798-59831817 | MS.gene061587:CDS | 40.0% | |
GGGCTGTCTATATCAGAATT+TGG | - | chr3.2:59831894-59831913 | MS.gene061587:CDS | 40.0% | |
GTGATGTCTTCTATGGTTGT+TGG | - | chr3.2:59831964-59831983 | MS.gene061587:CDS | 40.0% | |
TCAATTGCGCTTCATGGATT+TGG | - | chr3.2:59831851-59831870 | MS.gene061587:CDS | 40.0% | |
TGAGCCCTTTGGTTATCAAA+AGG | - | chr3.2:59832513-59832532 | MS.gene061587:CDS | 40.0% | |
TGGATCAGGGATTATGAGTT+GGG | - | chr3.2:59831935-59831954 | MS.gene061587:CDS | 40.0% | |
! | ATCAAGAATGGACTTGCTCA+TGG | - | chr3.2:59831470-59831489 | MS.gene061587:CDS | 40.0% |
! | ATGGCAAAGGAAAGTACACA+CGG | - | chr3.2:59831489-59831508 | MS.gene061587:CDS | 40.0% |
! | GATACTGGTGATGTCTTCTA+TGG | - | chr3.2:59831957-59831976 | MS.gene061587:CDS | 40.0% |
! | GCAAATGGTGATGTCTACAT+TGG | - | chr3.2:59832167-59832186 | MS.gene061587:CDS | 40.0% |
! | GTGATGTCTTTGATGGTTGT+TGG | - | chr3.2:59832243-59832262 | MS.gene061587:intron | 40.0% |
! | TGGTCAAATGGACTTCAACA+TGG | - | chr3.2:59831984-59832003 | MS.gene061587:CDS | 40.0% |
!! | CGGTTTTTCGATTGCACTAA+TGG | - | chr3.2:59832083-59832102 | MS.gene061587:CDS | 40.0% |
CAGAGAAAGGCCTGAAGATA+TGG | - | chr3.2:59832420-59832439 | MS.gene061587:CDS | 45.0% | |
CCATCAGGAGACAAGTATGA+GGG | - | chr3.2:59831584-59831603 | MS.gene061587:CDS | 45.0% | |
CTGCAATGAAGTGGAACCAT+CGG | + | chr3.2:59832459-59832478 | None:intergenic | 45.0% | |
GATGGAGATAAGACAGGGAA+AGG | - | chr3.2:59831548-59831567 | MS.gene061587:CDS | 45.0% | |
GCAAATGGGGATGTCTACAT+TGG | - | chr3.2:59831791-59831810 | MS.gene061587:CDS | 45.0% | |
GCTAACGAGGATGTCGATAT+TGG | - | chr3.2:59832305-59832324 | MS.gene061587:intron | 45.0% | |
GGAAAATGGATGTTGGGAGA+CGG | - | chr3.2:59832063-59832082 | MS.gene061587:CDS | 45.0% | |
TGCAATGAAGTGGAACCATC+GGG | + | chr3.2:59832458-59832477 | None:intergenic | 45.0% | |
TGGAAGAGGGATTGAGACTT+CGG | - | chr3.2:59831700-59831719 | MS.gene061587:CDS | 45.0% | |
TGTCGATCAATTGCGCTTCA+TGG | - | chr3.2:59831845-59831864 | MS.gene061587:CDS | 45.0% | |
TTTGAAGGGCCCATATCTTC+AGG | + | chr3.2:59832433-59832452 | None:intergenic | 45.0% | |
! | AAAGGTAAGTCTGAGGCATC+TGG | - | chr3.2:59832488-59832507 | MS.gene061587:CDS | 45.0% |
! | AATGGACTTGCTCATGGCAA+AGG | - | chr3.2:59831476-59831495 | MS.gene061587:CDS | 45.0% |
! | CCGTGTTTTCCAATTTCCAG+TGG | + | chr3.2:59832045-59832064 | None:intergenic | 45.0% |
! | GGAACCATCGGGATTTTGAA+GGG | + | chr3.2:59832447-59832466 | None:intergenic | 45.0% |
! | GGGATTATGAGTTGGGATAC+TGG | - | chr3.2:59831942-59831961 | MS.gene061587:CDS | 45.0% |
! | TGGAACCATCGGGATTTTGA+AGG | + | chr3.2:59832448-59832467 | None:intergenic | 45.0% |
! | TTCTTTGGGAATTGCCGTCA+TGG | - | chr3.2:59831611-59831630 | MS.gene061587:CDS | 45.0% |
!! | GGGTTGATGGAGATAAGACA+GGG | - | chr3.2:59831543-59831562 | MS.gene061587:CDS | 45.0% |
!! | TATGAGGGTGATTGGGTTGA+TGG | - | chr3.2:59831530-59831549 | MS.gene061587:CDS | 45.0% |
!! | TGGGTTGATGGAGATAAGAC+AGG | - | chr3.2:59831542-59831561 | MS.gene061587:CDS | 45.0% |
AGTGGAGACATCCCCATTTG+CGG | + | chr3.2:59832027-59832046 | None:intergenic | 50.0% | |
CCCTCATACTTGTCTCCTGA+TGG | + | chr3.2:59831587-59831606 | None:intergenic | 50.0% | |
GCCATCAGGAGACAAGTATG+AGG | - | chr3.2:59831583-59831602 | MS.gene061587:CDS | 50.0% | |
GGACTGTTCATAGAGCCATC+AGG | - | chr3.2:59831569-59831588 | MS.gene061587:CDS | 50.0% | |
GGGATGTCTCCACTGGAAAT+TGG | - | chr3.2:59832033-59832052 | MS.gene061587:CDS | 50.0% | |
GGGATTGAGACTTCGGCTAA+TGG | - | chr3.2:59831707-59831726 | MS.gene061587:CDS | 50.0% | |
! | GCTGCTGGTGATGTCTTTGA+TGG | - | chr3.2:59832236-59832255 | MS.gene061587:intron | 50.0% |
! | TGGATTATGAGTTGGGCTGC+TGG | - | chr3.2:59832221-59832240 | MS.gene061587:intron | 50.0% |
!! | TCAGACGAGGGTGTCTACAT+TGG | - | chr3.2:59831443-59831462 | MS.gene061587:CDS | 50.0% |
!! | TTTGGGTGCCATTGCCATGA+CGG | + | chr3.2:59831628-59831647 | None:intergenic | 50.0% |
GCAAATGGGGATGTCTCCAC+TGG | - | chr3.2:59832026-59832045 | MS.gene061587:CDS | 55.0% | |
GGGAATTGCCGTCATGGCAA+TGG | - | chr3.2:59831617-59831636 | MS.gene061587:CDS | 55.0% | |
TGGGCCCTTCAAAATCCCGA+TGG | - | chr3.2:59832440-59832459 | MS.gene061587:CDS | 55.0% | |
GGCATCTGGTCTGAGCCCTT+TGG | - | chr3.2:59832502-59832521 | MS.gene061587:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 59831434 | 59832703 | 59831434 | ID=MS.gene061587 |
chr3.2 | mRNA | 59831434 | 59832703 | 59831434 | ID=MS.gene061587.t1;Parent=MS.gene061587 |
chr3.2 | exon | 59832310 | 59832703 | 59832310 | ID=MS.gene061587.t1.exon1;Parent=MS.gene061587.t1 |
chr3.2 | CDS | 59832310 | 59832703 | 59832310 | ID=cds.MS.gene061587.t1;Parent=MS.gene061587.t1 |
chr3.2 | exon | 59831434 | 59832227 | 59831434 | ID=MS.gene061587.t1.exon2;Parent=MS.gene061587.t1 |
chr3.2 | CDS | 59831434 | 59832227 | 59831434 | ID=cds.MS.gene061587.t1;Parent=MS.gene061587.t1 |
Gene Sequence |
Protein sequence |