Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055501.t1 | XP_003602802.1 | 98 | 564 | 11 | 0 | 1 | 564 | 1 | 564 | 2.00E-299 | 1037.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055501.t1 | F4I9E1 | 22.7 | 555 | 400 | 8 | 15 | 564 | 43 | 573 | 6.2e-28 | 127.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055501.t1 | G7J3V8 | 98.0 | 564 | 11 | 0 | 1 | 564 | 1 | 564 | 1.4e-299 | 1037.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055501 | MS.gene05625 | 0.834527 | 2.85E-56 | -1.69E-46 |
| MS.gene055501 | MS.gene056305 | 0.815708 | 8.05E-52 | -1.69E-46 |
| MS.gene055501 | MS.gene06225 | 0.959122 | 4.28E-117 | -1.69E-46 |
| MS.gene055501 | MS.gene065046 | 0.8095 | 1.84E-50 | -1.69E-46 |
| MS.gene055501 | MS.gene067949 | 0.814314 | 1.64E-51 | -1.69E-46 |
| MS.gene055501 | MS.gene071237 | 0.801913 | 7.20E-49 | -1.69E-46 |
| MS.gene055501 | MS.gene071520 | 0.834027 | 3.80E-56 | -1.69E-46 |
| MS.gene055501 | MS.gene08119 | 0.839521 | 1.51E-57 | -1.69E-46 |
| MS.gene055501 | MS.gene29250 | 0.813296 | 2.75E-51 | -1.69E-46 |
| MS.gene055501 | MS.gene36575 | 0.805158 | 1.53E-49 | -1.69E-46 |
| MS.gene055501 | MS.gene36682 | 0.805854 | 1.09E-49 | -1.69E-46 |
| MS.gene055501 | MS.gene56071 | 0.831437 | 1.67E-55 | -1.69E-46 |
| MS.gene055501 | MS.gene56072 | 0.821725 | 3.47E-53 | -1.69E-46 |
| MS.gene055501 | MS.gene97931 | 0.80072 | 1.26E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055501.t1 | MTR_3g099150 | 98.759 | 564 | 7 | 0 | 1 | 564 | 1 | 564 | 0.0 | 1131 |
| MS.gene055501.t1 | MTR_7g029015 | 50.420 | 595 | 246 | 6 | 1 | 559 | 1 | 582 | 0.0 | 556 |
| MS.gene055501.t1 | MTR_1g111510 | 35.053 | 562 | 323 | 10 | 10 | 554 | 21 | 557 | 5.04e-101 | 318 |
| MS.gene055501.t1 | MTR_2g450710 | 33.216 | 566 | 340 | 6 | 16 | 561 | 13 | 560 | 1.16e-99 | 313 |
| MS.gene055501.t1 | MTR_1g111540 | 34.043 | 564 | 326 | 10 | 10 | 554 | 21 | 557 | 2.06e-99 | 313 |
| MS.gene055501.t1 | MTR_1g111530 | 34.458 | 563 | 315 | 10 | 15 | 554 | 22 | 553 | 1.03e-98 | 311 |
| MS.gene055501.t1 | MTR_5g022380 | 35.663 | 558 | 311 | 11 | 9 | 557 | 7 | 525 | 3.15e-98 | 308 |
| MS.gene055501.t1 | MTR_1g111550 | 34.116 | 554 | 328 | 10 | 15 | 554 | 25 | 555 | 2.94e-96 | 305 |
| MS.gene055501.t1 | MTR_4g116210 | 32.474 | 582 | 348 | 7 | 7 | 561 | 3 | 566 | 4.37e-95 | 301 |
| MS.gene055501.t1 | MTR_4g073690 | 34.608 | 549 | 327 | 7 | 15 | 557 | 15 | 537 | 4.52e-95 | 301 |
| MS.gene055501.t1 | MTR_7g102880 | 34.775 | 555 | 333 | 8 | 15 | 554 | 29 | 569 | 1.03e-93 | 299 |
| MS.gene055501.t1 | MTR_1g050550 | 33.692 | 558 | 335 | 9 | 15 | 554 | 24 | 564 | 1.14e-90 | 291 |
| MS.gene055501.t1 | MTR_1g059080 | 32.162 | 569 | 342 | 10 | 6 | 554 | 11 | 555 | 2.08e-85 | 276 |
| MS.gene055501.t1 | MTR_2g100400 | 31.810 | 569 | 323 | 11 | 10 | 554 | 2 | 529 | 4.26e-81 | 264 |
| MS.gene055501.t1 | MTR_5g090570 | 32.188 | 553 | 327 | 10 | 15 | 556 | 11 | 526 | 4.84e-74 | 245 |
| MS.gene055501.t1 | MTR_4g073690 | 36.031 | 383 | 237 | 4 | 15 | 392 | 15 | 394 | 5.76e-70 | 230 |
| MS.gene055501.t1 | MTR_5g022380 | 34.581 | 454 | 249 | 11 | 113 | 557 | 1 | 415 | 2.28e-65 | 219 |
| MS.gene055501.t1 | MTR_7g083660 | 25.480 | 573 | 370 | 11 | 13 | 554 | 5 | 551 | 1.68e-38 | 149 |
| MS.gene055501.t1 | MTR_2g104250 | 25.937 | 347 | 187 | 5 | 231 | 561 | 4 | 296 | 1.02e-33 | 130 |
| MS.gene055501.t1 | MTR_5g026350 | 23.720 | 586 | 368 | 16 | 14 | 553 | 6 | 558 | 1.95e-29 | 122 |
| MS.gene055501.t1 | MTR_3g466040 | 23.949 | 547 | 369 | 10 | 15 | 554 | 7 | 513 | 1.36e-28 | 119 |
| MS.gene055501.t1 | MTR_3g466110 | 23.789 | 475 | 339 | 7 | 15 | 481 | 7 | 466 | 6.80e-26 | 111 |
| MS.gene055501.t1 | MTR_8g071920 | 27.011 | 174 | 126 | 1 | 14 | 187 | 47 | 219 | 2.64e-15 | 79.3 |
| MS.gene055501.t1 | MTR_8g071920 | 26.482 | 253 | 155 | 7 | 311 | 556 | 374 | 602 | 1.19e-12 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055501.t1 | AT5G50520 | 50.269 | 557 | 245 | 8 | 5 | 557 | 6 | 534 | 0.0 | 553 |
| MS.gene055501.t1 | AT5G50630 | 50.269 | 557 | 245 | 8 | 5 | 557 | 6 | 534 | 0.0 | 553 |
| MS.gene055501.t1 | AT3G01930 | 50.000 | 604 | 235 | 8 | 3 | 562 | 4 | 584 | 0.0 | 545 |
| MS.gene055501.t1 | AT5G14120 | 47.906 | 597 | 253 | 6 | 3 | 562 | 4 | 579 | 0.0 | 531 |
| MS.gene055501.t1 | AT3G01930 | 51.253 | 439 | 164 | 6 | 3 | 398 | 4 | 435 | 4.49e-135 | 400 |
| MS.gene055501.t1 | AT3G01930 | 47.368 | 494 | 193 | 8 | 113 | 562 | 1 | 471 | 6.08e-135 | 401 |
| MS.gene055501.t1 | AT2G39210 | 36.268 | 568 | 309 | 11 | 15 | 557 | 21 | 560 | 2.44e-105 | 329 |
| MS.gene055501.t1 | AT2G28120 | 34.955 | 555 | 330 | 9 | 11 | 554 | 13 | 547 | 1.88e-99 | 313 |
| MS.gene055501.t1 | AT4G34950 | 33.622 | 577 | 321 | 13 | 15 | 562 | 16 | 559 | 1.47e-97 | 308 |
| MS.gene055501.t1 | AT1G80530 | 32.124 | 579 | 339 | 7 | 7 | 561 | 3 | 551 | 1.20e-91 | 292 |
| MS.gene055501.t1 | AT2G16660 | 33.803 | 568 | 323 | 11 | 5 | 557 | 4 | 533 | 2.02e-90 | 288 |
| MS.gene055501.t1 | AT1G74780 | 32.212 | 565 | 314 | 12 | 15 | 556 | 7 | 525 | 7.71e-80 | 261 |
| MS.gene055501.t1 | AT2G34350 | 30.511 | 567 | 324 | 9 | 10 | 556 | 2 | 518 | 2.46e-79 | 259 |
| MS.gene055501.t1 | AT2G34350 | 30.511 | 567 | 324 | 9 | 10 | 556 | 2 | 518 | 2.46e-79 | 259 |
| MS.gene055501.t1 | AT1G18940 | 31.139 | 562 | 317 | 12 | 15 | 557 | 9 | 519 | 3.83e-74 | 245 |
| MS.gene055501.t1 | AT2G34355 | 29.505 | 566 | 325 | 13 | 12 | 556 | 4 | 516 | 1.06e-71 | 239 |
| MS.gene055501.t1 | AT2G16660 | 34.491 | 403 | 235 | 7 | 4 | 392 | 3 | 390 | 4.03e-65 | 218 |
| MS.gene055501.t1 | AT2G34355 | 29.187 | 418 | 230 | 12 | 152 | 556 | 2 | 366 | 1.60e-41 | 154 |
| MS.gene055501.t1 | AT4G19450 | 27.148 | 582 | 358 | 17 | 14 | 556 | 6 | 560 | 2.86e-40 | 154 |
| MS.gene055501.t1 | AT5G45275 | 24.788 | 589 | 359 | 14 | 14 | 555 | 6 | 557 | 1.25e-34 | 138 |
| MS.gene055501.t1 | AT3G01630 | 24.645 | 564 | 371 | 14 | 14 | 559 | 22 | 549 | 5.37e-33 | 133 |
| MS.gene055501.t1 | AT3G01630 | 24.645 | 564 | 371 | 14 | 14 | 559 | 40 | 567 | 6.28e-33 | 133 |
| MS.gene055501.t1 | AT4G19450 | 27.228 | 404 | 253 | 12 | 14 | 381 | 6 | 404 | 8.72e-33 | 130 |
| MS.gene055501.t1 | AT1G31470 | 24.561 | 570 | 373 | 17 | 14 | 564 | 42 | 573 | 5.03e-32 | 130 |
| MS.gene055501.t1 | AT2G30300 | 23.913 | 552 | 347 | 13 | 16 | 555 | 8 | 498 | 3.15e-26 | 112 |
Find 132 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTTCCTTCTTTGCCTTTA+TGG | 0.127424 | 3.2:+82510436 | MS.gene055501:CDS |
| GCAGCAACTTCAGAAGTATT+TGG | 0.160612 | 3.2:+82512336 | MS.gene055501:CDS |
| CTTAAGTGTGGCTAAGGATT+TGG | 0.185948 | 3.2:+82510290 | MS.gene055501:CDS |
| GTTGGATCTCTGCTTGTATC+TGG | 0.224970 | 3.2:+82512408 | MS.gene055501:CDS |
| AAGCAACTCGTTATTATTTC+CGG | 0.233736 | 3.2:-82512532 | None:intergenic |
| ATGCACAGAATACAAATTTA+TGG | 0.236670 | 3.2:+82512474 | MS.gene055501:CDS |
| ATGTTTGTTTCTATCGTCTT+AGG | 0.238459 | 3.2:+82511679 | MS.gene055501:CDS |
| ACCAACACGGCCTAGGAAAT+TGG | 0.240141 | 3.2:-82511800 | None:intergenic |
| GGGTCAGATTTGTCAATCTT+TGG | 0.262023 | 3.2:+82511735 | MS.gene055501:CDS |
| CTTCAGAATGTTGTTGGTTA+TGG | 0.262768 | 3.2:+82510387 | MS.gene055501:CDS |
| TTATGGAGCCTCCGCGAAAT+TGG | 0.264431 | 3.2:+82512491 | MS.gene055501:CDS |
| TTGGCTTAAGCGGCGCAATT+TGG | 0.265189 | 3.2:+82511137 | MS.gene055501:CDS |
| TTCATCTTGGTGGGACAAAA+TGG | 0.273357 | 3.2:+82511022 | MS.gene055501:CDS |
| AATTATAGTTCCTATTATAT+TGG | 0.276451 | 3.2:+82511447 | MS.gene055501:CDS |
| CTCTTAGCTGCCTATTTAAT+GGG | 0.282295 | 3.2:+82511337 | MS.gene055501:CDS |
| TTATTTCCGGTACCATAATA+AGG | 0.284663 | 3.2:-82512519 | None:intergenic |
| AATATAATAGGAACTATAAT+TGG | 0.296483 | 3.2:-82511445 | None:intergenic |
| CAACAAAACTCCCATTAAAT+AGG | 0.301844 | 3.2:-82511347 | None:intergenic |
| TCAGCAAAGCTTGGCCTGTT+TGG | 0.301872 | 3.2:+82510343 | MS.gene055501:CDS |
| AAATTGGCAATGCCTTATTA+TGG | 0.304344 | 3.2:+82512507 | MS.gene055501:CDS |
| TCTCTTAGCTGCCTATTTAA+TGG | 0.306613 | 3.2:+82511336 | MS.gene055501:CDS |
| GAGAAGAAAACCAATATAAT+AGG | 0.316323 | 3.2:-82511457 | None:intergenic |
| ATAGCAATAACCATGGGTTT+TGG | 0.320887 | 3.2:+82512285 | MS.gene055501:CDS |
| TTAAGTGTGGCTAAGGATTT+GGG | 0.328079 | 3.2:+82510291 | MS.gene055501:CDS |
| CAGCAAAGCTTGGCCTGTTT+GGG | 0.333110 | 3.2:+82510344 | MS.gene055501:CDS |
| CAGCAACTTCAGAAGTATTT+GGG | 0.333578 | 3.2:+82512337 | MS.gene055501:CDS |
| ATTCCCAACTTTATGGTAAT+GGG | 0.335479 | 3.2:+82512664 | MS.gene055501:CDS |
| GCTAGAGAATATGTTTGATT+TGG | 0.340300 | 3.2:+82511369 | MS.gene055501:CDS |
| TATTCCCAACTTTATGGTAA+TGG | 0.342343 | 3.2:+82512663 | MS.gene055501:CDS |
| ATCTTCAAAAGTAACATGTT+TGG | 0.359540 | 3.2:-82511575 | None:intergenic |
| GGTCAGATTTGTCAATCTTT+GGG | 0.365348 | 3.2:+82511736 | MS.gene055501:CDS |
| GTTTGGGCAGTTATACTTGT+TGG | 0.387389 | 3.2:+82510360 | MS.gene055501:CDS |
| GTTTCTATCGTCTTAGGTTG+TGG | 0.394738 | 3.2:+82511685 | MS.gene055501:CDS |
| AAAATCAAAGAGGCTTGATC+AGG | 0.403361 | 3.2:-82511187 | None:intergenic |
| TATTTGGGTTAAAGAACTTT+GGG | 0.404022 | 3.2:+82512352 | MS.gene055501:CDS |
| GCAGGAACAGCTTACATGTT+TGG | 0.404543 | 3.2:+82510210 | MS.gene055501:CDS |
| ATCGTCTTAGGTTGTGGATC+AGG | 0.406553 | 3.2:+82511691 | MS.gene055501:CDS |
| GTAGTTTGCTTGGTTGCAGC+TGG | 0.409953 | 3.2:+82512603 | MS.gene055501:CDS |
| TCTAGACCCTCTGATGAATC+AGG | 0.413206 | 3.2:+82511286 | MS.gene055501:CDS |
| CACATACATACCGTCCATAA+AGG | 0.413324 | 3.2:-82510450 | None:intergenic |
| ATTTACCATTGCTTGTGTTA+AGG | 0.413356 | 3.2:-82511641 | None:intergenic |
| TTGTTGGTTATGGTCTTGTT+TGG | 0.418799 | 3.2:+82510397 | MS.gene055501:CDS |
| TACTATACCATAGGTTTGGT+TGG | 0.429856 | 3.2:+82512249 | MS.gene055501:CDS |
| GACAACGTTGGACTTCTAGC+TGG | 0.436727 | 3.2:+82510315 | MS.gene055501:CDS |
| AGCTTTCTTAAGTGTGGCTA+AGG | 0.438962 | 3.2:+82510284 | MS.gene055501:CDS |
| GTATTTGGGTTAAAGAACTT+TGG | 0.439987 | 3.2:+82512351 | MS.gene055501:CDS |
| AAAGTTAAAGAAACCATTGC+TGG | 0.440366 | 3.2:-82511226 | None:intergenic |
| GGTGTTTGTGTGTGCAATGT+GGG | 0.443279 | 3.2:+82510176 | MS.gene055501:CDS |
| CTCCTACTATACCATAGGTT+TGG | 0.445658 | 3.2:+82512245 | MS.gene055501:CDS |
| ACTTCCCATTACCATAAAGT+TGG | 0.446345 | 3.2:-82512668 | None:intergenic |
| TCCTTCTTTGCCTTTATGGA+CGG | 0.447825 | 3.2:+82510440 | MS.gene055501:CDS |
| ATTGCCAACGCCACAAGTCT+CGG | 0.458481 | 3.2:-82512195 | None:intergenic |
| AGAAAAGTTGAAGAAATTTG+TGG | 0.464182 | 3.2:+82510140 | MS.gene055501:CDS |
| CTTCCCATTACCATAAAGTT+GGG | 0.464254 | 3.2:-82512667 | None:intergenic |
| GGTGTCCTTCAGAATGTTGT+TGG | 0.468337 | 3.2:+82510381 | MS.gene055501:CDS |
| ATGTGGGATATGTCATTTGC+AGG | 0.471152 | 3.2:+82510192 | MS.gene055501:CDS |
| ATATCCCTACCACGGGGCCT+CGG | 0.474408 | 3.2:-82511102 | None:intergenic |
| ATCTCTGCTTGTATCTGGAT+TGG | 0.476420 | 3.2:+82512413 | MS.gene055501:CDS |
| CTTACAATTGCTAGCCCAGT+TGG | 0.478016 | 3.2:+82512390 | MS.gene055501:CDS |
| CAATGTTAACATTTATGTAT+CGG | 0.479065 | 3.2:+82511765 | MS.gene055501:CDS |
| TTCCTAGGCCGTGTTGGTGG+CGG | 0.479191 | 3.2:+82511805 | MS.gene055501:CDS |
| ACAAGTATAACTGCCCAAAC+AGG | 0.483574 | 3.2:-82510357 | None:intergenic |
| ATTTGTTATTCCTTGACTTG+TGG | 0.484082 | 3.2:+82512570 | MS.gene055501:CDS |
| GAAAACCGAGGCCCCGTGGT+AGG | 0.484749 | 3.2:+82511097 | MS.gene055501:CDS |
| GAAAAGTTGAAGAAATTTGT+GGG | 0.485863 | 3.2:+82510141 | MS.gene055501:CDS |
| GATTGATTAAAAGTATGAAC+AGG | 0.486679 | 3.2:-82511265 | None:intergenic |
| TGCTAATGCAATTGACCAAT+GGG | 0.487067 | 3.2:-82512316 | None:intergenic |
| AAAGGATTCGTTGGCTTAAG+CGG | 0.491176 | 3.2:+82511127 | MS.gene055501:CDS |
| GCAATGCCTTATTATGGTAC+CGG | 0.495270 | 3.2:+82512513 | MS.gene055501:CDS |
| TCATTGTTCAAAGGACTAAG+AGG | 0.496212 | 3.2:+82512637 | MS.gene055501:CDS |
| ATTCAAGCAGTGATGTCCTT+GGG | 0.509232 | 3.2:+82512219 | MS.gene055501:CDS |
| TCCAATTTCCTAGGCCGTGT+TGG | 0.509421 | 3.2:+82511799 | MS.gene055501:CDS |
| GATACAAGCAGAGATCCAAC+TGG | 0.510888 | 3.2:-82512405 | None:intergenic |
| GATTCAAGCAGTGATGTCCT+TGG | 0.514626 | 3.2:+82512218 | MS.gene055501:CDS |
| GGGATATTGAAAGGATTCGT+TGG | 0.515288 | 3.2:+82511118 | MS.gene055501:CDS |
| ATACTACAACACAGCAGCAT+TGG | 0.515438 | 3.2:+82511051 | MS.gene055501:CDS |
| ACCGTCCATAAAGGCAAAGA+AGG | 0.516260 | 3.2:-82510441 | None:intergenic |
| ACAACGTTGGACTTCTAGCT+GGG | 0.518106 | 3.2:+82510316 | MS.gene055501:CDS |
| AACTTGTCCAACCAAACCTA+TGG | 0.519795 | 3.2:-82512256 | None:intergenic |
| TGAGTTTGATCATTGTTCAA+AGG | 0.522810 | 3.2:+82512628 | MS.gene055501:CDS |
| CTGGGTTTATCAGCAAAGCT+TGG | 0.525007 | 3.2:+82510334 | MS.gene055501:CDS |
| TTGCCAACGCCACAAGTCTC+GGG | 0.527950 | 3.2:-82512194 | None:intergenic |
| AACGAGTTGCTTCTTTGCGA+AGG | 0.528487 | 3.2:+82512543 | MS.gene055501:CDS |
| ATCAGCATATCCAATTTCCT+AGG | 0.530608 | 3.2:+82511790 | MS.gene055501:CDS |
| AGGTGTAGTTGCTGCAACAA+TGG | 0.531721 | 3.2:-82511521 | None:intergenic |
| TGCTAAAATTCCACAAGTCA+AGG | 0.533451 | 3.2:-82512580 | None:intergenic |
| AACCAAACCTATGGTATAGT+AGG | 0.541846 | 3.2:-82512247 | None:intergenic |
| CCTTTCAATATCCCTACCAC+GGG | 0.542176 | 3.2:-82511109 | None:intergenic |
| CCCATGCTGCTCTTTATGAC+TGG | 0.544672 | 3.2:-82510243 | None:intergenic |
| GGACTCTCCTACTATACCAT+AGG | 0.548639 | 3.2:+82512240 | MS.gene055501:CDS |
| TGGTGTTTGTGTGTGCAATG+TGG | 0.552532 | 3.2:+82510175 | MS.gene055501:CDS |
| AATTTCCTAGGCCGTGTTGG+TGG | 0.553242 | 3.2:+82511802 | MS.gene055501:CDS |
| AGAAATTTGTGGGACACAGA+TGG | 0.556960 | 3.2:+82510151 | MS.gene055501:CDS |
| ATAAGGCATTGCCAATTTCG+CGG | 0.557317 | 3.2:-82512502 | None:intergenic |
| AAAACCGAGGCCCCGTGGTA+GGG | 0.558213 | 3.2:+82511098 | MS.gene055501:CDS |
| GTAAAATCCTCTCCTCTATG+TGG | 0.564577 | 3.2:-82511619 | None:intergenic |
| CATAGCAATTGGTCCAGCAA+TGG | 0.568817 | 3.2:+82511213 | MS.gene055501:CDS |
| CCAGTCATAAAGAGCAGCAT+GGG | 0.570468 | 3.2:+82510243 | MS.gene055501:CDS |
| CTGCTAATGCAATTGACCAA+TGG | 0.572591 | 3.2:-82512317 | None:intergenic |
| ATACCCGAGACTTGTGGCGT+TGG | 0.574402 | 3.2:+82512191 | MS.gene055501:CDS |
| ATGAATCCTGATTCATCAGA+GGG | 0.575878 | 3.2:-82511292 | None:intergenic |
| GCAAGTAGCTTTCTTAAGTG+TGG | 0.579267 | 3.2:+82510278 | MS.gene055501:CDS |
| AGCCGCCACCAACACGGCCT+AGG | 0.579659 | 3.2:-82511807 | None:intergenic |
| TTCTGGGAAACTTTGCACAC+AGG | 0.588869 | 3.2:-82511077 | None:intergenic |
| GAAATTTGTGGGACACAGAT+GGG | 0.596755 | 3.2:+82510152 | MS.gene055501:CDS |
| TTTGGCTTGTTGTAACACAC+AGG | 0.597277 | 3.2:+82510415 | MS.gene055501:CDS |
| TGCTATGATGAAAATCAAAG+AGG | 0.602677 | 3.2:-82511197 | None:intergenic |
| TCACTAATCTCATTGTGCAT+AGG | 0.602939 | 3.2:-82511541 | None:intergenic |
| TCCTTTCAATATCCCTACCA+CGG | 0.603422 | 3.2:-82511110 | None:intergenic |
| ACCAGTCATAAAGAGCAGCA+TGG | 0.605771 | 3.2:+82510242 | MS.gene055501:CDS |
| AAGGATTTGGGTGACAACGT+TGG | 0.607484 | 3.2:+82510303 | MS.gene055501:CDS |
| AAATCAAAGAGGCTTGATCA+GGG | 0.611738 | 3.2:-82511186 | None:intergenic |
| ATTTGGATACCCGAGACTTG+TGG | 0.615622 | 3.2:+82512185 | MS.gene055501:CDS |
| TATGTGATAGCAATAACCAT+GGG | 0.616249 | 3.2:+82512279 | MS.gene055501:CDS |
| CATAACCAACAACATTCTGA+AGG | 0.619633 | 3.2:-82510386 | None:intergenic |
| CATGAATCCTGATTCATCAG+AGG | 0.621943 | 3.2:-82511293 | None:intergenic |
| CCCGTGGTAGGGATATTGAA+AGG | 0.631908 | 3.2:+82511109 | MS.gene055501:CDS |
| GTAGTTGCTGCAACAATGGA+TGG | 0.634037 | 3.2:-82511517 | None:intergenic |
| AGAAGTAGCCGCCACCAACA+CGG | 0.636827 | 3.2:-82511813 | None:intergenic |
| TTATGTGATAGCAATAACCA+TGG | 0.640331 | 3.2:+82512278 | MS.gene055501:CDS |
| GGATCCATATCCAAAACCCA+TGG | 0.641880 | 3.2:-82512295 | None:intergenic |
| AAATGCTCCACATAGAGGAG+AGG | 0.647420 | 3.2:+82511612 | MS.gene055501:CDS |
| CCCAGAAAACCGAGGCCCCG+TGG | 0.651101 | 3.2:+82511093 | MS.gene055501:CDS |
| ATTGACAATGATAAACAACA+TGG | 0.655646 | 3.2:+82511714 | MS.gene055501:CDS |
| ACTTCTCTGAAGTTATAGTG+AGG | 0.664718 | 3.2:+82511830 | MS.gene055501:CDS |
| CAAAGTTTCCCAGAAAACCG+AGG | 0.688148 | 3.2:+82511085 | MS.gene055501:CDS |
| TTGACAATGATAAACAACAT+GGG | 0.694598 | 3.2:+82511715 | MS.gene055501:CDS |
| AGGCATTGCCAATTTCGCGG+AGG | 0.700363 | 3.2:-82512499 | None:intergenic |
| ATACAAGCAGAGATCCAACT+GGG | 0.706369 | 3.2:-82512404 | None:intergenic |
| GGTATAGTAGGAGAGTCCCA+AGG | 0.710600 | 3.2:-82512235 | None:intergenic |
| ATTTGTGGGACACAGATGGG+TGG | 0.741545 | 3.2:+82510155 | MS.gene055501:CDS |
| CTTTCAATATCCCTACCACG+GGG | 0.783983 | 3.2:-82511108 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAACAATTTATATTACA+CGG | + | chr3.2:82510937-82510956 | MS.gene055501:intron | 10.0% |
| !! | TTATAAAAAAACTTAAATGT+CGG | - | chr3.2:82512024-82512043 | None:intergenic | 10.0% |
| !! | AATATAATAGGAACTATAAT+TGG | - | chr3.2:82511448-82511467 | None:intergenic | 15.0% |
| !! | AATTATAGTTCCTATTATAT+TGG | + | chr3.2:82511447-82511466 | MS.gene055501:CDS | 15.0% |
| !! | TATGAAATGAAAATAATACA+TGG | - | chr3.2:82510918-82510937 | None:intergenic | 15.0% |
| !!! | AAAAGTATAAAACCATAATT+TGG | - | chr3.2:82510754-82510773 | None:intergenic | 15.0% |
| !!! | ATGTTTTGATACTTTTTTTT+GGG | + | chr3.2:82510726-82510745 | MS.gene055501:intron | 15.0% |
| !!! | TATGTTTTGATACTTTTTTT+TGG | + | chr3.2:82510725-82510744 | MS.gene055501:intron | 15.0% |
| !!! | TGGTTTTATACTTTTTTTTA+AGG | + | chr3.2:82510759-82510778 | MS.gene055501:intron | 15.0% |
| !! | CAATGTTAACATTTATGTAT+CGG | + | chr3.2:82511765-82511784 | MS.gene055501:CDS | 20.0% |
| !! | TCTCAAAATAGAATAAAGAA+GGG | - | chr3.2:82511884-82511903 | None:intergenic | 20.0% |
| !!! | AATTTTCTGTTCAAAAAATC+CGG | - | chr3.2:82512168-82512187 | None:intergenic | 20.0% |
| !!! | GATTTTTTGAACAGAAAATT+TGG | + | chr3.2:82512168-82512187 | MS.gene055501:intron | 20.0% |
| !!! | TCAATATTTGAAGATTTTGA+AGG | - | chr3.2:82511971-82511990 | None:intergenic | 20.0% |
| !!! | TGTTTTGATACTTTTTTTTG+GGG | + | chr3.2:82510727-82510746 | MS.gene055501:intron | 20.0% |
| ! | AGAAAAGTTGAAGAAATTTG+TGG | + | chr3.2:82510140-82510159 | MS.gene055501:CDS | 25.0% |
| ! | ATAGCATTGTAGAATCAAAA+GGG | - | chr3.2:82512123-82512142 | None:intergenic | 25.0% |
| ! | ATCTTCAAAAGTAACATGTT+TGG | - | chr3.2:82511578-82511597 | None:intergenic | 25.0% |
| ! | ATGCACAGAATACAAATTTA+TGG | + | chr3.2:82512474-82512493 | MS.gene055501:CDS | 25.0% |
| ! | ATTGACAATGATAAACAACA+TGG | + | chr3.2:82511714-82511733 | MS.gene055501:CDS | 25.0% |
| ! | CATTTCTCAAGTACAAAATA+AGG | + | chr3.2:82512055-82512074 | MS.gene055501:intron | 25.0% |
| ! | GAAAAGTTGAAGAAATTTGT+GGG | + | chr3.2:82510141-82510160 | MS.gene055501:CDS | 25.0% |
| ! | GAAATGAAAATAATACATGG+TGG | - | chr3.2:82510915-82510934 | None:intergenic | 25.0% |
| ! | GAGAAGAAAACCAATATAAT+AGG | - | chr3.2:82511460-82511479 | None:intergenic | 25.0% |
| ! | GTAAGTAACTAATCTAGTTA+TGG | - | chr3.2:82510677-82510696 | None:intergenic | 25.0% |
| ! | GTCTCAAAATAGAATAAAGA+AGG | - | chr3.2:82511885-82511904 | None:intergenic | 25.0% |
| ! | TTGACAATGATAAACAACAT+GGG | + | chr3.2:82511715-82511734 | MS.gene055501:CDS | 25.0% |
| !! | GATTGATTAAAAGTATGAAC+AGG | - | chr3.2:82511268-82511287 | None:intergenic | 25.0% |
| !! | TATTTGGGTTAAAGAACTTT+GGG | + | chr3.2:82512352-82512371 | MS.gene055501:CDS | 25.0% |
| !! | TTGATTTTCATCATAGCAAT+TGG | + | chr3.2:82511202-82511221 | MS.gene055501:CDS | 25.0% |
| !! | TTTGTAACAATTTGAGTTTG+AGG | + | chr3.2:82512092-82512111 | MS.gene055501:intron | 25.0% |
| !!! | AGTATCAGAGATCTTTTTTT+TGG | - | chr3.2:82511907-82511926 | None:intergenic | 25.0% |
| AAAGTTAAAGAAACCATTGC+TGG | - | chr3.2:82511229-82511248 | None:intergenic | 30.0% | |
| AAGCAACTCGTTATTATTTC+CGG | - | chr3.2:82512535-82512554 | None:intergenic | 30.0% | |
| ATTCCCAACTTTATGGTAAT+GGG | + | chr3.2:82512664-82512683 | MS.gene055501:CDS | 30.0% | |
| ATTTACCATTGCTTGTGTTA+AGG | - | chr3.2:82511644-82511663 | None:intergenic | 30.0% | |
| CAACAAAACTCCCATTAAAT+AGG | - | chr3.2:82511350-82511369 | None:intergenic | 30.0% | |
| CATAGCATTGTAGAATCAAA+AGG | - | chr3.2:82512124-82512143 | None:intergenic | 30.0% | |
| CTTTCATATTGAATCAAGTG+TGG | + | chr3.2:82510623-82510642 | MS.gene055501:intron | 30.0% | |
| GCTAGAGAATATGTTTGATT+TGG | + | chr3.2:82511369-82511388 | MS.gene055501:CDS | 30.0% | |
| TAACTAATCTAGTTATGGTG+AGG | - | chr3.2:82510672-82510691 | None:intergenic | 30.0% | |
| TATGTGATAGCAATAACCAT+GGG | + | chr3.2:82512279-82512298 | MS.gene055501:CDS | 30.0% | |
| TATTCCCAACTTTATGGTAA+TGG | + | chr3.2:82512663-82512682 | MS.gene055501:CDS | 30.0% | |
| TGAGTTTGATCATTGTTCAA+AGG | + | chr3.2:82512628-82512647 | MS.gene055501:CDS | 30.0% | |
| TGCTATGATGAAAATCAAAG+AGG | - | chr3.2:82511200-82511219 | None:intergenic | 30.0% | |
| TTATGTGATAGCAATAACCA+TGG | + | chr3.2:82512278-82512297 | MS.gene055501:CDS | 30.0% | |
| TTATTTCCGGTACCATAATA+AGG | - | chr3.2:82512522-82512541 | None:intergenic | 30.0% | |
| ! | AAATTGGCAATGCCTTATTA+TGG | + | chr3.2:82512507-82512526 | MS.gene055501:CDS | 30.0% |
| ! | GTATTTGGGTTAAAGAACTT+TGG | + | chr3.2:82512351-82512370 | MS.gene055501:CDS | 30.0% |
| ! | TTCTACTAGATGTTGTTGTT+TGG | + | chr3.2:82510566-82510585 | MS.gene055501:intron | 30.0% |
| ! | TTTTACCTTAACACAAGCAA+TGG | + | chr3.2:82511636-82511655 | MS.gene055501:CDS | 30.0% |
| !! | ATGTTTGTTTCTATCGTCTT+AGG | + | chr3.2:82511679-82511698 | MS.gene055501:CDS | 30.0% |
| !! | ATTTGTTATTCCTTGACTTG+TGG | + | chr3.2:82512570-82512589 | MS.gene055501:CDS | 30.0% |
| !!! | AATTTTAGCAGTAGTTTGCT+TGG | + | chr3.2:82512593-82512612 | MS.gene055501:CDS | 30.0% |
| !!! | AGGTTTTATTCCCAACTTTA+TGG | + | chr3.2:82512657-82512676 | MS.gene055501:CDS | 30.0% |
| !!! | CAATGGTAAATGCTGATTTT+TGG | + | chr3.2:82511653-82511672 | MS.gene055501:CDS | 30.0% |
| !!! | CTATGTTTTTTCATCTTGGT+GGG | + | chr3.2:82511013-82511032 | MS.gene055501:CDS | 30.0% |
| !!! | TTTTTTTGGGGACCAAATTA+TGG | + | chr3.2:82510739-82510758 | MS.gene055501:intron | 30.0% |
| AAAATCAAAGAGGCTTGATC+AGG | - | chr3.2:82511190-82511209 | None:intergenic | 35.0% | |
| AAATCAAAGAGGCTTGATCA+GGG | - | chr3.2:82511189-82511208 | None:intergenic | 35.0% | |
| AACCAAACCTATGGTATAGT+AGG | - | chr3.2:82512250-82512269 | None:intergenic | 35.0% | |
| ACTTCCCATTACCATAAAGT+TGG | - | chr3.2:82512671-82512690 | None:intergenic | 35.0% | |
| AGCTGCAAATTATCAATCTC+TGG | - | chr3.2:82510995-82511014 | None:intergenic | 35.0% | |
| ATCAGCATATCCAATTTCCT+AGG | + | chr3.2:82511790-82511809 | MS.gene055501:CDS | 35.0% | |
| ATGAATCCTGATTCATCAGA+GGG | - | chr3.2:82511295-82511314 | None:intergenic | 35.0% | |
| CAAAAAAATGCTCCACATAG+AGG | + | chr3.2:82511607-82511626 | MS.gene055501:CDS | 35.0% | |
| CATAACCAACAACATTCTGA+AGG | - | chr3.2:82510389-82510408 | None:intergenic | 35.0% | |
| CTCTTAGCTGCCTATTTAAT+GGG | + | chr3.2:82511337-82511356 | MS.gene055501:CDS | 35.0% | |
| CTTCCCATTACCATAAAGTT+GGG | - | chr3.2:82512670-82512689 | None:intergenic | 35.0% | |
| GGTCAGATTTGTCAATCTTT+GGG | + | chr3.2:82511736-82511755 | MS.gene055501:CDS | 35.0% | |
| TCACTAATCTCATTGTGCAT+AGG | - | chr3.2:82511544-82511563 | None:intergenic | 35.0% | |
| TCATTGTTCAAAGGACTAAG+AGG | + | chr3.2:82512637-82512656 | MS.gene055501:CDS | 35.0% | |
| TCTAGTTATGGTGAGGAAAA+AGG | - | chr3.2:82510665-82510684 | None:intergenic | 35.0% | |
| TCTCTTAGCTGCCTATTTAA+TGG | + | chr3.2:82511336-82511355 | MS.gene055501:CDS | 35.0% | |
| TGCTAAAATTCCACAAGTCA+AGG | - | chr3.2:82512583-82512602 | None:intergenic | 35.0% | |
| TGCTAATGCAATTGACCAAT+GGG | - | chr3.2:82512319-82512338 | None:intergenic | 35.0% | |
| TTAAGTGTGGCTAAGGATTT+GGG | + | chr3.2:82510291-82510310 | MS.gene055501:CDS | 35.0% | |
| TTCAAAAAATCCGGCAAAGT+TGG | - | chr3.2:82512159-82512178 | None:intergenic | 35.0% | |
| ! | ATAGCAATAACCATGGGTTT+TGG | + | chr3.2:82512285-82512304 | MS.gene055501:CDS | 35.0% |
| ! | CTTCAGAATGTTGTTGGTTA+TGG | + | chr3.2:82510387-82510406 | MS.gene055501:CDS | 35.0% |
| ! | TACTATACCATAGGTTTGGT+TGG | + | chr3.2:82512249-82512268 | MS.gene055501:CDS | 35.0% |
| !! | ACTTCTCTGAAGTTATAGTG+AGG | + | chr3.2:82511830-82511849 | MS.gene055501:CDS | 35.0% |
| !! | CAGCAACTTCAGAAGTATTT+GGG | + | chr3.2:82512337-82512356 | MS.gene055501:CDS | 35.0% |
| !! | TAAACCAAAAAGTGCTGATG+AGG | + | chr3.2:82511480-82511499 | MS.gene055501:CDS | 35.0% |
| !! | TTGTTGGTTATGGTCTTGTT+TGG | + | chr3.2:82510397-82510416 | MS.gene055501:CDS | 35.0% |
| !!! | ATAACCATGGGTTTTGGATA+TGG | + | chr3.2:82512291-82512310 | MS.gene055501:CDS | 35.0% |
| !!! | CTATGTGGAGCATTTTTTTG+CGG | - | chr3.2:82511607-82511626 | None:intergenic | 35.0% |
| !!! | GCAGCTATGTTTTTTCATCT+TGG | + | chr3.2:82511009-82511028 | MS.gene055501:intron | 35.0% |
| !!! | GCTATGTTTTTTCATCTTGG+TGG | + | chr3.2:82511012-82511031 | MS.gene055501:intron | 35.0% |
| AACTTGTCCAACCAAACCTA+TGG | - | chr3.2:82512259-82512278 | None:intergenic | 40.0% | |
| ACAAGTATAACTGCCCAAAC+AGG | - | chr3.2:82510360-82510379 | None:intergenic | 40.0% | |
| AGAAATTTGTGGGACACAGA+TGG | + | chr3.2:82510151-82510170 | MS.gene055501:CDS | 40.0% | |
| AGCTTTCTTAAGTGTGGCTA+AGG | + | chr3.2:82510284-82510303 | MS.gene055501:CDS | 40.0% | |
| ATACAAGCAGAGATCCAACT+GGG | - | chr3.2:82512407-82512426 | None:intergenic | 40.0% | |
| ATACTACAACACAGCAGCAT+TGG | + | chr3.2:82511051-82511070 | MS.gene055501:CDS | 40.0% | |
| ATCTCTGCTTGTATCTGGAT+TGG | + | chr3.2:82512413-82512432 | MS.gene055501:CDS | 40.0% | |
| ATTCAAGCAGTGATGTCCTT+GGG | + | chr3.2:82512219-82512238 | MS.gene055501:CDS | 40.0% | |
| CACATACATACCGTCCATAA+AGG | - | chr3.2:82510453-82510472 | None:intergenic | 40.0% | |
| CATGAATCCTGATTCATCAG+AGG | - | chr3.2:82511296-82511315 | None:intergenic | 40.0% | |
| CTCCTACTATACCATAGGTT+TGG | + | chr3.2:82512245-82512264 | MS.gene055501:CDS | 40.0% | |
| CTGCTAATGCAATTGACCAA+TGG | - | chr3.2:82512320-82512339 | None:intergenic | 40.0% | |
| CTTAAGTGTGGCTAAGGATT+TGG | + | chr3.2:82510290-82510309 | MS.gene055501:CDS | 40.0% | |
| GAAATTTGTGGGACACAGAT+GGG | + | chr3.2:82510152-82510171 | MS.gene055501:CDS | 40.0% | |
| GCAAGTAGCTTTCTTAAGTG+TGG | + | chr3.2:82510278-82510297 | MS.gene055501:CDS | 40.0% | |
| GGGATATTGAAAGGATTCGT+TGG | + | chr3.2:82511118-82511137 | MS.gene055501:CDS | 40.0% | |
| GGGTCAGATTTGTCAATCTT+TGG | + | chr3.2:82511735-82511754 | MS.gene055501:CDS | 40.0% | |
| GTAAAATCCTCTCCTCTATG+TGG | - | chr3.2:82511622-82511641 | None:intergenic | 40.0% | |
| GTTTGGGCAGTTATACTTGT+TGG | + | chr3.2:82510360-82510379 | MS.gene055501:CDS | 40.0% | |
| TCCTTCTTTGCCTTTATGGA+CGG | + | chr3.2:82510440-82510459 | MS.gene055501:CDS | 40.0% | |
| TCCTTTCAATATCCCTACCA+CGG | - | chr3.2:82511113-82511132 | None:intergenic | 40.0% | |
| TTCATCTTGGTGGGACAAAA+TGG | + | chr3.2:82511022-82511041 | MS.gene055501:CDS | 40.0% | |
| ! | ATGTGGGATATGTCATTTGC+AGG | + | chr3.2:82510192-82510211 | MS.gene055501:CDS | 40.0% |
| ! | GCAATGCCTTATTATGGTAC+CGG | + | chr3.2:82512513-82512532 | MS.gene055501:CDS | 40.0% |
| ! | GTTTCTATCGTCTTAGGTTG+TGG | + | chr3.2:82511685-82511704 | MS.gene055501:CDS | 40.0% |
| ! | TGTTCCTCATCAGCACTTTT+TGG | - | chr3.2:82511487-82511506 | None:intergenic | 40.0% |
| !! | AAAGGATTCGTTGGCTTAAG+CGG | + | chr3.2:82511127-82511146 | MS.gene055501:CDS | 40.0% |
| !! | ATAAGGCATTGCCAATTTCG+CGG | - | chr3.2:82512505-82512524 | None:intergenic | 40.0% |
| !! | GCAGCAACTTCAGAAGTATT+TGG | + | chr3.2:82512336-82512355 | MS.gene055501:CDS | 40.0% |
| !! | GTTTTGGATATGGATCCCAT+TGG | + | chr3.2:82512301-82512320 | MS.gene055501:CDS | 40.0% |
| !! | TTTGGCTTGTTGTAACACAC+AGG | + | chr3.2:82510415-82510434 | MS.gene055501:CDS | 40.0% |
| AAAATCCGGCAAAGTTGGAG+CGG | - | chr3.2:82512154-82512173 | None:intergenic | 45.0% | |
| AAATGCTCCACATAGAGGAG+AGG | + | chr3.2:82511612-82511631 | MS.gene055501:CDS | 45.0% | |
| AACGAGTTGCTTCTTTGCGA+AGG | + | chr3.2:82512543-82512562 | MS.gene055501:CDS | 45.0% | |
| AAGGATTTGGGTGACAACGT+TGG | + | chr3.2:82510303-82510322 | MS.gene055501:CDS | 45.0% | |
| ACCAGTCATAAAGAGCAGCA+TGG | + | chr3.2:82510242-82510261 | MS.gene055501:CDS | 45.0% | |
| ACCGTCCATAAAGGCAAAGA+AGG | - | chr3.2:82510444-82510463 | None:intergenic | 45.0% | |
| AGGTGTAGTTGCTGCAACAA+TGG | - | chr3.2:82511524-82511543 | None:intergenic | 45.0% | |
| ATTTGGATACCCGAGACTTG+TGG | + | chr3.2:82512185-82512204 | MS.gene055501:CDS | 45.0% | |
| CAAAGTTTCCCAGAAAACCG+AGG | + | chr3.2:82511085-82511104 | MS.gene055501:CDS | 45.0% | |
| CATAGCAATTGGTCCAGCAA+TGG | + | chr3.2:82511213-82511232 | MS.gene055501:CDS | 45.0% | |
| CCAGTCATAAAGAGCAGCAT+GGG | + | chr3.2:82510243-82510262 | MS.gene055501:CDS | 45.0% | |
| CCTTTCAATATCCCTACCAC+GGG | - | chr3.2:82511112-82511131 | None:intergenic | 45.0% | |
| CTGGGTTTATCAGCAAAGCT+TGG | + | chr3.2:82510334-82510353 | MS.gene055501:CDS | 45.0% | |
| CTTACAATTGCTAGCCCAGT+TGG | + | chr3.2:82512390-82512409 | MS.gene055501:CDS | 45.0% | |
| CTTTCAATATCCCTACCACG+GGG | - | chr3.2:82511111-82511130 | None:intergenic | 45.0% | |
| GATACAAGCAGAGATCCAAC+TGG | - | chr3.2:82512408-82512427 | None:intergenic | 45.0% | |
| GATTCAAGCAGTGATGTCCT+TGG | + | chr3.2:82512218-82512237 | MS.gene055501:CDS | 45.0% | |
| GCAGGAACAGCTTACATGTT+TGG | + | chr3.2:82510210-82510229 | MS.gene055501:CDS | 45.0% | |
| GGACTCTCCTACTATACCAT+AGG | + | chr3.2:82512240-82512259 | MS.gene055501:CDS | 45.0% | |
| GGATCCATATCCAAAACCCA+TGG | - | chr3.2:82512298-82512317 | None:intergenic | 45.0% | |
| GGCTTCCTTCTTTGCCTTTA+TGG | + | chr3.2:82510436-82510455 | MS.gene055501:CDS | 45.0% | |
| GGTGTCCTTCAGAATGTTGT+TGG | + | chr3.2:82510381-82510400 | MS.gene055501:CDS | 45.0% | |
| GGTGTTTGTGTGTGCAATGT+GGG | + | chr3.2:82510176-82510195 | MS.gene055501:CDS | 45.0% | |
| GTAGTTGCTGCAACAATGGA+TGG | - | chr3.2:82511520-82511539 | None:intergenic | 45.0% | |
| GTTGGATCTCTGCTTGTATC+TGG | + | chr3.2:82512408-82512427 | MS.gene055501:CDS | 45.0% | |
| TCTAGACCCTCTGATGAATC+AGG | + | chr3.2:82511286-82511305 | MS.gene055501:CDS | 45.0% | |
| TGGTGTTTGTGTGTGCAATG+TGG | + | chr3.2:82510175-82510194 | MS.gene055501:CDS | 45.0% | |
| ! | ACAACGTTGGACTTCTAGCT+GGG | + | chr3.2:82510316-82510335 | MS.gene055501:CDS | 45.0% |
| ! | ATCGTCTTAGGTTGTGGATC+AGG | + | chr3.2:82511691-82511710 | MS.gene055501:CDS | 45.0% |
| ! | TTCTGGGAAACTTTGCACAC+AGG | - | chr3.2:82511080-82511099 | None:intergenic | 45.0% |
| AATTTCCTAGGCCGTGTTGG+TGG | + | chr3.2:82511802-82511821 | MS.gene055501:CDS | 50.0% | |
| ACCAACACGGCCTAGGAAAT+TGG | - | chr3.2:82511803-82511822 | None:intergenic | 50.0% | |
| ATGTTCCGCTCCAACTTTGC+CGG | + | chr3.2:82512146-82512165 | MS.gene055501:intron | 50.0% | |
| ATTGCCAACGCCACAAGTCT+CGG | - | chr3.2:82512198-82512217 | None:intergenic | 50.0% | |
| ATTTGTGGGACACAGATGGG+TGG | + | chr3.2:82510155-82510174 | MS.gene055501:CDS | 50.0% | |
| CAGCAAAGCTTGGCCTGTTT+GGG | + | chr3.2:82510344-82510363 | MS.gene055501:CDS | 50.0% | |
| CCCATGCTGCTCTTTATGAC+TGG | - | chr3.2:82510246-82510265 | None:intergenic | 50.0% | |
| CCCGTGGTAGGGATATTGAA+AGG | + | chr3.2:82511109-82511128 | MS.gene055501:CDS | 50.0% | |
| GACAACGTTGGACTTCTAGC+TGG | + | chr3.2:82510315-82510334 | MS.gene055501:CDS | 50.0% | |
| GGTATAGTAGGAGAGTCCCA+AGG | - | chr3.2:82512238-82512257 | None:intergenic | 50.0% | |
| TCAGCAAAGCTTGGCCTGTT+TGG | + | chr3.2:82510343-82510362 | MS.gene055501:CDS | 50.0% | |
| TCCAATTTCCTAGGCCGTGT+TGG | + | chr3.2:82511799-82511818 | MS.gene055501:CDS | 50.0% | |
| TTATGGAGCCTCCGCGAAAT+TGG | + | chr3.2:82512491-82512510 | MS.gene055501:CDS | 50.0% | |
| TTGGCTTAAGCGGCGCAATT+TGG | + | chr3.2:82511137-82511156 | MS.gene055501:CDS | 50.0% | |
| !! | GTAGTTTGCTTGGTTGCAGC+TGG | + | chr3.2:82512603-82512622 | MS.gene055501:CDS | 50.0% |
| AGAAGTAGCCGCCACCAACA+CGG | - | chr3.2:82511816-82511835 | None:intergenic | 55.0% | |
| ATACCCGAGACTTGTGGCGT+TGG | + | chr3.2:82512191-82512210 | MS.gene055501:CDS | 55.0% | |
| TTGCCAACGCCACAAGTCTC+GGG | - | chr3.2:82512197-82512216 | None:intergenic | 55.0% | |
| ! | AGGCATTGCCAATTTCGCGG+AGG | - | chr3.2:82512502-82512521 | None:intergenic | 55.0% |
| AAAACCGAGGCCCCGTGGTA+GGG | + | chr3.2:82511098-82511117 | MS.gene055501:CDS | 60.0% | |
| ATATCCCTACCACGGGGCCT+CGG | - | chr3.2:82511105-82511124 | None:intergenic | 60.0% | |
| ! | TTCCTAGGCCGTGTTGGTGG+CGG | + | chr3.2:82511805-82511824 | MS.gene055501:CDS | 60.0% |
| GAAAACCGAGGCCCCGTGGT+AGG | + | chr3.2:82511097-82511116 | MS.gene055501:CDS | 65.0% | |
| ! | ACCACGGGGCCTCGGTTTTC+TGG | - | chr3.2:82511097-82511116 | None:intergenic | 65.0% |
| ! | CCACGGGGCCTCGGTTTTCT+GGG | - | chr3.2:82511096-82511115 | None:intergenic | 65.0% |
| AGCCGCCACCAACACGGCCT+AGG | - | chr3.2:82511810-82511829 | None:intergenic | 70.0% | |
| CCCAGAAAACCGAGGCCCCG+TGG | + | chr3.2:82511093-82511112 | MS.gene055501:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 82510126 | 82512701 | 82510126 | ID=MS.gene055501 |
| chr3.2 | mRNA | 82510126 | 82512701 | 82510126 | ID=MS.gene055501.t1;Parent=MS.gene055501 |
| chr3.2 | exon | 82510126 | 82510461 | 82510126 | ID=MS.gene055501.t1.exon1;Parent=MS.gene055501.t1 |
| chr3.2 | CDS | 82510126 | 82510461 | 82510126 | ID=cds.MS.gene055501.t1;Parent=MS.gene055501.t1 |
| chr3.2 | exon | 82511013 | 82511851 | 82511013 | ID=MS.gene055501.t1.exon2;Parent=MS.gene055501.t1 |
| chr3.2 | CDS | 82511013 | 82511851 | 82511013 | ID=cds.MS.gene055501.t1;Parent=MS.gene055501.t1 |
| chr3.2 | exon | 82512182 | 82512701 | 82512182 | ID=MS.gene055501.t1.exon3;Parent=MS.gene055501.t1 |
| chr3.2 | CDS | 82512182 | 82512701 | 82512182 | ID=cds.MS.gene055501.t1;Parent=MS.gene055501.t1 |
| Gene Sequence |
| Protein sequence |
