AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene062059

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene062059.t1 AT3G17450 56.331 845 337 12 1 829 1 829 0.0 969
MS.gene062059.t1 AT3G17450 56.331 845 337 12 1 829 1 829 0.0 969
MS.gene062059.t1 AT4G15020 33.381 701 419 16 114 791 1 676 2.53e-105 344
MS.gene062059.t1 AT4G15020 33.381 701 419 16 114 791 1 676 2.53e-105 344
MS.gene062059.t1 AT3G22220 31.844 716 458 18 114 819 1 696 3.76e-103 338
MS.gene062059.t1 AT3G22220 31.844 716 458 18 114 819 1 696 3.76e-103 338
MS.gene062059.t1 AT3G22220 31.844 716 458 18 114 819 1 696 3.76e-103 338
MS.gene062059.t1 AT3G22220 31.844 716 458 18 114 819 1 696 3.76e-103 338
MS.gene062059.t1 AT1G79740 29.550 511 346 6 309 819 111 607 2.31e-77 265
MS.gene062059.t1 AT1G79740 29.550 511 346 6 309 819 111 607 2.31e-77 265
MS.gene062059.t1 AT1G79740 29.303 488 331 6 332 819 1 474 4.58e-74 253
MS.gene062059.t1 AT1G79740 29.303 488 331 6 332 819 1 474 4.58e-74 253
MS.gene062059.t1 AT3G13020 26.426 666 410 18 137 793 10 604 6.01e-69 241
MS.gene062059.t1 AT3G13030 27.824 478 329 8 319 790 62 529 5.85e-59 211
MS.gene062059.t1 AT3G13030 27.824 478 329 8 319 790 62 529 5.85e-59 211
MS.gene062059.t1 AT3G13030 27.824 478 329 8 319 790 62 529 5.85e-59 211
MS.gene062059.t1 AT3G13030 27.824 478 329 8 319 790 62 529 5.85e-59 211
MS.gene062059.t1 AT3G13010 28.398 493 324 12 310 793 99 571 2.43e-54 199
MS.gene062059.t1 AT3G13030 28.092 477 296 10 319 790 62 496 6.20e-51 187
MS.gene062059.t1 AT5G33406 28.530 347 235 4 511 856 1 335 1.40e-44 169
MS.gene062059.t1 AT1G43260 33.333 225 148 2 318 541 47 270 1.48e-37 143
MS.gene062059.t1 AT5G31412 37.879 132 80 1 353 484 110 239 9.70e-21 96.7
MS.gene062059.t1 AT1G36095 31.176 170 116 1 412 581 131 299 3.02e-20 92.8

Find 179 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCTTCTCAACGCTGGTTC+TGG 0.154626 2.3:+45056700 None:intergenic
CAGCATTTAGCCCGAGTTTC+TGG 0.174313 2.3:-45057357 MS.gene062059:CDS
CCCATCCAGCCAACTTATTT+CGG 0.211422 2.3:-45056455 MS.gene062059:CDS
TTCAGCAAGATAATTCTTAA+TGG 0.235713 2.3:+45056405 None:intergenic
ATTAGAGGACATTCCCTTAA+AGG 0.245359 2.3:+45056729 None:intergenic
ACAACATTTGGCTAGGATTC+CGG 0.260414 2.3:-45056992 MS.gene062059:CDS
CCATCCAGCCAACTTATTTC+GGG 0.265939 2.3:-45056454 MS.gene062059:CDS
AACATATTTATTTAAGCTTT+TGG 0.267928 2.3:-45056230 MS.gene062059:CDS
GAATTATCTTGCTGAATATA+AGG 0.282596 2.3:-45056398 MS.gene062059:CDS
CATTAACTTTCTTCTGTGAT+AGG 0.284701 2.3:+45054790 None:intergenic
AGATACAGGAAAGACCTTTA+AGG 0.304417 2.3:-45056743 MS.gene062059:CDS
CTCTTTCCCCTGGCTTGAAC+TGG 0.307893 2.3:+45055700 None:intergenic
CAACATTTGGCTAGGATTCC+GGG 0.313749 2.3:-45056991 MS.gene062059:CDS
AACTAATATACAATCAAATA+TGG 0.313840 2.3:-45055886 MS.gene062059:CDS
CACGGAAATATGAGCCATTC+TGG 0.321607 2.3:-45055496 MS.gene062059:CDS
AAAGGAGAAGGAATTTGTTC+TGG 0.322409 2.3:-45056006 MS.gene062059:CDS
ATCTTCTCAACGCTGGTTCT+GGG 0.327767 2.3:+45056701 None:intergenic
TTGCTGAATATAAGGCTTCC+TGG 0.330441 2.3:-45056390 MS.gene062059:CDS
TAATAGATTTAAACAACATT+TGG 0.335959 2.3:-45057004 MS.gene062059:CDS
GAATGTTTCTTTCAAACAAA+TGG 0.339612 2.3:-45055739 MS.gene062059:CDS
AGATGACTTTGGAACTGAAT+TGG 0.347315 2.3:-45055087 MS.gene062059:CDS
CTGGAATTGGCTGGTCAATA+TGG 0.351924 2.3:-45056493 MS.gene062059:CDS
TTCCCAGCAGCTTTATAGTT+AGG 0.352395 2.3:+45056040 None:intergenic
TGCTACATTGCAGAATTTGT+TGG 0.356863 2.3:-45055783 MS.gene062059:CDS
GATACAGGAAAGACCTTTAA+GGG 0.362013 2.3:-45056742 MS.gene062059:CDS
AATCACTGGTTGTTCGATAA+TGG 0.364280 2.3:-45056365 MS.gene062059:CDS
GAGAATGCCAAGTAAGAAAA+AGG 0.364495 2.3:-45054734 MS.gene062059:CDS
AAACAAAATCTTGACGATAT+CGG 0.369198 2.3:+45055396 None:intergenic
CTTGCAATCAAATCTATTCA+TGG 0.376674 2.3:-45055527 MS.gene062059:CDS
TTAACTCCTCTTCGGTCCTT+AGG 0.382982 2.3:-45057123 MS.gene062059:CDS
TCATCTTCATTATCAGACTT+TGG 0.384649 2.3:+45056844 None:intergenic
GACAAAGTAGTGGAAGAAAT+AGG 0.386856 2.3:-45056208 MS.gene062059:CDS
TTCCCATGAGCTGGTTACTA+TGG 0.389104 2.3:-45053618 MS.gene062059:CDS
AAGCTTTGATTGATAATGAT+AGG 0.396713 2.3:-45056777 MS.gene062059:CDS
GTTGATCCTGGTTGGGATCA+TGG 0.396999 2.3:-45057462 MS.gene062059:CDS
AGGATTTGTTGATCCTGGTT+GGG 0.401216 2.3:-45057469 MS.gene062059:CDS
CAGGATTTGTTGATCCTGGT+TGG 0.401261 2.3:-45057470 MS.gene062059:CDS
TGCATCTTCAACTACATTAG+TGG 0.404393 2.3:+45056252 None:intergenic
TTATCAGACTTTGGATAGAA+AGG 0.411222 2.3:+45056853 None:intergenic
TCCACAGGATTTGTTGATCC+TGG 0.414673 2.3:-45057474 MS.gene062059:CDS
TGGTTCTGGGCTAGTATTAG+AGG 0.417393 2.3:+45056714 None:intergenic
TCAAACTTGCAAACAACTAA+AGG 0.417490 2.3:-45056632 MS.gene062059:CDS
CATAAAATGCTGGAATTGGC+TGG 0.424079 2.3:-45056502 MS.gene062059:CDS
AATTCAGCTCAAGATGACTT+TGG 0.436462 2.3:-45055098 MS.gene062059:CDS
CCGAAATAAGTTGGCTGGAT+GGG 0.437278 2.3:+45056455 None:intergenic
ACTCCTAACTATAAAGCTGC+TGG 0.439048 2.3:-45056043 MS.gene062059:CDS
ATGTATATAACGACTTGTAC+AGG 0.442939 2.3:-45055556 MS.gene062059:CDS
TACAAGTCGTTATATACATA+TGG 0.444904 2.3:+45055560 None:intergenic
GAAGCACACTGGGTGCCAGC+TGG 0.445938 2.3:+45055812 None:intergenic
TGTAGAAGAGTGCATGGAAA+AGG 0.446118 2.3:-45055924 MS.gene062059:CDS
TCATCTAGATCAACACCAAA+AGG 0.447915 2.3:+45053701 None:intergenic
CTGGCTTGAACTGGAGAACC+TGG 0.450018 2.3:+45055709 None:intergenic
TTCCTTGCGTAATTTCTTAG+TGG 0.450982 2.3:+45056597 None:intergenic
AAGACGATGAAGAGCAAGTT+GGG 0.451975 2.3:-45057197 MS.gene062059:CDS
CTGTAAATTTAACTCCTCTT+CGG 0.460622 2.3:-45057131 MS.gene062059:CDS
ACAAATCCTGTGGAGCGTAT+TGG 0.462386 2.3:+45057483 None:intergenic
CAAACAAATGGATGTCATCC+AGG 0.463821 2.3:-45055727 MS.gene062059:CDS
CAGGTTCTCCAGTTCAAGCC+AGG 0.466832 2.3:-45055708 MS.gene062059:CDS
GCAGATCATGCTAACATTGA+TGG 0.469084 2.3:-45053569 MS.gene062059:CDS
TTACAAGGTGCTACCTCTCC+CGG 0.469285 2.3:+45056973 None:intergenic
GTTCGATAATGGCTGATAGT+TGG 0.469340 2.3:-45056354 MS.gene062059:CDS
AGGAGATACTGTAAAGATAC+AGG 0.472813 2.3:-45056757 MS.gene062059:CDS
TTTCTTGTTTCATCTCCTCA+TGG 0.477086 2.3:-45056301 MS.gene062059:CDS
GTGGGAACACGGTGTTGCTC+AGG 0.477649 2.3:-45057085 MS.gene062059:CDS
AAGCAAAGGAAAGCAATTGA+TGG 0.478129 2.3:-45057169 MS.gene062059:CDS
TTACCTCACTAGCTGCTTGG+TGG 0.478382 2.3:-45054944 MS.gene062059:intron
GTTTGAAGATTCTGATTTGT+GGG 0.479122 2.3:+45056649 None:intergenic
TACTGTGAGAAAGTTGTTAG+TGG 0.482355 2.3:-45057033 MS.gene062059:CDS
TCCTTGCGTAATTTCTTAGT+GGG 0.485270 2.3:+45056598 None:intergenic
TTTGGCTAGGATTCCGGGAG+AGG 0.486181 2.3:-45056986 MS.gene062059:CDS
ACATAGGCAACCCGAGGGTA+AGG 0.487674 2.3:-45056884 MS.gene062059:CDS
TGATAGTTGGAGAGATGCAC+AGG 0.488405 2.3:-45056341 MS.gene062059:CDS
TTGGCAATTAGCACAAGAAC+AGG 0.492641 2.3:-45055068 MS.gene062059:CDS
CATATTGCAAGTGTTTCAAA+AGG 0.493903 2.3:-45055609 MS.gene062059:CDS
AGATGACGAGTATGAGCAGC+AGG 0.496541 2.3:-45056827 MS.gene062059:CDS
TGGATCTGAAAGGCATCTAA+AGG 0.499713 2.3:-45053642 MS.gene062059:CDS
TGAAGTAACATACTGTGAAA+AGG 0.499819 2.3:-45057334 MS.gene062059:CDS
GCAACACCGTGTTCCCACCC+TGG 0.504664 2.3:+45057090 None:intergenic
CTGTCTATCACCTTCCAGAA+TGG 0.505410 2.3:+45055482 None:intergenic
GCGACCCGAAATAAGTTGGC+TGG 0.508113 2.3:+45056450 None:intergenic
TGCTGAATATAAGGCTTCCT+GGG 0.512753 2.3:-45056389 MS.gene062059:CDS
AAATAAAAGAGAATATGAAA+TGG 0.513526 2.3:-45056924 MS.gene062059:CDS
CTCCTAACTATAAAGCTGCT+GGG 0.516115 2.3:-45056042 MS.gene062059:CDS
AGGTGAAGAAAATGTAGTGC+AGG 0.518522 2.3:-45056188 MS.gene062059:intron
AAGTAAGCAGCCAAGTAAAG+AGG 0.521409 2.3:+45055434 None:intergenic
GGATCTGAAAGGCATCTAAA+GGG 0.523160 2.3:-45053641 MS.gene062059:CDS
GATTCAATAGACTATGATGA+TGG 0.524240 2.3:-45053662 MS.gene062059:CDS
CAGTTCAAGCCAGGGGAAAG+AGG 0.525879 2.3:-45055699 MS.gene062059:CDS
ATGAAAAGTGAATTTACCCA+TGG 0.526104 2.3:-45055851 MS.gene062059:CDS
GAAAGCAATTGATGGATGGC+AGG 0.527166 2.3:-45057161 MS.gene062059:CDS
CAGCCATAGTAACCAGCTCA+TGG 0.528043 2.3:+45053615 None:intergenic
TACTGTGGGAAAGTTGTTAG+TGG 0.528153 2.3:-45057399 MS.gene062059:CDS
GTCTGAATGAATGCATTGTT+CGG 0.528690 2.3:-45055263 MS.gene062059:CDS
CAACACCGTGTTCCCACCCT+GGG 0.529812 2.3:+45057091 None:intergenic
AACATACTGTGAAAAGGCTC+CGG 0.529848 2.3:-45057328 MS.gene062059:CDS
AGTTTGAAGATTCTGATTTG+TGG 0.530141 2.3:+45056648 None:intergenic
AAGGCTTCCTGGGCAATCAC+TGG 0.530608 2.3:-45056379 MS.gene062059:CDS
CATCTAGATCAACACCAAAA+GGG 0.531085 2.3:+45053702 None:intergenic
CATTCTGGAAGGTGATAGAC+AGG 0.532154 2.3:-45055481 MS.gene062059:CDS
ATGTTACTTCACCAGAAACT+CGG 0.532770 2.3:+45057346 None:intergenic
CAGATCCGACTCATCGTCAC+TGG 0.533981 2.3:+45053544 None:intergenic
CCCGAAATAAGTTGGCTGGA+TGG 0.536151 2.3:+45056454 None:intergenic
GATTTAAACAACATTTGGCT+AGG 0.537741 2.3:-45056999 MS.gene062059:CDS
GCTTTAGAAGCTCATTCCCA+TGG 0.538107 2.3:+45055834 None:intergenic
CTGGGAAAATGCTTGAAGAA+AGG 0.538331 2.3:-45056024 MS.gene062059:CDS
CCCTGGGTCAACATATCCTA+AGG 0.538425 2.3:+45057107 None:intergenic
ACGGAGTCTGCAGCTTGTAA+AGG 0.542641 2.3:+45056532 None:intergenic
AAAAGCGACCCGAAATAAGT+TGG 0.544977 2.3:+45056446 None:intergenic
CAAGTTGGGTGTAGAAGCAA+AGG 0.546966 2.3:-45057183 MS.gene062059:CDS
GGCATCAGATCCTTACCCTC+GGG 0.551027 2.3:+45056874 None:intergenic
AATATGAAATGGCATCGCAC+TGG 0.551192 2.3:-45056913 MS.gene062059:CDS
ACAACATGGAATAAGTTGCT+TGG 0.551673 2.3:-45054919 MS.gene062059:CDS
TCCTTAGGATATGTTGACCC+AGG 0.553110 2.3:-45057108 MS.gene062059:CDS
AAGAGCACTTACTTGCTGAC+TGG 0.555352 2.3:-45054671 MS.gene062059:CDS
TAGATGTGTAGAAGAGTGCA+TGG 0.555568 2.3:-45055930 MS.gene062059:CDS
TCTAAAGGGTTCCCATGAGC+TGG 0.557230 2.3:-45053627 MS.gene062059:CDS
TGTGGGAAAGTTGTTAGTGG+TGG 0.558139 2.3:-45057396 MS.gene062059:CDS
GTAGAAGAGTGCATGGAAAA+GGG 0.564298 2.3:-45055923 MS.gene062059:CDS
TGGTCAATATGGACAAGGAC+TGG 0.565647 2.3:-45056482 MS.gene062059:CDS
CTATTCATGGCGATGATGCA+CGG 0.567695 2.3:-45055514 MS.gene062059:CDS
ATGGCTCCAATACGCTCCAC+AGG 0.568838 2.3:-45057489 MS.gene062059:CDS
AGGCATCAGATCCTTACCCT+CGG 0.574066 2.3:+45056873 None:intergenic
CTTTAGAAGCTCATTCCCAT+GGG 0.577632 2.3:+45055835 None:intergenic
AATCTTGATCTTCTCAACGC+TGG 0.579689 2.3:+45056694 None:intergenic
ACCACTGCACAAAGCTCTGA+TGG 0.580910 2.3:-45054639 MS.gene062059:CDS
AATGAGCTTCTAAAGCCAGC+TGG 0.582059 2.3:-45055827 MS.gene062059:CDS
AAACAACTAAAGGTTAAGAC+AGG 0.582514 2.3:-45056622 MS.gene062059:CDS
GGAAGAAAATGCAGTATGTG+AGG 0.583624 2.3:-45055646 MS.gene062059:CDS
GAGCTGGTTACTATGGCTGA+TGG 0.584016 2.3:-45053611 MS.gene062059:CDS
AAATGCTTGAAGAAAGGAGA+AGG 0.584761 2.3:-45056018 MS.gene062059:CDS
AAAATGAAGGAAAATCTGGA+AGG 0.590836 2.3:-45057291 MS.gene062059:CDS
AGCAAAGCTAGAAGCACACT+GGG 0.592642 2.3:+45055802 None:intergenic
AGCCATAGTAACCAGCTCAT+GGG 0.593805 2.3:+45053616 None:intergenic
AGGTTAGATGCAATTACTGT+GGG 0.594300 2.3:-45057413 MS.gene062059:CDS
TGTTACTTCACCAGAAACTC+GGG 0.594532 2.3:+45057347 None:intergenic
ACTATGGCTGATGGAGCAGT+AGG 0.594939 2.3:-45053602 MS.gene062059:CDS
TAGCAAAGCTAGAAGCACAC+TGG 0.595235 2.3:+45055801 None:intergenic
TCTTGAGCTGAATTATAATG+AGG 0.598079 2.3:+45055107 None:intergenic
ACCATCAGAGCTTTGTGCAG+TGG 0.599060 2.3:+45054638 None:intergenic
AAAGGAAAGCAATTGATGGA+TGG 0.603413 2.3:-45057165 MS.gene062059:CDS
AGGTTCTCCAGTTCAAGCCA+GGG 0.607330 2.3:-45055707 MS.gene062059:CDS
AGGATATGTTGACCCAGGGT+GGG 0.611188 2.3:-45057103 MS.gene062059:CDS
GTTGACCCAGGGTGGGAACA+CGG 0.611332 2.3:-45057096 MS.gene062059:CDS
TGAAAAGTGAATTTACCCAT+GGG 0.616274 2.3:-45055850 MS.gene062059:CDS
ACAAAGCTCTGATGGTGACA+AGG 0.616552 2.3:-45054631 MS.gene062059:intron
TCTTGACGATATCGGTATGA+CGG 0.616642 2.3:+45055404 None:intergenic
CCTTAGGATATGTTGACCCA+GGG 0.617378 2.3:-45057107 MS.gene062059:CDS
AAATGAAGGAAAATCTGGAA+GGG 0.618504 2.3:-45057290 MS.gene062059:CDS
AAGGTTAGATGCAATTACTG+TGG 0.618593 2.3:-45057414 MS.gene062059:CDS
TTGTAGAACATTCTCAGCAG+AGG 0.619249 2.3:+45054692 None:intergenic
GCTGCTTGGTGGCAACAACA+TGG 0.620763 2.3:-45054933 MS.gene062059:CDS
GAAATATGAGCCATTCTGGA+AGG 0.621062 2.3:-45055492 MS.gene062059:CDS
GAAGACGATGAAGAGCAAGT+TGG 0.621085 2.3:-45057198 MS.gene062059:CDS
TAGGATATGTTGACCCAGGG+TGG 0.622379 2.3:-45057104 MS.gene062059:CDS
ACAAGAACAGGTCTTGAACC+AGG 0.622503 2.3:-45055056 MS.gene062059:intron
CGAACAACCAGTGATTGCCC+AGG 0.630440 2.3:+45056372 None:intergenic
GTTGGAGAGATGCACAGGGT+AGG 0.638423 2.3:-45056336 MS.gene062059:CDS
ACCAGGATCAACAAATCCTG+TGG 0.638687 2.3:+45057473 None:intergenic
TGTGAGAAAGTTGTTAGTGG+CGG 0.639509 2.3:-45057030 MS.gene062059:CDS
GTGTTTCAAAAGGTGTCTAG+TGG 0.640607 2.3:-45055599 MS.gene062059:CDS
TGTCTGACTTAATATGCGAA+CGG 0.644471 2.3:+45054881 None:intergenic
TGTATATAACGACTTGTACA+GGG 0.644698 2.3:-45055555 MS.gene062059:CDS
GCAATGCCATGATCCCAACC+AGG 0.647244 2.3:+45057456 None:intergenic
ATACTGTGAAAAGGCTCCGG+AGG 0.649046 2.3:-45057325 MS.gene062059:CDS
ACCCACTAAGAAATTACGCA+AGG 0.652287 2.3:-45056599 MS.gene062059:CDS
GTGGGAAAGTTGTTAGTGGT+GGG 0.655583 2.3:-45057395 MS.gene062059:CDS
ATGGCATTGCTCAAGATGAG+CGG 0.658795 2.3:-45057443 MS.gene062059:CDS
TGGTGCCAGTGACGATGAGT+CGG 0.666465 2.3:-45053549 MS.gene062059:CDS
TACTTTGCATCATATGAACA+AGG 0.667545 2.3:-45056800 MS.gene062059:CDS
GAAACAAAGTATACACCATG+AGG 0.669038 2.3:+45056286 None:intergenic
TTGGCTGGTCAATATGGACA+AGG 0.674064 2.3:-45056487 MS.gene062059:CDS
GGTTCTCCAGTTCAAGCCAG+GGG 0.675328 2.3:-45055706 MS.gene062059:CDS
AAAAGACATAGGCAACCCGA+GGG 0.683630 2.3:-45056889 MS.gene062059:CDS
ACATATCCTAAGGACCGAAG+AGG 0.686475 2.3:+45057117 None:intergenic
TTAATACAGTAGATAGCACA+AGG 0.717424 2.3:+45055980 None:intergenic
ACTATGATGATGGATCTGAA+AGG 0.723341 2.3:-45053652 MS.gene062059:CDS
TAGCATTCTGATGTAGTACG+TGG 0.728853 2.3:-45055285 MS.gene062059:CDS
CTTGTAAAGGAATTCCTGCG+TGG 0.735670 2.3:+45056545 None:intergenic
GATAGTTGGAGAGATGCACA+GGG 0.743814 2.3:-45056340 MS.gene062059:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GGTAATAATTAAATAATATA+AGG - chr2.3:45056590-45056609 MS.gene062059:CDS 10.0%
!!! ATTATCTTTTTCATTTTTTA+AGG + chr2.3:45057203-45057222 None:intergenic 10.0%
!!! TTATCTTTTTCATTTTTTAA+GGG + chr2.3:45057202-45057221 None:intergenic 10.0%
!! AAATAAAAGAGAATATGAAA+TGG - chr2.3:45054079-45054098 MS.gene062059:intron 15.0%
!! AACTAATATACAATCAAATA+TGG - chr2.3:45055117-45055136 MS.gene062059:intron 15.0%
!! TAATAGATTTAAACAACATT+TGG - chr2.3:45053999-45054018 MS.gene062059:intron 15.0%
!! TTATTATATGTTGAAACTAT+TGG - chr2.3:45057079-45057098 MS.gene062059:CDS 15.0%
!!! AACATATTTATTTAAGCTTT+TGG - chr2.3:45054773-45054792 MS.gene062059:CDS 15.0%
!!! ATATTAGTTTTGTAATTTTC+TGG + chr2.3:45055106-45055125 None:intergenic 15.0%
!!! TAATAAAAACTTACTTCTTT+TGG + chr2.3:45056651-45056670 None:intergenic 15.0%
!!! TATCTTTTTCATTTTTTAAG+GGG + chr2.3:45057201-45057220 None:intergenic 15.0%
!! ATACAAGTGTAATGAAAAAA+AGG - chr2.3:45056822-45056841 MS.gene062059:CDS 20.0%
!! CCATTAGAAAAATATTATTC+TGG + chr2.3:45055640-45055659 None:intergenic 20.0%
!! TATAAAACATATATAGTGCA+TGG + chr2.3:45056487-45056506 None:intergenic 20.0%
!!! ATTTTAAGATAAACTTCTTC+TGG + chr2.3:45054063-45054082 None:intergenic 20.0%
!!! CAGCATTTTATGAAAATATA+CGG + chr2.3:45054493-45054512 None:intergenic 20.0%
!!! CCAGAATAATATTTTTCTAA+TGG - chr2.3:45055637-45055656 MS.gene062059:CDS 20.0%
!!! TTTTTTCTTTTCTATTCTTG+TGG - chr2.3:45054848-45054867 MS.gene062059:CDS 20.0%
! AAACAAAATCTTGACGATAT+CGG + chr2.3:45055610-45055629 None:intergenic 25.0%
! AAGACAACTATAAATGTATC+AGG + chr2.3:45056435-45056454 None:intergenic 25.0%
! AAGTGTAATGAAAAAAAGGA+GGG - chr2.3:45056826-45056845 MS.gene062059:CDS 25.0%
! ACTTGTATCTGTAATTAATC+TGG - chr2.3:45054895-45054914 MS.gene062059:CDS 25.0%
! AGTTATTACCTACATCAAAA+GGG + chr2.3:45054934-45054953 None:intergenic 25.0%
! ATATCATATAGCAGTCATTA+AGG + chr2.3:45055817-45055836 None:intergenic 25.0%
! CAAAAATAGAATTTCTGTCT+TGG + chr2.3:45056719-45056738 None:intergenic 25.0%
! CAAGTTAATATTTACGATGA+AGG + chr2.3:45054880-45054899 None:intergenic 25.0%
! GAATGTTTCTTTCAAACAAA+TGG - chr2.3:45055264-45055283 MS.gene062059:CDS 25.0%
! GAATTATCTTGCTGAATATA+AGG - chr2.3:45054605-45054624 MS.gene062059:intron 25.0%
! GGATATTCTACAAAAACAAA+AGG + chr2.3:45057283-45057302 None:intergenic 25.0%
! TACAAGTCGTTATATACATA+TGG + chr2.3:45055446-45055465 None:intergenic 25.0%
! TCATGCAACAATTAAATATG+CGG - chr2.3:45055991-45056010 MS.gene062059:CDS 25.0%
! TGATACATTTATAGTTGTCT+TGG - chr2.3:45056434-45056453 MS.gene062059:CDS 25.0%
! TTCAGCAAGATAATTCTTAA+TGG + chr2.3:45054601-45054620 None:intergenic 25.0%
!! CAAGACAGAAATTCTATTTT+TGG - chr2.3:45056717-45056736 MS.gene062059:CDS 25.0%
!! CATTACACTTGTATTTTGTT+TGG + chr2.3:45056816-45056835 None:intergenic 25.0%
!! CGTATATTTTCATAAAATGC+TGG - chr2.3:45054491-45054510 MS.gene062059:intron 25.0%
!! TAGCAATAATTGCTGTTAAT+TGG - chr2.3:45056406-45056425 MS.gene062059:CDS 25.0%
!! TTTTCATAAAATGCTGGAAT+TGG - chr2.3:45054497-45054516 MS.gene062059:intron 25.0%
!! TTTTTGTAGAATATCCCTTT+TGG - chr2.3:45057287-45057306 MS.gene062059:CDS 25.0%
!!! AAGCTTTGATTGATAATGAT+AGG - chr2.3:45054226-45054245 MS.gene062059:intron 25.0%
!!! ATATCGTCAAGATTTTGTTT+CGG - chr2.3:45055610-45055629 MS.gene062059:CDS 25.0%
!!! TTGTTTTGAATGTCACATTT+TGG - chr2.3:45055336-45055355 MS.gene062059:intron 25.0%
!!! TTTTGAAACACTTGCAATAT+GGG + chr2.3:45055395-45055414 None:intergenic 25.0%
AAAAATAGAGTCTTGCTAAC+CGG + chr2.3:45056769-45056788 None:intergenic 30.0%
AAAATGAAGGAAAATCTGGA+AGG - chr2.3:45053712-45053731 MS.gene062059:intron 30.0%
AAACAACTAAAGGTTAAGAC+AGG - chr2.3:45054381-45054400 MS.gene062059:intron 30.0%
AAATGAAGGAAAATCTGGAA+GGG - chr2.3:45053713-45053732 MS.gene062059:intron 30.0%
ATCAGACCTGATATTAAATC+AGG - chr2.3:45056523-45056542 MS.gene062059:CDS 30.0%
ATCTAATGCAGTAATTTACC+TGG + chr2.3:45055968-45055987 None:intergenic 30.0%
ATGAAAAGTGAATTTACCCA+TGG - chr2.3:45055152-45055171 MS.gene062059:intron 30.0%
ATGTATATAACGACTTGTAC+AGG - chr2.3:45055447-45055466 MS.gene062059:CDS 30.0%
CAAGGTAATCAAAACCAAAA+GGG + chr2.3:45056955-45056974 None:intergenic 30.0%
CAAGTGTAATGAAAAAAAGG+AGG - chr2.3:45056825-45056844 MS.gene062059:CDS 30.0%
CAGTTATTACCTACATCAAA+AGG + chr2.3:45054935-45054954 None:intergenic 30.0%
CATATTGCAAGTGTTTCAAA+AGG - chr2.3:45055394-45055413 MS.gene062059:CDS 30.0%
CATTAACTTTCTTCTGTGAT+AGG + chr2.3:45056216-45056235 None:intergenic 30.0%
CCTAAAAATGAAGGAAAATC+TGG - chr2.3:45053708-45053727 MS.gene062059:CDS 30.0%
CTATATTGTACAAAAGTCCA+AGG + chr2.3:45056973-45056992 None:intergenic 30.0%
CTGTAAATTTAACTCCTCTT+CGG - chr2.3:45053872-45053891 MS.gene062059:intron 30.0%
CTTGCAATCAAATCTATTCA+TGG - chr2.3:45055476-45055495 MS.gene062059:CDS 30.0%
GACTATCCTGATTTAATATC+AGG + chr2.3:45056532-45056551 None:intergenic 30.0%
GATTCAATAGACTATGATGA+TGG - chr2.3:45057341-45057360 MS.gene062059:CDS 30.0%
GATTTAAACAACATTTGGCT+AGG - chr2.3:45054004-45054023 MS.gene062059:intron 30.0%
GTCATCGTTTCAAAGTTTAA+TGG - chr2.3:45056549-45056568 MS.gene062059:CDS 30.0%
GTTAATATTTACGATGAAGG+AGG + chr2.3:45054877-45054896 None:intergenic 30.0%
GTTATTACCTACATCAAAAG+GGG + chr2.3:45054933-45054952 None:intergenic 30.0%
TACTTTGCATCATATGAACA+AGG - chr2.3:45054203-45054222 MS.gene062059:intron 30.0%
TCAAACTTGCAAACAACTAA+AGG - chr2.3:45054371-45054390 MS.gene062059:intron 30.0%
TCATCTTCATTATCAGACTT+TGG + chr2.3:45054162-45054181 None:intergenic 30.0%
TCTTGAGCTGAATTATAATG+AGG + chr2.3:45055899-45055918 None:intergenic 30.0%
TGAAAAGTGAATTTACCCAT+GGG - chr2.3:45055153-45055172 MS.gene062059:intron 30.0%
TGAAGTAACATACTGTGAAA+AGG - chr2.3:45053669-45053688 MS.gene062059:CDS 30.0%
TGTATATAACGACTTGTACA+GGG - chr2.3:45055448-45055467 MS.gene062059:CDS 30.0%
TGTTACATGCAACATAAGTT+GGG - chr2.3:45057145-45057164 MS.gene062059:CDS 30.0%
TTAATACAGTAGATAGCACA+AGG + chr2.3:45055026-45055045 None:intergenic 30.0%
TTATCAGACTTTGGATAGAA+AGG + chr2.3:45054153-45054172 None:intergenic 30.0%
TTATTACCTACATCAAAAGG+GGG + chr2.3:45054932-45054951 None:intergenic 30.0%
TTCAAAAGTCGAACTCAATT+TGG - chr2.3:45057040-45057059 MS.gene062059:CDS 30.0%
TTCTTCTATAAAACTCCTGA+GGG - chr2.3:45056879-45056898 MS.gene062059:CDS 30.0%
TTGTTACATGCAACATAAGT+TGG - chr2.3:45057144-45057163 MS.gene062059:CDS 30.0%
TTTCTTCTATAAAACTCCTG+AGG - chr2.3:45056878-45056897 MS.gene062059:CDS 30.0%
! AGTTTGAAGATTCTGATTTG+TGG + chr2.3:45054358-45054377 None:intergenic 30.0%
! GTTTGAAGATTCTGATTTGT+GGG + chr2.3:45054357-45054376 None:intergenic 30.0%
! TTTTTGTCATCCTCTTTACT+TGG - chr2.3:45055559-45055578 MS.gene062059:CDS 30.0%
!! CCAGATTTTCCTTCATTTTT+AGG + chr2.3:45053711-45053730 None:intergenic 30.0%
!!! CTTTTGAAACACTTGCAATA+TGG + chr2.3:45055396-45055415 None:intergenic 30.0%
AAAGGAAAGCAATTGATGGA+TGG - chr2.3:45053838-45053857 MS.gene062059:intron 35.0%
AAAGTTTAATGGTCTGACCA+GGG - chr2.3:45056560-45056579 MS.gene062059:CDS 35.0%
AAATGCTTGAAGAAAGGAGA+AGG - chr2.3:45054985-45055004 MS.gene062059:intron 35.0%
AAGCAAAGGAAAGCAATTGA+TGG - chr2.3:45053834-45053853 MS.gene062059:intron 35.0%
AAGGTTAGATGCAATTACTG+TGG - chr2.3:45053589-45053608 MS.gene062059:CDS 35.0%
AATTCAGCTCAAGATGACTT+TGG - chr2.3:45055905-45055924 MS.gene062059:CDS 35.0%
ACAACATGGAATAAGTTGCT+TGG - chr2.3:45056084-45056103 MS.gene062059:intron 35.0%
AGATACAGGAAAGACCTTTA+AGG - chr2.3:45054260-45054279 MS.gene062059:intron 35.0%
AGGAGATACTGTAAAGATAC+AGG - chr2.3:45054246-45054265 MS.gene062059:intron 35.0%
AGGTTAGATGCAATTACTGT+GGG - chr2.3:45053590-45053609 MS.gene062059:CDS 35.0%
ATTAGAGGACATTCCCTTAA+AGG + chr2.3:45054277-45054296 None:intergenic 35.0%
CAATCAGATATCCACATTGT+TGG + chr2.3:45057254-45057273 None:intergenic 35.0%
CATCTAGATCAACACCAAAA+GGG + chr2.3:45057304-45057323 None:intergenic 35.0%
CCAAGGTAATCAAAACCAAA+AGG + chr2.3:45056956-45056975 None:intergenic 35.0%
CCAAGTAAGAAAAAGGTCTA+GGG - chr2.3:45056276-45056295 MS.gene062059:CDS 35.0%
GAAACAAAGTATACACCATG+AGG + chr2.3:45054720-45054739 None:intergenic 35.0%
GAGAATGCCAAGTAAGAAAA+AGG - chr2.3:45056269-45056288 MS.gene062059:CDS 35.0%
GATACAGGAAAGACCTTTAA+GGG - chr2.3:45054261-45054280 MS.gene062059:intron 35.0%
GGAAGTCTACCTAAAAATGA+AGG - chr2.3:45053699-45053718 MS.gene062059:CDS 35.0%
GTCTGAATGAATGCATTGTT+CGG - chr2.3:45055740-45055759 MS.gene062059:CDS 35.0%
TACTGTGAGAAAGTTGTTAG+TGG - chr2.3:45053970-45053989 MS.gene062059:intron 35.0%
TCATCTAGATCAACACCAAA+AGG + chr2.3:45057305-45057324 None:intergenic 35.0%
TCCTTGCGTAATTTCTTAGT+GGG + chr2.3:45054408-45054427 None:intergenic 35.0%
TGCAACAATTAAATATGCGG+AGG - chr2.3:45055994-45056013 MS.gene062059:CDS 35.0%
TGCATCTTCAACTACATTAG+TGG + chr2.3:45054754-45054773 None:intergenic 35.0%
TGCTACATTGCAGAATTTGT+TGG - chr2.3:45055220-45055239 MS.gene062059:intron 35.0%
TGTCTGACTTAATATGCGAA+CGG + chr2.3:45056125-45056144 None:intergenic 35.0%
TTCCTTGCGTAATTTCTTAG+TGG + chr2.3:45054409-45054428 None:intergenic 35.0%
! AAAGGAGAAGGAATTTGTTC+TGG - chr2.3:45054997-45055016 MS.gene062059:intron 35.0%
! AATCACTGGTTGTTCGATAA+TGG - chr2.3:45054638-45054657 MS.gene062059:CDS 35.0%
! ATGTTACTTCACCAGAAACT+CGG + chr2.3:45053660-45053679 None:intergenic 35.0%
! GACAAAGTAGTGGAAGAAAT+AGG - chr2.3:45054795-45054814 MS.gene062059:CDS 35.0%
! TAAGCTTTTGGACAAAGTAG+TGG - chr2.3:45054785-45054804 MS.gene062059:CDS 35.0%
! TTTCTTGTTTCATCTCCTCA+TGG - chr2.3:45054702-45054721 MS.gene062059:CDS 35.0%
!! ACTATGATGATGGATCTGAA+AGG - chr2.3:45057351-45057370 MS.gene062059:CDS 35.0%
!! AGATGACTTTGGAACTGAAT+TGG - chr2.3:45055916-45055935 MS.gene062059:CDS 35.0%
!!! ATTTTTAGGTAGACTTCCTC+CGG + chr2.3:45053697-45053716 None:intergenic 35.0%
!!! CCTTTTGGTTTTGATTACCT+TGG - chr2.3:45056953-45056972 MS.gene062059:CDS 35.0%
AAAAGCGACCCGAAATAAGT+TGG + chr2.3:45054560-45054579 None:intergenic 40.0%
AACATACTGTGAAAAGGCTC+CGG - chr2.3:45053675-45053694 MS.gene062059:CDS 40.0%
AAGACGATGAAGAGCAAGTT+GGG - chr2.3:45053806-45053825 MS.gene062059:intron 40.0%
AAGCAGCTAGTGAGGTAAAA+AGG + chr2.3:45056057-45056076 None:intergenic 40.0%
AAGTAAGCAGCCAAGTAAAG+AGG + chr2.3:45055572-45055591 None:intergenic 40.0%
AATATGAAATGGCATCGCAC+TGG - chr2.3:45054090-45054109 MS.gene062059:intron 40.0%
AATCTTGATCTTCTCAACGC+TGG + chr2.3:45054312-45054331 None:intergenic 40.0%
ACAACATTTGGCTAGGATTC+CGG - chr2.3:45054011-45054030 MS.gene062059:intron 40.0%
ACCCACTAAGAAATTACGCA+AGG - chr2.3:45054404-45054423 MS.gene062059:intron 40.0%
ACTCCTAACTATAAAGCTGC+TGG - chr2.3:45054960-45054979 MS.gene062059:intron 40.0%
AGCAGCTAGTGAGGTAAAAA+GGG + chr2.3:45056056-45056075 None:intergenic 40.0%
AGGTGAAGAAAATGTAGTGC+AGG - chr2.3:45054815-45054834 MS.gene062059:CDS 40.0%
ATCGCACTGGAAAAAGACAT+AGG - chr2.3:45054103-45054122 MS.gene062059:intron 40.0%
CAAACAAATGGATGTCATCC+AGG - chr2.3:45055276-45055295 MS.gene062059:CDS 40.0%
CAAAGTTTAATGGTCTGACC+AGG - chr2.3:45056559-45056578 MS.gene062059:CDS 40.0%
CATAAAATGCTGGAATTGGC+TGG - chr2.3:45054501-45054520 MS.gene062059:intron 40.0%
CTACATCAAAAGGGGGAATT+AGG + chr2.3:45054925-45054944 None:intergenic 40.0%
CTCCTAACTATAAAGCTGCT+GGG - chr2.3:45054961-45054980 MS.gene062059:intron 40.0%
CTGGGAAAATGCTTGAAGAA+AGG - chr2.3:45054979-45054998 MS.gene062059:intron 40.0%
GAAATATGAGCCATTCTGGA+AGG - chr2.3:45055511-45055530 MS.gene062059:CDS 40.0%
GCAGATCATGCTAACATTGA+TGG - chr2.3:45057434-45057453 MS.gene062059:CDS 40.0%
GCCAAGTAAGAAAAAGGTCT+AGG - chr2.3:45056275-45056294 MS.gene062059:CDS 40.0%
GGAAGAAAATGCAGTATGTG+AGG - chr2.3:45055357-45055376 MS.gene062059:intron 40.0%
TACTGTGGGAAAGTTGTTAG+TGG - chr2.3:45053604-45053623 MS.gene062059:CDS 40.0%
TAGCATTCTGATGTAGTACG+TGG - chr2.3:45055718-45055737 MS.gene062059:CDS 40.0%
TCAAGATGAGCGGAAAAAGA+AGG - chr2.3:45053570-45053589 MS.gene062059:CDS 40.0%
TCTTGACGATATCGGTATGA+CGG + chr2.3:45055602-45055621 None:intergenic 40.0%
TGCTGAATATAAGGCTTCCT+GGG - chr2.3:45054614-45054633 MS.gene062059:intron 40.0%
TGTGAGAAAGTTGTTAGTGG+CGG - chr2.3:45053973-45053992 MS.gene062059:intron 40.0%
TTGCTGAATATAAGGCTTCC+TGG - chr2.3:45054613-45054632 MS.gene062059:intron 40.0%
TTGGCAATTAGCACAAGAAC+AGG - chr2.3:45055935-45055954 MS.gene062059:CDS 40.0%
TTGTAGAACATTCTCAGCAG+AGG + chr2.3:45056314-45056333 None:intergenic 40.0%
! CCCTAGACCTTTTTCTTACT+TGG + chr2.3:45056279-45056298 None:intergenic 40.0%
! CTAATTCCCCCTTTTGATGT+AGG - chr2.3:45054923-45054942 MS.gene062059:CDS 40.0%
! CTTTAGAAGCTCATTCCCAT+GGG + chr2.3:45055171-45055190 None:intergenic 40.0%
! CTTTTGCATGTGAGCATGAT+GGG - chr2.3:45056152-45056171 MS.gene062059:intron 40.0%
! GTAGAAGAGTGCATGGAAAA+GGG - chr2.3:45055080-45055099 MS.gene062059:CDS 40.0%
! GTTCGATAATGGCTGATAGT+TGG - chr2.3:45054649-45054668 MS.gene062059:CDS 40.0%
! TAGATGTGTAGAAGAGTGCA+TGG - chr2.3:45055073-45055092 MS.gene062059:CDS 40.0%
! TCTTTTGCATGTGAGCATGA+TGG - chr2.3:45056151-45056170 MS.gene062059:intron 40.0%
! TGTAGAAGAGTGCATGGAAA+AGG - chr2.3:45055079-45055098 MS.gene062059:CDS 40.0%
! TGTTACTTCACCAGAAACTC+GGG + chr2.3:45053659-45053678 None:intergenic 40.0%
! TTCCCAGCAGCTTTATAGTT+AGG + chr2.3:45054966-45054985 None:intergenic 40.0%
! TTTTTACCTCACTAGCTGCT+TGG - chr2.3:45056056-45056075 MS.gene062059:CDS 40.0%
!! AATTATTACCGGTTCAACCC+TGG + chr2.3:45056580-45056599 None:intergenic 40.0%
!! AGGATTTGTTGATCCTGGTT+GGG - chr2.3:45053534-45053553 MS.gene062059:CDS 40.0%
!! GGATCTGAAAGGCATCTAAA+GGG - chr2.3:45057362-45057381 MS.gene062059:CDS 40.0%
!! GTGTTTCAAAAGGTGTCTAG+TGG - chr2.3:45055404-45055423 MS.gene062059:CDS 40.0%
!! TGGATCTGAAAGGCATCTAA+AGG - chr2.3:45057361-45057380 MS.gene062059:CDS 40.0%
!!! TCTTCTGGAGCACTTTTACA+AGG + chr2.3:45054048-45054067 None:intergenic 40.0%
AAAAAGACATAGGCAACCCG+AGG - chr2.3:45054113-45054132 MS.gene062059:intron 45.0%
AAAAGACATAGGCAACCCGA+GGG - chr2.3:45054114-45054133 MS.gene062059:intron 45.0%
AAAGGGCCAGTTTGACAAGT+TGG + chr2.3:45056938-45056957 None:intergenic 45.0%
AAGGGCCAGTTTGACAAGTT+GGG + chr2.3:45056937-45056956 None:intergenic 45.0%
ACAAATCCTGTGGAGCGTAT+TGG + chr2.3:45053523-45053542 None:intergenic 45.0%
ACAAGAACAGGTCTTGAACC+AGG - chr2.3:45055947-45055966 MS.gene062059:CDS 45.0%
ACATATCCTAAGGACCGAAG+AGG + chr2.3:45053889-45053908 None:intergenic 45.0%
ACCAGGATCAACAAATCCTG+TGG + chr2.3:45053533-45053552 None:intergenic 45.0%
AGCCATAGTAACCAGCTCAT+GGG + chr2.3:45057390-45057409 None:intergenic 45.0%
AGGAGAATGCTAAACAGTCC+AGG - chr2.3:45056610-45056629 MS.gene062059:CDS 45.0%
ATGGCATTGCTCAAGATGAG+CGG - chr2.3:45053560-45053579 MS.gene062059:CDS 45.0%
ATTTCTTAACGAGTGCCTCG+GGG - chr2.3:45056740-45056759 MS.gene062059:CDS 45.0%
CAACATTTGGCTAGGATTCC+GGG - chr2.3:45054012-45054031 MS.gene062059:intron 45.0%
CACGGAAATATGAGCCATTC+TGG - chr2.3:45055507-45055526 MS.gene062059:CDS 45.0%
CCATCCAGCCAACTTATTTC+GGG - chr2.3:45054549-45054568 MS.gene062059:intron 45.0%
CCCATCCAGCCAACTTATTT+CGG - chr2.3:45054548-45054567 MS.gene062059:intron 45.0%
CCTTAGGATATGTTGACCCA+GGG - chr2.3:45053896-45053915 MS.gene062059:intron 45.0%
CTATTCATGGCGATGATGCA+CGG - chr2.3:45055489-45055508 MS.gene062059:CDS 45.0%
CTGTCTATCACCTTCCAGAA+TGG + chr2.3:45055524-45055543 None:intergenic 45.0%
CTTCGCTGCTGACAAACATA+TGG + chr2.3:45057229-45057248 None:intergenic 45.0%
CTTGTAAAGGAATTCCTGCG+TGG + chr2.3:45054461-45054480 None:intergenic 45.0%
GAAGACGATGAAGAGCAAGT+TGG - chr2.3:45053805-45053824 MS.gene062059:intron 45.0%
GAGAATGCTAAACAGTCCAG+GGG - chr2.3:45056612-45056631 MS.gene062059:CDS 45.0%
GATAGTTGGAGAGATGCACA+GGG - chr2.3:45054663-45054682 MS.gene062059:CDS 45.0%
GATTTCTTAACGAGTGCCTC+GGG - chr2.3:45056739-45056758 MS.gene062059:CDS 45.0%
GGAGAATGCTAAACAGTCCA+GGG - chr2.3:45056611-45056630 MS.gene062059:CDS 45.0%
GGATTTCTTAACGAGTGCCT+CGG - chr2.3:45056738-45056757 MS.gene062059:CDS 45.0%
GTGGGAAAGTTGTTAGTGGT+GGG - chr2.3:45053608-45053627 MS.gene062059:CDS 45.0%
TCCTTAGGATATGTTGACCC+AGG - chr2.3:45053895-45053914 MS.gene062059:intron 45.0%
TGATAGTTGGAGAGATGCAC+AGG - chr2.3:45054662-45054681 MS.gene062059:CDS 45.0%
TGGTCAATATGGACAAGGAC+TGG - chr2.3:45054521-45054540 MS.gene062059:intron 45.0%
TGTGGGAAAGTTGTTAGTGG+TGG - chr2.3:45053607-45053626 MS.gene062059:CDS 45.0%
TTAACTCCTCTTCGGTCCTT+AGG - chr2.3:45053880-45053899 MS.gene062059:intron 45.0%
TTCCCATGAGCTGGTTACTA+TGG - chr2.3:45057385-45057404 MS.gene062059:CDS 45.0%
TTCGAGACTGGAAACAGATC+CGG - chr2.3:45056904-45056923 MS.gene062059:CDS 45.0%
! ACAAAGCTCTGATGGTGACA+AGG - chr2.3:45056372-45056391 MS.gene062059:CDS 45.0%
! ACTTGTCAAACTGGCCCTTT+TGG - chr2.3:45056938-45056957 MS.gene062059:CDS 45.0%
! AGCAAAGCTAGAAGCACACT+GGG + chr2.3:45055204-45055223 None:intergenic 45.0%
! CAAGTTGGGTGTAGAAGCAA+AGG - chr2.3:45053820-45053839 MS.gene062059:intron 45.0%
! CATTCTGGAAGGTGATAGAC+AGG - chr2.3:45055522-45055541 MS.gene062059:CDS 45.0%
! CCGAAATAAGTTGGCTGGAT+GGG + chr2.3:45054551-45054570 None:intergenic 45.0%
! CTGGAATTGGCTGGTCAATA+TGG - chr2.3:45054510-45054529 MS.gene062059:intron 45.0%
! GAAAGCAATTGATGGATGGC+AGG - chr2.3:45053842-45053861 MS.gene062059:intron 45.0%
! TAGCAAAGCTAGAAGCACAC+TGG + chr2.3:45055205-45055224 None:intergenic 45.0%
! TTGGCTGGTCAATATGGACA+AGG - chr2.3:45054516-45054535 MS.gene062059:intron 45.0%
!! AAGAGCACTTACTTGCTGAC+TGG - chr2.3:45056332-45056351 MS.gene062059:CDS 45.0%
!! AATGAGCTTCTAAAGCCAGC+TGG - chr2.3:45055176-45055195 MS.gene062059:intron 45.0%
!! ATCTTCTCAACGCTGGTTCT+GGG + chr2.3:45054305-45054324 None:intergenic 45.0%
!! CAGGATTTGTTGATCCTGGT+TGG - chr2.3:45053533-45053552 MS.gene062059:CDS 45.0%
!! GCTTTAGAAGCTCATTCCCA+TGG + chr2.3:45055172-45055191 None:intergenic 45.0%
!! TCCACAGGATTTGTTGATCC+TGG - chr2.3:45053529-45053548 MS.gene062059:CDS 45.0%
!! TGGTTCTGGGCTAGTATTAG+AGG + chr2.3:45054292-45054311 None:intergenic 45.0%
!!! TATTTCGGGTCGCTTTTTGC+AGG - chr2.3:45054563-45054582 MS.gene062059:intron 45.0%
!!! TTTTTTGCACCTCTTTCCCC+TGG + chr2.3:45055316-45055335 None:intergenic 45.0%
!! TTATATTATTTAATTATTAC+CGG + chr2.3:45056591-45056610 None:intergenic 5.0%
!!! TATATATGTTTTATAAATAA+AGG - chr2.3:45056492-45056511 MS.gene062059:CDS 5.0%
ACGGAGTCTGCAGCTTGTAA+AGG + chr2.3:45054474-45054493 None:intergenic 50.0%
ACTATGGCTGATGGAGCAGT+AGG - chr2.3:45057401-45057420 MS.gene062059:CDS 50.0%
AGATGACGAGTATGAGCAGC+AGG - chr2.3:45054176-45054195 MS.gene062059:intron 50.0%
AGGATATGTTGACCCAGGGT+GGG - chr2.3:45053900-45053919 MS.gene062059:intron 50.0%
AGGCATCAGATCCTTACCCT+CGG + chr2.3:45054133-45054152 None:intergenic 50.0%
AGGTTCTCCAGTTCAAGCCA+GGG - chr2.3:45055296-45055315 MS.gene062059:intron 50.0%
ATACTGTGAAAAGGCTCCGG+AGG - chr2.3:45053678-45053697 MS.gene062059:CDS 50.0%
CAGCATTTAGCCCGAGTTTC+TGG - chr2.3:45053646-45053665 MS.gene062059:CDS 50.0%
CAGCCATAGTAACCAGCTCA+TGG + chr2.3:45057391-45057410 None:intergenic 50.0%
CCCTGGGTCAACATATCCTA+AGG + chr2.3:45053899-45053918 None:intergenic 50.0%
CTGGAAACAGATCCGGTTTC+CGG - chr2.3:45056911-45056930 MS.gene062059:CDS 50.0%
GAGCTGGTTACTATGGCTGA+TGG - chr2.3:45057392-45057411 MS.gene062059:CDS 50.0%
GTTGATCCTGGTTGGGATCA+TGG - chr2.3:45053541-45053560 MS.gene062059:CDS 50.0%
TAGGATATGTTGACCCAGGG+TGG - chr2.3:45053899-45053918 MS.gene062059:intron 50.0%
TCTAAAGGGTTCCCATGAGC+TGG - chr2.3:45057376-45057395 MS.gene062059:CDS 50.0%
TTACCTCACTAGCTGCTTGG+TGG - chr2.3:45056059-45056078 MS.gene062059:CDS 50.0%
TTTCTTAACGAGTGCCTCGG+GGG - chr2.3:45056741-45056760 MS.gene062059:CDS 50.0%
! ACCACTGCACAAAGCTCTGA+TGG - chr2.3:45056364-45056383 MS.gene062059:CDS 50.0%
! ACCATCAGAGCTTTGTGCAG+TGG + chr2.3:45056368-45056387 None:intergenic 50.0%
! CCCGAAATAAGTTGGCTGGA+TGG + chr2.3:45054552-45054571 None:intergenic 50.0%
! TGCAAGTTCTTTTGCCACGC+AGG - chr2.3:45054444-45054463 MS.gene062059:intron 50.0%
! TTACAAGGTGCTACCTCTCC+CGG + chr2.3:45054033-45054052 None:intergenic 50.0%
!! GATCTTCTCAACGCTGGTTC+TGG + chr2.3:45054306-45054325 None:intergenic 50.0%
AAGGCTTCCTGGGCAATCAC+TGG - chr2.3:45054624-45054643 MS.gene062059:intron 55.0%
ACATAGGCAACCCGAGGGTA+AGG - chr2.3:45054119-45054138 MS.gene062059:intron 55.0%
ATGGCTCCAATACGCTCCAC+AGG - chr2.3:45053514-45053533 MS.gene062059:CDS 55.0%
CAGATCCGACTCATCGTCAC+TGG + chr2.3:45057462-45057481 None:intergenic 55.0%
CAGGTTCTCCAGTTCAAGCC+AGG - chr2.3:45055295-45055314 MS.gene062059:intron 55.0%
CAGTTCAAGCCAGGGGAAAG+AGG - chr2.3:45055304-45055323 MS.gene062059:intron 55.0%
CGAACAACCAGTGATTGCCC+AGG + chr2.3:45054634-45054653 None:intergenic 55.0%
GCAATGCCATGATCCCAACC+AGG + chr2.3:45053550-45053569 None:intergenic 55.0%
GGCATCAGATCCTTACCCTC+GGG + chr2.3:45054132-45054151 None:intergenic 55.0%
GGTTCTCCAGTTCAAGCCAG+GGG - chr2.3:45055297-45055316 MS.gene062059:intron 55.0%
GTTGGAGAGATGCACAGGGT+AGG - chr2.3:45054667-45054686 MS.gene062059:CDS 55.0%
TCCGGCCCAACTTGTCAAAC+TGG - chr2.3:45056929-45056948 MS.gene062059:CDS 55.0%
TGGTCTGACCAGGGTTGAAC+CGG - chr2.3:45056569-45056588 MS.gene062059:CDS 55.0%
TGGTGCATAACCAATGCCCC+TGG + chr2.3:45056631-45056650 None:intergenic 55.0%
TTCCAGTCTCGAAGACCCTC+AGG + chr2.3:45056897-45056916 None:intergenic 55.0%
TTGCCACCAAGCAGCTAGTG+AGG + chr2.3:45056065-45056084 None:intergenic 55.0%
TTTGGCTAGGATTCCGGGAG+AGG - chr2.3:45054017-45054036 MS.gene062059:intron 55.0%
! CTCTTTCCCCTGGCTTGAAC+TGG + chr2.3:45055306-45055325 None:intergenic 55.0%
! CTGGCTTGAACTGGAGAACC+TGG + chr2.3:45055297-45055316 None:intergenic 55.0%
! GCAGCGAAGCACCAACAATG+TGG - chr2.3:45057240-45057259 MS.gene062059:CDS 55.0%
! GCCAGTTTGACAAGTTGGGC+CGG + chr2.3:45056933-45056952 None:intergenic 55.0%
! GCGACCCGAAATAAGTTGGC+TGG + chr2.3:45054556-45054575 None:intergenic 55.0%
! GCTAAACAGTCCAGGGGCAT+TGG - chr2.3:45056618-45056637 MS.gene062059:CDS 55.0%
! GCTGCTTGGTGGCAACAACA+TGG - chr2.3:45056070-45056089 MS.gene062059:intron 55.0%
! TGACAAGTTGGGCCGGAAAC+CGG + chr2.3:45056926-45056945 None:intergenic 55.0%
! TGGTGCCAGTGACGATGAGT+CGG - chr2.3:45057454-45057473 MS.gene062059:CDS 55.0%
!!! TTCGGGTCGCTTTTTGCAGG+AGG - chr2.3:45054566-45054585 MS.gene062059:intron 55.0%
CAACACCGTGTTCCCACCCT+GGG + chr2.3:45053915-45053934 None:intergenic 60.0%
CTCCTGAGGGTCTTCGAGAC+TGG - chr2.3:45056892-45056911 MS.gene062059:CDS 60.0%
GTTGACCCAGGGTGGGAACA+CGG - chr2.3:45053907-45053926 MS.gene062059:intron 60.0%
!! GTGGGAACACGGTGTTGCTC+AGG - chr2.3:45053918-45053937 MS.gene062059:intron 60.0%
GAAGCACACTGGGTGCCAGC+TGG + chr2.3:45055194-45055213 None:intergenic 65.0%
GCAACACCGTGTTCCCACCC+TGG + chr2.3:45053916-45053935 None:intergenic 65.0%
CTTGCTAACCGGTGCCCCCG+AGG + chr2.3:45056758-45056777 None:intergenic 70.0%
! AACGAGTGCCTCGGGGGCAC+CGG - chr2.3:45056747-45056766 MS.gene062059:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 45053514 45057511 45053514 ID=MS.gene062059
chr2.3 mRNA 45053514 45057511 45053514 ID=MS.gene062059.t1;Parent=MS.gene062059
chr2.3 exon 45056189 45057511 45056189 ID=MS.gene062059.t1.exon1;Parent=MS.gene062059.t1
chr2.3 CDS 45056189 45057511 45056189 ID=cds.MS.gene062059.t1;Parent=MS.gene062059.t1
chr2.3 exon 45055394 45056080 45055394 ID=MS.gene062059.t1.exon2;Parent=MS.gene062059.t1
chr2.3 CDS 45055394 45056080 45055394 ID=cds.MS.gene062059.t1;Parent=MS.gene062059.t1
chr2.3 exon 45055221 45055304 45055221 ID=MS.gene062059.t1.exon3;Parent=MS.gene062059.t1
chr2.3 CDS 45055221 45055304 45055221 ID=cds.MS.gene062059.t1;Parent=MS.gene062059.t1
chr2.3 exon 45055057 45055132 45055057 ID=MS.gene062059.t1.exon4;Parent=MS.gene062059.t1
chr2.3 CDS 45055057 45055132 45055057 ID=cds.MS.gene062059.t1;Parent=MS.gene062059.t1
chr2.3 exon 45054632 45054954 45054632 ID=MS.gene062059.t1.exon5;Parent=MS.gene062059.t1
chr2.3 CDS 45054632 45054954 45054632 ID=cds.MS.gene062059.t1;Parent=MS.gene062059.t1
chr2.3 exon 45053514 45053729 45053514 ID=MS.gene062059.t1.exon6;Parent=MS.gene062059.t1
chr2.3 CDS 45053514 45053729 45053514 ID=cds.MS.gene062059.t1;Parent=MS.gene062059.t1
Gene Sequence

>MS.gene062059

ATGGCTCCAATACGCTCCACAGGATTTGTTGATCCTGGTTGGGATCATGGCATTGCTCAAGATGAGCGGAAAAAGAAGGTTAGATGCAATTACTGTGGGAAAGTTGTTAGTGGTGGGATATACAGATTAAAGCAGCATTTAGCCCGAGTTTCTGGTGAAGTAACATACTGTGAAAAGGCTCCGGAGGAAGTCTACCTAAAAATGAAGGAAAATCTGGAAGGGTGTCGTTCAAATAAGAAACAAAAGCAAGTTGATGCACAAGCATATATGAATTTTCAGTCTAATGATGATGAAGACGATGAAGAGCAAGTTGGGTGTAGAAGCAAAGGAAAGCAATTGATGGATGGCAGGAATGTATCTGTAAATTTAACTCCTCTTCGGTCCTTAGGATATGTTGACCCAGGGTGGGAACACGGTGTTGCTCAGGATGAGAGAAAGAAAAAAGTCAAATGCAGTTACTGTGAGAAAGTTGTTAGTGGCGGTATTAATAGATTTAAACAACATTTGGCTAGGATTCCGGGAGAGGTAGCACCTTGTAAAAGTGCTCCAGAAGAAGTTTATCTTAAAATAAAAGAGAATATGAAATGGCATCGCACTGGAAAAAGACATAGGCAACCCGAGGGTAAGGATCTGATGCCTTTCTATCCAAAGTCTGATAATGAAGATGACGAGTATGAGCAGCAGGAAGATACTTTGCATCATATGAACAAGGAAGCTTTGATTGATAATGATAGGAGATACTGTAAAGATACAGGAAAGACCTTTAAGGGAATGTCCTCTAATACTAGCCCAGAACCAGCGTTGAGAAGATCAAGATTAGATAGTTTTTACTTGAAACATCCCACAAATCAGAATCTTCAAACTTGCAAACAACTAAAGGTTAAGACAGGACCCACTAAGAAATTACGCAAGGAACTTTTTTCTTCAATTTGCAAGTTCTTTTGCCACGCAGGAATTCCTTTACAAGCTGCAGACTCCGTATATTTTCATAAAATGCTGGAATTGGCTGGTCAATATGGACAAGGACTGGCATGCCCATCCAGCCAACTTATTTCGGGTCGCTTTTTGCAGGAGGAAATCAATTCCATTAAGAATTATCTTGCTGAATATAAGGCTTCCTGGGCAATCACTGGTTGTTCGATAATGGCTGATAGTTGGAGAGATGCACAGGGTAGGACAATTATTAACTTTCTTGTTTCATCTCCTCATGGTGTATACTTTGTTTCTTCAGTAGATGCCACTAATGTAGTTGAAGATGCAACATATTTATTTAAGCTTTTGGACAAAGTAGTGGAAGAAATAGGTGAAGAAAATGTAGTGCAGGTAAAATGTTTTTTTTTCTTTTCTATTCTTGTGGCATCCTCCTTCATCGTAAATATTAACTTGTATCTGTAATTAATCTGGTTCTCCTAATTCCCCCTTTTGATGTAGGTAATAACTGAAAATACTCCTAACTATAAAGCTGCTGGGAAAATGCTTGAAGAAAGGAGAAGGAATTTGTTCTGGACACCTTGTGCTATCTACTGTATTAATCAAGTGCTTGAAGATTTTCTGAAGATTAGATGTGTAGAAGAGTGCATGGAAAAGGGCCAGAAAATTACAAAACTAATATACAATCAAATATGGTTGTTAAATCTTATGAAAAGTGAATTTACCCATGGGAATGAGCTTCTAAAGCCAGCTGGCACCCAGTGTGCTTCTAGCTTTGCTACATTGCAGAATTTGTTGGATCATCGAGTTAGTCTCAGAAGAATGTTTCTTTCAAACAAATGGATGTCATCCAGGTTCTCCAGTTCAAGCCAGGGGAAAGAGGTGCAAAAAATTGTTTTGAATGTCACATTTTGGAAGAAAATGCAGTATGTGAGGAATTCAGTATATCCCATATTGCAAGTGTTTCAAAAGGTGTCTAGTGGTGAGAGCTTGTCAATGCCATATGTATATAACGACTTGTACAGGGCAAAACTTGCAATCAAATCTATTCATGGCGATGATGCACGGAAATATGAGCCATTCTGGAAGGTGATAGACAGGCACTGTAACTCTCTTTTTTGTCATCCTCTTTACTTGGCTGCTTACTTCTTGAATCCGTCATACCGATATCGTCAAGATTTTGTTTCGGTATGCCAGAATAATATTTTTCTAATGGTTGTGAATTTTCTAATTTTATTCAAGTTCTCTTCTGAAGTGAATGTTTGATATGACTGTAGCATTCTGATGTAGTACGTGGTCTGAATGAATGCATTGTTCGGCTAGAACTAGATAATATGAGACGAATATCTGCATCAATGCAAGTAAGATATCCTTAATGACTGCTATATGATATACTTTATTAAATATTTTCTAATTATTATATCTTATTCACAATGATGTTATTTCTAGATTCCTCATTATAATTCAGCTCAAGATGACTTTGGAACTGAATTGGCAATTAGCACAAGAACAGGTCTTGAACCAGGTAAATTACTGCATTAGATGCTTCATGCAACAATTAAATATGCGGAGGTGTGTTGCTAATTCTATGAGTTGATTAATTAATTTACCCTTTTTACCTCACTAGCTGCTTGGTGGCAACAACATGGAATAAGTTGCTTGGAGTTGCAAAGAATAGCCGTTCGCATATTAAGTCAGACATGCTCATCTTTTGCATGTGAGCATGATGGGAGCATGTATGATCAGATATATAGCAAAAGAAAAAATCGCCTATCACAGAAGAAAGTTAATGACATTATGTACGTTCACTACAACTTGCGACTTAGAGAATGCCAAGTAAGAAAAAGGTCTAGGGAGTCGAAGTCAACCTCTGCTGAGAATGTTCTACAAGAGCACTTACTTGCTGACTGGATAGTTGATACCACTGCACAAAGCTCTGATGGTGACAAGGTAATCAGCGCTTAGCAATAATTGCTGTTAATTGGATTCCTGATACATTTATAGTTGTCTTGGCGATTGTTAATTTATATTTATATGTTTCCATGCACTATATATGTTTTATAAATAAAGGTAATCGAAATCAGACCTGATATTAAATCAGGATAGTCATCGTTTCAAAGTTTAATGGTCTGACCAGGGTTGAACCGGTAATAATTAAATAATATAAGGAGAATGCTAAACAGTCCAGGGGCATTGGTTATGCACCAAAAGAAGTAAGTTTTTATTAAAAAGTAATGTAATTATTACTTGATGAAAAGTGCAGTTTATATTTCCAAGACAGAAATTCTATTTTTGGATTTCTTAACGAGTGCCTCGGGGGCACCGGTTAGCAAGACTCTATTTTTTTTATTGACTTTTAGAATCTTATACCAAACAAAATACAAGTGTAATGAAAAAAAGGAGGGTTTTAAAAAAGAGACAACTAGTAAAGAACTTTCTTCTATAAAACTCCTGAGGGTCTTCGAGACTGGAAACAGATCCGGTTTCCGGCCCAACTTGTCAAACTGGCCCTTTTGGTTTTGATTACCTTGGACTTTTGTACAATATAGTAATTTATCTGTAATAGTTCTTGATTCAATCACTTGATTTTGAAGAATTCAAAAGTCGAACTCAATTTGGTCATAGATTGTTTTTTTTATTATATGTTGAAACTATTGGCATCACTTGCATGCGACTTTCAGTTACATGTTATATTTTGCATTGTTACATGCAACATAAGTTGGGTATTACTGTGTTTAAGATACTTATCGATATCCCCTTAAAAAATGAAAAAGATAATTCACCATATGTTTGTCAGCAGCGAAGCACCAACAATGTGGATATCTGATTGAATCTTCCTTTTGTTTTTGTAGAATATCCCTTTTGGTGTTGATCTAGATGACTATGAATATGAAAATGATTCAATAGACTATGATGATGGATCTGAAAGGCATCTAAAGGGTTCCCATGAGCTGGTTACTATGGCTGATGGAGCAGTAGGATCTTCAGATGCAGATCATGCTAACATTGATGGTGCCAGTGACGATGAGTCGGATCTGAATTATTTTGATGATGATATGAGTGAGTAA
Protein sequence

>MS.gene062059.t1

MAPIRSTGFVDPGWDHGIAQDERKKKVRCNYCGKVVSGGIYRLKQHLARVSGEVTYCEKAPEEVYLKMKENLEGCRSNKKQKQVDAQAYMNFQSNDDEDDEEQVGCRSKGKQLMDGRNVSVNLTPLRSLGYVDPGWEHGVAQDERKKKVKCSYCEKVVSGGINRFKQHLARIPGEVAPCKSAPEEVYLKIKENMKWHRTGKRHRQPEGKDLMPFYPKSDNEDDEYEQQEDTLHHMNKEALIDNDRRYCKDTGKTFKGMSSNTSPEPALRRSRLDSFYLKHPTNQNLQTCKQLKVKTGPTKKLRKELFSSICKFFCHAGIPLQAADSVYFHKMLELAGQYGQGLACPSSQLISGRFLQEEINSIKNYLAEYKASWAITGCSIMADSWRDAQGRTIINFLVSSPHGVYFVSSVDATNVVEDATYLFKLLDKVVEEIGEENVVQVITENTPNYKAAGKMLEERRRNLFWTPCAIYCINQVLEDFLKIRCVEECMEKGQKITKLIYNQIWLLNLMKSEFTHGNELLKPAGTQCASSFATLQNLLDHRVSLRRMFLSNKWMSSRFSSSSQGKEVQKIVLNVTFWKKMQYVRNSVYPILQVFQKVSSGESLSMPYVYNDLYRAKLAIKSIHGDDARKYEPFWKVIDRHCNSLFCHPLYLAAYFLNPSYRYRQDFVSHSDVVRGLNECIVRLELDNMRRISASMQIPHYNSAQDDFGTELAISTRTGLEPAAWWQQHGISCLELQRIAVRILSQTCSSFACEHDGSMYDQIYSKRKNRLSQKKVNDIMYVHYNLRLRECQVRKRSRESKSTSAENVLQEHLLADWIVDTTAQSSDGDKNIPFGVDLDDYEYENDSIDYDDGSERHLKGSHELVTMADGAVGSSDADHANIDGASDDESDLNYFDDDMSE