Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06225.t1 | XP_003602802.1 | 98 | 564 | 11 | 0 | 1 | 564 | 1 | 564 | 3.30E-299 | 1036.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06225.t1 | F4I9E1 | 22.7 | 555 | 400 | 8 | 15 | 564 | 43 | 573 | 8.1e-28 | 126.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06225.t1 | G7J3V8 | 98.0 | 564 | 11 | 0 | 1 | 564 | 1 | 564 | 2.4e-299 | 1036.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055501 | MS.gene06225 | 0.959122 | 4.28E-117 | -1.69E-46 |
| MS.gene05625 | MS.gene06225 | 0.812332 | 4.47E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06225.t1 | MTR_3g099150 | 98.759 | 564 | 7 | 0 | 1 | 564 | 1 | 564 | 0.0 | 1130 |
| MS.gene06225.t1 | MTR_7g029015 | 50.588 | 595 | 245 | 6 | 1 | 559 | 1 | 582 | 0.0 | 555 |
| MS.gene06225.t1 | MTR_1g111510 | 35.053 | 562 | 323 | 10 | 10 | 554 | 21 | 557 | 7.73e-101 | 317 |
| MS.gene06225.t1 | MTR_2g450710 | 33.039 | 566 | 341 | 6 | 16 | 561 | 13 | 560 | 2.98e-99 | 312 |
| MS.gene06225.t1 | MTR_1g111540 | 34.043 | 564 | 326 | 10 | 10 | 554 | 21 | 557 | 3.19e-99 | 313 |
| MS.gene06225.t1 | MTR_1g111530 | 34.458 | 563 | 315 | 10 | 15 | 554 | 22 | 553 | 1.68e-98 | 311 |
| MS.gene06225.t1 | MTR_5g022380 | 35.484 | 558 | 312 | 11 | 9 | 557 | 7 | 525 | 8.69e-98 | 307 |
| MS.gene06225.t1 | MTR_1g111550 | 34.116 | 554 | 328 | 10 | 15 | 554 | 25 | 555 | 3.38e-96 | 305 |
| MS.gene06225.t1 | MTR_4g116210 | 32.302 | 582 | 349 | 7 | 7 | 561 | 3 | 566 | 1.04e-94 | 301 |
| MS.gene06225.t1 | MTR_4g073690 | 34.608 | 549 | 327 | 7 | 15 | 557 | 15 | 537 | 1.07e-94 | 300 |
| MS.gene06225.t1 | MTR_7g102880 | 34.775 | 555 | 333 | 8 | 15 | 554 | 29 | 569 | 1.66e-93 | 299 |
| MS.gene06225.t1 | MTR_1g050550 | 33.692 | 558 | 335 | 9 | 15 | 554 | 24 | 564 | 1.97e-90 | 290 |
| MS.gene06225.t1 | MTR_1g059080 | 32.162 | 569 | 342 | 10 | 6 | 554 | 11 | 555 | 2.08e-85 | 276 |
| MS.gene06225.t1 | MTR_2g100400 | 31.810 | 569 | 323 | 11 | 10 | 554 | 2 | 529 | 6.36e-81 | 263 |
| MS.gene06225.t1 | MTR_5g090570 | 32.188 | 553 | 327 | 10 | 15 | 556 | 11 | 526 | 6.92e-74 | 245 |
| MS.gene06225.t1 | MTR_4g073690 | 36.031 | 383 | 237 | 4 | 15 | 392 | 15 | 394 | 1.54e-69 | 229 |
| MS.gene06225.t1 | MTR_5g022380 | 34.361 | 454 | 250 | 11 | 113 | 557 | 1 | 415 | 6.22e-65 | 218 |
| MS.gene06225.t1 | MTR_7g083660 | 25.480 | 573 | 370 | 11 | 13 | 554 | 5 | 551 | 1.69e-38 | 149 |
| MS.gene06225.t1 | MTR_2g104250 | 25.937 | 347 | 187 | 5 | 231 | 561 | 4 | 296 | 1.59e-33 | 130 |
| MS.gene06225.t1 | MTR_5g026350 | 23.850 | 587 | 368 | 16 | 14 | 554 | 6 | 559 | 1.88e-29 | 123 |
| MS.gene06225.t1 | MTR_3g466040 | 23.949 | 547 | 369 | 10 | 15 | 554 | 7 | 513 | 2.13e-28 | 119 |
| MS.gene06225.t1 | MTR_3g466110 | 23.789 | 475 | 339 | 7 | 15 | 481 | 7 | 466 | 1.00e-25 | 111 |
| MS.gene06225.t1 | MTR_8g071920 | 28.144 | 167 | 118 | 2 | 14 | 180 | 47 | 211 | 3.09e-15 | 79.3 |
| MS.gene06225.t1 | MTR_8g071920 | 26.482 | 253 | 155 | 7 | 311 | 556 | 374 | 602 | 1.20e-12 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06225.t1 | AT5G50520 | 50.269 | 557 | 245 | 8 | 5 | 557 | 6 | 534 | 0.0 | 553 |
| MS.gene06225.t1 | AT5G50630 | 50.269 | 557 | 245 | 8 | 5 | 557 | 6 | 534 | 0.0 | 553 |
| MS.gene06225.t1 | AT3G01930 | 50.166 | 604 | 234 | 8 | 3 | 562 | 4 | 584 | 0.0 | 545 |
| MS.gene06225.t1 | AT5G14120 | 48.074 | 597 | 252 | 6 | 3 | 562 | 4 | 579 | 0.0 | 531 |
| MS.gene06225.t1 | AT3G01930 | 51.481 | 439 | 163 | 6 | 3 | 398 | 4 | 435 | 2.88e-135 | 400 |
| MS.gene06225.t1 | AT3G01930 | 47.571 | 494 | 192 | 8 | 113 | 562 | 1 | 471 | 3.90e-135 | 401 |
| MS.gene06225.t1 | AT2G39210 | 36.268 | 568 | 309 | 11 | 15 | 557 | 21 | 560 | 4.04e-105 | 328 |
| MS.gene06225.t1 | AT2G28120 | 34.955 | 555 | 330 | 9 | 11 | 554 | 13 | 547 | 3.50e-99 | 312 |
| MS.gene06225.t1 | AT4G34950 | 33.795 | 577 | 320 | 13 | 15 | 562 | 16 | 559 | 1.57e-97 | 308 |
| MS.gene06225.t1 | AT1G80530 | 32.297 | 579 | 338 | 7 | 7 | 561 | 3 | 551 | 8.71e-92 | 293 |
| MS.gene06225.t1 | AT2G16660 | 33.979 | 568 | 322 | 11 | 5 | 557 | 4 | 533 | 3.12e-90 | 288 |
| MS.gene06225.t1 | AT1G74780 | 32.389 | 565 | 313 | 12 | 15 | 556 | 7 | 525 | 7.79e-80 | 261 |
| MS.gene06225.t1 | AT2G34350 | 30.688 | 567 | 323 | 9 | 10 | 556 | 2 | 518 | 2.10e-79 | 259 |
| MS.gene06225.t1 | AT2G34350 | 30.688 | 567 | 323 | 9 | 10 | 556 | 2 | 518 | 2.10e-79 | 259 |
| MS.gene06225.t1 | AT1G18940 | 30.961 | 562 | 318 | 12 | 15 | 557 | 9 | 519 | 1.14e-73 | 244 |
| MS.gene06225.t1 | AT2G34355 | 29.329 | 566 | 326 | 13 | 12 | 556 | 4 | 516 | 3.03e-71 | 238 |
| MS.gene06225.t1 | AT2G16660 | 34.739 | 403 | 234 | 7 | 4 | 392 | 3 | 390 | 5.35e-65 | 217 |
| MS.gene06225.t1 | AT2G34355 | 28.947 | 418 | 231 | 12 | 152 | 556 | 2 | 366 | 3.30e-41 | 153 |
| MS.gene06225.t1 | AT4G19450 | 27.148 | 582 | 358 | 17 | 14 | 556 | 6 | 560 | 4.14e-40 | 154 |
| MS.gene06225.t1 | AT5G45275 | 24.788 | 589 | 359 | 14 | 14 | 555 | 6 | 557 | 1.68e-34 | 137 |
| MS.gene06225.t1 | AT3G01630 | 24.645 | 564 | 371 | 14 | 14 | 559 | 22 | 549 | 7.26e-33 | 132 |
| MS.gene06225.t1 | AT3G01630 | 24.645 | 564 | 371 | 14 | 14 | 559 | 40 | 567 | 8.81e-33 | 132 |
| MS.gene06225.t1 | AT4G19450 | 27.228 | 404 | 253 | 12 | 14 | 381 | 6 | 404 | 1.06e-32 | 130 |
| MS.gene06225.t1 | AT1G31470 | 24.561 | 570 | 373 | 17 | 14 | 564 | 42 | 573 | 5.68e-32 | 130 |
| MS.gene06225.t1 | AT2G30300 | 24.390 | 574 | 317 | 14 | 16 | 555 | 8 | 498 | 3.46e-26 | 112 |
Find 132 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTTCCTTCTTTGCCTTTA+TGG | 0.127424 | 3.1:+79037066 | MS.gene06225:CDS |
| GCAGCAACTTCAGAAGTATT+TGG | 0.160612 | 3.1:+79038977 | MS.gene06225:CDS |
| CTTAAGTGTGGCTAAGGATT+TGG | 0.185948 | 3.1:+79036920 | MS.gene06225:CDS |
| GTTGGATCTCTGCTTGTATC+TGG | 0.224970 | 3.1:+79039049 | MS.gene06225:CDS |
| AAGCAACTCGTTATTATTTC+CGG | 0.233736 | 3.1:-79039173 | None:intergenic |
| ATGCACAGAATACAAATTTA+TGG | 0.236670 | 3.1:+79039115 | MS.gene06225:CDS |
| ACCAACACGGCCTAGGAAAT+TGG | 0.240141 | 3.1:-79038441 | None:intergenic |
| GTGTTTGTTTCTATCGTCTT+AGG | 0.246398 | 3.1:+79038320 | MS.gene06225:CDS |
| GGGTCAGATTTGTCAATCTT+TGG | 0.262023 | 3.1:+79038376 | MS.gene06225:CDS |
| CTTCAGAATGTTGTTGGTTA+TGG | 0.262768 | 3.1:+79037017 | MS.gene06225:CDS |
| TTATGGAGCCTCCGCGAAAT+TGG | 0.264431 | 3.1:+79039132 | MS.gene06225:CDS |
| TTGGCTTAAGCGGCGCAATT+TGG | 0.265189 | 3.1:+79037778 | MS.gene06225:CDS |
| TTCATCTTGGTGGGACAAAA+TGG | 0.273357 | 3.1:+79037663 | MS.gene06225:CDS |
| AATTATAGTTCCTATTATAT+TGG | 0.276451 | 3.1:+79038088 | MS.gene06225:CDS |
| CTCTTAGCTGCCTATTTAAT+GGG | 0.282295 | 3.1:+79037978 | MS.gene06225:CDS |
| TTATTTCCGGTACCATAATA+AGG | 0.284663 | 3.1:-79039160 | None:intergenic |
| AATATAATAGGAACTATAAT+TGG | 0.296483 | 3.1:-79038086 | None:intergenic |
| CAACAAAACTCCCATTAAAT+AGG | 0.301844 | 3.1:-79037988 | None:intergenic |
| TCAGCAAAGCTTGGCCTGTT+TGG | 0.301872 | 3.1:+79036973 | MS.gene06225:CDS |
| AAATTGGCAATGCCTTATTA+TGG | 0.304344 | 3.1:+79039148 | MS.gene06225:CDS |
| TCTCTTAGCTGCCTATTTAA+TGG | 0.306613 | 3.1:+79037977 | MS.gene06225:CDS |
| GAGAAGAAAACCAATATAAT+AGG | 0.316323 | 3.1:-79038098 | None:intergenic |
| ATAGCAATAACCATGGGTTT+TGG | 0.320887 | 3.1:+79038926 | MS.gene06225:CDS |
| TTAAGTGTGGCTAAGGATTT+GGG | 0.328079 | 3.1:+79036921 | MS.gene06225:CDS |
| CAGCAAAGCTTGGCCTGTTT+GGG | 0.333110 | 3.1:+79036974 | MS.gene06225:CDS |
| CAGCAACTTCAGAAGTATTT+GGG | 0.333578 | 3.1:+79038978 | MS.gene06225:CDS |
| ATTCCCAACTTTATGGTAAT+GGG | 0.335479 | 3.1:+79039305 | MS.gene06225:CDS |
| GCTAGAGAATATGTTTGATT+TGG | 0.340300 | 3.1:+79038010 | MS.gene06225:CDS |
| TATTCCCAACTTTATGGTAA+TGG | 0.342343 | 3.1:+79039304 | MS.gene06225:CDS |
| ATCTTCAAAAGTAACATGTT+TGG | 0.359540 | 3.1:-79038216 | None:intergenic |
| GGTCAGATTTGTCAATCTTT+GGG | 0.365348 | 3.1:+79038377 | MS.gene06225:CDS |
| GTTTGGGCAGTTATACTTGT+TGG | 0.387389 | 3.1:+79036990 | MS.gene06225:CDS |
| GTTTCTATCGTCTTAGGTTG+TGG | 0.394738 | 3.1:+79038326 | MS.gene06225:CDS |
| AAAATCAAAGAGGCTTGATC+AGG | 0.403361 | 3.1:-79037828 | None:intergenic |
| TATTTGGGTTAAAGAACTTT+GGG | 0.404022 | 3.1:+79038993 | MS.gene06225:CDS |
| GCAGGAACAGCTTACATGTT+TGG | 0.404543 | 3.1:+79036840 | MS.gene06225:CDS |
| ATCGTCTTAGGTTGTGGATC+AGG | 0.406553 | 3.1:+79038332 | MS.gene06225:CDS |
| GTAGTTTGCTTGGTTGCAGC+TGG | 0.409953 | 3.1:+79039244 | MS.gene06225:CDS |
| TCTAGACCCTCTGATGAATC+AGG | 0.413206 | 3.1:+79037927 | MS.gene06225:CDS |
| ATTTACCATTGCTTGTGTTA+AGG | 0.413356 | 3.1:-79038282 | None:intergenic |
| TTGTTGGTTATGGTCTTGTT+TGG | 0.418799 | 3.1:+79037027 | MS.gene06225:CDS |
| CACACACATACCGTCCATAA+AGG | 0.418890 | 3.1:-79037080 | None:intergenic |
| TACTATACCATAGGTTTGGT+TGG | 0.429856 | 3.1:+79038890 | MS.gene06225:CDS |
| GACAACGTTGGACTTCTAGC+TGG | 0.436727 | 3.1:+79036945 | MS.gene06225:CDS |
| AGCTTTCTTAAGTGTGGCTA+AGG | 0.438962 | 3.1:+79036914 | MS.gene06225:CDS |
| GTATTTGGGTTAAAGAACTT+TGG | 0.439987 | 3.1:+79038992 | MS.gene06225:CDS |
| AAAGTTAAAGAAACCATTGC+TGG | 0.440366 | 3.1:-79037867 | None:intergenic |
| GGTGTTTGTGTGTGCAATGT+GGG | 0.443279 | 3.1:+79036806 | MS.gene06225:CDS |
| CTCCTACTATACCATAGGTT+TGG | 0.445658 | 3.1:+79038886 | MS.gene06225:CDS |
| ACTTCCCATTACCATAAAGT+TGG | 0.446345 | 3.1:-79039309 | None:intergenic |
| TCCTTCTTTGCCTTTATGGA+CGG | 0.447825 | 3.1:+79037070 | MS.gene06225:CDS |
| ATTGCCAACGCCACAAGTCT+CGG | 0.458481 | 3.1:-79038836 | None:intergenic |
| AGAAAAGTTGAAGAAATTTG+TGG | 0.464182 | 3.1:+79036770 | MS.gene06225:CDS |
| CTTCCCATTACCATAAAGTT+GGG | 0.464254 | 3.1:-79039308 | None:intergenic |
| GGTGTCCTTCAGAATGTTGT+TGG | 0.468337 | 3.1:+79037011 | MS.gene06225:CDS |
| ATGTGGGATATGTCATTTGC+AGG | 0.471152 | 3.1:+79036822 | MS.gene06225:CDS |
| ATATCCCTACCACGGGGCCT+CGG | 0.474408 | 3.1:-79037743 | None:intergenic |
| ATCTCTGCTTGTATCTGGAT+TGG | 0.476420 | 3.1:+79039054 | MS.gene06225:CDS |
| CTTACAATTGCTAGCCCAGT+TGG | 0.478016 | 3.1:+79039031 | MS.gene06225:CDS |
| CAATGTTAACATTTATGTAT+CGG | 0.479065 | 3.1:+79038406 | MS.gene06225:CDS |
| TTCCTAGGCCGTGTTGGTGG+CGG | 0.479191 | 3.1:+79038446 | MS.gene06225:CDS |
| ACAAGTATAACTGCCCAAAC+AGG | 0.483574 | 3.1:-79036987 | None:intergenic |
| ATTTGTTATTCCTTGACTTG+TGG | 0.484082 | 3.1:+79039211 | MS.gene06225:CDS |
| GAAAACCGAGGCCCCGTGGT+AGG | 0.484749 | 3.1:+79037738 | MS.gene06225:CDS |
| GAAAAGTTGAAGAAATTTGT+GGG | 0.485863 | 3.1:+79036771 | MS.gene06225:CDS |
| GATTGATTAAAAGTATGAAC+AGG | 0.486679 | 3.1:-79037906 | None:intergenic |
| TGCTAATGCAATTGACCAAT+GGG | 0.487067 | 3.1:-79038957 | None:intergenic |
| AAAGGATTCGTTGGCTTAAG+CGG | 0.491176 | 3.1:+79037768 | MS.gene06225:CDS |
| GCAATGCCTTATTATGGTAC+CGG | 0.495270 | 3.1:+79039154 | MS.gene06225:CDS |
| TCATTGTTCAAAGGACTAAG+AGG | 0.496212 | 3.1:+79039278 | MS.gene06225:CDS |
| ATTCAAGCAGTGATGTCCTT+GGG | 0.509232 | 3.1:+79038860 | MS.gene06225:CDS |
| TCCAATTTCCTAGGCCGTGT+TGG | 0.509421 | 3.1:+79038440 | MS.gene06225:CDS |
| GATACAAGCAGAGATCCAAC+TGG | 0.510888 | 3.1:-79039046 | None:intergenic |
| GATTCAAGCAGTGATGTCCT+TGG | 0.514626 | 3.1:+79038859 | MS.gene06225:CDS |
| GGGATATTGAAAGGATTCGT+TGG | 0.515288 | 3.1:+79037759 | MS.gene06225:CDS |
| ATACTACAACACAGCAGCAT+TGG | 0.515438 | 3.1:+79037692 | MS.gene06225:CDS |
| ACCGTCCATAAAGGCAAAGA+AGG | 0.516260 | 3.1:-79037071 | None:intergenic |
| ACAACGTTGGACTTCTAGCT+GGG | 0.518106 | 3.1:+79036946 | MS.gene06225:CDS |
| AACTTGTCCAACCAAACCTA+TGG | 0.519795 | 3.1:-79038897 | None:intergenic |
| TGAGTTTGATCATTGTTCAA+AGG | 0.522810 | 3.1:+79039269 | MS.gene06225:CDS |
| CTGGGTTTATCAGCAAAGCT+TGG | 0.525007 | 3.1:+79036964 | MS.gene06225:CDS |
| TTGCCAACGCCACAAGTCTC+GGG | 0.527950 | 3.1:-79038835 | None:intergenic |
| AACGAGTTGCTTCTTTGCGA+AGG | 0.528487 | 3.1:+79039184 | MS.gene06225:CDS |
| ATCAGCATATCCAATTTCCT+AGG | 0.530608 | 3.1:+79038431 | MS.gene06225:CDS |
| AGGTGTAGTTGCTGCAACAA+TGG | 0.531721 | 3.1:-79038162 | None:intergenic |
| TGCTAAAATTCCACAAGTCA+AGG | 0.533451 | 3.1:-79039221 | None:intergenic |
| AACCAAACCTATGGTATAGT+AGG | 0.541846 | 3.1:-79038888 | None:intergenic |
| CCTTTCAATATCCCTACCAC+GGG | 0.542176 | 3.1:-79037750 | None:intergenic |
| CCCATGCTGCTCTTTATGAC+TGG | 0.544672 | 3.1:-79036873 | None:intergenic |
| GGACTCTCCTACTATACCAT+AGG | 0.548639 | 3.1:+79038881 | MS.gene06225:CDS |
| TGGTGTTTGTGTGTGCAATG+TGG | 0.552532 | 3.1:+79036805 | MS.gene06225:CDS |
| AATTTCCTAGGCCGTGTTGG+TGG | 0.553242 | 3.1:+79038443 | MS.gene06225:CDS |
| AGAAATTTGTGGGACACAGA+TGG | 0.556960 | 3.1:+79036781 | MS.gene06225:CDS |
| ATAAGGCATTGCCAATTTCG+CGG | 0.557317 | 3.1:-79039143 | None:intergenic |
| AAAACCGAGGCCCCGTGGTA+GGG | 0.558213 | 3.1:+79037739 | MS.gene06225:CDS |
| GTAAAATCCTCTCCTCTATG+TGG | 0.564577 | 3.1:-79038260 | None:intergenic |
| CCAGTCATAAAGAGCAGCAT+GGG | 0.570468 | 3.1:+79036873 | MS.gene06225:CDS |
| CATAGCAGTTGGTCCAGCAA+TGG | 0.571113 | 3.1:+79037854 | MS.gene06225:CDS |
| CTGCTAATGCAATTGACCAA+TGG | 0.572591 | 3.1:-79038958 | None:intergenic |
| ATACCCGAGACTTGTGGCGT+TGG | 0.574402 | 3.1:+79038832 | MS.gene06225:CDS |
| ATGAATCCTGATTCATCAGA+GGG | 0.575878 | 3.1:-79037933 | None:intergenic |
| GCAAGTAGCTTTCTTAAGTG+TGG | 0.579267 | 3.1:+79036908 | MS.gene06225:CDS |
| AGCCGCCACCAACACGGCCT+AGG | 0.579659 | 3.1:-79038448 | None:intergenic |
| TGCTATGATGAAAATCAAAG+AGG | 0.588102 | 3.1:-79037838 | None:intergenic |
| TTCTGGGAAACTTTGCACAC+AGG | 0.588869 | 3.1:-79037718 | None:intergenic |
| GAAATTTGTGGGACACAGAT+GGG | 0.596755 | 3.1:+79036782 | MS.gene06225:CDS |
| TTTGGCTTGTTGTAACACAC+AGG | 0.597277 | 3.1:+79037045 | MS.gene06225:CDS |
| TCACTAATCTCATTGTGCAT+AGG | 0.602939 | 3.1:-79038182 | None:intergenic |
| TCCTTTCAATATCCCTACCA+CGG | 0.603422 | 3.1:-79037751 | None:intergenic |
| ACCAGTCATAAAGAGCAGCA+TGG | 0.605771 | 3.1:+79036872 | MS.gene06225:CDS |
| AAGGATTTGGGTGACAACGT+TGG | 0.607484 | 3.1:+79036933 | MS.gene06225:CDS |
| AAATCAAAGAGGCTTGATCA+GGG | 0.611738 | 3.1:-79037827 | None:intergenic |
| ATTTGGATACCCGAGACTTG+TGG | 0.615622 | 3.1:+79038826 | MS.gene06225:CDS |
| TATGTGATAGCAATAACCAT+GGG | 0.616249 | 3.1:+79038920 | MS.gene06225:CDS |
| CATAACCAACAACATTCTGA+AGG | 0.619633 | 3.1:-79037016 | None:intergenic |
| CATGAATCCTGATTCATCAG+AGG | 0.621943 | 3.1:-79037934 | None:intergenic |
| CCCGTGGTAGGGATATTGAA+AGG | 0.631908 | 3.1:+79037750 | MS.gene06225:CDS |
| GTAGTTGCTGCAACAATGGA+TGG | 0.634037 | 3.1:-79038158 | None:intergenic |
| AGAAGTAGCCGCCACCAACA+CGG | 0.636827 | 3.1:-79038454 | None:intergenic |
| TTATGTGATAGCAATAACCA+TGG | 0.640331 | 3.1:+79038919 | MS.gene06225:CDS |
| GGATCCATATCCAAAACCCA+TGG | 0.641880 | 3.1:-79038936 | None:intergenic |
| AAATGCTCCACATAGAGGAG+AGG | 0.647420 | 3.1:+79038253 | MS.gene06225:CDS |
| CCCAGAAAACCGAGGCCCCG+TGG | 0.651101 | 3.1:+79037734 | MS.gene06225:CDS |
| ATTGACAATGATAAACAACA+TGG | 0.655646 | 3.1:+79038355 | MS.gene06225:CDS |
| ACTTCTCTGAAGTTATAGTG+AGG | 0.664718 | 3.1:+79038471 | MS.gene06225:CDS |
| CAAAGTTTCCCAGAAAACCG+AGG | 0.688148 | 3.1:+79037726 | MS.gene06225:CDS |
| TTGACAATGATAAACAACAT+GGG | 0.694598 | 3.1:+79038356 | MS.gene06225:CDS |
| AGGCATTGCCAATTTCGCGG+AGG | 0.700363 | 3.1:-79039140 | None:intergenic |
| ATACAAGCAGAGATCCAACT+GGG | 0.706369 | 3.1:-79039045 | None:intergenic |
| GGTATAGTAGGAGAGTCCCA+AGG | 0.710600 | 3.1:-79038876 | None:intergenic |
| ATTTGTGGGACACAGATGGG+TGG | 0.741545 | 3.1:+79036785 | MS.gene06225:CDS |
| CTTTCAATATCCCTACCACG+GGG | 0.783983 | 3.1:-79037749 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAACAATTTATATTACA+CGG | + | chr3.1:79037578-79037597 | MS.gene06225:intron | 10.0% |
| !! | TTATAAAAAAACTTAAATGT+CGG | - | chr3.1:79038665-79038684 | None:intergenic | 10.0% |
| !! | AATATAATAGGAACTATAAT+TGG | - | chr3.1:79038089-79038108 | None:intergenic | 15.0% |
| !! | AATTATAGTTCCTATTATAT+TGG | + | chr3.1:79038088-79038107 | MS.gene06225:CDS | 15.0% |
| !! | TATGAAATGAAAATAATACA+TGG | - | chr3.1:79037559-79037578 | None:intergenic | 15.0% |
| !!! | AAAAGTATAAAACCATAATT+TGG | - | chr3.1:79037395-79037414 | None:intergenic | 15.0% |
| !!! | ATGTTTTGATACTTTTTTTT+GGG | + | chr3.1:79037367-79037386 | MS.gene06225:intron | 15.0% |
| !!! | TATGTTTTGATACTTTTTTT+TGG | + | chr3.1:79037366-79037385 | MS.gene06225:intron | 15.0% |
| !!! | TGGTTTTATACTTTTTTTTA+AGG | + | chr3.1:79037400-79037419 | MS.gene06225:intron | 15.0% |
| !! | CAATGTTAACATTTATGTAT+CGG | + | chr3.1:79038406-79038425 | MS.gene06225:CDS | 20.0% |
| !! | TCTCAAAATAGAATAAAGAA+GGG | - | chr3.1:79038525-79038544 | None:intergenic | 20.0% |
| !!! | AATTTTCTGTTCAAAAAATC+CGG | - | chr3.1:79038809-79038828 | None:intergenic | 20.0% |
| !!! | GATTTTTTGAACAGAAAATT+TGG | + | chr3.1:79038809-79038828 | MS.gene06225:intron | 20.0% |
| !!! | TCAATATTTGAAGATTTTGA+AGG | - | chr3.1:79038612-79038631 | None:intergenic | 20.0% |
| !!! | TGTTTTGATACTTTTTTTTG+GGG | + | chr3.1:79037368-79037387 | MS.gene06225:intron | 20.0% |
| ! | AGAAAAGTTGAAGAAATTTG+TGG | + | chr3.1:79036770-79036789 | MS.gene06225:CDS | 25.0% |
| ! | ATAGCATTGTAGAATCAAAA+GGG | - | chr3.1:79038764-79038783 | None:intergenic | 25.0% |
| ! | ATCTTCAAAAGTAACATGTT+TGG | - | chr3.1:79038219-79038238 | None:intergenic | 25.0% |
| ! | ATGCACAGAATACAAATTTA+TGG | + | chr3.1:79039115-79039134 | MS.gene06225:CDS | 25.0% |
| ! | ATTGACAATGATAAACAACA+TGG | + | chr3.1:79038355-79038374 | MS.gene06225:CDS | 25.0% |
| ! | CATTTCTCAAGTACAAAATA+AGG | + | chr3.1:79038696-79038715 | MS.gene06225:intron | 25.0% |
| ! | GAAAAGTTGAAGAAATTTGT+GGG | + | chr3.1:79036771-79036790 | MS.gene06225:CDS | 25.0% |
| ! | GAAATGAAAATAATACATGG+TGG | - | chr3.1:79037556-79037575 | None:intergenic | 25.0% |
| ! | GAGAAGAAAACCAATATAAT+AGG | - | chr3.1:79038101-79038120 | None:intergenic | 25.0% |
| ! | GTAAGTAACTAATCTAGTTA+TGG | - | chr3.1:79037319-79037338 | None:intergenic | 25.0% |
| ! | GTCTCAAAATAGAATAAAGA+AGG | - | chr3.1:79038526-79038545 | None:intergenic | 25.0% |
| ! | TTGACAATGATAAACAACAT+GGG | + | chr3.1:79038356-79038375 | MS.gene06225:CDS | 25.0% |
| !! | GATTGATTAAAAGTATGAAC+AGG | - | chr3.1:79037909-79037928 | None:intergenic | 25.0% |
| !! | TATTTGGGTTAAAGAACTTT+GGG | + | chr3.1:79038993-79039012 | MS.gene06225:CDS | 25.0% |
| !! | TTTGTAACAATTTGAGTTTG+AGG | + | chr3.1:79038733-79038752 | MS.gene06225:intron | 25.0% |
| !!! | AGTATCAGAGATCTTTTTTT+TGG | - | chr3.1:79038548-79038567 | None:intergenic | 25.0% |
| AAAGTTAAAGAAACCATTGC+TGG | - | chr3.1:79037870-79037889 | None:intergenic | 30.0% | |
| AAGCAACTCGTTATTATTTC+CGG | - | chr3.1:79039176-79039195 | None:intergenic | 30.0% | |
| ATTCCCAACTTTATGGTAAT+GGG | + | chr3.1:79039305-79039324 | MS.gene06225:CDS | 30.0% | |
| ATTTACCATTGCTTGTGTTA+AGG | - | chr3.1:79038285-79038304 | None:intergenic | 30.0% | |
| CAACAAAACTCCCATTAAAT+AGG | - | chr3.1:79037991-79038010 | None:intergenic | 30.0% | |
| CATAGCATTGTAGAATCAAA+AGG | - | chr3.1:79038765-79038784 | None:intergenic | 30.0% | |
| CTTTCATATTGAATCAAGTG+TGG | + | chr3.1:79037265-79037284 | MS.gene06225:intron | 30.0% | |
| GCTAGAGAATATGTTTGATT+TGG | + | chr3.1:79038010-79038029 | MS.gene06225:CDS | 30.0% | |
| TAACTAATCTAGTTATGGTG+AGG | - | chr3.1:79037314-79037333 | None:intergenic | 30.0% | |
| TATGTGATAGCAATAACCAT+GGG | + | chr3.1:79038920-79038939 | MS.gene06225:CDS | 30.0% | |
| TATTCCCAACTTTATGGTAA+TGG | + | chr3.1:79039304-79039323 | MS.gene06225:CDS | 30.0% | |
| TGAGTTTGATCATTGTTCAA+AGG | + | chr3.1:79039269-79039288 | MS.gene06225:CDS | 30.0% | |
| TGCTATGATGAAAATCAAAG+AGG | - | chr3.1:79037841-79037860 | None:intergenic | 30.0% | |
| TTATGTGATAGCAATAACCA+TGG | + | chr3.1:79038919-79038938 | MS.gene06225:CDS | 30.0% | |
| TTATTTCCGGTACCATAATA+AGG | - | chr3.1:79039163-79039182 | None:intergenic | 30.0% | |
| ! | AAATTGGCAATGCCTTATTA+TGG | + | chr3.1:79039148-79039167 | MS.gene06225:CDS | 30.0% |
| ! | GTATTTGGGTTAAAGAACTT+TGG | + | chr3.1:79038992-79039011 | MS.gene06225:CDS | 30.0% |
| ! | TTCTACTAGATGTTGTTGTT+TGG | + | chr3.1:79037208-79037227 | MS.gene06225:intron | 30.0% |
| ! | TTGATTTTCATCATAGCAGT+TGG | + | chr3.1:79037843-79037862 | MS.gene06225:CDS | 30.0% |
| ! | TTTTACCTTAACACAAGCAA+TGG | + | chr3.1:79038277-79038296 | MS.gene06225:CDS | 30.0% |
| !! | ATTTGTTATTCCTTGACTTG+TGG | + | chr3.1:79039211-79039230 | MS.gene06225:CDS | 30.0% |
| !!! | AATTTTAGCAGTAGTTTGCT+TGG | + | chr3.1:79039234-79039253 | MS.gene06225:CDS | 30.0% |
| !!! | AGGTTTTATTCCCAACTTTA+TGG | + | chr3.1:79039298-79039317 | MS.gene06225:CDS | 30.0% |
| !!! | CAATGGTAAATGCTGATTTT+TGG | + | chr3.1:79038294-79038313 | MS.gene06225:CDS | 30.0% |
| !!! | CTATGTTTTTTCATCTTGGT+GGG | + | chr3.1:79037654-79037673 | MS.gene06225:CDS | 30.0% |
| !!! | TTTTTTTGGGGACCAAATTA+TGG | + | chr3.1:79037380-79037399 | MS.gene06225:intron | 30.0% |
| AAAATCAAAGAGGCTTGATC+AGG | - | chr3.1:79037831-79037850 | None:intergenic | 35.0% | |
| AAATCAAAGAGGCTTGATCA+GGG | - | chr3.1:79037830-79037849 | None:intergenic | 35.0% | |
| AACCAAACCTATGGTATAGT+AGG | - | chr3.1:79038891-79038910 | None:intergenic | 35.0% | |
| ACTTCCCATTACCATAAAGT+TGG | - | chr3.1:79039312-79039331 | None:intergenic | 35.0% | |
| AGCTGCAAATTATCAATCTC+TGG | - | chr3.1:79037636-79037655 | None:intergenic | 35.0% | |
| ATCAGCATATCCAATTTCCT+AGG | + | chr3.1:79038431-79038450 | MS.gene06225:CDS | 35.0% | |
| ATGAATCCTGATTCATCAGA+GGG | - | chr3.1:79037936-79037955 | None:intergenic | 35.0% | |
| CAAAAAAATGCTCCACATAG+AGG | + | chr3.1:79038248-79038267 | MS.gene06225:CDS | 35.0% | |
| CATAACCAACAACATTCTGA+AGG | - | chr3.1:79037019-79037038 | None:intergenic | 35.0% | |
| CTCTTAGCTGCCTATTTAAT+GGG | + | chr3.1:79037978-79037997 | MS.gene06225:CDS | 35.0% | |
| CTTCCCATTACCATAAAGTT+GGG | - | chr3.1:79039311-79039330 | None:intergenic | 35.0% | |
| GGTCAGATTTGTCAATCTTT+GGG | + | chr3.1:79038377-79038396 | MS.gene06225:CDS | 35.0% | |
| TCACTAATCTCATTGTGCAT+AGG | - | chr3.1:79038185-79038204 | None:intergenic | 35.0% | |
| TCATTGTTCAAAGGACTAAG+AGG | + | chr3.1:79039278-79039297 | MS.gene06225:CDS | 35.0% | |
| TCTAGTTATGGTGAGGAAAA+AGG | - | chr3.1:79037307-79037326 | None:intergenic | 35.0% | |
| TCTCTTAGCTGCCTATTTAA+TGG | + | chr3.1:79037977-79037996 | MS.gene06225:CDS | 35.0% | |
| TGCTAAAATTCCACAAGTCA+AGG | - | chr3.1:79039224-79039243 | None:intergenic | 35.0% | |
| TGCTAATGCAATTGACCAAT+GGG | - | chr3.1:79038960-79038979 | None:intergenic | 35.0% | |
| TTAAGTGTGGCTAAGGATTT+GGG | + | chr3.1:79036921-79036940 | MS.gene06225:CDS | 35.0% | |
| TTCAAAAAATCCGGCAAAGT+TGG | - | chr3.1:79038800-79038819 | None:intergenic | 35.0% | |
| ! | ATAGCAATAACCATGGGTTT+TGG | + | chr3.1:79038926-79038945 | MS.gene06225:CDS | 35.0% |
| ! | CTTCAGAATGTTGTTGGTTA+TGG | + | chr3.1:79037017-79037036 | MS.gene06225:CDS | 35.0% |
| ! | TACTATACCATAGGTTTGGT+TGG | + | chr3.1:79038890-79038909 | MS.gene06225:CDS | 35.0% |
| !! | ACTTCTCTGAAGTTATAGTG+AGG | + | chr3.1:79038471-79038490 | MS.gene06225:CDS | 35.0% |
| !! | CAGCAACTTCAGAAGTATTT+GGG | + | chr3.1:79038978-79038997 | MS.gene06225:CDS | 35.0% |
| !! | GTGTTTGTTTCTATCGTCTT+AGG | + | chr3.1:79038320-79038339 | MS.gene06225:CDS | 35.0% |
| !! | TAAACCAAAAAGTGCTGATG+AGG | + | chr3.1:79038121-79038140 | MS.gene06225:CDS | 35.0% |
| !! | TTGTTGGTTATGGTCTTGTT+TGG | + | chr3.1:79037027-79037046 | MS.gene06225:CDS | 35.0% |
| !!! | ATAACCATGGGTTTTGGATA+TGG | + | chr3.1:79038932-79038951 | MS.gene06225:CDS | 35.0% |
| !!! | CTATGTGGAGCATTTTTTTG+CGG | - | chr3.1:79038248-79038267 | None:intergenic | 35.0% |
| !!! | GCAGCTATGTTTTTTCATCT+TGG | + | chr3.1:79037650-79037669 | MS.gene06225:intron | 35.0% |
| !!! | GCTATGTTTTTTCATCTTGG+TGG | + | chr3.1:79037653-79037672 | MS.gene06225:intron | 35.0% |
| AACTTGTCCAACCAAACCTA+TGG | - | chr3.1:79038900-79038919 | None:intergenic | 40.0% | |
| ACAAGTATAACTGCCCAAAC+AGG | - | chr3.1:79036990-79037009 | None:intergenic | 40.0% | |
| AGAAATTTGTGGGACACAGA+TGG | + | chr3.1:79036781-79036800 | MS.gene06225:CDS | 40.0% | |
| AGCTTTCTTAAGTGTGGCTA+AGG | + | chr3.1:79036914-79036933 | MS.gene06225:CDS | 40.0% | |
| ATACAAGCAGAGATCCAACT+GGG | - | chr3.1:79039048-79039067 | None:intergenic | 40.0% | |
| ATACTACAACACAGCAGCAT+TGG | + | chr3.1:79037692-79037711 | MS.gene06225:CDS | 40.0% | |
| ATCTCTGCTTGTATCTGGAT+TGG | + | chr3.1:79039054-79039073 | MS.gene06225:CDS | 40.0% | |
| ATTCAAGCAGTGATGTCCTT+GGG | + | chr3.1:79038860-79038879 | MS.gene06225:CDS | 40.0% | |
| CATGAATCCTGATTCATCAG+AGG | - | chr3.1:79037937-79037956 | None:intergenic | 40.0% | |
| CTCCTACTATACCATAGGTT+TGG | + | chr3.1:79038886-79038905 | MS.gene06225:CDS | 40.0% | |
| CTGCTAATGCAATTGACCAA+TGG | - | chr3.1:79038961-79038980 | None:intergenic | 40.0% | |
| CTTAAGTGTGGCTAAGGATT+TGG | + | chr3.1:79036920-79036939 | MS.gene06225:CDS | 40.0% | |
| GAAATTTGTGGGACACAGAT+GGG | + | chr3.1:79036782-79036801 | MS.gene06225:CDS | 40.0% | |
| GCAAGTAGCTTTCTTAAGTG+TGG | + | chr3.1:79036908-79036927 | MS.gene06225:CDS | 40.0% | |
| GGGATATTGAAAGGATTCGT+TGG | + | chr3.1:79037759-79037778 | MS.gene06225:CDS | 40.0% | |
| GGGTCAGATTTGTCAATCTT+TGG | + | chr3.1:79038376-79038395 | MS.gene06225:CDS | 40.0% | |
| GTAAAATCCTCTCCTCTATG+TGG | - | chr3.1:79038263-79038282 | None:intergenic | 40.0% | |
| GTTTGGGCAGTTATACTTGT+TGG | + | chr3.1:79036990-79037009 | MS.gene06225:CDS | 40.0% | |
| TCCTTCTTTGCCTTTATGGA+CGG | + | chr3.1:79037070-79037089 | MS.gene06225:CDS | 40.0% | |
| TCCTTTCAATATCCCTACCA+CGG | - | chr3.1:79037754-79037773 | None:intergenic | 40.0% | |
| TTCATCTTGGTGGGACAAAA+TGG | + | chr3.1:79037663-79037682 | MS.gene06225:CDS | 40.0% | |
| ! | ATGTGGGATATGTCATTTGC+AGG | + | chr3.1:79036822-79036841 | MS.gene06225:CDS | 40.0% |
| ! | GCAATGCCTTATTATGGTAC+CGG | + | chr3.1:79039154-79039173 | MS.gene06225:CDS | 40.0% |
| ! | GTTTCTATCGTCTTAGGTTG+TGG | + | chr3.1:79038326-79038345 | MS.gene06225:CDS | 40.0% |
| ! | TGTTCCTCATCAGCACTTTT+TGG | - | chr3.1:79038128-79038147 | None:intergenic | 40.0% |
| !! | AAAGGATTCGTTGGCTTAAG+CGG | + | chr3.1:79037768-79037787 | MS.gene06225:CDS | 40.0% |
| !! | ATAAGGCATTGCCAATTTCG+CGG | - | chr3.1:79039146-79039165 | None:intergenic | 40.0% |
| !! | GCAGCAACTTCAGAAGTATT+TGG | + | chr3.1:79038977-79038996 | MS.gene06225:CDS | 40.0% |
| !! | GTTTTGGATATGGATCCCAT+TGG | + | chr3.1:79038942-79038961 | MS.gene06225:CDS | 40.0% |
| !! | TTTGGCTTGTTGTAACACAC+AGG | + | chr3.1:79037045-79037064 | MS.gene06225:CDS | 40.0% |
| AAAATCCGGCAAAGTTGGAG+CGG | - | chr3.1:79038795-79038814 | None:intergenic | 45.0% | |
| AAATGCTCCACATAGAGGAG+AGG | + | chr3.1:79038253-79038272 | MS.gene06225:CDS | 45.0% | |
| AACGAGTTGCTTCTTTGCGA+AGG | + | chr3.1:79039184-79039203 | MS.gene06225:CDS | 45.0% | |
| AAGGATTTGGGTGACAACGT+TGG | + | chr3.1:79036933-79036952 | MS.gene06225:CDS | 45.0% | |
| ACCAGTCATAAAGAGCAGCA+TGG | + | chr3.1:79036872-79036891 | MS.gene06225:CDS | 45.0% | |
| ACCGTCCATAAAGGCAAAGA+AGG | - | chr3.1:79037074-79037093 | None:intergenic | 45.0% | |
| AGGTGTAGTTGCTGCAACAA+TGG | - | chr3.1:79038165-79038184 | None:intergenic | 45.0% | |
| ATTTGGATACCCGAGACTTG+TGG | + | chr3.1:79038826-79038845 | MS.gene06225:CDS | 45.0% | |
| CAAAGTTTCCCAGAAAACCG+AGG | + | chr3.1:79037726-79037745 | MS.gene06225:CDS | 45.0% | |
| CACACACATACCGTCCATAA+AGG | - | chr3.1:79037083-79037102 | None:intergenic | 45.0% | |
| CCAGTCATAAAGAGCAGCAT+GGG | + | chr3.1:79036873-79036892 | MS.gene06225:CDS | 45.0% | |
| CCTTTCAATATCCCTACCAC+GGG | - | chr3.1:79037753-79037772 | None:intergenic | 45.0% | |
| CTGGGTTTATCAGCAAAGCT+TGG | + | chr3.1:79036964-79036983 | MS.gene06225:CDS | 45.0% | |
| CTTACAATTGCTAGCCCAGT+TGG | + | chr3.1:79039031-79039050 | MS.gene06225:CDS | 45.0% | |
| CTTTCAATATCCCTACCACG+GGG | - | chr3.1:79037752-79037771 | None:intergenic | 45.0% | |
| GATACAAGCAGAGATCCAAC+TGG | - | chr3.1:79039049-79039068 | None:intergenic | 45.0% | |
| GATTCAAGCAGTGATGTCCT+TGG | + | chr3.1:79038859-79038878 | MS.gene06225:CDS | 45.0% | |
| GCAGGAACAGCTTACATGTT+TGG | + | chr3.1:79036840-79036859 | MS.gene06225:CDS | 45.0% | |
| GGACTCTCCTACTATACCAT+AGG | + | chr3.1:79038881-79038900 | MS.gene06225:CDS | 45.0% | |
| GGATCCATATCCAAAACCCA+TGG | - | chr3.1:79038939-79038958 | None:intergenic | 45.0% | |
| GGCTTCCTTCTTTGCCTTTA+TGG | + | chr3.1:79037066-79037085 | MS.gene06225:CDS | 45.0% | |
| GGTGTCCTTCAGAATGTTGT+TGG | + | chr3.1:79037011-79037030 | MS.gene06225:CDS | 45.0% | |
| GGTGTTTGTGTGTGCAATGT+GGG | + | chr3.1:79036806-79036825 | MS.gene06225:CDS | 45.0% | |
| GTAGTTGCTGCAACAATGGA+TGG | - | chr3.1:79038161-79038180 | None:intergenic | 45.0% | |
| GTTGGATCTCTGCTTGTATC+TGG | + | chr3.1:79039049-79039068 | MS.gene06225:CDS | 45.0% | |
| TCTAGACCCTCTGATGAATC+AGG | + | chr3.1:79037927-79037946 | MS.gene06225:CDS | 45.0% | |
| TGGTGTTTGTGTGTGCAATG+TGG | + | chr3.1:79036805-79036824 | MS.gene06225:CDS | 45.0% | |
| ! | ACAACGTTGGACTTCTAGCT+GGG | + | chr3.1:79036946-79036965 | MS.gene06225:CDS | 45.0% |
| ! | ATCGTCTTAGGTTGTGGATC+AGG | + | chr3.1:79038332-79038351 | MS.gene06225:CDS | 45.0% |
| ! | TTCTGGGAAACTTTGCACAC+AGG | - | chr3.1:79037721-79037740 | None:intergenic | 45.0% |
| AATTTCCTAGGCCGTGTTGG+TGG | + | chr3.1:79038443-79038462 | MS.gene06225:CDS | 50.0% | |
| ACCAACACGGCCTAGGAAAT+TGG | - | chr3.1:79038444-79038463 | None:intergenic | 50.0% | |
| ATGTTCCGCTCCAACTTTGC+CGG | + | chr3.1:79038787-79038806 | MS.gene06225:intron | 50.0% | |
| ATTGCCAACGCCACAAGTCT+CGG | - | chr3.1:79038839-79038858 | None:intergenic | 50.0% | |
| ATTTGTGGGACACAGATGGG+TGG | + | chr3.1:79036785-79036804 | MS.gene06225:CDS | 50.0% | |
| CAGCAAAGCTTGGCCTGTTT+GGG | + | chr3.1:79036974-79036993 | MS.gene06225:CDS | 50.0% | |
| CATAGCAGTTGGTCCAGCAA+TGG | + | chr3.1:79037854-79037873 | MS.gene06225:CDS | 50.0% | |
| CCCATGCTGCTCTTTATGAC+TGG | - | chr3.1:79036876-79036895 | None:intergenic | 50.0% | |
| CCCGTGGTAGGGATATTGAA+AGG | + | chr3.1:79037750-79037769 | MS.gene06225:CDS | 50.0% | |
| GACAACGTTGGACTTCTAGC+TGG | + | chr3.1:79036945-79036964 | MS.gene06225:CDS | 50.0% | |
| GGTATAGTAGGAGAGTCCCA+AGG | - | chr3.1:79038879-79038898 | None:intergenic | 50.0% | |
| TCAGCAAAGCTTGGCCTGTT+TGG | + | chr3.1:79036973-79036992 | MS.gene06225:CDS | 50.0% | |
| TCCAATTTCCTAGGCCGTGT+TGG | + | chr3.1:79038440-79038459 | MS.gene06225:CDS | 50.0% | |
| TTATGGAGCCTCCGCGAAAT+TGG | + | chr3.1:79039132-79039151 | MS.gene06225:CDS | 50.0% | |
| TTGGCTTAAGCGGCGCAATT+TGG | + | chr3.1:79037778-79037797 | MS.gene06225:CDS | 50.0% | |
| !! | GTAGTTTGCTTGGTTGCAGC+TGG | + | chr3.1:79039244-79039263 | MS.gene06225:CDS | 50.0% |
| AGAAGTAGCCGCCACCAACA+CGG | - | chr3.1:79038457-79038476 | None:intergenic | 55.0% | |
| ATACCCGAGACTTGTGGCGT+TGG | + | chr3.1:79038832-79038851 | MS.gene06225:CDS | 55.0% | |
| TTGCCAACGCCACAAGTCTC+GGG | - | chr3.1:79038838-79038857 | None:intergenic | 55.0% | |
| ! | AGGCATTGCCAATTTCGCGG+AGG | - | chr3.1:79039143-79039162 | None:intergenic | 55.0% |
| AAAACCGAGGCCCCGTGGTA+GGG | + | chr3.1:79037739-79037758 | MS.gene06225:CDS | 60.0% | |
| ATATCCCTACCACGGGGCCT+CGG | - | chr3.1:79037746-79037765 | None:intergenic | 60.0% | |
| ! | TTCCTAGGCCGTGTTGGTGG+CGG | + | chr3.1:79038446-79038465 | MS.gene06225:CDS | 60.0% |
| GAAAACCGAGGCCCCGTGGT+AGG | + | chr3.1:79037738-79037757 | MS.gene06225:CDS | 65.0% | |
| ! | ACCACGGGGCCTCGGTTTTC+TGG | - | chr3.1:79037738-79037757 | None:intergenic | 65.0% |
| ! | CCACGGGGCCTCGGTTTTCT+GGG | - | chr3.1:79037737-79037756 | None:intergenic | 65.0% |
| AGCCGCCACCAACACGGCCT+AGG | - | chr3.1:79038451-79038470 | None:intergenic | 70.0% | |
| CCCAGAAAACCGAGGCCCCG+TGG | + | chr3.1:79037734-79037753 | MS.gene06225:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 79036756 | 79039342 | 79036756 | ID=MS.gene06225 |
| chr3.1 | mRNA | 79036756 | 79039342 | 79036756 | ID=MS.gene06225.t1;Parent=MS.gene06225 |
| chr3.1 | exon | 79036756 | 79037091 | 79036756 | ID=MS.gene06225.t1.exon1;Parent=MS.gene06225.t1 |
| chr3.1 | CDS | 79036756 | 79037091 | 79036756 | ID=cds.MS.gene06225.t1;Parent=MS.gene06225.t1 |
| chr3.1 | exon | 79037654 | 79038492 | 79037654 | ID=MS.gene06225.t1.exon2;Parent=MS.gene06225.t1 |
| chr3.1 | CDS | 79037654 | 79038492 | 79037654 | ID=cds.MS.gene06225.t1;Parent=MS.gene06225.t1 |
| chr3.1 | exon | 79038823 | 79039342 | 79038823 | ID=MS.gene06225.t1.exon3;Parent=MS.gene06225.t1 |
| chr3.1 | CDS | 79038823 | 79039342 | 79038823 | ID=cds.MS.gene06225.t1;Parent=MS.gene06225.t1 |
| Gene Sequence |
| Protein sequence |
