AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene061710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene061710.t1 MTR_1g035010 97.595 873 21 0 1 873 103 975 0.0 1767
MS.gene061710.t1 MTR_7g110320 32.517 572 342 12 332 873 415 972 7.96e-82 284
MS.gene061710.t1 MTR_7g110320 73.404 94 25 0 1 94 144 237 1.48e-37 152
MS.gene061710.t1 MTR_1g086250 32.332 566 349 11 334 873 225 782 1.01e-78 272
MS.gene061710.t1 MTR_1g086250 32.332 566 349 11 334 873 417 974 2.96e-77 271
MS.gene061710.t1 MTR_1g086250 75.862 87 20 1 1 87 146 231 1.80e-35 145
MS.gene061710.t1 MTR_2g046550 30.686 554 320 17 364 873 228 761 2.08e-73 257
MS.gene061710.t1 MTR_2g046550 30.686 554 320 17 364 873 463 996 9.32e-72 256
MS.gene061710.t1 MTR_2g046550 64.486 107 38 0 1 107 138 244 1.66e-38 155
MS.gene061710.t1 MTR_7g110320 34.529 446 264 9 332 757 415 852 1.54e-68 244
MS.gene061710.t1 MTR_7g110320 73.404 94 25 0 1 94 144 237 7.93e-38 153
MS.gene061710.t1 MTR_8g096780 67.901 81 26 0 2 82 99 179 3.73e-32 130
MS.gene061710.t1 MTR_8g463140 67.059 85 28 0 2 86 65 149 2.60e-31 121
MS.gene061710.t1 MTR_2g014200 72.000 75 21 0 2 76 64 138 1.38e-30 117
MS.gene061710.t1 MTR_4g088555 69.231 78 24 0 2 79 63 140 5.06e-30 116
MS.gene061710.t1 MTR_8g005960 71.053 76 22 0 2 77 187 262 9.58e-30 121
MS.gene061710.t1 MTR_2g078770 62.069 87 33 0 1 87 57 143 1.14e-29 116
MS.gene061710.t1 MTR_2g461920 71.053 76 22 0 2 77 171 246 2.20e-29 124
MS.gene061710.t1 MTR_1g053715 63.636 88 32 0 2 89 74 161 2.85e-29 120
MS.gene061710.t1 MTR_3g099080 45.985 137 68 2 2 132 98 234 3.67e-29 120
MS.gene061710.t1 MTR_5g046670 67.089 79 26 0 1 79 243 321 7.41e-29 122
MS.gene061710.t1 MTR_7g028740 64.103 78 28 0 1 78 76 153 8.79e-29 119
MS.gene061710.t1 MTR_7g444860 66.667 81 27 0 2 82 149 229 9.72e-29 118
MS.gene061710.t1 MTR_7g092930 63.750 80 29 0 2 81 68 147 9.10e-28 115
MS.gene061710.t1 MTR_4g109770 68.421 76 24 0 2 77 123 198 1.15e-27 118
MS.gene061710.t1 MTR_3g085180 58.824 85 35 0 2 86 165 249 3.91e-27 115
MS.gene061710.t1 MTR_2g020620 26.301 346 213 9 347 669 259 585 2.11e-25 113
MS.gene061710.t1 MTR_2g020620 48.235 85 43 1 11 95 99 182 2.07e-17 87.8
MS.gene061710.t1 MTR_8g080690 60.256 78 31 0 2 79 151 228 2.50e-25 109
MS.gene061710.t1 MTR_2g020620 26.301 346 213 9 347 669 155 481 8.33e-25 110
MS.gene061710.t1 MTR_2g020620 26.300 327 206 8 366 669 3 317 1.54e-24 108
MS.gene061710.t1 MTR_8g080680 56.757 74 32 0 2 75 132 205 3.84e-21 97.4
MS.gene061710.t1 MTR_8g080670 56.757 74 32 0 1 74 161 234 1.16e-20 95.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene061710.t1 AT1G20980 51.254 917 367 21 1 869 119 1003 0.0 829
MS.gene061710.t1 AT1G76580 49.783 920 367 20 2 870 114 989 0.0 821
MS.gene061710.t1 AT1G76580 49.097 609 231 15 2 560 114 693 3.59e-169 508
MS.gene061710.t1 AT1G76580 49.094 607 230 15 2 558 114 691 5.02e-168 505
MS.gene061710.t1 AT2G47070 32.129 526 310 12 364 873 229 723 1.28e-75 263
MS.gene061710.t1 AT2G47070 58.025 81 32 1 27 107 2 80 1.92e-20 97.4
MS.gene061710.t1 AT2G47070 32.129 526 310 12 364 873 358 852 9.16e-75 263
MS.gene061710.t1 AT2G47070 62.617 107 38 1 1 107 105 209 3.50e-35 144
MS.gene061710.t1 AT3G60030 33.898 531 299 16 364 873 399 898 1.07e-74 263
MS.gene061710.t1 AT3G60030 66.038 106 35 1 2 107 127 231 1.06e-36 149
MS.gene061710.t1 AT1G53160 65.116 86 30 0 1 86 53 138 4.34e-31 120
MS.gene061710.t1 AT1G53160 65.116 86 30 0 1 86 53 138 7.59e-31 119
MS.gene061710.t1 AT1G53160 65.116 86 30 0 1 86 53 138 7.59e-31 119
MS.gene061710.t1 AT3G15270 64.286 84 30 0 1 84 62 145 3.10e-30 118
MS.gene061710.t1 AT2G33810 65.823 79 27 0 1 79 53 131 3.27e-30 116
MS.gene061710.t1 AT5G50670 60.976 82 32 0 1 82 100 181 1.70e-29 121
MS.gene061710.t1 AT5G50670 60.976 82 32 0 1 82 100 181 1.70e-29 121
MS.gene061710.t1 AT5G50570 60.976 82 32 0 1 82 100 181 1.70e-29 121
MS.gene061710.t1 AT5G50570 60.976 82 32 0 1 82 100 181 1.70e-29 121
MS.gene061710.t1 AT1G69170 70.667 75 22 0 1 75 123 197 1.87e-29 122
MS.gene061710.t1 AT1G02065 71.622 74 21 0 2 75 188 261 2.48e-28 117
MS.gene061710.t1 AT5G18830 30.837 227 153 2 367 589 320 546 2.76e-28 122
MS.gene061710.t1 AT5G18830 48.810 84 43 0 2 85 138 221 1.01e-19 95.1
MS.gene061710.t1 AT5G18830 30.837 227 153 2 367 589 320 546 2.86e-28 122
MS.gene061710.t1 AT5G18830 48.810 84 43 0 2 85 138 221 1.12e-19 95.1
MS.gene061710.t1 AT5G18830 30.837 227 153 2 367 589 320 546 3.38e-28 122
MS.gene061710.t1 AT5G18830 48.810 84 43 0 2 85 138 221 1.12e-19 95.1
MS.gene061710.t1 AT1G27370 58.427 89 30 1 2 90 176 257 8.24e-27 113
MS.gene061710.t1 AT5G43270 51.786 112 47 2 2 113 169 273 1.09e-26 114
MS.gene061710.t1 AT5G43270 51.786 112 47 2 2 113 169 273 1.09e-26 114
MS.gene061710.t1 AT5G43270 51.786 112 47 2 2 113 169 273 1.09e-26 114
MS.gene061710.t1 AT1G27370 58.427 89 30 1 2 90 176 257 1.44e-26 113
MS.gene061710.t1 AT1G27370 58.427 89 30 1 2 90 176 257 1.44e-26 113
MS.gene061710.t1 AT1G27370 58.427 89 30 1 2 90 176 257 1.44e-26 113
MS.gene061710.t1 AT1G27370 58.427 89 30 1 2 90 176 257 1.44e-26 113
MS.gene061710.t1 AT1G27370 58.427 89 30 1 2 90 176 257 1.44e-26 113
MS.gene061710.t1 AT1G27370 58.427 89 30 1 2 90 176 257 1.44e-26 113
MS.gene061710.t1 AT3G57920 66.234 77 26 0 2 78 59 135 2.29e-26 112
MS.gene061710.t1 AT2G42200 62.195 82 31 0 2 83 74 155 2.73e-26 112
MS.gene061710.t1 AT1G27360 64.474 76 27 0 2 77 175 250 1.22e-25 110
MS.gene061710.t1 AT1G27360 64.474 76 27 0 2 77 175 250 1.22e-25 110
MS.gene061710.t1 AT1G27360 64.474 76 27 0 2 77 175 250 1.22e-25 110
MS.gene061710.t1 AT1G27360 64.474 76 27 0 2 77 175 250 1.22e-25 110
MS.gene061710.t1 AT1G02065 61.404 57 20 1 2 56 188 244 4.28e-15 76.6

Find 219 sgRNAs with CRISPR-Local

Find 368 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGGAGCATGAACATAATTT+TGG 0.128013 1.3:+19422200 MS.gene061710:CDS
ATCCCTCTTGATCTCTTTAA+AGG 0.178781 1.3:+19420542 MS.gene061710:CDS
GAATCAGGTTGCTGCTAATT+TGG 0.209506 1.3:+19418916 MS.gene061710:CDS
ATAACTCAGATTCTGATTTC+TGG 0.211467 1.3:+19421260 MS.gene061710:CDS
ACCTGTGTTCGCAGCGTTCC+TGG 0.222112 1.3:-19420874 None:intergenic
GGAAGATTTCTTGTTTATTC+TGG 0.246345 1.3:+19421289 MS.gene061710:CDS
TGTACAAGCTGTTCTTTATC+TGG 0.254859 1.3:-19419951 None:intergenic
CGGTGGAAATACATATTTCT+TGG 0.254936 1.3:-19422558 None:intergenic
AAAGCTTCTAAGGCTTTGTT+AGG 0.256564 1.3:+19418734 MS.gene061710:CDS
CCTGTTGTGGAGATGAATTT+TGG 0.281003 1.3:+19420419 MS.gene061710:CDS
TTGTCTATCGGAACGTTTAC+GGG 0.284257 1.3:-19423442 None:intergenic
AGGTTCGCCGCCGTTGAATC+AGG 0.312918 1.3:+19418901 MS.gene061710:CDS
TTTGTCTATCGGAACGTTTA+CGG 0.314407 1.3:-19423443 None:intergenic
GATGCATAACCAGCTTTAAA+TGG 0.316842 1.3:-19420614 None:intergenic
TAGGCTCAGTTTCTCCCTTC+AGG 0.321487 1.3:+19423718 MS.gene061710:intron
AATACATCTCCTAGTGTTCT+AGG 0.322030 1.3:+19421897 MS.gene061710:CDS
GTTTGTGAACAGGTTGAAAA+TGG 0.322272 1.3:+19422065 MS.gene061710:intron
TTCAATGTCTTCTGCTGCTT+GGG 0.324534 1.3:+19421105 MS.gene061710:CDS
CATGTTGGTCAAAACCCTTC+TGG 0.329211 1.3:+19422376 MS.gene061710:CDS
AGCTAGCATCGAATGAATAA+AGG 0.329929 1.3:-19423643 None:intergenic
CTGAGTATCTGAATTCAAAC+TGG 0.331636 1.3:-19420660 None:intergenic
CCATCAACACCTGCTCAAAA+TGG 0.333813 1.3:+19420164 MS.gene061710:CDS
ATTTGGAGGCCATGCAAATA+AGG 0.340733 1.3:+19420490 MS.gene061710:CDS
TAAAGCTGGTTATGCATCTT+CGG 0.346795 1.3:+19420619 MS.gene061710:CDS
AAAGCTGGTTATGCATCTTC+GGG 0.352663 1.3:+19420620 MS.gene061710:CDS
AACTTCTGCAATTGCACACT+TGG 0.359955 1.3:-19423574 None:intergenic
CTTCAATGTCTTCTGCTGCT+TGG 0.362113 1.3:+19421104 MS.gene061710:CDS
TATACATCATCAGAAGTTAT+AGG 0.371060 1.3:+19421816 MS.gene061710:CDS
GATTCTGATTTCTGGAGAAA+TGG 0.374701 1.3:+19421268 MS.gene061710:CDS
AGCTCATAGTAAAGCTTCTA+AGG 0.376735 1.3:+19418724 MS.gene061710:CDS
CAAGAAAATCCTTAGTTAAC+GGG 0.380419 1.3:-19420124 None:intergenic
TGCAATTGCACACTTGGAAC+AGG 0.381293 1.3:-19423568 None:intergenic
GGTCTGCAAGGTAGTATTAG+AGG 0.381686 1.3:+19420440 MS.gene061710:CDS
TCCTTAGTTAACGGGGCAGG+GGG 0.382520 1.3:-19420116 None:intergenic
CGGTATTACTCCCTTGCATT+TGG 0.384111 1.3:+19422598 MS.gene061710:CDS
TGTAGATTGGGTTGAAGTGC+TGG 0.386202 1.3:+19423337 MS.gene061710:intron
AGGAGGGTGAAGTTTGCATT+TGG 0.388943 1.3:-19420061 None:intergenic
TGAACCGGAAAATCTTCTTT+TGG 0.396112 1.3:-19423601 None:intergenic
GAAGGAGAAGGGTTGTCAAC+AGG 0.403420 1.3:+19422422 MS.gene061710:CDS
TCCCTCTTGATCTCTTTAAA+GGG 0.403698 1.3:+19420543 MS.gene061710:CDS
TGGCAATCTGAATCATCATT+TGG 0.407162 1.3:-19420251 None:intergenic
GGCTAGTTTCCTTATTTGCA+TGG 0.408999 1.3:-19420499 None:intergenic
ATCCTTAGTTAACGGGGCAG+GGG 0.412793 1.3:-19420117 None:intergenic
CTTAGTTAACGGGGCAGGGG+GGG 0.416027 1.3:-19420114 None:intergenic
GGAGACTTCTATTTCATTGA+AGG 0.416715 1.3:+19421655 MS.gene061710:CDS
CCAAAATTCATCTCCACAAC+AGG 0.417568 1.3:-19420419 None:intergenic
CTGCTCAAAATGGCGGCAAC+GGG 0.422761 1.3:+19420174 MS.gene061710:CDS
CGCGAAGATGGCAATTTCGA+TGG 0.423095 1.3:-19420335 None:intergenic
GAAACCCTTGTGGATGAAAA+CGG 0.423968 1.3:+19423360 MS.gene061710:CDS
CAGTAAGATCAGCGGGTAAA+GGG 0.424392 1.3:-19419989 None:intergenic
GGATTATCATCGACGTCATA+AGG 0.425815 1.3:+19418694 MS.gene061710:CDS
ATTAGCTCAATTCCCGGTGA+TGG 0.428300 1.3:-19423507 None:intergenic
GTTGATATCAGTGTCTCCTT+TGG 0.429670 1.3:+19421616 MS.gene061710:CDS
TTAACCAAGTCAAACGAGTT+GGG 0.434205 1.3:+19423541 MS.gene061710:CDS
ATTAGAGGTCTCAATTCTAA+TGG 0.436493 1.3:+19420455 MS.gene061710:CDS
CTCCTTGCAAATGGATGCAT+TGG 0.437114 1.3:-19422120 None:intergenic
CAAAGCCTCATCCCTTGACT+TGG 0.437901 1.3:-19422228 None:intergenic
TTCGCAGCGTTCCTGGGAAA+TGG 0.438881 1.3:-19420867 None:intergenic
TGATCTTACTGCAAAATTGC+TGG 0.439137 1.3:+19420001 MS.gene061710:CDS
CGGTCTCAACTCCTTGCAAA+TGG 0.440421 1.3:-19422129 None:intergenic
GTGTCTCCTTTGGCAATTGT+CGG 0.441124 1.3:+19421626 MS.gene061710:CDS
ATGTTCATGCTCCTCTGAAA+TGG 0.441547 1.3:-19422192 None:intergenic
AAATCCTTAGTTAACGGGGC+AGG 0.442282 1.3:-19420119 None:intergenic
CCGGATGAAGTGGCGGTTGG+AGG 0.443148 1.3:+19418881 MS.gene061710:CDS
TCACTGCTCTATTTAGAAGT+TGG 0.443446 1.3:-19422469 None:intergenic
GTGAAGCCAGCTCCGTGAAC+CGG 0.444837 1.3:-19423616 None:intergenic
TTCCAGATTATTCGCTCGAC+AGG 0.447389 1.3:+19422312 MS.gene061710:CDS
CCACCGAATCTTGAGGGCCC+TGG 0.449842 1.3:+19422575 MS.gene061710:CDS
TTGATCATCGCGATGATGAT+AGG 0.450695 1.3:-19420081 None:intergenic
CCTCCAACCGCCACTTCATC+CGG 0.453273 1.3:-19418881 None:intergenic
TCATCAGAAGTTATAGGATC+AGG 0.457883 1.3:+19421822 MS.gene061710:CDS
GCAGTAAGATCAGCGGGTAA+AGG 0.460954 1.3:-19419990 None:intergenic
CCTGTGTTCGCAGCGTTCCT+GGG 0.462026 1.3:-19420873 None:intergenic
GGAGACTTGCTGGTCATAAT+CGG 0.463432 1.3:+19418840 MS.gene061710:CDS
GGTTCACGGAGCTGGCTTCA+CGG 0.463735 1.3:+19423618 MS.gene061710:CDS
AATCCTTAGTTAACGGGGCA+GGG 0.464494 1.3:-19420118 None:intergenic
TTTGGCAATTGTCGGTGGAC+AGG 0.466662 1.3:+19421634 MS.gene061710:CDS
ACAGGTTGAAAATGGTTTCA+AGG 0.467248 1.3:+19422073 MS.gene061710:intron
AGTTGTAGACGGAGACTTGC+TGG 0.469042 1.3:+19418830 MS.gene061710:CDS
GCAAGAAAATCCTTAGTTAA+CGG 0.472350 1.3:-19420125 None:intergenic
GATGCATTGGCTATTATCAC+TGG 0.472801 1.3:-19422107 None:intergenic
AGCTTGGTTGGCTGTTTCAA+AGG 0.474571 1.3:+19422264 MS.gene061710:CDS
CCGCCAGGGCCCTCAAGATT+CGG 0.474979 1.3:-19422578 None:intergenic
CAAAGTGCACCATTTAAAGC+TGG 0.476563 1.3:+19420605 MS.gene061710:CDS
AGAGTGATTATTTCTCATCA+TGG 0.481408 1.3:-19423403 None:intergenic
ACATTGAAGCATAAATTGAT+AGG 0.482024 1.3:-19421090 None:intergenic
AACTTCACTTCTTTGTCTAT+CGG 0.482737 1.3:-19423454 None:intergenic
TAATCACTCTTATAATATGT+TGG 0.482765 1.3:+19423416 MS.gene061710:CDS
TAGGAAAATTTGAGGAAAGA+AGG 0.485472 1.3:+19419919 MS.gene061710:intron
GCTAGCATCGAATGAATAAA+GGG 0.487739 1.3:-19423642 None:intergenic
CAGGTTGAAAATGGTTTCAA+GGG 0.489945 1.3:+19422074 MS.gene061710:intron
CCTGCTCAAAATGGCGGCAA+CGG 0.490644 1.3:+19420173 MS.gene061710:CDS
GTCTTCATCTCCTCCTGTTG+TGG 0.490783 1.3:+19420406 MS.gene061710:CDS
GCTATTGCTGATGGTTCTCA+AGG 0.494096 1.3:+19418959 MS.gene061710:CDS
TAGTAGTACAACTATGACTT+TGG 0.494147 1.3:-19420520 None:intergenic
AAATGATGATTCAGATTGCC+AGG 0.494257 1.3:+19420253 MS.gene061710:CDS
AACCTGTCGAGCGAATAATC+TGG 0.495792 1.3:-19422314 None:intergenic
GTATTCCTACAGGATCGTAC+TGG 0.496322 1.3:+19420808 MS.gene061710:intron
CAGTTTGAATTCAGATACTC+AGG 0.496563 1.3:+19420661 MS.gene061710:CDS
TTGTTGACTGCTATTGCTGA+TGG 0.498169 1.3:+19418950 MS.gene061710:CDS
TGCAAGGGAGTAATACCGCC+AGG 0.498402 1.3:-19422593 None:intergenic
ATCAGTACTAACTTTGTGCC+AGG 0.499084 1.3:-19421695 None:intergenic
TGGAGTTTGATGAAGGAAAA+CGG 0.499920 1.3:+19418807 MS.gene061710:CDS
CCTTAGTTAACGGGGCAGGG+GGG 0.499978 1.3:-19420115 None:intergenic
GTTATAGGATCAGGAGATCC+TGG 0.500739 1.3:+19421831 MS.gene061710:CDS
GTATTTCCACCGAATCTTGA+GGG 0.500756 1.3:+19422569 MS.gene061710:CDS
GATAAACACTTCGAAGGAGA+AGG 0.501550 1.3:+19422410 MS.gene061710:CDS
GGAAGAAACCTCTCTGCTCC+TGG 0.503311 1.3:+19421677 MS.gene061710:CDS
CAAAACCCTTCTGGATATGC+TGG 0.504184 1.3:+19422385 MS.gene061710:CDS
AAACCCTTGTGGATGAAAAC+GGG 0.509681 1.3:+19423361 MS.gene061710:CDS
ATTTAACTCGAACATCCTCC+TGG 0.512376 1.3:-19420271 None:intergenic
GCTTGGTTGGCTGTTTCAAA+GGG 0.514045 1.3:+19422265 MS.gene061710:CDS
TTCTACACGACCATCAGACT+TGG 0.514057 1.3:+19421039 MS.gene061710:CDS
AGCTTGTACAAATTCTGAAT+AGG 0.515245 1.3:+19419964 MS.gene061710:CDS
GACGGCGACCTTTCATCCAC+AGG 0.515983 1.3:-19420386 None:intergenic
AGCAGGTGTTGATGGAGTTG+TGG 0.516270 1.3:-19420156 None:intergenic
TGAGATAGAGCACCCATCAC+CGG 0.517584 1.3:+19423494 MS.gene061710:CDS
ATTATTTCTCATCATGGCAT+AGG 0.518702 1.3:-19423397 None:intergenic
CCGTTGGTGGAGTTTGATGA+AGG 0.518926 1.3:+19418800 MS.gene061710:CDS
CTCTTTAACAAATGATCCAC+AGG 0.520008 1.3:+19422655 MS.gene061710:CDS
GTTGGCTGTTTCAAAGGGAA+AGG 0.520420 1.3:+19422270 MS.gene061710:CDS
ATATTGTATAGGAAAATTTG+AGG 0.522913 1.3:+19419911 MS.gene061710:intron
GCGAAGATGGCAATTTCGAT+GGG 0.523216 1.3:-19420334 None:intergenic
AATTGATAGGACAACACAGC+CGG 0.530262 1.3:-19421077 None:intergenic
GCTCAGTTTCTCCCTTCAGG+TGG 0.530619 1.3:+19423721 MS.gene061710:CDS
AGCATCTACAACGGATTCTG+AGG 0.530622 1.3:+19422622 MS.gene061710:CDS
AGTCCCCAACTCGTTTGACT+TGG 0.531710 1.3:-19423545 None:intergenic
GAAAACGCAGCCGGATGAAG+TGG 0.533996 1.3:+19418871 MS.gene061710:CDS
AAGCTTCTAAGGCTTTGTTA+GGG 0.535780 1.3:+19418735 MS.gene061710:CDS
CATATGATCTGCACTACTTG+TGG 0.536193 1.3:-19420198 None:intergenic
CAGCCGGATGAAGTGGCGGT+TGG 0.536524 1.3:+19418878 MS.gene061710:CDS
TCTAGGTCGCTGTTTCATTG+AGG 0.538184 1.3:+19421914 MS.gene061710:CDS
CCTTCATCAAACTCCACCAA+CGG 0.538649 1.3:-19418800 None:intergenic
GCGTCGGAGGAAAACGCAGC+CGG 0.543520 1.3:+19418862 MS.gene061710:CDS
GAGATAGAGCACCCATCACC+GGG 0.544324 1.3:+19423495 MS.gene061710:CDS
TTAGCTCAATTCCCGGTGAT+GGG 0.545019 1.3:-19423506 None:intergenic
ACTGCAAAATTGCTGGATGT+TGG 0.546561 1.3:+19420008 MS.gene061710:CDS
GATACGCATGTGCAAACCAT+GGG 0.547058 1.3:+19421574 MS.gene061710:CDS
GTGTAGTAGGTTTCATCCGT+TGG 0.548903 1.3:+19418784 MS.gene061710:CDS
CTGGTCATAATCGGCGTCGG+AGG 0.551550 1.3:+19418849 MS.gene061710:CDS
ATCTCATCATAGACCATACC+AGG 0.551607 1.3:-19421849 None:intergenic
ATTAACCAAGTCAAACGAGT+TGG 0.553160 1.3:+19423540 MS.gene061710:CDS
GTAGTAATCCTGTGGATGAA+AGG 0.553754 1.3:+19420378 MS.gene061710:CDS
TCTCCTTTGGCAATTGTCGG+TGG 0.554427 1.3:+19421629 MS.gene061710:CDS
AAAGCCTCATCCCTTGACTT+GGG 0.557399 1.3:-19422227 None:intergenic
TGTATTTCCACCGAATCTTG+AGG 0.558800 1.3:+19422568 MS.gene061710:CDS
GACCCTTTAAAGAGATCAAG+AGG 0.558852 1.3:-19420545 None:intergenic
GGGGAAATATTTACCTCCTG+TGG 0.559338 1.3:-19422671 None:intergenic
CAGACTTGGAGAGTTACATA+AGG 0.560965 1.3:+19421053 MS.gene061710:CDS
GGAGACCTCCACGTTCCCCA+TGG 0.566104 1.3:-19421590 None:intergenic
CCCAGGAACGCTGCGAACAC+AGG 0.566597 1.3:+19420873 MS.gene061710:CDS
TTGGAGAGTTACATAAGGCC+CGG 0.568740 1.3:+19421058 MS.gene061710:CDS
AGCGTTCCTGGGAAATGGCT+AGG 0.570204 1.3:-19420862 None:intergenic
TGTAGATGCTGCCAAATGCA+AGG 0.571013 1.3:-19422609 None:intergenic
GAGACTTCTATTTCATTGAA+GGG 0.571706 1.3:+19421656 MS.gene061710:CDS
GGAGACACTGATATCAACTC+TGG 0.573695 1.3:-19421611 None:intergenic
AGGGTTGTCAACAGGGTCAG+TGG 0.575519 1.3:+19422430 MS.gene061710:CDS
GAGGCCCAAGTCAAGGGATG+AGG 0.576270 1.3:+19422223 MS.gene061710:CDS
ATTGATAGGACAACACAGCC+GGG 0.579359 1.3:-19421076 None:intergenic
ATAAACACTTCGAAGGAGAA+GGG 0.579651 1.3:+19422411 MS.gene061710:CDS
CAGTTAGCATCACACAAAGA+TGG 0.584117 1.3:+19421316 MS.gene061710:CDS
ATCAACCAGCATATCCAGAA+GGG 0.585277 1.3:-19422390 None:intergenic
AAGGAGAAGGGTTGTCAACA+GGG 0.587471 1.3:+19422423 MS.gene061710:CDS
ATGTAACTCTCCAAGTCTGA+TGG 0.588830 1.3:-19421049 None:intergenic
TAGTAGGTTTCATCCGTTGG+TGG 0.589116 1.3:+19418787 MS.gene061710:CDS
TGTTAGGGAATCAAATGCAA+CGG 0.593606 1.3:+19418750 MS.gene061710:CDS
CTCAGTTTCTCCCTTCAGGT+GGG 0.594092 1.3:+19423722 MS.gene061710:CDS
TATCAACCAGCATATCCAGA+AGG 0.595870 1.3:-19422391 None:intergenic
AAGCATCCTAGCCATTTCCC+AGG 0.599845 1.3:+19420856 MS.gene061710:CDS
GAAAAGAAAGTGCACAAGCA+TGG 0.600104 1.3:+19422490 MS.gene061710:CDS
ATCATCGCGATGATGATAGG+AGG 0.601669 1.3:-19420078 None:intergenic
AGCCAATGCATCCATTTGCA+AGG 0.602317 1.3:+19422118 MS.gene061710:CDS
CCAGGGCCCTCAAGATTCGG+TGG 0.602415 1.3:-19422575 None:intergenic
AGAAGATCTATCAAAAGCGA+AGG 0.602873 1.3:+19418673 MS.gene061710:CDS
CAGTTATCAACTTGACACAT+CGG 0.602997 1.3:-19418647 None:intergenic
AACGCAGCCGGATGAAGTGG+CGG 0.604112 1.3:+19418874 MS.gene061710:CDS
ATTTGTACTGACGTTTGCTG+TGG 0.605130 1.3:+19422340 MS.gene061710:CDS
TATTCCTACAGGATCGTACT+GGG 0.605655 1.3:+19420809 MS.gene061710:intron
TAACCAAGTCAAACGAGTTG+GGG 0.607095 1.3:+19423542 MS.gene061710:CDS
GTAGATTGGGTTGAAGTGCT+GGG 0.609912 1.3:+19423338 MS.gene061710:intron
CATATGAGAGAAAGAAGCAG+TGG 0.610257 1.3:+19420215 MS.gene061710:CDS
CCGAATCTTGAGGGCCCTGG+CGG 0.610502 1.3:+19422578 MS.gene061710:CDS
AAGGAAAACGGAGTTGTAGA+CGG 0.611269 1.3:+19418819 MS.gene061710:CDS
CTGGTTGATAAACACTTCGA+AGG 0.611547 1.3:+19422404 MS.gene061710:CDS
AAACAGCGACCTAGAACACT+AGG 0.611826 1.3:-19421906 None:intergenic
ATCGGAAAGTAGTAATCCTG+TGG 0.613254 1.3:+19420370 MS.gene061710:CDS
TTAGCAGCAACCTGATTCAA+CGG 0.616434 1.3:-19418911 None:intergenic
GAATTAAAGAATCAACACGT+TGG 0.617872 1.3:-19421237 None:intergenic
TCGTCAAATTCAGACTCAAG+CGG 0.618525 1.3:-19422149 None:intergenic
GGATACGCATGTGCAAACCA+TGG 0.620975 1.3:+19421573 MS.gene061710:CDS
TATGATGAGATAAAATTGAG+TGG 0.621764 1.3:+19421861 MS.gene061710:CDS
CTCATCATGGCATAGGCATG+TGG 0.622626 1.3:-19423390 None:intergenic
TGTGCAAACCATGGGGAACG+TGG 0.625779 1.3:+19421582 MS.gene061710:CDS
GTAGATGCTGCCAAATGCAA+GGG 0.626471 1.3:-19422608 None:intergenic
AAATTCATCTCCACAACAGG+AGG 0.631154 1.3:-19420416 None:intergenic
AGGATCAGGAGATCCTGGTA+TGG 0.632079 1.3:+19421836 MS.gene061710:CDS
GATGTGTGATGCCATTTCAG+AGG 0.633081 1.3:+19422181 MS.gene061710:CDS
GCATTTGGCAGCATCTACAA+CGG 0.637611 1.3:+19422613 MS.gene061710:CDS
TGAGTATCTGAATTCAAACT+GGG 0.640355 1.3:-19420659 None:intergenic
ACAACAGGAGGAGATGAAGA+CGG 0.642019 1.3:-19420404 None:intergenic
TTGCTGGTCATAATCGGCGT+CGG 0.649273 1.3:+19418846 MS.gene061710:CDS
TCATCGCGATGATGATAGGA+GGG 0.651428 1.3:-19420077 None:intergenic
AAGAAAATCCTTAGTTAACG+GGG 0.660888 1.3:-19420123 None:intergenic
ACCCTTTAAAGAGATCAAGA+GGG 0.661561 1.3:-19420544 None:intergenic
GCAAGGGAGTAATACCGCCA+GGG 0.662761 1.3:-19422592 None:intergenic
GCATCTACAACGGATTCTGA+GGG 0.663873 1.3:+19422623 MS.gene061710:CDS
TCAACACCTGCTCAAAATGG+CGG 0.675936 1.3:+19420167 MS.gene061710:CDS
TGTCCACCGACAATTGCCAA+AGG 0.680091 1.3:-19421632 None:intergenic
GGAAAGAAACTGTTGCATGT+TGG 0.681755 1.3:+19422361 MS.gene061710:CDS
GCTTGAGTCTGAATTTGACG+AGG 0.690205 1.3:+19422151 MS.gene061710:CDS
AAGGTTCTCGAATGTGAACG+AGG 0.693475 1.3:+19422289 MS.gene061710:CDS
GTATCTGAATTCAAACTGGG+AGG 0.694347 1.3:-19420656 None:intergenic
TTTAACAAATGATCCACAGG+AGG 0.702723 1.3:+19422658 MS.gene061710:CDS
GCAAACCATGGGGAACGTGG+AGG 0.714807 1.3:+19421585 MS.gene061710:CDS
ATACGCATGTGCAAACCATG+GGG 0.741686 1.3:+19421575 MS.gene061710:CDS
ACTTTGTGCCAGGAGCAGAG+AGG 0.743535 1.3:-19421685 None:intergenic
GCAGCAACCTGATTCAACGG+CGG 0.745706 1.3:-19418908 None:intergenic
TGATGATTCAGATTGCCAGG+AGG 0.754316 1.3:+19420256 MS.gene061710:CDS
GAAGTGCTGGGAAACCCTTG+TGG 0.767474 1.3:+19423350 MS.gene061710:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTTTTTTTTTTTTTTTGAA+AGG + chr1.3:19418993-19419012 MS.gene061710:intron 10.0%
!! TCAAAGTAAATAACAATTAA+GGG - chr1.3:19419403-19419422 None:intergenic 15.0%
!! TCCTTCAAAAAAAAAATTAA+GGG - chr1.3:19419372-19419391 None:intergenic 15.0%
!! TTCAAAGTAAATAACAATTA+AGG - chr1.3:19419404-19419423 None:intergenic 15.0%
!!! AGTAGTTTATATTACTATTT+TGG + chr1.3:19419076-19419095 MS.gene061710:intron 15.0%
!!! ATTTGAAACAAATATTTTGT+TGG + chr1.3:19419122-19419141 MS.gene061710:intron 15.0%
!!! ATTTTAAAACAAACTTTAGA+CGG + chr1.3:19421475-19421494 MS.gene061710:intron 15.0%
!!! TAGATTTAATTCTTTTATGT+AGG - chr1.3:19423100-19423119 None:intergenic 15.0%
!!! TTCTTATTCTTTTAATTAAG+AGG + chr1.3:19420744-19420763 MS.gene061710:intron 15.0%
!! AGTATCAAAAATAGTCTAAT+TGG + chr1.3:19422761-19422780 MS.gene061710:intron 20.0%
!! ATATTGTATAGGAAAATTTG+AGG + chr1.3:19419911-19419930 MS.gene061710:intron 20.0%
!! CTCCTTCAAAAAAAAAATTA+AGG - chr1.3:19419373-19419392 None:intergenic 20.0%
!! GGCTATTTAAATAAATTTGA+AGG + chr1.3:19422979-19422998 MS.gene061710:intron 20.0%
!! TAATAAAAATCTAGCTATGA+TGG - chr1.3:19421510-19421529 None:intergenic 20.0%
!! TAATCACTCTTATAATATGT+TGG + chr1.3:19423416-19423435 MS.gene061710:CDS 20.0%
!! TACACGAATATAAAAATATG+AGG - chr1.3:19421402-19421421 None:intergenic 20.0%
!!! CTTAATTTTTTTTTTGAAGG+AGG + chr1.3:19419371-19419390 MS.gene061710:intron 20.0%
!!! GATCACTTTTTTTTTATCTT+AGG + chr1.3:19421376-19421395 MS.gene061710:intron 20.0%
!!! GTTCTTTTATAGCTAAATTT+TGG + chr1.3:19419238-19419257 MS.gene061710:intron 20.0%
!!! TACTGATTTATATTCTAAGT+AGG - chr1.3:19423182-19423201 None:intergenic 20.0%
!!! TAGCTAGATTTTTATTATCA+AGG + chr1.3:19421513-19421532 MS.gene061710:intron 20.0%
!!! TGATGTCATTTTAATGAATA+TGG + chr1.3:19420940-19420959 MS.gene061710:intron 20.0%
!!! TTGGTTTGATTATATTGTAT+AGG + chr1.3:19419900-19419919 MS.gene061710:intron 20.0%
!!! TTTTATATTCGTGTAACTTT+TGG + chr1.3:19421407-19421426 MS.gene061710:intron 20.0%
!!! TTTTTTTTTTTGAAAGGTCA+AGG + chr1.3:19418999-19419018 MS.gene061710:intron 20.0%
!!! TTTTTTTTTTTTGTGGTGTT+AGG + chr1.3:19419285-19419304 MS.gene061710:intron 20.0%
! ACATTGAAGCATAAATTGAT+AGG - chr1.3:19421093-19421112 None:intergenic 25.0%
! CAAAATTGAGAATCTGATAA+AGG - chr1.3:19419651-19419670 None:intergenic 25.0%
! TAATCAACAATCCAATTACA+GGG - chr1.3:19421452-19421471 None:intergenic 25.0%
! TAGATTTAAACTGAAATTCC+AGG + chr1.3:19421548-19421567 MS.gene061710:intron 25.0%
! TATACATCATCAGAAGTTAT+AGG + chr1.3:19421816-19421835 MS.gene061710:CDS 25.0%
! TATGATGAGATAAAATTGAG+TGG + chr1.3:19421861-19421880 MS.gene061710:CDS 25.0%
! TTAAAACCCAAAAGACAAAA+TGG - chr1.3:19420775-19420794 None:intergenic 25.0%
! TTTGACAAAAAAGTTACTAG+AGG + chr1.3:19422699-19422718 MS.gene061710:intron 25.0%
!! AATTTTCGAAAATCGTTTCT+AGG + chr1.3:19419796-19419815 MS.gene061710:intron 25.0%
!!! AATTCTAATGGTATTTTGAC+TGG + chr1.3:19420467-19420486 MS.gene061710:CDS 25.0%
!!! AGTAACTTTTTTGTCAAAGT+AGG - chr1.3:19422697-19422716 None:intergenic 25.0%
!!! GAGTTTTTTTTATAGACAAG+TGG + chr1.3:19422878-19422897 MS.gene061710:intron 25.0%
!!! GCCCTTAATTTTTTTTTTGA+AGG + chr1.3:19419368-19419387 MS.gene061710:intron 25.0%
!!! GTAACTTTTTTGTCAAAGTA+GGG - chr1.3:19422696-19422715 None:intergenic 25.0%
!!! TAACTTTTTTGTCAAAGTAG+GGG - chr1.3:19422695-19422714 None:intergenic 25.0%
!!! TGTTTTTTCTTTTCTTGTGT+GGG + chr1.3:19419867-19419886 MS.gene061710:intron 25.0%
!!! TTGTTTTTTCTTTTCTTGTG+TGG + chr1.3:19419866-19419885 MS.gene061710:intron 25.0%
AAAATACAGACAAGAAGTCA+AGG - chr1.3:19423306-19423325 None:intergenic 30.0%
AACTTCACTTCTTTGTCTAT+CGG - chr1.3:19423457-19423476 None:intergenic 30.0%
AAGAAAATCCTTAGTTAACG+GGG - chr1.3:19420126-19420145 None:intergenic 30.0%
AATCAACAATCCAATTACAG+GGG - chr1.3:19421451-19421470 None:intergenic 30.0%
AATCCTAAGTTGTAGAGAAA+AGG - chr1.3:19423234-19423253 None:intergenic 30.0%
AATTCAGTAAATCCGAATGA+GGG - chr1.3:19422731-19422750 None:intergenic 30.0%
AGCCAATTGTAAATCTGAAA+AGG - chr1.3:19421019-19421038 None:intergenic 30.0%
AGCTTGTACAAATTCTGAAT+AGG + chr1.3:19419964-19419983 MS.gene061710:CDS 30.0%
ATAACTCAGATTCTGATTTC+TGG + chr1.3:19421260-19421279 MS.gene061710:CDS 30.0%
ATTAGAGGTCTCAATTCTAA+TGG + chr1.3:19420455-19420474 MS.gene061710:CDS 30.0%
CAAGAAAATCCTTAGTTAAC+GGG - chr1.3:19420127-19420146 None:intergenic 30.0%
CAATGAATCCTGCAAAATTT+AGG - chr1.3:19421780-19421799 None:intergenic 30.0%
GAATTAAAGAATCAACACGT+TGG - chr1.3:19421240-19421259 None:intergenic 30.0%
GAGACTTCTATTTCATTGAA+GGG + chr1.3:19421656-19421675 MS.gene061710:CDS 30.0%
GCAAGAAAATCCTTAGTTAA+CGG - chr1.3:19420128-19420147 None:intergenic 30.0%
GTAATCAACAATCCAATTAC+AGG - chr1.3:19421453-19421472 None:intergenic 30.0%
GTTGTCAAAAAGAAGAACAA+AGG + chr1.3:19423016-19423035 MS.gene061710:intron 30.0%
TAGGAAAATTTGAGGAAAGA+AGG + chr1.3:19419919-19419938 MS.gene061710:intron 30.0%
TAGTAGTACAACTATGACTT+TGG - chr1.3:19420523-19420542 None:intergenic 30.0%
TCAGTAGTTATCATGTTGTT+TGG + chr1.3:19423196-19423215 MS.gene061710:intron 30.0%
TGAGTATCTGAATTCAAACT+GGG - chr1.3:19420662-19420681 None:intergenic 30.0%
TTAAACCCCATAAAAACCAT+AGG - chr1.3:19422791-19422810 None:intergenic 30.0%
TTTAAACTGAAATTCCAGGA+AGG + chr1.3:19421552-19421571 MS.gene061710:intron 30.0%
! AGAGTGATTATTTCTCATCA+TGG - chr1.3:19423406-19423425 None:intergenic 30.0%
! ATTATTTCTCATCATGGCAT+AGG - chr1.3:19423400-19423419 None:intergenic 30.0%
! CCCATTAATATTTTGCGAAT+CGG + chr1.3:19420916-19420935 MS.gene061710:intron 30.0%
! CCGATTCGCAAAATATTAAT+GGG - chr1.3:19420919-19420938 None:intergenic 30.0%
! GGAAGATTTCTTGTTTATTC+TGG + chr1.3:19421289-19421308 MS.gene061710:CDS 30.0%
! GGTTTTTATGGGGTTTAAAT+AGG + chr1.3:19422793-19422812 MS.gene061710:intron 30.0%
! GTCCTTTTCAGATTTACAAT+TGG + chr1.3:19421014-19421033 MS.gene061710:intron 30.0%
! TATATTCGTGTAACTTTTGG+AGG + chr1.3:19421410-19421429 MS.gene061710:intron 30.0%
! TCCGATTCGCAAAATATTAA+TGG - chr1.3:19420920-19420939 None:intergenic 30.0%
!! AGGAGCATGAACATAATTTT+GGG + chr1.3:19422201-19422220 MS.gene061710:CDS 30.0%
!! CAAGGTTTGGTTTCTATTTT+TGG + chr1.3:19419017-19419036 MS.gene061710:intron 30.0%
!! GACATACTTTAAGGTTGATA+AGG - chr1.3:19423151-19423170 None:intergenic 30.0%
!! GGGTTTTAATCTATTTGTGA+TGG + chr1.3:19420786-19420805 MS.gene061710:intron 30.0%
!!! AACTTTTTTGTCAAAGTAGG+GGG - chr1.3:19422694-19422713 None:intergenic 30.0%
!!! AATGGTATTTTGACTGGATT+TGG + chr1.3:19420473-19420492 MS.gene061710:CDS 30.0%
!!! CTTGTCTGTATTTTTTATGC+TGG + chr1.3:19423312-19423331 MS.gene061710:intron 30.0%
!!! TTCGCGAAAGTATTTTTCAT+CGG + chr1.3:19420352-19420371 MS.gene061710:CDS 30.0%
!!! TTTTTTGAAAGGTCAAGGTT+TGG + chr1.3:19419004-19419023 MS.gene061710:intron 30.0%
AAAAAAACTCTGACACAGTC+TGG - chr1.3:19422868-19422887 None:intergenic 35.0%
AAATGATGATTCAGATTGCC+AGG + chr1.3:19420253-19420272 MS.gene061710:CDS 35.0%
AATACATCTCCTAGTGTTCT+AGG + chr1.3:19421897-19421916 MS.gene061710:CDS 35.0%
AGAAGATCTATCAAAAGCGA+AGG + chr1.3:19418673-19418692 MS.gene061710:CDS 35.0%
AGCTCATAGTAAAGCTTCTA+AGG + chr1.3:19418724-19418743 MS.gene061710:CDS 35.0%
ATAAACACTTCGAAGGAGAA+GGG + chr1.3:19422411-19422430 MS.gene061710:CDS 35.0%
ATAACACAACGTCCAGAAAA+GGG - chr1.3:19421725-19421744 None:intergenic 35.0%
ATATTCTAAGTAGGCTGACA+AGG - chr1.3:19423173-19423192 None:intergenic 35.0%
ATCAACAATCCAATTACAGG+GGG - chr1.3:19421450-19421469 None:intergenic 35.0%
ATCCCTCTTGATCTCTTTAA+AGG + chr1.3:19420542-19420561 MS.gene061710:CDS 35.0%
ATTAACCAAGTCAAACGAGT+TGG + chr1.3:19423540-19423559 MS.gene061710:CDS 35.0%
ATTTGTGATGGTATTCCTAC+AGG + chr1.3:19420798-19420817 MS.gene061710:intron 35.0%
CAACTTACATGTTTGTGAAC+AGG + chr1.3:19422055-19422074 MS.gene061710:intron 35.0%
CAATATGCAAGTAATCAGCA+AGG - chr1.3:19421187-19421206 None:intergenic 35.0%
CAATTCAGTAAATCCGAATG+AGG - chr1.3:19422732-19422751 None:intergenic 35.0%
CAGTTTGAATTCAGATACTC+AGG + chr1.3:19420661-19420680 MS.gene061710:CDS 35.0%
CGGTGGAAATACATATTTCT+TGG - chr1.3:19422561-19422580 None:intergenic 35.0%
CTCTTTAACAAATGATCCAC+AGG + chr1.3:19422655-19422674 MS.gene061710:CDS 35.0%
CTGAGTATCTGAATTCAAAC+TGG - chr1.3:19420663-19420682 None:intergenic 35.0%
GAAAAATACTTTCGCGAAGA+TGG - chr1.3:19420350-19420369 None:intergenic 35.0%
GGAGACTTCTATTTCATTGA+AGG + chr1.3:19421655-19421674 MS.gene061710:CDS 35.0%
TAAAGCTGGTTATGCATCTT+CGG + chr1.3:19420619-19420638 MS.gene061710:CDS 35.0%
TAGTCTAATTGGATTGCCTA+TGG + chr1.3:19422772-19422791 MS.gene061710:intron 35.0%
TCACTGCTCTATTTAGAAGT+TGG - chr1.3:19422472-19422491 None:intergenic 35.0%
TCATCAGAAGTTATAGGATC+AGG + chr1.3:19421822-19421841 MS.gene061710:CDS 35.0%
TCCCTCTTGATCTCTTTAAA+GGG + chr1.3:19420543-19420562 MS.gene061710:CDS 35.0%
TGAATTCAGATACTCAGGTT+GGG + chr1.3:19420666-19420685 MS.gene061710:intron 35.0%
TGATCTTACTGCAAAATTGC+TGG + chr1.3:19420001-19420020 MS.gene061710:CDS 35.0%
TGGAGTTTGATGAAGGAAAA+CGG + chr1.3:19418807-19418826 MS.gene061710:CDS 35.0%
TGGCAATCTGAATCATCATT+TGG - chr1.3:19420254-19420273 None:intergenic 35.0%
TGTACAAGCTGTTCTTTATC+TGG - chr1.3:19419954-19419973 None:intergenic 35.0%
TGTTAGGGAATCAAATGCAA+CGG + chr1.3:19418750-19418769 MS.gene061710:CDS 35.0%
TTAACCAAGTCAAACGAGTT+GGG + chr1.3:19423541-19423560 MS.gene061710:CDS 35.0%
TTGAATTCAGATACTCAGGT+TGG + chr1.3:19420665-19420684 MS.gene061710:intron 35.0%
TTTAAATAGCCAAGCCTGTT+AGG - chr1.3:19422970-19422989 None:intergenic 35.0%
TTTAACAAATGATCCACAGG+AGG + chr1.3:19422658-19422677 MS.gene061710:CDS 35.0%
TTTATGCTGGTGTGTAGATT+GGG + chr1.3:19423325-19423344 MS.gene061710:intron 35.0%
TTTGTCTATCGGAACGTTTA+CGG - chr1.3:19423446-19423465 None:intergenic 35.0%
! AAAGAAGATTTTCCGGTTCA+CGG + chr1.3:19423604-19423623 MS.gene061710:CDS 35.0%
! AATTTTGCAGTAAGATCAGC+GGG - chr1.3:19419999-19420018 None:intergenic 35.0%
! ACAGGTTGAAAATGGTTTCA+AGG + chr1.3:19422073-19422092 MS.gene061710:intron 35.0%
! ACCCTTTAAAGAGATCAAGA+GGG - chr1.3:19420547-19420566 None:intergenic 35.0%
! ACTTTTTGAATGAGCTTGGT+TGG + chr1.3:19422252-19422271 MS.gene061710:CDS 35.0%
! AGCATGAACATAATTTTGGG+AGG + chr1.3:19422204-19422223 MS.gene061710:CDS 35.0%
! AGCTAGCATCGAATGAATAA+AGG - chr1.3:19423646-19423665 None:intergenic 35.0%
! CAATTTTGCAGTAAGATCAG+CGG - chr1.3:19420000-19420019 None:intergenic 35.0%
! CAGGTTGAAAATGGTTTCAA+GGG + chr1.3:19422074-19422093 MS.gene061710:intron 35.0%
! CATCCTTTTCTCTACAACTT+AGG + chr1.3:19423228-19423247 MS.gene061710:intron 35.0%
! CTGTTTGTCCTAAATTTTGC+AGG + chr1.3:19421769-19421788 MS.gene061710:intron 35.0%
! GATTCTGATTTCTGGAGAAA+TGG + chr1.3:19421268-19421287 MS.gene061710:CDS 35.0%
! GATTGCCTATGGTTTTTATG+GGG + chr1.3:19422783-19422802 MS.gene061710:intron 35.0%
! GCTAGCATCGAATGAATAAA+GGG - chr1.3:19423645-19423664 None:intergenic 35.0%
! GGATTGCCTATGGTTTTTAT+GGG + chr1.3:19422782-19422801 MS.gene061710:intron 35.0%
! GTTTGTGAACAGGTTGAAAA+TGG + chr1.3:19422065-19422084 MS.gene061710:intron 35.0%
! TGAACCGGAAAATCTTCTTT+TGG - chr1.3:19423604-19423623 None:intergenic 35.0%
! TGGATTGCCTATGGTTTTTA+TGG + chr1.3:19422781-19422800 MS.gene061710:intron 35.0%
! TTGTGTGGGCTAATATTGTT+TGG + chr1.3:19419881-19419900 MS.gene061710:intron 35.0%
! TTTTATGCTGGTGTGTAGAT+TGG + chr1.3:19423324-19423343 MS.gene061710:intron 35.0%
! TTTTGCATTAGCTCAATTCC+CGG - chr1.3:19423516-19423535 None:intergenic 35.0%
!! AAAGCTTCTAAGGCTTTGTT+AGG + chr1.3:19418734-19418753 MS.gene061710:CDS 35.0%
!! AAGCTTCTAAGGCTTTGTTA+GGG + chr1.3:19418735-19418754 MS.gene061710:CDS 35.0%
!! GAGGAGCATGAACATAATTT+TGG + chr1.3:19422200-19422219 MS.gene061710:CDS 35.0%
!! GATGCATAACCAGCTTTAAA+TGG - chr1.3:19420617-19420636 None:intergenic 35.0%
!! GCTTAGCCATTTTGTCTTTT+GGG + chr1.3:19420766-19420785 MS.gene061710:intron 35.0%
!! TTGCACTTTTTGAATGAGCT+TGG + chr1.3:19422248-19422267 MS.gene061710:CDS 35.0%
!!! ACTTTTTTGTCAAAGTAGGG+GGG - chr1.3:19422693-19422712 None:intergenic 35.0%
!!! GACTAGTTTTGATTTCTGAC+TGG + chr1.3:19421349-19421368 MS.gene061710:intron 35.0%
AAACCCTTGTGGATGAAAAC+GGG + chr1.3:19423361-19423380 MS.gene061710:CDS 40.0%
AAAGCTGGTTATGCATCTTC+GGG + chr1.3:19420620-19420639 MS.gene061710:CDS 40.0%
AAATTCATCTCCACAACAGG+AGG - chr1.3:19420419-19420438 None:intergenic 40.0%
AACTTCTGCAATTGCACACT+TGG - chr1.3:19423577-19423596 None:intergenic 40.0%
AAGGAAAACGGAGTTGTAGA+CGG + chr1.3:19418819-19418838 MS.gene061710:CDS 40.0%
AATTGATAGGACAACACAGC+CGG - chr1.3:19421080-19421099 None:intergenic 40.0%
ACTGCAAAATTGCTGGATGT+TGG + chr1.3:19420008-19420027 MS.gene061710:CDS 40.0%
ACTGCACATGATTACTGTGA+TGG + chr1.3:19421957-19421976 MS.gene061710:intron 40.0%
AGAAACTGAGCCTACATAAG+GGG - chr1.3:19423712-19423731 None:intergenic 40.0%
AGTCTGGCCTAACATATACT+AGG - chr1.3:19422852-19422871 None:intergenic 40.0%
ATCAACCAGCATATCCAGAA+GGG - chr1.3:19422393-19422412 None:intergenic 40.0%
ATCAGTACTAACTTTGTGCC+AGG - chr1.3:19421698-19421717 None:intergenic 40.0%
ATCGGAAAGTAGTAATCCTG+TGG + chr1.3:19420370-19420389 MS.gene061710:CDS 40.0%
ATCTCATCATAGACCATACC+AGG - chr1.3:19421852-19421871 None:intergenic 40.0%
ATGTAACTCTCCAAGTCTGA+TGG - chr1.3:19421052-19421071 None:intergenic 40.0%
ATTCAAAGCAAGCATGAACC+AGG - chr1.3:19420703-19420722 None:intergenic 40.0%
ATTTAACTCGAACATCCTCC+TGG - chr1.3:19420274-19420293 None:intergenic 40.0%
ATTTGGAGGCCATGCAAATA+AGG + chr1.3:19420490-19420509 MS.gene061710:CDS 40.0%
CAGACTTGGAGAGTTACATA+AGG + chr1.3:19421053-19421072 MS.gene061710:CDS 40.0%
CAGTTAGCATCACACAAAGA+TGG + chr1.3:19421316-19421335 MS.gene061710:CDS 40.0%
CATAACACAACGTCCAGAAA+AGG - chr1.3:19421726-19421745 None:intergenic 40.0%
CATATGAGAGAAAGAAGCAG+TGG + chr1.3:19420215-19420234 MS.gene061710:CDS 40.0%
CATATGATCTGCACTACTTG+TGG - chr1.3:19420201-19420220 None:intergenic 40.0%
CCAAAATTCATCTCCACAAC+AGG - chr1.3:19420422-19420441 None:intergenic 40.0%
CCTAACATATACTAGGCAGT+AGG - chr1.3:19422845-19422864 None:intergenic 40.0%
CCTACTGCCTAGTATATGTT+AGG + chr1.3:19422842-19422861 MS.gene061710:intron 40.0%
CGTTGTGTTATGCTTCTTTC+TGG + chr1.3:19421734-19421753 MS.gene061710:intron 40.0%
GAAACCCTTGTGGATGAAAA+CGG + chr1.3:19423360-19423379 MS.gene061710:CDS 40.0%
GAGAAACTGAGCCTACATAA+GGG - chr1.3:19423713-19423732 None:intergenic 40.0%
GATAAACACTTCGAAGGAGA+AGG + chr1.3:19422410-19422429 MS.gene061710:CDS 40.0%
GCTGACAAGGACATACTTTA+AGG - chr1.3:19423160-19423179 None:intergenic 40.0%
GGAAAGAAACTGTTGCATGT+TGG + chr1.3:19422361-19422380 MS.gene061710:CDS 40.0%
GGATTATCATCGACGTCATA+AGG + chr1.3:19418694-19418713 MS.gene061710:CDS 40.0%
GTAGTAATCCTGTGGATGAA+AGG + chr1.3:19420378-19420397 MS.gene061710:CDS 40.0%
GTATCTGAATTCAAACTGGG+AGG - chr1.3:19420659-19420678 None:intergenic 40.0%
GTATTTCCACCGAATCTTGA+GGG + chr1.3:19422569-19422588 MS.gene061710:CDS 40.0%
GTTGATATCAGTGTCTCCTT+TGG + chr1.3:19421616-19421635 MS.gene061710:CDS 40.0%
TAAATCCTCTTGTGCCTAAC+AGG + chr1.3:19422953-19422972 MS.gene061710:intron 40.0%
TAACACAACGTCCAGAAAAG+GGG - chr1.3:19421724-19421743 None:intergenic 40.0%
TAACCAAGTCAAACGAGTTG+GGG + chr1.3:19423542-19423561 MS.gene061710:CDS 40.0%
TACTAACACGTCTTTGCATC+TGG - chr1.3:19420980-19420999 None:intergenic 40.0%
TAGAGGAAATGTCCCTCATT+CGG + chr1.3:19422716-19422735 MS.gene061710:intron 40.0%
TATCAACCAGCATATCCAGA+AGG - chr1.3:19422394-19422413 None:intergenic 40.0%
TATTCCTACAGGATCGTACT+GGG + chr1.3:19420809-19420828 MS.gene061710:intron 40.0%
TCAACAATCCAATTACAGGG+GGG - chr1.3:19421449-19421468 None:intergenic 40.0%
TCGTCAAATTCAGACTCAAG+CGG - chr1.3:19422152-19422171 None:intergenic 40.0%
TGTATTTCCACCGAATCTTG+AGG + chr1.3:19422568-19422587 MS.gene061710:CDS 40.0%
TTAGCAGCAACCTGATTCAA+CGG - chr1.3:19418914-19418933 None:intergenic 40.0%
TTCAAAGCAAGCATGAACCA+GGG - chr1.3:19420702-19420721 None:intergenic 40.0%
TTGATCATCGCGATGATGAT+AGG - chr1.3:19420084-19420103 None:intergenic 40.0%
TTGTCTATCGGAACGTTTAC+GGG - chr1.3:19423445-19423464 None:intergenic 40.0%
! AAATTGCCGCTGCAACTTTT+TGG + chr1.3:19420290-19420309 MS.gene061710:CDS 40.0%
! ATGTTCATGCTCCTCTGAAA+TGG - chr1.3:19422195-19422214 None:intergenic 40.0%
! ATTTGTACTGACGTTTGCTG+TGG + chr1.3:19422340-19422359 MS.gene061710:CDS 40.0%
! CAAAGTGCACCATTTAAAGC+TGG + chr1.3:19420605-19420624 MS.gene061710:CDS 40.0%
! CCTGTTGTGGAGATGAATTT+TGG + chr1.3:19420419-19420438 MS.gene061710:CDS 40.0%
! CTAATTTTCCCCCCTGTAAT+TGG + chr1.3:19421438-19421457 MS.gene061710:intron 40.0%
! GAAAAGAAAGTGCACAAGCA+TGG + chr1.3:19422490-19422509 MS.gene061710:CDS 40.0%
! GAATCAGGTTGCTGCTAATT+TGG + chr1.3:19418916-19418935 MS.gene061710:CDS 40.0%
! GACCCTTTAAAGAGATCAAG+AGG - chr1.3:19420548-19420567 None:intergenic 40.0%
! TGTGTTTGTGTGTTATTCCG+TGG + chr1.3:19423684-19423703 MS.gene061710:intron 40.0%
! TTCAATGTCTTCTGCTGCTT+GGG + chr1.3:19421105-19421124 MS.gene061710:CDS 40.0%
! TTGTTGACTGCTATTGCTGA+TGG + chr1.3:19418950-19418969 MS.gene061710:CDS 40.0%
!! CTGGTTGATAAACACTTCGA+AGG + chr1.3:19422404-19422423 MS.gene061710:CDS 40.0%
!! GAGATGAATTTTGGTCTGCA+AGG + chr1.3:19420428-19420447 MS.gene061710:CDS 40.0%
!! GATGCATTGGCTATTATCAC+TGG - chr1.3:19422110-19422129 None:intergenic 40.0%
!! GGCTAGTTTCCTTATTTGCA+TGG - chr1.3:19420502-19420521 None:intergenic 40.0%
!! GGCTTAGCCATTTTGTCTTT+TGG + chr1.3:19420765-19420784 MS.gene061710:intron 40.0%
!! GGTTTTGTCAACAGTGTAGT+AGG + chr1.3:19418771-19418790 MS.gene061710:CDS 40.0%
!!! GGTATTTTGACTGGATTTGG+AGG + chr1.3:19420476-19420495 MS.gene061710:CDS 40.0%
!!! GTACTGATTTTCCCCTTTTC+TGG + chr1.3:19421710-19421729 MS.gene061710:intron 40.0%
AAACAGCGACCTAGAACACT+AGG - chr1.3:19421909-19421928 None:intergenic 45.0%
AAAGCCTCATCCCTTGACTT+GGG - chr1.3:19422230-19422249 None:intergenic 45.0%
AAATCCTTAGTTAACGGGGC+AGG - chr1.3:19420122-19420141 None:intergenic 45.0%
AACCTGTCGAGCGAATAATC+TGG - chr1.3:19422317-19422336 None:intergenic 45.0%
AAGGAGAAGGGTTGTCAACA+GGG + chr1.3:19422423-19422442 MS.gene061710:CDS 45.0%
AAGGTTCTCGAATGTGAACG+AGG + chr1.3:19422289-19422308 MS.gene061710:CDS 45.0%
AATCCTTAGTTAACGGGGCA+GGG - chr1.3:19420121-19420140 None:intergenic 45.0%
ACAACAGGAGGAGATGAAGA+CGG - chr1.3:19420407-19420426 None:intergenic 45.0%
AGCCAATGCATCCATTTGCA+AGG + chr1.3:19422118-19422137 MS.gene061710:CDS 45.0%
AGGAGGGTGAAGTTTGCATT+TGG - chr1.3:19420064-19420083 None:intergenic 45.0%
ATACGCATGTGCAAACCATG+GGG + chr1.3:19421575-19421594 MS.gene061710:CDS 45.0%
ATCATCGCGATGATGATAGG+AGG - chr1.3:19420081-19420100 None:intergenic 45.0%
ATTAGCTCAATTCCCGGTGA+TGG - chr1.3:19423510-19423529 None:intergenic 45.0%
ATTGATAGGACAACACAGCC+GGG - chr1.3:19421079-19421098 None:intergenic 45.0%
CAAAACCCTTCTGGATATGC+TGG + chr1.3:19422385-19422404 MS.gene061710:CDS 45.0%
CAGTAAGATCAGCGGGTAAA+GGG - chr1.3:19419992-19420011 None:intergenic 45.0%
CATGTTGGTCAAAACCCTTC+TGG + chr1.3:19422376-19422395 MS.gene061710:CDS 45.0%
CCATCAACACCTGCTCAAAA+TGG + chr1.3:19420164-19420183 MS.gene061710:CDS 45.0%
CCTTCATCAAACTCCACCAA+CGG - chr1.3:19418803-19418822 None:intergenic 45.0%
CGGTATTACTCCCTTGCATT+TGG + chr1.3:19422598-19422617 MS.gene061710:CDS 45.0%
CTCCTTGCAAATGGATGCAT+TGG - chr1.3:19422123-19422142 None:intergenic 45.0%
CTTCAATGTCTTCTGCTGCT+TGG + chr1.3:19421104-19421123 MS.gene061710:CDS 45.0%
GATACGCATGTGCAAACCAT+GGG + chr1.3:19421574-19421593 MS.gene061710:CDS 45.0%
GCATTTGGCAGCATCTACAA+CGG + chr1.3:19422613-19422632 MS.gene061710:CDS 45.0%
GCGAAGATGGCAATTTCGAT+GGG - chr1.3:19420337-19420356 None:intergenic 45.0%
GCTATTGCTGATGGTTCTCA+AGG + chr1.3:19418959-19418978 MS.gene061710:CDS 45.0%
GCTTGAGTCTGAATTTGACG+AGG + chr1.3:19422151-19422170 MS.gene061710:CDS 45.0%
GGAGAAACTGAGCCTACATA+AGG - chr1.3:19423714-19423733 None:intergenic 45.0%
GGAGACACTGATATCAACTC+TGG - chr1.3:19421614-19421633 None:intergenic 45.0%
GGGGAAATATTTACCTCCTG+TGG - chr1.3:19422674-19422693 None:intergenic 45.0%
GGTCTGCAAGGTAGTATTAG+AGG + chr1.3:19420440-19420459 MS.gene061710:CDS 45.0%
GTAGATGCTGCCAAATGCAA+GGG - chr1.3:19422611-19422630 None:intergenic 45.0%
GTATTCCTACAGGATCGTAC+TGG + chr1.3:19420808-19420827 MS.gene061710:intron 45.0%
GTCATGCATGTCAGTCAACA+GGG + chr1.3:19422815-19422834 MS.gene061710:intron 45.0%
GTGTAGTAGGTTTCATCCGT+TGG + chr1.3:19418784-19418803 MS.gene061710:CDS 45.0%
GTGTCTCCTTTGGCAATTGT+CGG + chr1.3:19421626-19421645 MS.gene061710:CDS 45.0%
GTTATAGGATCAGGAGATCC+TGG + chr1.3:19421831-19421850 MS.gene061710:CDS 45.0%
TAGTAGGTTTCATCCGTTGG+TGG + chr1.3:19418787-19418806 MS.gene061710:CDS 45.0%
TCAACACCTGCTCAAAATGG+CGG + chr1.3:19420167-19420186 MS.gene061710:CDS 45.0%
TCATCGCGATGATGATAGGA+GGG - chr1.3:19420080-19420099 None:intergenic 45.0%
TCATGCATGTCAGTCAACAG+GGG + chr1.3:19422816-19422835 MS.gene061710:intron 45.0%
TGATGATTCAGATTGCCAGG+AGG + chr1.3:19420256-19420275 MS.gene061710:CDS 45.0%
TGCAATTGCACACTTGGAAC+AGG - chr1.3:19423571-19423590 None:intergenic 45.0%
TGCTGATGGTTCTCAAGGTT+TGG + chr1.3:19418964-19418983 MS.gene061710:intron 45.0%
TGTAGATGCTGCCAAATGCA+AGG - chr1.3:19422612-19422631 None:intergenic 45.0%
TTAGCTCAATTCCCGGTGAT+GGG - chr1.3:19423509-19423528 None:intergenic 45.0%
TTCCAGATTATTCGCTCGAC+AGG + chr1.3:19422312-19422331 MS.gene061710:CDS 45.0%
TTCTACACGACCATCAGACT+TGG + chr1.3:19421039-19421058 MS.gene061710:CDS 45.0%
TTGGAGAGTTACATAAGGCC+CGG + chr1.3:19421058-19421077 MS.gene061710:CDS 45.0%
! AGCATCTACAACGGATTCTG+AGG + chr1.3:19422622-19422641 MS.gene061710:CDS 45.0%
! AGCTTGGTTGGCTGTTTCAA+AGG + chr1.3:19422264-19422283 MS.gene061710:CDS 45.0%
! CGCGCCAAAAGAAGATTTTC+CGG + chr1.3:19423597-19423616 MS.gene061710:CDS 45.0%
! GATGTGTGATGCCATTTCAG+AGG + chr1.3:19422181-19422200 MS.gene061710:CDS 45.0%
! GCATCTACAACGGATTCTGA+GGG + chr1.3:19422623-19422642 MS.gene061710:CDS 45.0%
! GCTTGGTTGGCTGTTTCAAA+GGG + chr1.3:19422265-19422284 MS.gene061710:CDS 45.0%
! GTTGGCTGTTTCAAAGGGAA+AGG + chr1.3:19422270-19422289 MS.gene061710:CDS 45.0%
! TCTAGGTCGCTGTTTCATTG+AGG + chr1.3:19421914-19421933 MS.gene061710:CDS 45.0%
!! GGAGACTTGCTGGTCATAAT+CGG + chr1.3:19418840-19418859 MS.gene061710:CDS 45.0%
!! GTAGATTGGGTTGAAGTGCT+GGG + chr1.3:19423338-19423357 MS.gene061710:intron 45.0%
!! TGTAGATTGGGTTGAAGTGC+TGG + chr1.3:19423337-19423356 MS.gene061710:intron 45.0%
!!! CCATTTTGAGCAGGTGTTGA+TGG - chr1.3:19420167-19420186 None:intergenic 45.0%
!! AAAAAAAAAAGTAAAAATTA+TGG + chr1.3:19419177-19419196 MS.gene061710:intron 5.0%
!!! TTTTAGTTTTTTATAATAAT+TGG + chr1.3:19419340-19419359 MS.gene061710:intron 5.0%
!!! TTTTTTTTTTTTTTTTTTTG+TGG + chr1.3:19419278-19419297 MS.gene061710:intron 5.0%
AAGCATCCTAGCCATTTCCC+AGG + chr1.3:19420856-19420875 MS.gene061710:CDS 50.0%
AGCCTACATAAGGGGTTCCA+CGG - chr1.3:19423704-19423723 None:intergenic 50.0%
AGGATCAGGAGATCCTGGTA+TGG + chr1.3:19421836-19421855 MS.gene061710:CDS 50.0%
AGTCCCCAACTCGTTTGACT+TGG - chr1.3:19423548-19423567 None:intergenic 50.0%
AGTTGTAGACGGAGACTTGC+TGG + chr1.3:19418830-19418849 MS.gene061710:CDS 50.0%
ATCCTTAGTTAACGGGGCAG+GGG - chr1.3:19420120-19420139 None:intergenic 50.0%
ATGCATGTCAGTCAACAGGG+GGG + chr1.3:19422818-19422837 MS.gene061710:intron 50.0%
CAAAGCCTCATCCCTTGACT+TGG - chr1.3:19422231-19422250 None:intergenic 50.0%
CACGTCTTTGCATCTGGTGA+AGG - chr1.3:19420974-19420993 None:intergenic 50.0%
CATGCATGTCAGTCAACAGG+GGG + chr1.3:19422817-19422836 MS.gene061710:intron 50.0%
CGCGAAGATGGCAATTTCGA+TGG - chr1.3:19420338-19420357 None:intergenic 50.0%
CGGTCTCAACTCCTTGCAAA+TGG - chr1.3:19422132-19422151 None:intergenic 50.0%
CTCAGTTTCTCCCTTCAGGT+GGG + chr1.3:19423722-19423741 MS.gene061710:CDS 50.0%
CTCATCATGGCATAGGCATG+TGG - chr1.3:19423393-19423412 None:intergenic 50.0%
GAAGGAGAAGGGTTGTCAAC+AGG + chr1.3:19422422-19422441 MS.gene061710:CDS 50.0%
GAGGAGCCAAAAAGTTGCAG+CGG - chr1.3:19420299-19420318 None:intergenic 50.0%
GCAGTAAGATCAGCGGGTAA+AGG - chr1.3:19419993-19420012 None:intergenic 50.0%
GGATACGCATGTGCAAACCA+TGG + chr1.3:19421573-19421592 MS.gene061710:CDS 50.0%
GGTCATGCATGTCAGTCAAC+AGG + chr1.3:19422814-19422833 MS.gene061710:intron 50.0%
GTCTTCATCTCCTCCTGTTG+TGG + chr1.3:19420406-19420425 MS.gene061710:CDS 50.0%
TAGGCTCAGTTTCTCCCTTC+AGG + chr1.3:19423718-19423737 MS.gene061710:intron 50.0%
TCTCCTTTGGCAATTGTCGG+TGG + chr1.3:19421629-19421648 MS.gene061710:CDS 50.0%
TGTCCACCGACAATTGCCAA+AGG - chr1.3:19421635-19421654 None:intergenic 50.0%
TTCCGTGGAACCCCTTATGT+AGG + chr1.3:19423699-19423718 MS.gene061710:intron 50.0%
TTCTCCCAGTACGATCCTGT+AGG - chr1.3:19420816-19420835 None:intergenic 50.0%
TTGCACATGCGTATCCTTCC+TGG - chr1.3:19421569-19421588 None:intergenic 50.0%
TTGCTGGTCATAATCGGCGT+CGG + chr1.3:19418846-19418865 MS.gene061710:CDS 50.0%
TTTGGCAATTGTCGGTGGAC+AGG + chr1.3:19421634-19421653 MS.gene061710:CDS 50.0%
! CCGTTGGTGGAGTTTGATGA+AGG + chr1.3:19418800-19418819 MS.gene061710:CDS 50.0%
! CTGCCCGTTTTCATCCACAA+GGG - chr1.3:19423367-19423386 None:intergenic 50.0%
! GGTTGGGATTTTGCAAACCC+TGG + chr1.3:19420682-19420701 MS.gene061710:intron 50.0%
! TCTGCCCGTTTTCATCCACA+AGG - chr1.3:19423368-19423387 None:intergenic 50.0%
! TGAGATAGAGCACCCATCAC+CGG + chr1.3:19423494-19423513 MS.gene061710:CDS 50.0%
!! AGCAGGTGTTGATGGAGTTG+TGG - chr1.3:19420159-19420178 None:intergenic 50.0%
!! ATTTTGGGAGGCCCAAGTCA+AGG + chr1.3:19422216-19422235 MS.gene061710:CDS 50.0%
!! TTTTGGGAGGCCCAAGTCAA+GGG + chr1.3:19422217-19422236 MS.gene061710:CDS 50.0%
!!! TTCGATGGGCTGTCGTTTTC+TGG - chr1.3:19420323-19420342 None:intergenic 50.0%
ACTTTGTGCCAGGAGCAGAG+AGG - chr1.3:19421688-19421707 None:intergenic 55.0%
AGCGTTCCTGGGAAATGGCT+AGG - chr1.3:19420865-19420884 None:intergenic 55.0%
AGGGTTGTCAACAGGGTCAG+TGG + chr1.3:19422430-19422449 MS.gene061710:CDS 55.0%
CCAAGCCTGTTAGGCACAAG+AGG - chr1.3:19422961-19422980 None:intergenic 55.0%
CCTCTTGTGCCTAACAGGCT+TGG + chr1.3:19422958-19422977 MS.gene061710:intron 55.0%
CCTGCTCAAAATGGCGGCAA+CGG + chr1.3:19420173-19420192 MS.gene061710:CDS 55.0%
CTGCTCAAAATGGCGGCAAC+GGG + chr1.3:19420174-19420193 MS.gene061710:CDS 55.0%
GAAAACGCAGCCGGATGAAG+TGG + chr1.3:19418871-19418890 MS.gene061710:CDS 55.0%
GCAAGGGAGTAATACCGCCA+GGG - chr1.3:19422595-19422614 None:intergenic 55.0%
GCAGCAACCTGATTCAACGG+CGG - chr1.3:19418911-19418930 None:intergenic 55.0%
GCTCAGTTTCTCCCTTCAGG+TGG + chr1.3:19423721-19423740 MS.gene061710:CDS 55.0%
GGAAGAAACCTCTCTGCTCC+TGG + chr1.3:19421677-19421696 MS.gene061710:CDS 55.0%
TCCTTAGTTAACGGGGCAGG+GGG - chr1.3:19420119-19420138 None:intergenic 55.0%
TGCAAGGGAGTAATACCGCC+AGG - chr1.3:19422596-19422615 None:intergenic 55.0%
TGTGCAAACCATGGGGAACG+TGG + chr1.3:19421582-19421601 MS.gene061710:CDS 55.0%
TTCGCAGCGTTCCTGGGAAA+TGG - chr1.3:19420870-19420889 None:intergenic 55.0%
! GAGATAGAGCACCCATCACC+GGG + chr1.3:19423495-19423514 MS.gene061710:CDS 55.0%
! GATTTTCCGGTTCACGGAGC+TGG + chr1.3:19423610-19423629 MS.gene061710:CDS 55.0%
!! GAAGTGCTGGGAAACCCTTG+TGG + chr1.3:19423350-19423369 MS.gene061710:CDS 55.0%
!!! TGGGCTGTCGTTTTCTGGAG+AGG - chr1.3:19420318-19420337 None:intergenic 55.0%
AACGCAGCCGGATGAAGTGG+CGG + chr1.3:19418874-19418893 MS.gene061710:CDS 60.0%
ACCTGTGTTCGCAGCGTTCC+TGG - chr1.3:19420877-19420896 None:intergenic 60.0%
AGGTTCGCCGCCGTTGAATC+AGG + chr1.3:19418901-19418920 MS.gene061710:CDS 60.0%
CCTCCAACCGCCACTTCATC+CGG - chr1.3:19418884-19418903 None:intergenic 60.0%
CCTGTGTTCGCAGCGTTCCT+GGG - chr1.3:19420876-19420895 None:intergenic 60.0%
CCTTAGTTAACGGGGCAGGG+GGG - chr1.3:19420118-19420137 None:intergenic 60.0%
CTTAGTTAACGGGGCAGGGG+GGG - chr1.3:19420117-19420136 None:intergenic 60.0%
GACGGCGACCTTTCATCCAC+AGG - chr1.3:19420389-19420408 None:intergenic 60.0%
GAGGCCCAAGTCAAGGGATG+AGG + chr1.3:19422223-19422242 MS.gene061710:CDS 60.0%
GCAAACCATGGGGAACGTGG+AGG + chr1.3:19421585-19421604 MS.gene061710:CDS 60.0%
GTGAAGCCAGCTCCGTGAAC+CGG - chr1.3:19423619-19423638 None:intergenic 60.0%
! CTGGTCATAATCGGCGTCGG+AGG + chr1.3:19418849-19418868 MS.gene061710:CDS 60.0%
! GGTTCACGGAGCTGGCTTCA+CGG + chr1.3:19423618-19423637 MS.gene061710:CDS 60.0%
!! CCGTTGCCGCCATTTTGAGC+AGG - chr1.3:19420176-19420195 None:intergenic 60.0%
CAGCCGGATGAAGTGGCGGT+TGG + chr1.3:19418878-19418897 MS.gene061710:CDS 65.0%
CCACCGAATCTTGAGGGCCC+TGG + chr1.3:19422575-19422594 MS.gene061710:CDS 65.0%
CCAGGGCCCTCAAGATTCGG+TGG - chr1.3:19422578-19422597 None:intergenic 65.0%
CCCAGGAACGCTGCGAACAC+AGG + chr1.3:19420873-19420892 MS.gene061710:CDS 65.0%
CCCCCCTGCCCCGTTAACTA+AGG + chr1.3:19420115-19420134 MS.gene061710:CDS 65.0%
CCGAATCTTGAGGGCCCTGG+CGG + chr1.3:19422578-19422597 MS.gene061710:CDS 65.0%
CCGCCAGGGCCCTCAAGATT+CGG - chr1.3:19422581-19422600 None:intergenic 65.0%
CCGGATGAAGTGGCGGTTGG+AGG + chr1.3:19418881-19418900 MS.gene061710:CDS 65.0%
GCGTCGGAGGAAAACGCAGC+CGG + chr1.3:19418862-19418881 MS.gene061710:CDS 65.0%
GGAGACCTCCACGTTCCCCA+TGG - chr1.3:19421593-19421612 None:intergenic 65.0%
!! GGGGCAGGGGGGGTGTTGTT+TGG - chr1.3:19420107-19420126 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 19418650 19423753 19418650 ID=MS.gene061710
chr1.3 mRNA 19418650 19423753 19418650 ID=MS.gene061710.t1;Parent=MS.gene061710
chr1.3 exon 19418650 19418980 19418650 ID=MS.gene061710.t1.exon1;Parent=MS.gene061710.t1
chr1.3 CDS 19418650 19418980 19418650 ID=cds.MS.gene061710.t1;Parent=MS.gene061710.t1
chr1.3 exon 19419922 19420682 19419922 ID=MS.gene061710.t1.exon2;Parent=MS.gene061710.t1
chr1.3 CDS 19419922 19420682 19419922 ID=cds.MS.gene061710.t1;Parent=MS.gene061710.t1
chr1.3 exon 19420820 19420894 19420820 ID=MS.gene061710.t1.exon3;Parent=MS.gene061710.t1
chr1.3 CDS 19420820 19420894 19420820 ID=cds.MS.gene061710.t1;Parent=MS.gene061710.t1
chr1.3 exon 19421025 19421132 19421025 ID=MS.gene061710.t1.exon4;Parent=MS.gene061710.t1
chr1.3 CDS 19421025 19421132 19421025 ID=cds.MS.gene061710.t1;Parent=MS.gene061710.t1
chr1.3 exon 19421220 19421337 19421220 ID=MS.gene061710.t1.exon5;Parent=MS.gene061710.t1
chr1.3 CDS 19421220 19421337 19421220 ID=cds.MS.gene061710.t1;Parent=MS.gene061710.t1
chr1.3 exon 19421570 19421705 19421570 ID=MS.gene061710.t1.exon6;Parent=MS.gene061710.t1
chr1.3 CDS 19421570 19421705 19421570 ID=cds.MS.gene061710.t1;Parent=MS.gene061710.t1
chr1.3 exon 19421791 19421935 19421791 ID=MS.gene061710.t1.exon7;Parent=MS.gene061710.t1
chr1.3 CDS 19421791 19421935 19421791 ID=cds.MS.gene061710.t1;Parent=MS.gene061710.t1
chr1.3 exon 19422077 19422679 19422077 ID=MS.gene061710.t1.exon8;Parent=MS.gene061710.t1
chr1.3 CDS 19422077 19422679 19422077 ID=cds.MS.gene061710.t1;Parent=MS.gene061710.t1
chr1.3 exon 19423342 19423680 19423342 ID=MS.gene061710.t1.exon9;Parent=MS.gene061710.t1
chr1.3 CDS 19423342 19423680 19423342 ID=cds.MS.gene061710.t1;Parent=MS.gene061710.t1
chr1.3 exon 19423721 19423753 19423721 ID=MS.gene061710.t1.exon10;Parent=MS.gene061710.t1
chr1.3 CDS 19423721 19423753 19423721 ID=cds.MS.gene061710.t1;Parent=MS.gene061710.t1
Gene Sequence

>MS.gene061710

ATGTGTCAAGTTGATAACTGCAAAGAAGATCTATCAAAAGCGAAGGATTATCATCGACGTCATAAGGTGTGTGAAGCTCATAGTAAAGCTTCTAAGGCTTTGTTAGGGAATCAAATGCAACGGTTTTGTCAACAGTGTAGTAGGTTTCATCCGTTGGTGGAGTTTGATGAAGGAAAACGGAGTTGTAGACGGAGACTTGCTGGTCATAATCGGCGTCGGAGGAAAACGCAGCCGGATGAAGTGGCGGTTGGAGGTTCGCCGCCGTTGAATCAGGTTGCTGCTAATTTGGAGATTTTTAACTTGTTGACTGCTATTGCTGATGGTTCTCAAGGTTTGGTTTCTTTGTTTTTTTTTTTTTTTGAAAGGTCAAGGTTTGGTTTCTATTTTTGGTTCAAAAATTAGTTTTTGATTTAATTTTGTTTGAATAGTAGTTTATATTACTATTTTGGTAGTTATTATGTAAATTTTAGAAATTTGAAACAAATATTTTGTTGGTATTTATTTGAAATAAATAAAAGTAATTTAAAAAAAAAAAAAGTAAAAATTATGGTGAAATTGCTATATTTATCTGAAGAAGCTAATTAAGTAGTTCTTTTATAGCTAAATTTTGGATCAATAATGTTTTTTTTTTTTTTTTTTTTTTTTTTGTGGTGTTAGGATCAATAATTTGTTTCTATAGATCAAATACGTTTTTAGTTTTTTATAATAATTGGAACATGCCCTTAATTTTTTTTTTGAAGGAGGAACATGCCCTTAATTGTTATTTACTTTGAATTTTTTTGATCATGAATTGCAATAATTTTGATTTCAATAATTTAGAGATTAATTTGTTGAGTTTTTTAAAGAAAGTTGAAGTTGTGTTGTATTTGTTTATTTGAATGAAAATAATTCTATCTTAAAAATCAGTTATGAATGTGAAAAATGTTTTTTTTTTTTGTTGAGAAGCTACAGAAAGCAGCTTCTAATTTGAAACAGTTTTTAGACTTTTTTTTTTCTTTCCTTTATCAGATTCTCAATTTTGAAAATTTGCAAGAAACGAATGAAACTTCTAAAAGTGATAATTTTGTTAAAAAAACTCGATTTTTTCAAAATAAAATTTGTAACAAACAGACTCTAATTTATTTTTTAGAAGTAATTATTTTTCTTAATTTTCGAAAATCGTTTCTAGGAAAAATAAACATAAACTAACAAGCAAGTAAGCAAGTGCTACTTGAGATTGTTTTTTCTTTTCTTGTGTGGGCTAATATTGTTTGGTTTGATTATATTGTATAGGAAAATTTGAGGAAAGAAGGTCACAAGTTCCAGATAAAGAACAGCTTGTACAAATTCTGAATAGGATCCCTTTACCCGCTGATCTTACTGCAAAATTGCTGGATGTTGGTAATAATTTGAATGCGAAAAATGATAATGTCCAAATGCAAACTTCACCCTCCTATCATCATCGCGATGATCAACCAAACAACACCCCCCCTGCCCCGTTAACTAAGGATTTTCTTGCTGTTCTTTCCACAACTCCATCAACACCTGCTCAAAATGGCGGCAACGGGTCCACAAGTAGTGCAGATCATATGAGAGAAAGAAGCAGTGGCAGTTCTCAGTCTCCAAATGATGATTCAGATTGCCAGGAGGATGTTCGAGTTAAATTGCCGCTGCAACTTTTTGGCTCCTCTCCAGAAAACGACAGCCCATCGAAATTGCCATCTTCGCGAAAGTATTTTTCATCGGAAAGTAGTAATCCTGTGGATGAAAGGTCGCCGTCTTCATCTCCTCCTGTTGTGGAGATGAATTTTGGTCTGCAAGGTAGTATTAGAGGTCTCAATTCTAATGGTATTTTGACTGGATTTGGAGGCCATGCAAATAAGGAAACTAGCCAAAGTCATAGTTGTACTACTATCCCTCTTGATCTCTTTAAAGGGTCAAAATCAAATAACATGATTCAACAATCTAGTTCAGTTCAAAGTGCACCATTTAAAGCTGGTTATGCATCTTCGGGTTCTGATTATTCACCTCCCAGTTTGAATTCAGATACTCAGGTTGGGATTTTGCAAACCCTGGTTCATGCTTGCTTTGAATTTGTACTTTGCTTTATATATGTTCTTATTCTTTTAATTAAGAGGCTTAGCCATTTTGTCTTTTGGGTTTTAATCTATTTGTGATGGTATTCCTACAGGATCGTACTGGGAGAATAATGTTTAAATTGTTTGACAAGCATCCTAGCCATTTCCCAGGAACGCTGCGAACACAGGTGAAATTATTGTTGCACTTTCCCATTAATATTTTGCGAATCGGATGATGTCATTTTAATGAATATGGCAAAATGTCCTTCACCAGATGCAAAGACGTGTTAGTATTCATAATCATTTTGTCCTTTTCAGATTTACAATTGGCTTTCTACACGACCATCAGACTTGGAGAGTTACATAAGGCCCGGCTGTGTTGTCCTATCAATTTATGCTTCAATGTCTTCTGCTGCTTGGGTGCAAGTAAGCGAACTTCTATGAATAGTGATGCACGTTTTGAGCTTGTAGAATTCTCCTTGCTGATTACTTGCATATTGTATTTTTTTGCAGTTAGAAGAAAACTTCGTCCAACGTGTTGATTCTTTAATTCATAACTCAGATTCTGATTTCTGGAGAAATGGAAGATTTCTTGTTTATTCTGGCAGTCAGTTAGCATCACACAAAGATGGTGAGCACTGTGACTAGTTTTGATTTCTGACTGGTTTCGATCACTTTTTTTTTATCTTAGGCCTCATATTTTTATATTCGTGTAACTTTTGGAGGTTGTACTAATTTTCCCCCCTGTAATTGGATTGTTGATTACTGATTTTAAAACAAACTTTAGACGGTTAAATATGCCATCATAGCTAGATTTTTATTATCAAGGAGTTGAATCTGATAGATTTAAACTGAAATTCCAGGAAGGATACGCATGTGCAAACCATGGGGAACGTGGAGGTCTCCAGAGTTGATATCAGTGTCTCCTTTGGCAATTGTCGGTGGACAGGAGACTTCTATTTCATTGAAGGGAAGAAACCTCTCTGCTCCTGGCACAAAGTTAGTACTGATTTTCCCCTTTTCTGGACGTTGTGTTATGCTTCTTTCTGGTCTGTTCGCTTACTGTTTGTCCTAAATTTTGCAGGATTCATTGCACTGATGCTGACTGTTATACATCATCAGAAGTTATAGGATCAGGAGATCCTGGTATGGTCTATGATGAGATAAAATTGAGTGGTTTTGAAGTTCAGAATACATCTCCTAGTGTTCTAGGTCGCTGTTTCATTGAGGTATATCTCTACATTCTATTGACTGCACATGATTACTGTGATGGTTGCACTTGCATGTCTTGAAAATTTTCATGTACATGAAGTATATATTTGTGAACTTCTATTAAAAATAATAATTGCAACTTACATGTTTGTGAACAGGTTGAAAATGGTTTCAAGGGAAACAGTTTTCCAGTGATAATAGCCAATGCATCCATTTGCAAGGAGTTGAGACCGCTTGAGTCTGAATTTGACGAGGATGAAAAGATGTGTGATGCCATTTCAGAGGAGCATGAACATAATTTTGGGAGGCCCAAGTCAAGGGATGAGGCTTTGCACTTTTTGAATGAGCTTGGTTGGCTGTTTCAAAGGGAAAGGTTCTCGAATGTGAACGAGGTTCCAGATTATTCGCTCGACAGGTTCAAATTTGTACTGACGTTTGCTGTGGAAAGAAACTGTTGCATGTTGGTCAAAACCCTTCTGGATATGCTGGTTGATAAACACTTCGAAGGAGAAGGGTTGTCAACAGGGTCAGTGGAGATGCTGAAAGCAATCCAACTTCTAAATAGAGCAGTGAAAAGAAAGTGCACAAGCATGGTTGATTTGCTCATTAACTATTCTATAACTAGCAAAAATGACACATCCAAGAAATATGTATTTCCACCGAATCTTGAGGGCCCTGGCGGTATTACTCCCTTGCATTTGGCAGCATCTACAACGGATTCTGAGGGTGTAATTGACTCTTTAACAAATGATCCACAGGAGGTAAATATTTCCCCCCTACTTTGACAAAAAAGTTACTAGAGGAAATGTCCCTCATTCGGATTTACTGAATTGTTTTTGCTGAGTATCAAAAATAGTCTAATTGGATTGCCTATGGTTTTTATGGGGTTTAAATAGGTCATGCATGTCAGTCAACAGGGGGGACCTACTGCCTAGTATATGTTAGGCCAGACTGTGTCAGAGTTTTTTTTATAGACAAGTGGCTTTTTGAAAAGTCTATTTAGCTGAAAATGACAAGTTATTATACATATCTTATAAATCCTCTTGTGCCTAACAGGCTTGGCTATTTAAATAAATTTGAAGGATTTTTTTTATAATGTTGTCAAAAAGAAGAACAAAGGATTTTGATGTGTTAACAATCTAATACTTTATATCATTCTAAAGATTTAAGCATATCGACCTACATAAAAGAATTAAATCTATGAATTTTTTAGTGATAAATTTTGAAGACCTTATCAACCTTAAAGTATGTCCTTGTCAGCCTACTTAGAATATAAATCAGTAGTTATCATGTTGTTTGGACTTCAACTCATCCTTTTCTCTACAACTTAGGATTATATTTCAATTTACATTAATGATGTTTGCATGCTTCTATTTTATTGAGTCCTTGACTTCTTGTCTGTATTTTTTATGCTGGTGTGTAGATTGGGTTGAAGTGCTGGGAAACCCTTGTGGATGAAAACGGGCAGACTCCACATGCCTATGCCATGATGAGAAATAATCACTCTTATAATATGTTGGTTGCCCGTAAACGTTCCGATAGACAAAGAAGTGAAGTTTCAGTTAGAATTGATAATGAGATAGAGCACCCATCACCGGGAATTGAGCTAATGCAAAAGCGAATTAACCAAGTCAAACGAGTTGGGGACTCCTGTTCCAAGTGTGCAATTGCAGAAGTTCGCGCCAAAAGAAGATTTTCCGGTTCACGGAGCTGGCTTCACGGTCCCTTTATTCATTCGATGCTAGCTGTTGCTGCTGTTTGTGTATGTGTTTGTGTGTTATTCCGTGGAACCCCTTATGTAGGCTCAGTTTCTCCCTTCAGGTGGGAAAACTTGA
Protein sequence

>MS.gene061710.t1

MCQVDNCKEDLSKAKDYHRRHKVCEAHSKASKALLGNQMQRFCQQCSRFHPLVEFDEGKRSCRRRLAGHNRRRRKTQPDEVAVGGSPPLNQVAANLEIFNLLTAIADGSQGKFEERRSQVPDKEQLVQILNRIPLPADLTAKLLDVGNNLNAKNDNVQMQTSPSYHHRDDQPNNTPPAPLTKDFLAVLSTTPSTPAQNGGNGSTSSADHMRERSSGSSQSPNDDSDCQEDVRVKLPLQLFGSSPENDSPSKLPSSRKYFSSESSNPVDERSPSSSPPVVEMNFGLQGSIRGLNSNGILTGFGGHANKETSQSHSCTTIPLDLFKGSKSNNMIQQSSSVQSAPFKAGYASSGSDYSPPSLNSDTQDRTGRIMFKLFDKHPSHFPGTLRTQIYNWLSTRPSDLESYIRPGCVVLSIYASMSSAAWVQLEENFVQRVDSLIHNSDSDFWRNGRFLVYSGSQLASHKDGRIRMCKPWGTWRSPELISVSPLAIVGGQETSISLKGRNLSAPGTKIHCTDADCYTSSEVIGSGDPGMVYDEIKLSGFEVQNTSPSVLGRCFIEVENGFKGNSFPVIIANASICKELRPLESEFDEDEKMCDAISEEHEHNFGRPKSRDEALHFLNELGWLFQRERFSNVNEVPDYSLDRFKFVLTFAVERNCCMLVKTLLDMLVDKHFEGEGLSTGSVEMLKAIQLLNRAVKRKCTSMVDLLINYSITSKNDTSKKYVFPPNLEGPGGITPLHLAASTTDSEGVIDSLTNDPQEIGLKCWETLVDENGQTPHAYAMMRNNHSYNMLVARKRSDRQRSEVSVRIDNEIEHPSPGIELMQKRINQVKRVGDSCSKCAIAEVRAKRRFSGSRSWLHGPFIHSMLAVAAVCAQFLPSGGKT