AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene062319

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene062319.t1 MTR_5g092150 95.781 474 20 0 1 474 1 474 0.0 910
MS.gene062319.t1 MTR_3g467130 40.402 448 263 4 27 471 31 477 1.55e-119 358
MS.gene062319.t1 MTR_3g467140 39.331 478 282 6 1 471 1 477 2.00e-116 350
MS.gene062319.t1 MTR_8g100135 37.844 473 291 3 2 472 7 478 2.01e-116 350
MS.gene062319.t1 MTR_5g091760 35.220 477 295 7 4 473 10 479 5.00e-104 318
MS.gene062319.t1 MTR_8g100135 35.467 375 241 1 2 375 7 381 1.23e-81 258
MS.gene062319.t1 MTR_3g467140 39.130 345 206 4 130 471 1 344 6.74e-80 252
MS.gene062319.t1 MTR_8g089190 32.166 457 277 11 29 468 1 441 2.39e-78 251
MS.gene062319.t1 MTR_5g020020 32.889 450 293 6 7 451 14 459 4.50e-71 233
MS.gene062319.t1 MTR_6g034940 30.921 456 295 9 7 451 14 460 1.70e-70 232
MS.gene062319.t1 MTR_8g072260 31.158 475 305 9 2 472 10 466 1.43e-69 229
MS.gene062319.t1 MTR_1g019410 30.851 470 306 7 2 464 5 462 1.80e-68 226
MS.gene062319.t1 MTR_5g025610 32.150 479 295 12 1 472 9 464 4.02e-68 225
MS.gene062319.t1 MTR_8g072260 31.250 464 293 9 2 457 10 455 2.77e-67 223
MS.gene062319.t1 MTR_4g086130 30.296 439 293 5 28 464 34 461 7.77e-66 219
MS.gene062319.t1 MTR_5g025610 32.366 448 274 11 1 442 9 433 5.40e-65 216
MS.gene062319.t1 MTR_5g082520 29.762 420 282 7 28 443 27 437 1.18e-64 216
MS.gene062319.t1 MTR_8g077810 30.482 456 304 6 2 448 6 457 2.85e-64 216
MS.gene062319.t1 MTR_8g016180 29.508 427 285 7 22 442 28 444 1.40e-63 213
MS.gene062319.t1 MTR_3g070380 30.641 421 279 7 28 443 28 440 8.64e-63 212
MS.gene062319.t1 MTR_7g033040 27.865 445 312 5 28 470 32 469 1.74e-60 205
MS.gene062319.t1 MTR_4g086040 31.027 448 291 7 22 464 31 465 2.43e-60 205
MS.gene062319.t1 MTR_3g051230 56.725 171 57 4 6 172 3 160 9.40e-59 191
MS.gene062319.t1 MTR_2g031920 28.261 460 316 10 2 451 11 466 1.02e-58 201
MS.gene062319.t1 MTR_5g021220 26.535 456 311 8 8 442 9 461 2.04e-56 195
MS.gene062319.t1 MTR_5g010750 25.664 452 329 4 7 456 9 455 3.09e-56 194
MS.gene062319.t1 MTR_8g076510 26.442 416 298 4 30 442 40 450 5.81e-56 193
MS.gene062319.t1 MTR_5g010750 26.027 438 317 4 7 442 9 441 7.75e-56 192
MS.gene062319.t1 MTR_7g016040 28.315 445 301 8 27 468 31 460 9.05e-55 190
MS.gene062319.t1 MTR_5g014250 25.383 457 332 8 18 468 34 487 5.96e-54 188
MS.gene062319.t1 MTR_3g007320 26.923 468 322 8 2 464 5 457 1.45e-53 187
MS.gene062319.t1 MTR_8g089800 26.398 447 319 8 29 468 43 486 2.43e-53 187
MS.gene062319.t1 MTR_1g037580 28.785 469 315 10 5 468 19 473 8.92e-53 185
MS.gene062319.t1 MTR_8g072260 30.147 408 266 7 2 406 10 401 2.46e-52 183
MS.gene062319.t1 MTR_6g015910 26.709 468 323 8 2 464 5 457 3.77e-52 183
MS.gene062319.t1 MTR_3g112120 28.942 463 313 7 6 459 16 471 5.34e-52 183
MS.gene062319.t1 MTR_0045s0060 26.577 444 308 11 13 451 26 456 5.51e-52 182
MS.gene062319.t1 MTR_2g031930 26.056 426 303 7 29 448 45 464 1.06e-51 182
MS.gene062319.t1 MTR_2g031930 26.253 419 299 8 29 442 41 454 2.01e-51 181
MS.gene062319.t1 MTR_5g014240 26.535 456 327 7 18 468 34 486 1.03e-50 179
MS.gene062319.t1 MTR_8g089190 29.477 363 224 10 29 375 1 347 2.57e-50 175
MS.gene062319.t1 MTR_5g025610 30.713 407 255 10 1 401 9 394 6.59e-50 176
MS.gene062319.t1 MTR_8g016180 27.720 386 264 6 22 401 28 404 1.75e-48 172
MS.gene062319.t1 MTR_0045s0070 25.702 463 323 13 13 468 26 474 2.05e-48 173
MS.gene062319.t1 MTR_8g076940 26.786 448 313 7 6 446 19 458 5.02e-48 172
MS.gene062319.t1 MTR_6g069000 24.667 450 321 5 1 442 12 451 1.92e-47 170
MS.gene062319.t1 MTR_6g069000 24.667 450 321 5 1 442 22 461 3.11e-47 169
MS.gene062319.t1 MTR_0045s0070 26.389 432 298 12 13 438 26 443 3.64e-47 169
MS.gene062319.t1 MTR_8g012970 26.905 420 293 10 29 442 45 456 1.09e-46 169
MS.gene062319.t1 MTR_5g020020 30.904 343 214 8 128 451 47 385 7.82e-46 164
MS.gene062319.t1 MTR_0045s0060 26.632 383 269 8 70 451 3 374 6.00e-45 162
MS.gene062319.t1 MTR_4g005230 25.298 419 301 8 29 442 43 454 1.36e-42 157
MS.gene062319.t1 MTR_0045s0080 26.650 394 265 12 13 400 26 401 2.76e-38 144
MS.gene062319.t1 MTR_8g076940 25.542 415 296 6 6 413 19 427 4.05e-38 144
MS.gene062319.t1 MTR_1g032950 24.396 455 311 9 2 442 9 444 2.30e-37 143
MS.gene062319.t1 MTR_7g016040 26.979 341 235 6 27 366 31 358 4.44e-34 132
MS.gene062319.t1 MTR_6g022450 25.625 480 313 16 7 449 11 483 3.70e-28 117
MS.gene062319.t1 MTR_5g007550 25.657 495 322 15 4 469 11 488 1.73e-26 112
MS.gene062319.t1 MTR_8g076940 24.084 382 277 6 6 380 19 394 2.55e-26 110
MS.gene062319.t1 MTR_8g076940 25.000 348 248 6 6 346 19 360 3.34e-26 110
MS.gene062319.t1 MTR_5g007450 25.455 495 323 15 4 469 11 488 1.72e-25 109
MS.gene062319.t1 MTR_1g031700 23.504 468 321 11 5 446 9 465 4.19e-25 108
MS.gene062319.t1 MTR_8g042020 25.547 411 269 11 62 446 97 496 4.99e-25 108
MS.gene062319.t1 MTR_3g076560 23.313 489 332 12 7 466 29 503 9.37e-24 104
MS.gene062319.t1 MTR_1g103670 23.918 485 298 16 5 446 9 465 1.81e-23 103
MS.gene062319.t1 MTR_2g072400 25.121 414 269 14 62 446 88 489 2.61e-23 103
MS.gene062319.t1 MTR_5g007460 24.138 493 302 14 22 469 2 467 3.26e-23 102
MS.gene062319.t1 MTR_5g021390 24.000 475 316 13 6 446 18 481 1.05e-22 101
MS.gene062319.t1 MTR_0147s0030 24.490 441 291 15 55 468 103 528 4.22e-22 99.8
MS.gene062319.t1 MTR_7g006900 26.615 387 257 15 102 470 94 471 8.80e-22 98.2
MS.gene062319.t1 MTR_3g104560 27.974 311 187 10 149 449 92 375 9.66e-22 97.4
MS.gene062319.t1 MTR_3g104560 27.974 311 187 10 149 449 227 510 1.54e-21 97.8
MS.gene062319.t1 MTR_1g032980 23.684 342 254 6 20 356 7 346 1.66e-21 96.7
MS.gene062319.t1 MTR_5g016440 24.516 465 300 13 10 445 15 457 1.68e-21 97.4
MS.gene062319.t1 MTR_1g103680 23.313 489 307 15 4 449 6 469 1.80e-21 97.4
MS.gene062319.t1 MTR_6g008530 24.016 508 294 21 1 442 8 489 2.11e-21 97.4
MS.gene062319.t1 MTR_7g079440 27.734 256 163 7 205 446 373 620 2.80e-21 97.4
MS.gene062319.t1 MTR_2g010250 24.324 481 312 16 5 446 9 476 7.50e-21 95.5
MS.gene062319.t1 MTR_8g046210 23.881 469 321 13 5 446 15 474 1.09e-20 95.1
MS.gene062319.t1 MTR_2g072380 26.837 313 193 13 159 446 23 324 1.18e-20 93.6
MS.gene062319.t1 MTR_8g469360 27.424 361 229 12 127 467 65 412 2.61e-20 93.2
MS.gene062319.t1 MTR_2g072380 26.837 313 193 13 159 446 163 464 2.75e-20 94.0
MS.gene062319.t1 MTR_2g055430 24.812 399 265 13 74 446 102 491 3.27e-20 93.6
MS.gene062319.t1 MTR_6g017325 26.992 389 255 16 101 470 128 506 5.21e-20 93.2
MS.gene062319.t1 MTR_8g046240 31.197 234 151 5 219 446 245 474 5.97e-20 92.8
MS.gene062319.t1 MTR_8g042060 25.243 412 278 10 58 446 93 497 8.82e-20 92.4
MS.gene062319.t1 MTR_4g089030 22.574 505 337 17 5 472 20 507 9.30e-20 92.4
MS.gene062319.t1 MTR_2g055470 26.359 368 232 12 108 446 134 491 1.02e-19 92.4
MS.gene062319.t1 MTR_8g006450 22.500 440 312 12 24 448 33 458 1.14e-19 92.0
MS.gene062319.t1 MTR_8g008530 26.902 368 224 14 127 467 158 507 2.06e-19 91.3
MS.gene062319.t1 MTR_6g042610 24.481 482 310 21 2 438 8 480 2.28e-19 91.3
MS.gene062319.t1 MTR_4g078110 24.434 442 286 13 28 445 27 444 2.44e-19 90.9
MS.gene062319.t1 MTR_4g071710 23.299 485 317 13 3 446 11 481 3.73e-19 90.5
MS.gene062319.t1 MTR_8g012590 29.688 256 160 7 208 449 223 472 4.57e-19 90.1
MS.gene062319.t1 MTR_8g042000 25.416 421 266 12 58 446 93 497 5.56e-19 90.1
MS.gene062319.t1 MTR_2g010330 23.349 424 272 13 64 446 67 478 6.03e-19 89.7
MS.gene062319.t1 MTR_8g076290 23.832 428 283 13 30 425 36 452 7.68e-19 89.4
MS.gene062319.t1 MTR_4g102310 22.616 451 308 13 22 443 32 470 8.03e-19 89.4
MS.gene062319.t1 MTR_4g095050 22.965 479 316 16 6 449 8 468 8.30e-19 89.4
MS.gene062319.t1 MTR_4g104540 27.027 296 193 9 169 446 109 399 1.37e-18 88.2
MS.gene062319.t1 MTR_5g018980 23.673 452 302 16 28 446 33 474 1.71e-18 88.6
MS.gene062319.t1 MTR_2g072340 25.879 313 196 12 159 446 188 489 1.77e-18 88.6
MS.gene062319.t1 MTR_5g016410 24.628 471 317 17 4 449 7 464 2.08e-18 88.2
MS.gene062319.t1 MTR_2g010290 22.436 468 324 13 5 446 49 503 2.35e-18 88.2
MS.gene062319.t1 MTR_6g008430 24.536 485 305 20 4 442 9 478 2.66e-18 87.8
MS.gene062319.t1 MTR_2g072250 24.839 310 203 8 159 446 186 487 2.76e-18 87.8
MS.gene062319.t1 MTR_8g063280 21.162 482 328 14 1 445 1 467 2.99e-18 87.8
MS.gene062319.t1 MTR_2g073480 31.034 203 131 4 249 446 183 381 5.06e-18 86.3
MS.gene062319.t1 MTR_7g012330 24.837 459 289 18 16 434 15 457 5.58e-18 86.7
MS.gene062319.t1 MTR_2g072270 24.451 319 216 11 147 446 184 496 5.69e-18 87.0
MS.gene062319.t1 MTR_2g072310 25.633 316 193 12 159 446 23 324 5.71e-18 85.5
MS.gene062319.t1 MTR_2g073440 31.034 203 131 4 249 446 250 448 5.81e-18 86.7
MS.gene062319.t1 MTR_7g055793 24.054 370 246 12 124 468 107 466 6.08e-18 86.7
MS.gene062319.t1 MTR_2g023680 23.871 310 206 8 159 446 190 491 6.17e-18 86.7
MS.gene062319.t1 MTR_7g055793 24.054 370 246 12 124 468 162 521 7.14e-18 86.7
MS.gene062319.t1 MTR_6g042540 22.176 478 299 17 4 427 9 467 7.68e-18 86.7
MS.gene062319.t1 MTR_0181s0030 23.673 490 324 15 5 459 9 483 8.85e-18 86.3
MS.gene062319.t1 MTR_2g065360 22.940 449 310 13 27 449 5 443 9.04e-18 85.9
MS.gene062319.t1 MTR_7g103450 22.360 483 296 17 16 446 30 485 1.04e-17 85.9
MS.gene062319.t1 MTR_5g095290 23.899 477 316 15 4 448 9 470 1.52e-17 85.5
MS.gene062319.t1 MTR_2g072260 24.920 313 203 11 159 448 183 486 1.74e-17 85.5
MS.gene062319.t1 MTR_8g042060 25.287 348 218 10 136 446 119 461 1.88e-17 85.1
MS.gene062319.t1 MTR_2g010320 28.571 217 142 5 241 446 260 474 3.50e-17 84.3
MS.gene062319.t1 MTR_6g008600 23.553 501 290 22 8 442 14 487 3.54e-17 84.3
MS.gene062319.t1 MTR_4g025970 25.149 505 327 18 2 469 1 491 3.69e-17 84.3
MS.gene062319.t1 MTR_5g045770 25.794 504 324 18 2 469 1 490 3.71e-17 84.3
MS.gene062319.t1 MTR_2g010380 24.390 451 292 13 35 446 40 480 4.16e-17 84.3
MS.gene062319.t1 MTR_3g093530 25.667 300 205 6 160 446 203 497 4.36e-17 84.3
MS.gene062319.t1 MTR_1g091023 23.125 480 279 16 18 446 23 463 4.77e-17 84.0
MS.gene062319.t1 MTR_4g077210 29.508 244 156 9 241 473 263 501 4.87e-17 84.0
MS.gene062319.t1 MTR_2g019640 23.963 434 279 15 27 427 38 453 1.10e-16 82.8
MS.gene062319.t1 MTR_1g055325 30.000 210 133 5 242 446 286 486 1.13e-16 82.8
MS.gene062319.t1 MTR_5g095230 23.823 361 236 14 115 446 137 487 1.22e-16 82.8
MS.gene062319.t1 MTR_4g102280 29.386 228 145 7 226 443 255 476 2.06e-16 82.0
MS.gene062319.t1 MTR_5g072980 22.814 469 320 13 29 467 33 489 2.27e-16 82.0
MS.gene062319.t1 MTR_5g072930 22.814 469 320 13 29 467 33 489 2.27e-16 82.0
MS.gene062319.t1 MTR_1g091003 26.724 232 156 5 225 449 242 466 3.30e-16 81.3
MS.gene062319.t1 MTR_4g089020 22.009 468 323 14 6 446 9 461 3.30e-16 81.3
MS.gene062319.t1 MTR_4g113650 24.804 383 253 13 90 446 119 492 3.55e-16 81.3
MS.gene062319.t1 MTR_2g010300 22.316 475 313 12 5 446 9 460 3.63e-16 81.3
MS.gene062319.t1 MTR_0608s0010 23.158 380 262 10 5 370 9 372 3.87e-16 80.1
MS.gene062319.t1 MTR_3g076530 24.843 479 305 22 1 446 15 471 4.94e-16 80.9
MS.gene062319.t1 MTR_1g037370 23.144 458 309 16 18 448 23 464 5.01e-16 80.9
MS.gene062319.t1 MTR_8g466180 23.226 465 297 17 21 446 26 469 5.46e-16 80.9
MS.gene062319.t1 MTR_1g015860 28.736 174 102 5 281 442 332 495 6.32e-16 80.5
MS.gene062319.t1 MTR_0638s0020 22.955 440 272 14 27 446 5 397 7.49e-16 79.7
MS.gene062319.t1 MTR_6g034965 21.814 463 331 14 7 446 13 467 8.67e-16 80.1
MS.gene062319.t1 MTR_5g009110 25.080 311 180 10 177 446 96 394 1.21e-15 79.3
MS.gene062319.t1 MTR_1g091010 28.780 205 132 5 249 446 265 462 1.22e-15 79.7
MS.gene062319.t1 MTR_6g008650 23.260 503 295 21 3 442 11 485 1.29e-15 79.7
MS.gene062319.t1 MTR_6g072490 23.647 351 241 11 115 446 144 486 1.32e-15 79.7
MS.gene062319.t1 MTR_1g101040 24.571 350 239 12 115 446 146 488 1.60e-15 79.3
MS.gene062319.t1 MTR_7g075610 23.629 474 326 12 1 446 6 471 1.76e-15 79.0
MS.gene062319.t1 MTR_5g009110 25.080 311 180 10 177 446 244 542 2.03e-15 79.0
MS.gene062319.t1 MTR_4g025980 23.732 493 319 18 16 469 16 490 2.69e-15 78.6
MS.gene062319.t1 MTR_1g085680 24.009 429 293 13 71 473 97 518 3.20e-15 78.2
MS.gene062319.t1 MTR_3g058400 23.256 473 322 15 4 448 13 472 3.44e-15 78.2
MS.gene062319.t1 MTR_1g062190 25.194 258 176 7 227 471 286 539 3.99e-15 78.2
MS.gene062319.t1 MTR_1g023730 23.158 475 303 20 18 446 21 479 4.02e-15 78.2
MS.gene062319.t1 MTR_3g057980 24.948 477 306 21 2 446 8 464 4.11e-15 77.8
MS.gene062319.t1 MTR_8g036185 26.772 254 164 4 227 461 251 501 4.23e-15 78.2
MS.gene062319.t1 MTR_3g014880 25.328 229 151 8 214 427 252 475 5.38e-15 77.8
MS.gene062319.t1 MTR_4g029690 19.108 314 238 6 1 303 8 316 6.71e-15 75.9
MS.gene062319.t1 MTR_2g073420 28.182 220 149 4 243 457 272 487 8.50e-15 77.0
MS.gene062319.t1 MTR_8g042040 24.444 405 273 12 58 446 93 480 1.11e-14 76.6
MS.gene062319.t1 MTR_4g104570 30.994 171 111 3 280 446 1 168 1.12e-14 73.2
MS.gene062319.t1 MTR_2g450040 23.859 482 305 19 7 442 15 480 1.39e-14 76.3
MS.gene062319.t1 MTR_7g096340 22.030 463 305 16 23 444 24 471 1.75e-14 75.9
MS.gene062319.t1 MTR_4g094775 22.601 469 326 15 4 449 10 464 2.69e-14 75.5
MS.gene062319.t1 MTR_4g133750 23.318 446 305 15 28 446 36 471 2.89e-14 75.5
MS.gene062319.t1 MTR_8g006495 24.107 336 216 11 130 448 32 345 2.93e-14 74.7
MS.gene062319.t1 MTR_4g048580 21.748 469 327 17 6 446 12 468 4.42e-14 74.7
MS.gene062319.t1 MTR_7g012860 24.494 445 284 18 26 434 30 458 7.65e-14 73.9
MS.gene062319.t1 MTR_0287s0060 24.494 445 284 18 26 434 30 458 7.65e-14 73.9
MS.gene062319.t1 MTR_2g061200 23.684 380 255 12 99 446 126 502 7.74e-14 73.9
MS.gene062319.t1 MTR_5g023680 24.306 432 277 16 30 427 6 421 1.13e-13 73.6
MS.gene062319.t1 MTR_3g080580 22.599 354 224 13 138 448 146 492 1.31e-13 73.2
MS.gene062319.t1 MTR_6g008640 23.297 279 182 10 173 423 194 468 2.88e-13 72.4
MS.gene062319.t1 MTR_6g084770 22.811 491 321 22 5 457 12 482 3.18e-13 72.0
MS.gene062319.t1 MTR_3g058110 22.366 465 301 16 21 446 30 473 3.23e-13 72.0
MS.gene062319.t1 MTR_7g079440 26.341 205 134 6 205 400 373 569 3.60e-13 72.0
MS.gene062319.t1 MTR_2g105360 34.416 154 95 3 324 471 345 498 4.32e-13 71.6
MS.gene062319.t1 MTR_7g096320 21.382 463 307 17 24 444 25 472 4.88e-13 71.6
MS.gene062319.t1 MTR_5g094560 20.975 472 329 20 5 446 11 468 1.24e-12 70.1
MS.gene062319.t1 MTR_5g073020 22.042 431 292 14 29 427 33 451 1.93e-12 69.7
MS.gene062319.t1 MTR_8g098565 27.320 194 128 4 265 447 286 477 2.11e-12 69.3
MS.gene062319.t1 MTR_1g035830 22.785 395 241 12 90 447 114 481 2.15e-12 69.3
MS.gene062319.t1 MTR_8g468780 27.074 229 151 6 211 427 163 387 2.53e-12 68.9
MS.gene062319.t1 MTR_6g035115 21.674 466 310 12 19 451 27 470 4.43e-12 68.6
MS.gene062319.t1 MTR_4g088160 22.922 397 266 15 64 427 66 455 4.89e-12 68.6
MS.gene062319.t1 MTR_4g088170 22.912 467 299 17 8 427 5 457 5.16e-12 68.2
MS.gene062319.t1 MTR_5g094540 20.771 467 336 14 5 446 11 468 6.81e-12 67.8
MS.gene062319.t1 MTR_4g088420 27.097 155 102 4 280 427 31 181 6.90e-12 65.9
MS.gene062319.t1 MTR_4g026050 22.222 477 327 16 1 446 1 464 1.28e-11 67.0
MS.gene062319.t1 MTR_2g010280 27.604 192 127 5 265 446 285 474 1.45e-11 67.0
MS.gene062319.t1 MTR_1g035190 23.060 464 296 18 21 446 14 454 1.58e-11 66.6
MS.gene062319.t1 MTR_4g035330 24.686 239 165 6 233 467 240 467 2.64e-11 65.9
MS.gene062319.t1 MTR_1g023700 21.987 473 307 16 20 446 24 480 2.67e-11 66.2
MS.gene062319.t1 MTR_8g104030 26.695 236 156 7 227 449 20 251 3.01e-11 64.7
MS.gene062319.t1 MTR_3g058060 22.561 492 305 22 4 446 8 472 3.07e-11 65.9
MS.gene062319.t1 MTR_5g073320 21.719 442 312 16 29 446 38 469 3.08e-11 65.9
MS.gene062319.t1 MTR_3g058220 22.538 457 309 16 20 446 28 469 3.19e-11 65.9
MS.gene062319.t1 MTR_8g098435 24.430 307 185 10 159 430 168 462 3.33e-11 65.9
MS.gene062319.t1 MTR_3g058380 25.589 297 190 12 175 448 103 391 4.68e-11 65.1
MS.gene062319.t1 MTR_1g035940 22.785 395 241 13 90 447 114 481 5.62e-11 65.1
MS.gene062319.t1 MTR_5g056720 24.569 232 153 6 225 450 186 401 9.72e-11 63.9
MS.gene062319.t1 MTR_8g091680 23.684 456 300 18 2 446 1 419 9.87e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene062319.t1 AT5G36110 37.556 450 267 6 29 471 34 476 4.49e-106 324
MS.gene062319.t1 AT2G42850 34.989 443 280 5 31 471 47 483 4.85e-95 296
MS.gene062319.t1 AT5G45340 30.851 470 303 9 1 468 10 459 1.22e-71 234
MS.gene062319.t1 AT5G45340 31.567 453 288 9 1 451 10 442 4.25e-71 233
MS.gene062319.t1 AT5G36110 35.795 352 215 4 29 375 34 379 4.99e-71 230
MS.gene062319.t1 AT4G19230 31.674 442 284 8 29 469 36 460 2.44e-70 231
MS.gene062319.t1 AT4G19230 32.126 414 264 7 29 442 36 432 7.17e-68 225
MS.gene062319.t1 AT2G32440 29.099 433 299 6 17 445 32 460 9.53e-67 222
MS.gene062319.t1 AT2G32440 29.099 433 299 6 17 445 32 460 9.53e-67 222
MS.gene062319.t1 AT3G13730 30.569 422 278 8 28 442 50 463 4.51e-65 217
MS.gene062319.t1 AT3G13730 30.569 422 278 8 28 442 50 463 1.04e-64 217
MS.gene062319.t1 AT2G42850 33.237 346 226 3 31 375 47 388 7.28e-64 212
MS.gene062319.t1 AT4G36380 29.138 429 298 4 29 453 69 495 7.43e-64 216
MS.gene062319.t1 AT5G05690 31.579 418 275 7 29 443 31 440 8.81e-64 214
MS.gene062319.t1 AT2G29090 29.464 448 297 8 28 470 48 481 3.39e-63 213
MS.gene062319.t1 AT2G29090 29.464 448 297 8 28 470 48 481 3.39e-63 213
MS.gene062319.t1 AT1G05160 28.266 421 296 5 29 445 45 463 6.27e-63 212
MS.gene062319.t1 AT1G05160 28.266 421 296 5 29 445 45 463 6.27e-63 212
MS.gene062319.t1 AT3G19270 27.332 461 321 7 6 464 11 459 9.64e-60 203
MS.gene062319.t1 AT3G50660 30.197 457 280 8 29 450 39 491 1.13e-58 201
MS.gene062319.t1 AT3G19270 27.626 438 304 6 6 442 11 436 5.43e-58 198
MS.gene062319.t1 AT1G19630 28.062 449 315 6 5 450 9 452 7.71e-58 198
MS.gene062319.t1 AT1G19630 28.571 441 307 6 5 442 9 444 8.76e-58 197
MS.gene062319.t1 AT3G30180 27.637 474 325 8 1 470 5 464 1.13e-57 197
MS.gene062319.t1 AT1G12740 23.913 460 341 5 1 456 1 455 1.52e-56 195
MS.gene062319.t1 AT5G36140 32.781 302 192 5 15 311 16 311 2.61e-55 187
MS.gene062319.t1 AT1G12740 23.391 466 341 6 2 456 1 461 5.08e-54 188
MS.gene062319.t1 AT1G12740 23.176 466 342 6 2 456 1 461 1.05e-53 187
MS.gene062319.t1 AT5G38970 26.778 478 328 10 1 470 1 464 3.56e-53 186
MS.gene062319.t1 AT2G29090 29.380 371 247 7 105 470 26 386 1.72e-50 176
MS.gene062319.t1 AT1G19630 28.250 400 281 5 5 401 9 405 8.31e-50 176
MS.gene062319.t1 AT5G05690 29.058 382 262 6 29 409 31 404 2.14e-49 174
MS.gene062319.t1 AT1G73340 24.845 483 337 6 2 471 11 480 2.40e-49 176
MS.gene062319.t1 AT5G14400 25.393 445 300 6 34 473 1 418 2.59e-49 174
MS.gene062319.t1 AT1G55940 25.358 489 340 14 2 474 16 495 5.95e-48 172
MS.gene062319.t1 AT1G55940 25.821 457 314 14 2 442 16 463 2.72e-46 167
MS.gene062319.t1 AT3G50660 29.073 399 255 7 29 403 39 433 2.89e-46 167
MS.gene062319.t1 AT1G65670 27.027 444 299 9 1 438 10 434 8.04e-46 166
MS.gene062319.t1 AT5G14400 25.121 414 278 6 34 442 1 387 1.30e-45 164
MS.gene062319.t1 AT5G38970 27.062 388 271 7 86 470 5 383 5.93e-44 159
MS.gene062319.t1 AT5G38970 27.062 388 271 7 86 470 5 383 5.93e-44 159
MS.gene062319.t1 AT5G05690 31.790 324 210 7 123 443 6 321 1.64e-43 157
MS.gene062319.t1 AT4G15300 27.009 448 298 13 1 438 10 438 4.60e-42 156
MS.gene062319.t1 AT4G15300 27.069 447 297 13 2 438 1 428 4.75e-42 155
MS.gene062319.t1 AT5G38970 25.862 406 283 7 1 400 1 394 1.72e-41 153
MS.gene062319.t1 AT3G44970 26.998 463 311 12 24 472 30 479 2.30e-41 154
MS.gene062319.t1 AT5G48000 26.068 468 315 12 17 469 23 474 5.15e-41 153
MS.gene062319.t1 AT5G48000 26.068 468 315 12 17 469 23 474 5.15e-41 153
MS.gene062319.t1 AT5G48000 26.068 468 315 12 17 469 23 474 5.15e-41 153
MS.gene062319.t1 AT5G48000 26.068 468 315 12 17 469 23 474 5.15e-41 153
MS.gene062319.t1 AT5G48000 26.068 468 315 12 17 469 23 474 5.15e-41 153
MS.gene062319.t1 AT5G48000 26.068 468 315 12 17 469 23 474 5.15e-41 153
MS.gene062319.t1 AT5G48000 26.124 467 314 12 17 468 64 514 1.63e-40 152
MS.gene062319.t1 AT5G14400 25.641 390 258 6 89 473 2 364 5.78e-39 145
MS.gene062319.t1 AT5G36130 43.571 140 76 2 334 471 1 139 5.60e-38 135
MS.gene062319.t1 AT1G78490 23.467 473 349 8 4 469 8 474 6.03e-38 144
MS.gene062319.t1 AT1G12740 22.102 371 280 4 2 368 1 366 3.51e-37 140
MS.gene062319.t1 AT4G15396 23.874 444 317 9 3 438 9 439 2.21e-36 140
MS.gene062319.t1 AT4G15396 23.874 444 317 9 3 438 9 439 2.30e-36 140
MS.gene062319.t1 AT4G36380 25.882 340 248 3 29 366 69 406 1.63e-34 134
MS.gene062319.t1 AT4G15393 24.270 445 312 11 3 438 9 437 4.04e-34 134
MS.gene062319.t1 AT4G15300 25.373 469 299 15 2 438 1 450 4.83e-34 134
MS.gene062319.t1 AT5G14400 24.852 338 241 4 34 366 1 330 6.62e-31 122
MS.gene062319.t1 AT4G15396 22.072 444 304 9 3 438 9 418 1.69e-27 115
MS.gene062319.t1 AT3G30290 25.798 376 259 9 70 438 6 368 8.43e-27 112
MS.gene062319.t1 AT5G67310 24.330 485 314 16 2 455 15 477 1.29e-26 112
MS.gene062319.t1 AT4G15396 22.963 405 293 8 3 401 9 400 1.39e-26 111
MS.gene062319.t1 AT1G78490 22.794 408 303 7 3 404 7 408 1.95e-26 111
MS.gene062319.t1 AT4G15310 23.515 421 306 9 24 438 31 441 4.69e-26 110
MS.gene062319.t1 AT4G15393 23.342 407 289 10 3 402 9 399 6.73e-25 106
MS.gene062319.t1 AT2G45550 25.625 480 304 17 7 446 9 475 1.02e-23 104
MS.gene062319.t1 AT5G25140 24.152 501 334 18 2 473 1 484 1.72e-22 100
MS.gene062319.t1 AT4G37410 23.529 493 331 18 5 468 7 482 2.43e-21 97.1
MS.gene062319.t1 AT4G37330 24.944 445 298 12 5 427 7 437 3.68e-21 96.7
MS.gene062319.t1 AT2G34490 24.213 508 321 18 2 471 11 492 4.52e-21 96.3
MS.gene062319.t1 AT4G12320 23.480 477 312 18 9 446 19 481 9.99e-21 95.5
MS.gene062319.t1 AT4G15393 24.257 404 256 12 3 402 9 366 1.27e-20 93.6
MS.gene062319.t1 AT5G57220 24.359 468 303 20 5 443 6 451 1.70e-20 94.4
MS.gene062319.t1 AT3G48280 23.060 464 331 14 1 446 1 456 3.70e-20 93.6
MS.gene062319.t1 AT2G26170 22.290 489 306 13 7 442 21 488 1.14e-19 92.0
MS.gene062319.t1 AT4G37320 24.838 463 309 14 5 442 7 455 1.31e-19 92.0
MS.gene062319.t1 AT1G50520 25.678 479 302 16 5 443 15 479 1.32e-19 92.0
MS.gene062319.t1 AT2G45570 24.105 419 280 13 60 446 64 476 1.73e-19 91.7
MS.gene062319.t1 AT3G20140 22.523 444 308 15 29 446 42 475 2.82e-19 90.9
MS.gene062319.t1 AT4G37430 23.158 475 316 16 1 442 1 459 3.56e-19 90.5
MS.gene062319.t1 AT5G47990 22.782 417 274 12 63 443 72 476 3.89e-19 90.5
MS.gene062319.t1 AT4G37340 24.353 464 313 18 4 442 5 455 4.05e-19 90.5
MS.gene062319.t1 AT2G26170 28.125 256 158 8 197 442 166 405 5.03e-19 89.7
MS.gene062319.t1 AT5G25180 23.589 496 335 18 6 473 5 484 6.55e-19 89.7
MS.gene062319.t1 AT2G29090 23.158 285 204 5 28 309 48 320 7.68e-19 88.2
MS.gene062319.t1 AT5G25120 22.581 496 339 17 6 473 6 484 8.44e-19 89.4
MS.gene062319.t1 AT2G26710 24.403 377 257 12 90 446 120 488 2.01e-18 88.2
MS.gene062319.t1 AT5G42580 22.113 407 281 12 64 446 70 464 2.16e-18 88.2
MS.gene062319.t1 AT4G13770 23.701 481 317 18 2 446 1 467 3.93e-18 87.4
MS.gene062319.t1 AT1G31800 21.525 446 299 11 37 446 111 541 4.16e-18 87.4
MS.gene062319.t1 AT3G20120 22.998 487 328 14 1 449 4 481 7.01e-18 86.7
MS.gene062319.t1 AT4G37400 23.126 467 315 16 5 443 7 457 7.02e-18 86.7
MS.gene062319.t1 AT3G28740 25.714 385 234 15 87 442 102 463 1.30e-17 85.9
MS.gene062319.t1 AT5G36220 25.159 473 300 19 5 442 8 461 1.79e-17 85.5
MS.gene062319.t1 AT3G53130 22.222 432 287 11 56 453 103 519 1.88e-17 85.5
MS.gene062319.t1 AT5G06900 22.472 445 307 15 5 423 10 442 1.92e-17 85.1
MS.gene062319.t1 AT1G66540 27.039 233 155 7 214 442 62 283 2.00e-17 83.6
MS.gene062319.t1 AT1G33720 22.737 475 323 15 6 446 11 475 2.31e-17 85.1
MS.gene062319.t1 AT2G34500 25.561 446 296 17 2 427 11 440 2.42e-17 84.7
MS.gene062319.t1 AT3G20090 22.453 481 329 11 2 449 14 483 2.51e-17 85.1
MS.gene062319.t1 AT3G20110 24.000 475 319 15 4 449 11 472 2.73e-17 84.7
MS.gene062319.t1 AT1G66540 26.778 239 160 7 208 442 115 342 4.44e-17 83.2
MS.gene062319.t1 AT3G25180 27.570 214 136 8 237 442 267 469 4.58e-17 84.0
MS.gene062319.t1 AT1G64940 28.889 225 145 6 232 445 258 478 4.99e-17 84.0
MS.gene062319.t1 AT3G20100 22.171 433 304 12 43 446 51 479 5.35e-17 84.0
MS.gene062319.t1 AT3G14680 23.762 404 269 14 69 446 95 485 5.68e-17 84.0
MS.gene062319.t1 AT4G15110 26.518 313 173 13 177 446 252 550 6.84e-17 84.0
MS.gene062319.t1 AT1G11680 22.056 467 329 15 1 448 10 460 6.94e-17 83.6
MS.gene062319.t1 AT2G45560 25.156 481 305 19 7 446 9 475 6.98e-17 83.6
MS.gene062319.t1 AT2G28860 23.651 482 304 18 27 471 34 488 8.15e-17 83.2
MS.gene062319.t1 AT4G37370 21.692 461 298 16 4 427 5 439 8.95e-17 83.2
MS.gene062319.t1 AT5G52400 23.143 350 241 13 115 446 153 492 1.16e-16 82.8
MS.gene062319.t1 AT5G24910 26.592 267 175 8 216 468 270 529 1.45e-16 82.8
MS.gene062319.t1 AT4G37360 23.696 460 307 19 11 442 12 455 1.66e-16 82.4
MS.gene062319.t1 AT5G24900 29.064 203 122 7 273 467 210 398 1.75e-16 81.6
MS.gene062319.t1 AT5G04330 23.779 471 280 17 27 446 30 472 2.17e-16 82.0
MS.gene062319.t1 AT4G15330 21.398 472 335 11 5 449 14 476 2.24e-16 82.0
MS.gene062319.t1 AT5G24900 29.353 201 124 6 273 467 327 515 3.45e-16 81.3
MS.gene062319.t1 AT3G26280 24.569 464 274 17 15 427 14 452 4.08e-16 81.3
MS.gene062319.t1 AT3G14630 26.510 298 199 11 163 446 245 536 4.11e-16 81.3
MS.gene062319.t1 AT3G26280 24.569 464 274 17 15 427 31 469 4.79e-16 80.9
MS.gene062319.t1 AT3G14630 26.510 298 199 11 163 446 190 481 4.84e-16 80.9
MS.gene062319.t1 AT4G15350 23.684 418 284 13 63 450 65 477 5.22e-16 80.9
MS.gene062319.t1 AT5G44620 26.582 237 159 8 219 446 252 482 6.88e-16 80.5
MS.gene062319.t1 AT3G61040 30.303 198 127 5 244 433 258 452 8.04e-16 80.1
MS.gene062319.t1 AT4G15360 23.319 476 323 15 5 449 15 479 8.31e-16 80.1
MS.gene062319.t1 AT3G32047 22.458 472 331 12 5 449 16 479 9.14e-16 80.1
MS.gene062319.t1 AT3G14640 25.581 301 199 10 163 446 195 487 9.44e-16 80.1
MS.gene062319.t1 AT3G14640 25.418 299 202 9 163 446 217 509 1.05e-15 80.1
MS.gene062319.t1 AT3G20950 21.978 455 321 11 21 446 34 483 1.16e-15 79.7
MS.gene062319.t1 AT3G14610 24.503 302 209 9 159 446 189 485 1.48e-15 79.3
MS.gene062319.t1 AT3G56630 24.252 301 194 10 169 442 173 466 1.71e-15 79.3
MS.gene062319.t1 AT1G64950 28.000 225 147 6 232 445 257 477 1.91e-15 79.0
MS.gene062319.t1 AT1G33720 25.424 295 193 9 174 446 54 343 1.98e-15 78.2
MS.gene062319.t1 AT1G33720 25.424 295 193 9 174 446 54 343 1.98e-15 78.2
MS.gene062319.t1 AT1G33720 25.424 295 193 9 174 446 54 343 1.98e-15 78.2
MS.gene062319.t1 AT4G13290 23.195 457 302 15 19 446 22 458 2.77e-15 78.6
MS.gene062319.t1 AT3G10570 20.379 422 290 10 56 442 68 478 3.43e-15 78.2
MS.gene062319.t1 AT2G46950 23.377 385 260 11 86 449 176 546 6.15e-15 77.8
MS.gene062319.t1 AT5G24950 22.976 457 303 17 22 446 25 464 9.29e-15 77.0
MS.gene062319.t1 AT4G31500 22.567 483 319 19 2 446 1 466 9.62e-15 77.0
MS.gene062319.t1 AT1G33730 23.810 294 199 7 174 446 50 339 9.79e-15 75.9
MS.gene062319.t1 AT1G33730 23.810 294 199 7 174 446 50 339 9.79e-15 75.9
MS.gene062319.t1 AT3G48300 21.359 412 291 14 63 451 58 459 1.01e-14 76.6
MS.gene062319.t1 AT3G48300 21.359 412 291 14 63 451 60 461 1.02e-14 76.6
MS.gene062319.t1 AT3G20935 26.556 241 145 6 234 446 69 305 1.27e-14 75.5
MS.gene062319.t1 AT3G44970 23.220 323 228 8 24 337 30 341 1.64e-14 75.5
MS.gene062319.t1 AT1G64930 28.293 205 133 5 251 445 278 478 1.88e-14 75.9
MS.gene062319.t1 AT2G12190 27.753 227 147 6 232 445 257 479 2.02e-14 75.9
MS.gene062319.t1 AT1G50560 24.793 484 313 17 5 449 15 486 2.21e-14 75.9
MS.gene062319.t1 AT2G45580 27.442 215 141 7 239 446 116 322 2.40e-14 74.7
MS.gene062319.t1 AT3G26270 28.879 232 144 8 227 446 248 470 2.57e-14 75.5
MS.gene062319.t1 AT3G20960 21.292 418 291 11 63 449 71 481 2.77e-14 75.5
MS.gene062319.t1 AT4G27710 28.821 229 149 7 226 446 268 490 3.09e-14 75.5
MS.gene062319.t1 AT2G45580 27.442 215 141 7 239 446 270 476 3.53e-14 75.1
MS.gene062319.t1 AT2G46960 24.499 449 288 18 55 470 86 516 5.31e-14 74.7
MS.gene062319.t1 AT3G03470 28.497 193 128 4 265 447 288 480 5.70e-14 74.3
MS.gene062319.t1 AT2G46960 25.552 317 207 10 173 470 94 400 5.83e-14 73.9
MS.gene062319.t1 AT5G25130 22.600 500 334 17 6 473 6 484 7.98e-14 73.9
MS.gene062319.t1 AT5G36220 27.197 239 158 8 208 442 89 315 9.07e-14 73.2
MS.gene062319.t1 AT5G38450 26.158 367 234 11 102 443 132 486 1.05e-13 73.6
MS.gene062319.t1 AT5G06905 22.156 501 322 18 10 459 9 492 1.06e-13 73.6
MS.gene062319.t1 AT3G26330 22.756 479 326 13 27 472 29 496 1.25e-13 73.6
MS.gene062319.t1 AT3G20130 21.845 412 290 10 63 446 72 479 1.32e-13 73.2
MS.gene062319.t1 AT1G13110 23.176 466 290 18 6 423 3 448 2.05e-13 72.8
MS.gene062319.t1 AT1G11600 19.672 488 338 14 18 466 24 496 2.73e-13 72.4
MS.gene062319.t1 AT4G15380 24.138 406 276 12 63 442 72 471 2.77e-13 72.4
MS.gene062319.t1 AT1G13090 22.350 434 296 13 21 423 19 442 3.00e-13 72.0
MS.gene062319.t1 AT1G67110 26.611 357 238 9 102 443 133 480 4.46e-13 71.6
MS.gene062319.t1 AT1G28430 22.695 423 291 15 44 435 51 468 4.84e-13 71.6
MS.gene062319.t1 AT2G27010 22.768 448 283 17 63 473 65 486 1.09e-12 70.5
MS.gene062319.t1 AT1G58260 19.959 486 340 15 4 446 11 490 2.54e-12 69.3
MS.gene062319.t1 AT3G44250 24.222 450 268 20 21 423 19 442 4.03e-12 68.6
MS.gene062319.t1 AT5G07990 22.737 475 324 14 4 446 7 470 5.64e-12 68.2
MS.gene062319.t1 AT1G74110 26.728 217 132 8 225 423 279 486 6.00e-12 68.2
MS.gene062319.t1 AT3G26125 24.128 344 216 13 173 473 193 534 7.59e-12 67.8
MS.gene062319.t1 AT1G24540 22.713 317 215 9 161 447 178 494 9.91e-12 67.4
MS.gene062319.t1 AT1G16400 20.518 502 327 17 6 449 13 500 1.18e-11 67.4
MS.gene062319.t1 AT4G36220 25.081 307 193 8 172 446 182 483 1.29e-11 67.0
MS.gene062319.t1 AT2G27000 22.892 415 283 11 63 446 69 477 1.83e-11 66.6
MS.gene062319.t1 AT5G04660 21.791 335 219 10 134 442 160 477 3.37e-11 65.9
MS.gene062319.t1 AT5G23190 21.726 336 227 11 173 474 210 543 4.14e-11 65.5
MS.gene062319.t1 AT1G33720 23.750 320 192 11 174 446 54 368 4.54e-11 65.1
MS.gene062319.t1 AT3G48290 21.429 406 288 14 63 446 62 458 4.75e-11 65.1
MS.gene062319.t1 AT1G11610 27.586 261 162 10 217 467 234 477 6.49e-11 64.7
MS.gene062319.t1 AT2G46660 26.768 198 119 7 241 423 290 476 7.09e-11 64.7
MS.gene062319.t1 AT1G11610 27.586 261 162 10 217 467 234 477 7.24e-11 64.7
MS.gene062319.t1 AT3G20090 25.424 236 160 5 224 449 116 345 7.56e-11 64.3
MS.gene062319.t1 AT2G44890 22.876 306 198 8 169 451 177 467 8.50e-11 64.3
MS.gene062319.t1 AT4G15330 24.893 233 161 5 227 449 220 448 9.55e-11 64.3

Find 121 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCATTTCAATCAATAATTA+AGG 0.150288 5.1:-73695313 MS.gene062319:CDS
TCACTTGGAATTCCCATTAT+TGG 0.200724 5.1:-73696234 MS.gene062319:CDS
ATTTCAAAGCTGAGTCTATT+TGG 0.208683 5.1:-73696129 MS.gene062319:CDS
CCCTATTGCTTTGTTCCATT+TGG 0.221258 5.1:-73694206 MS.gene062319:CDS
CGATTTCCTTTAACATGTTT+TGG 0.222920 5.1:+73695220 None:intergenic
ATATGTGCAGCTGTTCTTAA+AGG 0.254244 5.1:-73694988 MS.gene062319:intron
GGATCAAACTGTGAAGGTTC+TGG 0.277530 5.1:+73694260 None:intergenic
TCTCGTATTCAACTTTCTTC+TGG 0.279210 5.1:+73695193 None:intergenic
GCCAAGACTTTGACCAATAA+TGG 0.291356 5.1:+73696221 None:intergenic
AATCAGTAGCTTGCTTAGTA+TGG 0.297529 5.1:-73695142 MS.gene062319:CDS
TTCATTTACCTGCCACCCTT+TGG 0.299628 5.1:+73694398 None:intergenic
AATAGACTCAGCTTTGAAAT+AGG 0.313311 5.1:+73696132 None:intergenic
CCCTTAATTATTGATTGAAA+TGG 0.322436 5.1:+73695312 None:intergenic
TCATTTACCTGCCACCCTTT+GGG 0.336801 5.1:+73694399 None:intergenic
TTCTAATCACTTTCATTATC+CGG 0.339903 5.1:-73695032 MS.gene062319:CDS
AAGGATCCAAAACATGTTAA+AGG 0.340489 5.1:-73695226 MS.gene062319:CDS
GATTAAGTCTTGGCGGGAAT+TGG 0.341640 5.1:+73695161 None:intergenic
CCATGACAAGCATAGCATTA+TGG 0.342858 5.1:+73695079 None:intergenic
TGAAAGTGAGAGTCTTCATT+AGG 0.347580 5.1:+73695397 None:intergenic
CAGTCAATTAAGATGATATT+AGG 0.348659 5.1:-73696021 MS.gene062319:CDS
AAGTAGCTTACAACTGAATT+TGG 0.352974 5.1:+73694109 None:intergenic
ACTACAACAGATATTGAATA+TGG 0.357661 5.1:-73694435 MS.gene062319:CDS
TGTGTAAAGGGTGCATTAAT+TGG 0.358712 5.1:+73695276 None:intergenic
TGAACCTGGAGGGACCCTTT+TGG 0.363172 5.1:+73696254 None:intergenic
TATTGCTTTGTTCCATTTGG+AGG 0.372232 5.1:-73694203 MS.gene062319:CDS
GAAAGTGAGAGTCTTCATTA+GGG 0.375121 5.1:+73695398 None:intergenic
TCTTAATTGACTGTGTTTGC+TGG 0.376593 5.1:+73696031 None:intergenic
GTAAAATTGATGAAGAAGTT+AGG 0.382161 5.1:-73695900 MS.gene062319:CDS
ATAATTTGTTCTCTACTGTT+TGG 0.388428 5.1:-73695372 MS.gene062319:CDS
CACTTTCATTATCCGGCTCT+TGG 0.392385 5.1:-73695025 MS.gene062319:CDS
GCTATGCTTGTCATGGTTGC+AGG 0.394164 5.1:-73695072 MS.gene062319:CDS
CCTTGACTTGGTGTTGGCAT+TGG 0.399805 5.1:+73694062 None:intergenic
CCCATTATTGGTCAAAGTCT+TGG 0.402311 5.1:-73696222 MS.gene062319:CDS
AAGACTCTGGCTTCAAGAAC+GGG 0.416106 5.1:+73695938 None:intergenic
GATCAAACTGTGAAGGTTCT+GGG 0.417095 5.1:+73694261 None:intergenic
TCCAAATGGAACAAAGCAAT+AGG 0.421660 5.1:+73694205 None:intergenic
GAAGACAGAATCAACAAGTA+TGG 0.428167 5.1:-73696156 MS.gene062319:CDS
AGAGAACTGGAATGAGTAAG+AGG 0.433239 5.1:+73696301 None:intergenic
GATAGCTAAAGGCAAGCTCT+TGG 0.437620 5.1:-73694562 MS.gene062319:CDS
GAGAGCTAAGATAGTTTCCT+TGG 0.437949 5.1:+73694020 None:intergenic
CCATTTCAATCAATAATTAA+GGG 0.443637 5.1:-73695312 MS.gene062319:CDS
GTTTGCTAGGGTTGAAACTC+TGG 0.444311 5.1:-73694153 MS.gene062319:CDS
CCAAGACTTTGACCAATAAT+GGG 0.446353 5.1:+73696222 None:intergenic
TTTCAGACAATTCTTTCAGC+AGG 0.447243 5.1:-73694088 MS.gene062319:CDS
TTTCAAAGATGAAGTATACT+TGG 0.454805 5.1:-73694515 MS.gene062319:CDS
AAAGAACCAAACCATCCAAA+AGG 0.460934 5.1:-73696269 MS.gene062319:CDS
AACAATATTCTCATCGCGAT+TGG 0.464065 5.1:+73696056 None:intergenic
TGCTTTGTTCCATTTGGAGG+GGG 0.465672 5.1:-73694200 MS.gene062319:CDS
ATTGCTTTGTTCCATTTGGA+GGG 0.470980 5.1:-73694202 MS.gene062319:CDS
ATAGCTAAAGGCAAGCTCTT+GGG 0.475372 5.1:-73694561 MS.gene062319:CDS
GGAGGCACATTCAGATGCAT+TGG 0.476070 5.1:-73695879 MS.gene062319:CDS
GTGTAAAGGGTGCATTAATT+GGG 0.486122 5.1:+73695277 None:intergenic
AATAGGGTGGGGTAGATGCC+AGG 0.491827 5.1:+73694222 None:intergenic
AGGGTCCCTCCAGGTTCACT+TGG 0.493375 5.1:-73696249 MS.gene062319:CDS
ACCCTAGCAAACTCATATCC+TGG 0.493624 5.1:+73694164 None:intergenic
TTGCACTCTCCTTGAGGCTG+CGG 0.494896 5.1:+73695247 None:intergenic
CATTATACCCAAAGGGTGGC+AGG 0.498119 5.1:-73694406 MS.gene062319:intron
GTCCAGGATATGAGTTTGCT+AGG 0.499490 5.1:-73694166 MS.gene062319:CDS
GAGGCACATTCAGATGCATT+GGG 0.503281 5.1:-73695878 MS.gene062319:CDS
AGAACAGCTGCACATATAGC+TGG 0.505191 5.1:+73694994 None:intergenic
ATGGGAATTCCAAGTGAACC+TGG 0.508975 5.1:+73696240 None:intergenic
TTGCTTAGTATGGTTGAAGA+TGG 0.509580 5.1:-73695132 MS.gene062319:CDS
CCAAATGGAACAAAGCAATA+GGG 0.510553 5.1:+73694206 None:intergenic
TTCAGACAATTCTTTCAGCA+GGG 0.522736 5.1:-73694087 MS.gene062319:CDS
AAAGACTCTGGCTTCAAGAA+CGG 0.523087 5.1:+73695937 None:intergenic
AAGAAGAACACTAGCCATCA+TGG 0.530283 5.1:+73696332 None:intergenic
AAGAACCAAACCATCCAAAA+GGG 0.531049 5.1:-73696268 MS.gene062319:CDS
GTGGATACATTATACCCAAA+GGG 0.533054 5.1:-73694413 MS.gene062319:CDS
TCCAAGTAGATTTGAAAACC+TGG 0.533843 5.1:-73694240 MS.gene062319:CDS
GATAATGAAAGTGATTAGAA+TGG 0.534231 5.1:+73695035 None:intergenic
ACATATTGCTTCAAAGACTC+TGG 0.534467 5.1:+73695925 None:intergenic
CTACTGTTTGGTCTTGAGCG+TGG 0.535265 5.1:-73695360 MS.gene062319:CDS
TTAAGATGATATTAGGCGAC+AGG 0.535591 5.1:-73696014 MS.gene062319:CDS
CTGCGGTTGTAGTGTGTAAA+GGG 0.540198 5.1:+73695264 None:intergenic
GCAAGCTACTGATTAAGTCT+TGG 0.541480 5.1:+73695151 None:intergenic
GCTGCGGTTGTAGTGTGTAA+AGG 0.544877 5.1:+73695263 None:intergenic
AGAGCTAAGATAGTTTCCTT+GGG 0.546492 5.1:+73694021 None:intergenic
TCCAGGATATGAGTTTGCTA+GGG 0.548383 5.1:-73694165 MS.gene062319:CDS
TTTCTGAATCCACCAAAGAT+GGG 0.552226 5.1:+73694459 None:intergenic
AGCTACTGATTAAGTCTTGG+CGG 0.552797 5.1:+73695154 None:intergenic
CCATCCAAAAGGGTCCCTCC+AGG 0.555753 5.1:-73696258 MS.gene062319:CDS
GCTACTGATTAAGTCTTGGC+GGG 0.557526 5.1:+73695155 None:intergenic
AATCAATAATTAAGGGAATG+TGG 0.560339 5.1:-73695305 MS.gene062319:CDS
TTGGGCAAAGTTCAATCAGT+AGG 0.560761 5.1:+73694039 None:intergenic
AAGTATACTTCATCTTTGAA+AGG 0.563144 5.1:+73694517 None:intergenic
CACATTCAGATGCATTGGGA+AGG 0.563148 5.1:-73695874 MS.gene062319:CDS
AAAGATCATAGTAGAGTCAG+AGG 0.566930 5.1:-73695970 MS.gene062319:CDS
GAACAGGAAGAGATAGCTAA+AGG 0.567417 5.1:-73694573 MS.gene062319:CDS
GGATCCTTGCACTCTCCTTG+AGG 0.567712 5.1:+73695241 None:intergenic
TCAATCAGTAGGCCTTGACT+TGG 0.569123 5.1:+73694050 None:intergenic
CTGGTTCATTAGCCAAGAGC+CGG 0.570121 5.1:+73695013 None:intergenic
TTGCTTTGTTCCATTTGGAG+GGG 0.575275 5.1:-73694201 MS.gene062319:CDS
GTATACTTGGAGAGTAGCAA+TGG 0.576473 5.1:-73694502 MS.gene062319:CDS
AGTAGGCCTTGACTTGGTGT+TGG 0.577020 5.1:+73694056 None:intergenic
CTACTTGGATCAAACTGTGA+AGG 0.583030 5.1:+73694254 None:intergenic
CCATAATGCTATGCTTGTCA+TGG 0.584435 5.1:-73695079 MS.gene062319:CDS
TGGCGCGCATAGCACGAAGA+AGG 0.584948 5.1:+73696199 None:intergenic
TACAACTGAATTTGGTCACA+AGG 0.589571 5.1:+73694117 None:intergenic
ATGGAACAAAGCAATAGGGT+GGG 0.590236 5.1:+73694210 None:intergenic
ACACTACAACCGCAGCCTCA+AGG 0.596576 5.1:-73695256 MS.gene062319:CDS
TACTGATTGAACTTTGCCCA+AGG 0.603194 5.1:-73694037 MS.gene062319:CDS
TGCTAGGGTTGAAACTCTGG+TGG 0.603607 5.1:-73694150 MS.gene062319:CDS
ACATTCAGATGCATTGGGAA+GGG 0.609178 5.1:-73695873 MS.gene062319:CDS
TGTCCATGAATCAAAACAGT+TGG 0.610102 5.1:+73696102 None:intergenic
GGAAGGGAAACAGCAGCTCA+AGG 0.612285 5.1:-73695857 MS.gene062319:intron
AATGGAACAAAGCAATAGGG+TGG 0.612767 5.1:+73694209 None:intergenic
GGTGGATACATTATACCCAA+AGG 0.613475 5.1:-73694414 MS.gene062319:CDS
ACAACAGATATTGAATATGG+TGG 0.615515 5.1:-73694432 MS.gene062319:CDS
CTTGGGAGAGACTCTAACAT+GGG 0.619914 5.1:-73694544 MS.gene062319:CDS
GAGTCTTTGAAGCAATATGT+TGG 0.626184 5.1:-73695922 MS.gene062319:CDS
GCAGCCTCAAGGAGAGTGCA+AGG 0.626274 5.1:-73695245 MS.gene062319:CDS
TAGCAATGGAAACTCTGAGA+AGG 0.628710 5.1:-73694488 MS.gene062319:CDS
GGTTACATCAATGACTCACA+TGG 0.634614 5.1:-73694297 MS.gene062319:CDS
TGGAACAAAGCAATAGGGTG+GGG 0.639436 5.1:+73694211 None:intergenic
TCTTGGGAGAGACTCTAACA+TGG 0.644772 5.1:-73694545 MS.gene062319:CDS
GAATTCCAAGTGAACCTGGA+GGG 0.647416 5.1:+73696244 None:intergenic
CCAATGCCAACACCAAGTCA+AGG 0.656183 5.1:-73694062 MS.gene062319:CDS
AAATTGATGAAGAAGTTAGG+AGG 0.660620 5.1:-73695897 MS.gene062319:CDS
AAAGTGAGAGTCTTCATTAG+GGG 0.663881 5.1:+73695399 None:intergenic
GATACATTATACCCAAAGGG+TGG 0.706221 5.1:-73694410 MS.gene062319:CDS
GGAATTCCAAGTGAACCTGG+AGG 0.730756 5.1:+73696243 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTTTTTTTCTGAT+AGG - chr5.1:73694928-73694947 MS.gene062319:intron 10.0%
!! AGAAAACGAAAAAAATTTAG+GGG - chr5.1:73695519-73695538 MS.gene062319:intron 20.0%
!! AGAGAAAACGAAAAAAATTT+AGG - chr5.1:73695517-73695536 MS.gene062319:intron 20.0%
!! CAAAAGCTAATAAAAATACA+TGG - chr5.1:73694547-73694566 MS.gene062319:CDS 20.0%
!! CCATTTCAATCAATAATTAA+GGG - chr5.1:73695043-73695062 MS.gene062319:CDS 20.0%
!! GAGAAAACGAAAAAAATTTA+GGG - chr5.1:73695518-73695537 MS.gene062319:intron 20.0%
!! TATGTTAATGTGTATTTACT+TGG + chr5.1:73694672-73694691 None:intergenic 20.0%
!! TCCATTTCAATCAATAATTA+AGG - chr5.1:73695042-73695061 MS.gene062319:CDS 20.0%
!!! ACTTGATTACATATTCTTTT+TGG - chr5.1:73694866-73694885 MS.gene062319:intron 20.0%
!!! CTTGATTACATATTCTTTTT+GGG - chr5.1:73694867-73694886 MS.gene062319:intron 20.0%
!!! TGTCTTTTTATAGATCTTTT+GGG - chr5.1:73696037-73696056 MS.gene062319:CDS 20.0%
!!! TTGTCTTTTTATAGATCTTT+TGG - chr5.1:73696036-73696055 MS.gene062319:CDS 20.0%
! AAAAAATTTAGGGGATGTAA+AGG - chr5.1:73695528-73695547 MS.gene062319:intron 25.0%
! AAAGTTGAATACGAGAAAAA+TGG - chr5.1:73695169-73695188 MS.gene062319:CDS 25.0%
! AAGTATACTTCATCTTTGAA+AGG + chr5.1:73695841-73695860 None:intergenic 25.0%
! AATCAATAATTAAGGGAATG+TGG - chr5.1:73695050-73695069 MS.gene062319:CDS 25.0%
! ACTACAACAGATATTGAATA+TGG - chr5.1:73695920-73695939 MS.gene062319:CDS 25.0%
! AGTAGTATTAAGTTACTTGA+TGG - chr5.1:73694806-73694825 MS.gene062319:intron 25.0%
! ATCGAGAATACTTAAAATGA+AGG - chr5.1:73695724-73695743 MS.gene062319:intron 25.0%
! ATGACTTGATTTACTTGAAT+AGG - chr5.1:73694775-73694794 MS.gene062319:intron 25.0%
! CAGTCAATTAAGATGATATT+AGG - chr5.1:73694334-73694353 MS.gene062319:intron 25.0%
! GATAATGAAAGTGATTAGAA+TGG + chr5.1:73695323-73695342 None:intergenic 25.0%
! GTAAAATTGATGAAGAAGTT+AGG - chr5.1:73694455-73694474 MS.gene062319:CDS 25.0%
! GTAGTATTAAGTTACTTGAT+GGG - chr5.1:73694807-73694826 MS.gene062319:intron 25.0%
! TAAGAAATGAAAACTGAAGT+AGG - chr5.1:73694891-73694910 MS.gene062319:intron 25.0%
! TACAATACTAGTACAGATAT+AGG - chr5.1:73694621-73694640 MS.gene062319:intron 25.0%
! TTCTAATCACTTTCATTATC+CGG - chr5.1:73695323-73695342 MS.gene062319:CDS 25.0%
! TTTCAAAGATGAAGTATACT+TGG - chr5.1:73695840-73695859 MS.gene062319:intron 25.0%
!! CCCTTAATTATTGATTGAAA+TGG + chr5.1:73695046-73695065 None:intergenic 25.0%
!!! ATAATTTGTTCTCTACTGTT+TGG - chr5.1:73694983-73695002 MS.gene062319:intron 25.0%
AAATGAAGGCAAAGAAATCT+TGG - chr5.1:73695738-73695757 MS.gene062319:intron 30.0%
AAATTGATGAAGAAGTTAGG+AGG - chr5.1:73694458-73694477 MS.gene062319:CDS 30.0%
AAGGATCCAAAACATGTTAA+AGG - chr5.1:73695129-73695148 MS.gene062319:CDS 30.0%
AAGTAGCTTACAACTGAATT+TGG + chr5.1:73696249-73696268 None:intergenic 30.0%
ACAACAGATATTGAATATGG+TGG - chr5.1:73695923-73695942 MS.gene062319:CDS 30.0%
ATTTCAAAGCTGAGTCTATT+TGG - chr5.1:73694226-73694245 MS.gene062319:CDS 30.0%
TTGTATGTCTCTCCTAAATT+TGG + chr5.1:73695573-73695592 None:intergenic 30.0%
! AAATACATGGTGTTAACTTG+TGG - chr5.1:73694560-73694579 MS.gene062319:CDS 30.0%
! CGATTTCCTTTAACATGTTT+TGG + chr5.1:73695138-73695157 None:intergenic 30.0%
! GATTTTTATGATTGCAGAAC+AGG - chr5.1:73695766-73695785 MS.gene062319:intron 30.0%
!! AATAGACTCAGCTTTGAAAT+AGG + chr5.1:73694226-73694245 None:intergenic 30.0%
!! GTTAACTTGTGGTAATCTAT+AGG - chr5.1:73694571-73694590 MS.gene062319:CDS 30.0%
!! TTGGTCATTTTAGAGAAATC+CGG + chr5.1:73694653-73694672 None:intergenic 30.0%
AAAGAACCAAACCATCCAAA+AGG - chr5.1:73694086-73694105 MS.gene062319:CDS 35.0%
AAAGATCATAGTAGAGTCAG+AGG - chr5.1:73694385-73694404 MS.gene062319:intron 35.0%
AAAGTGAGAGTCTTCATTAG+GGG + chr5.1:73694959-73694978 None:intergenic 35.0%
AAATTTAGGGGATGTAAAGG+AGG - chr5.1:73695531-73695550 MS.gene062319:intron 35.0%
AACAATATTCTCATCGCGAT+TGG + chr5.1:73694302-73694321 None:intergenic 35.0%
AAGAACCAAACCATCCAAAA+GGG - chr5.1:73694087-73694106 MS.gene062319:CDS 35.0%
ACAGAAGGAAAAATTAGGGT+GGG - chr5.1:73695478-73695497 MS.gene062319:intron 35.0%
ACATATTGCTTCAAAGACTC+TGG + chr5.1:73694433-73694452 None:intergenic 35.0%
AGCCTACAGAAGGAAAAATT+AGG - chr5.1:73695473-73695492 MS.gene062319:intron 35.0%
ATACTAGTACAGATATAGGC+AGG - chr5.1:73694625-73694644 MS.gene062319:intron 35.0%
ATATGTGCAGCTGTTCTTAA+AGG - chr5.1:73695367-73695386 MS.gene062319:CDS 35.0%
CCAAATGGAACAAAGCAATA+GGG + chr5.1:73696152-73696171 None:intergenic 35.0%
CCAAGACTTTGACCAATAAT+GGG + chr5.1:73694136-73694155 None:intergenic 35.0%
CTTGTGGTAATCTATAGGAT+CGG - chr5.1:73694576-73694595 MS.gene062319:intron 35.0%
GAAAGTGAGAGTCTTCATTA+GGG + chr5.1:73694960-73694979 None:intergenic 35.0%
GAAGACAGAATCAACAAGTA+TGG - chr5.1:73694199-73694218 MS.gene062319:CDS 35.0%
GCCTACAGAAGGAAAAATTA+GGG - chr5.1:73695474-73695493 MS.gene062319:intron 35.0%
GTGGATACATTATACCCAAA+GGG - chr5.1:73695942-73695961 MS.gene062319:CDS 35.0%
TACAACTGAATTTGGTCACA+AGG + chr5.1:73696241-73696260 None:intergenic 35.0%
TACAGAAGGAAAAATTAGGG+TGG - chr5.1:73695477-73695496 MS.gene062319:intron 35.0%
TACTAGTACAGATATAGGCA+GGG - chr5.1:73694626-73694645 MS.gene062319:intron 35.0%
TCACTTGGAATTCCCATTAT+TGG - chr5.1:73694121-73694140 MS.gene062319:CDS 35.0%
TCCAAATGGAACAAAGCAAT+AGG + chr5.1:73696153-73696172 None:intergenic 35.0%
TCCAAGTAGATTTGAAAACC+TGG - chr5.1:73696115-73696134 MS.gene062319:CDS 35.0%
TCTCGTATTCAACTTTCTTC+TGG + chr5.1:73695165-73695184 None:intergenic 35.0%
TCTTAATTGACTGTGTTTGC+TGG + chr5.1:73694327-73694346 None:intergenic 35.0%
TCTTGCAAAATCTCAACTGT+CGG - chr5.1:73695624-73695643 MS.gene062319:intron 35.0%
TGAAAGTGAGAGTCTTCATT+AGG + chr5.1:73694961-73694980 None:intergenic 35.0%
TGTCCATGAATCAAAACAGT+TGG + chr5.1:73694256-73694275 None:intergenic 35.0%
TTAAGATGATATTAGGCGAC+AGG - chr5.1:73694341-73694360 MS.gene062319:intron 35.0%
TTCAGACAATTCTTTCAGCA+GGG - chr5.1:73696268-73696287 MS.gene062319:CDS 35.0%
TTGCTTAGTATGGTTGAAGA+TGG - chr5.1:73695223-73695242 MS.gene062319:CDS 35.0%
TTTAGGAGAGACATACAAAC+AGG - chr5.1:73695575-73695594 MS.gene062319:intron 35.0%
TTTCAGACAATTCTTTCAGC+AGG - chr5.1:73696267-73696286 MS.gene062319:CDS 35.0%
TTTCTGAATCCACCAAAGAT+GGG + chr5.1:73695899-73695918 None:intergenic 35.0%
! ACCCTAATTTTTCCTTCTGT+AGG + chr5.1:73695478-73695497 None:intergenic 35.0%
! ATTGCTTTGTTCCATTTGGA+GGG - chr5.1:73696153-73696172 MS.gene062319:CDS 35.0%
! GTGTAAAGGGTGCATTAATT+GGG + chr5.1:73695081-73695100 None:intergenic 35.0%
! TATTGCTTTGTTCCATTTGG+AGG - chr5.1:73696152-73696171 MS.gene062319:CDS 35.0%
! TGTGTAAAGGGTGCATTAAT+TGG + chr5.1:73695082-73695101 None:intergenic 35.0%
! TTTTCTGAATCCACCAAAGA+TGG + chr5.1:73695900-73695919 None:intergenic 35.0%
!! AATCAGTAGCTTGCTTAGTA+TGG - chr5.1:73695213-73695232 MS.gene062319:CDS 35.0%
!! CTTTTTAGCAGAAAGAGAAC+TGG + chr5.1:73694070-73694089 None:intergenic 35.0%
!! GAGTCTTTGAAGCAATATGT+TGG - chr5.1:73694433-73694452 MS.gene062319:CDS 35.0%
!!! AACTGTTTTGATTCATGGAC+AGG - chr5.1:73694255-73694274 MS.gene062319:CDS 35.0%
!!! ACACCAACTGTTTTGATTCA+TGG - chr5.1:73694250-73694269 MS.gene062319:CDS 35.0%
AATGGAACAAAGCAATAGGG+TGG + chr5.1:73696149-73696168 None:intergenic 40.0%
ACATTCAGATGCATTGGGAA+GGG - chr5.1:73694482-73694501 MS.gene062319:CDS 40.0%
ACTAGTACAGATATAGGCAG+GGG - chr5.1:73694627-73694646 MS.gene062319:intron 40.0%
AGACAGAGATCTGATTCAGA+GGG - chr5.1:73694749-73694768 MS.gene062319:intron 40.0%
AGAGAACTGGAATGAGTAAG+AGG + chr5.1:73694057-73694076 None:intergenic 40.0%
ATAGCTAAAGGCAAGCTCTT+GGG - chr5.1:73695794-73695813 MS.gene062319:intron 40.0%
ATGGAACAAAGCAATAGGGT+GGG + chr5.1:73696148-73696167 None:intergenic 40.0%
ATGTAAAGGAGGCTGTATTG+CGG - chr5.1:73695542-73695561 MS.gene062319:intron 40.0%
ATTGCGGAGGATCCAAATTT+AGG - chr5.1:73695558-73695577 MS.gene062319:intron 40.0%
CCATAATGCTATGCTTGTCA+TGG - chr5.1:73695276-73695295 MS.gene062319:CDS 40.0%
CCATGACAAGCATAGCATTA+TGG + chr5.1:73695279-73695298 None:intergenic 40.0%
CCCATTATTGGTCAAAGTCT+TGG - chr5.1:73694133-73694152 MS.gene062319:CDS 40.0%
CTACTTGGATCAAACTGTGA+AGG + chr5.1:73696104-73696123 None:intergenic 40.0%
GAACAGGAAGAGATAGCTAA+AGG - chr5.1:73695782-73695801 MS.gene062319:intron 40.0%
GATACATTATACCCAAAGGG+TGG - chr5.1:73695945-73695964 MS.gene062319:CDS 40.0%
GATCAAACTGTGAAGGTTCT+GGG + chr5.1:73696097-73696116 None:intergenic 40.0%
GCCAAGACTTTGACCAATAA+TGG + chr5.1:73694137-73694156 None:intergenic 40.0%
GGTGGATACATTATACCCAA+AGG - chr5.1:73695941-73695960 MS.gene062319:CDS 40.0%
GGTTACATCAATGACTCACA+TGG - chr5.1:73696058-73696077 MS.gene062319:CDS 40.0%
GTATACTTGGAGAGTAGCAA+TGG - chr5.1:73695853-73695872 MS.gene062319:intron 40.0%
TAGACAGAGATCTGATTCAG+AGG - chr5.1:73694748-73694767 MS.gene062319:intron 40.0%
TCTATAGGATCGGATCTATC+TGG - chr5.1:73694586-73694605 MS.gene062319:intron 40.0%
TTGGGCAAAGTTCAATCAGT+AGG + chr5.1:73696319-73696338 None:intergenic 40.0%
! AAAGACTCTGGCTTCAAGAA+CGG + chr5.1:73694421-73694440 None:intergenic 40.0%
! AGAAGGTTTTCTCCCATCTT+TGG - chr5.1:73695884-73695903 MS.gene062319:CDS 40.0%
! AGCTACTGATTAAGTCTTGG+CGG + chr5.1:73695204-73695223 None:intergenic 40.0%
! CCCTATTGCTTTGTTCCATT+TGG - chr5.1:73696149-73696168 MS.gene062319:CDS 40.0%
! GCAAGCTACTGATTAAGTCT+TGG + chr5.1:73695207-73695226 None:intergenic 40.0%
! GCCAGGTTTTCAAATCTACT+TGG + chr5.1:73696119-73696138 None:intergenic 40.0%
! TACTGATTGAACTTTGCCCA+AGG - chr5.1:73696318-73696337 MS.gene062319:CDS 40.0%
! TAGCAATGGAAACTCTGAGA+AGG - chr5.1:73695867-73695886 MS.gene062319:CDS 40.0%
! TTGCTTTGTTCCATTTGGAG+GGG - chr5.1:73696154-73696173 MS.gene062319:CDS 40.0%
!! AACTGTCGGATTAGTCTAGA+GGG - chr5.1:73695638-73695657 MS.gene062319:intron 40.0%
!! TCCAGGATATGAGTTTGCTA+GGG - chr5.1:73696190-73696209 MS.gene062319:CDS 40.0%
ACCCTAGCAAACTCATATCC+TGG + chr5.1:73696194-73696213 None:intergenic 45.0%
AGAACAGCTGCACATATAGC+TGG + chr5.1:73695364-73695383 None:intergenic 45.0%
ATGGGAATTCCAAGTGAACC+TGG + chr5.1:73694118-73694137 None:intergenic 45.0%
CACATTCAGATGCATTGGGA+AGG - chr5.1:73694481-73694500 MS.gene062319:CDS 45.0%
CACTTTCATTATCCGGCTCT+TGG - chr5.1:73695330-73695349 MS.gene062319:CDS 45.0%
CTGCGGTTGTAGTGTGTAAA+GGG + chr5.1:73695094-73695113 None:intergenic 45.0%
CTTGGGAGAGACTCTAACAT+GGG - chr5.1:73695811-73695830 MS.gene062319:intron 45.0%
GAAGGAAAAATTAGGGTGGG+AGG - chr5.1:73695481-73695500 MS.gene062319:intron 45.0%
GAATTCCAAGTGAACCTGGA+GGG + chr5.1:73694114-73694133 None:intergenic 45.0%
GAGGCACATTCAGATGCATT+GGG - chr5.1:73694477-73694496 MS.gene062319:CDS 45.0%
GATAGCTAAAGGCAAGCTCT+TGG - chr5.1:73695793-73695812 MS.gene062319:intron 45.0%
GATTAAGTCTTGGCGGGAAT+TGG + chr5.1:73695197-73695216 None:intergenic 45.0%
GGATCAAACTGTGAAGGTTC+TGG + chr5.1:73696098-73696117 None:intergenic 45.0%
TCAATCAGTAGGCCTTGACT+TGG + chr5.1:73696308-73696327 None:intergenic 45.0%
TCATTTACCTGCCACCCTTT+GGG + chr5.1:73695959-73695978 None:intergenic 45.0%
TCTTGGGAGAGACTCTAACA+TGG - chr5.1:73695810-73695829 MS.gene062319:intron 45.0%
TGGAACAAAGCAATAGGGTG+GGG + chr5.1:73696147-73696166 None:intergenic 45.0%
TGTAGGCTGCATGGAAAAAG+AGG + chr5.1:73695461-73695480 None:intergenic 45.0%
TTCATTTACCTGCCACCCTT+TGG + chr5.1:73695960-73695979 None:intergenic 45.0%
! AAGACTCTGGCTTCAAGAAC+GGG + chr5.1:73694420-73694439 None:intergenic 45.0%
! AGACATACAAACAGGCGTTG+AGG - chr5.1:73695583-73695602 MS.gene062319:intron 45.0%
! AGGTTTTCTCCCATCTTTGG+TGG - chr5.1:73695887-73695906 MS.gene062319:CDS 45.0%
! GCTACTGATTAAGTCTTGGC+GGG + chr5.1:73695203-73695222 None:intergenic 45.0%
! GTCCAGGATATGAGTTTGCT+AGG - chr5.1:73696189-73696208 MS.gene062319:CDS 45.0%
! GTTTGCTAGGGTTGAAACTC+TGG - chr5.1:73696202-73696221 MS.gene062319:CDS 45.0%
! TGCTTTGTTCCATTTGGAGG+GGG - chr5.1:73696155-73696174 MS.gene062319:CDS 45.0%
! TTTTCCATGCAGCCTACAGA+AGG - chr5.1:73695463-73695482 MS.gene062319:intron 45.0%
! TTTTCCTTCTGTAGGCTGCA+TGG + chr5.1:73695470-73695489 None:intergenic 45.0%
!! ACTGTCGGATTAGTCTAGAG+GGG - chr5.1:73695639-73695658 MS.gene062319:intron 45.0%
!! CAACTGTCGGATTAGTCTAG+AGG - chr5.1:73695637-73695656 MS.gene062319:intron 45.0%
!! GACATACAAACAGGCGTTGA+GGG - chr5.1:73695584-73695603 MS.gene062319:intron 45.0%
!! GATCTATCTGGTATCGACAC+GGG - chr5.1:73694598-73694617 MS.gene062319:intron 45.0%
!! GGATCTATCTGGTATCGACA+CGG - chr5.1:73694597-73694616 MS.gene062319:intron 45.0%
!! GTCTTCCACCCATTTTTCTG+CGG + chr5.1:73694185-73694204 None:intergenic 45.0%
!! ATTAAAATAAAATTAAAACT+TGG + chr5.1:73695679-73695698 None:intergenic 5.0%
ATTCTTGCTCCCCCTCCAAA+TGG + chr5.1:73696167-73696186 None:intergenic 50.0%
CAACACCGCAGAAAAATGGG+TGG - chr5.1:73694177-73694196 MS.gene062319:CDS 50.0%
CATTATACCCAAAGGGTGGC+AGG - chr5.1:73695949-73695968 MS.gene062319:CDS 50.0%
CCAATGCCAACACCAAGTCA+AGG - chr5.1:73696293-73696312 MS.gene062319:CDS 50.0%
CGCCAACACCGCAGAAAAAT+GGG - chr5.1:73694174-73694193 MS.gene062319:CDS 50.0%
CTGGTTCATTAGCCAAGAGC+CGG + chr5.1:73695345-73695364 None:intergenic 50.0%
GCTATGCTTGTCATGGTTGC+AGG - chr5.1:73695283-73695302 MS.gene062319:CDS 50.0%
GCTGCGGTTGTAGTGTGTAA+AGG + chr5.1:73695095-73695114 None:intergenic 50.0%
GGAATTCCAAGTGAACCTGG+AGG + chr5.1:73694115-73694134 None:intergenic 50.0%
TAAAGGAGGCTGTATTGCGG+AGG - chr5.1:73695545-73695564 MS.gene062319:intron 50.0%
TGCTAGGGTTGAAACTCTGG+TGG - chr5.1:73696205-73696224 MS.gene062319:CDS 50.0%
! AGGGACCCTTTTGGATGGTT+TGG + chr5.1:73694095-73694114 None:intergenic 50.0%
! GGAGGCACATTCAGATGCAT+TGG - chr5.1:73694476-73694495 MS.gene062319:CDS 50.0%
!! AGTAGGCCTTGACTTGGTGT+TGG + chr5.1:73696302-73696321 None:intergenic 50.0%
!! CACCCATTTTTCTGCGGTGT+TGG + chr5.1:73694179-73694198 None:intergenic 50.0%
!! CCTTGACTTGGTGTTGGCAT+TGG + chr5.1:73696296-73696315 None:intergenic 50.0%
!! CTACTGTTTGGTCTTGAGCG+TGG - chr5.1:73694995-73695014 MS.gene062319:CDS 50.0%
AATAGGGTGGGGTAGATGCC+AGG + chr5.1:73696136-73696155 None:intergenic 55.0%
ACACTACAACCGCAGCCTCA+AGG - chr5.1:73695099-73695118 MS.gene062319:CDS 55.0%
GAGAGAGAGAGAGACGAGCT+AGG - chr5.1:73695433-73695452 MS.gene062319:intron 55.0%
GCGCCAACACCGCAGAAAAA+TGG - chr5.1:73694173-73694192 MS.gene062319:CDS 55.0%
GGAAGGGAAACAGCAGCTCA+AGG - chr5.1:73694498-73694517 MS.gene062319:CDS 55.0%
GGATCCTTGCACTCTCCTTG+AGG + chr5.1:73695117-73695136 None:intergenic 55.0%
GGGGGAGCAAGAATATGTCC+AGG - chr5.1:73696173-73696192 MS.gene062319:CDS 55.0%
GTACAGATATAGGCAGGGGC+CGG - chr5.1:73694631-73694650 MS.gene062319:intron 55.0%
TTGCACTCTCCTTGAGGCTG+CGG + chr5.1:73695111-73695130 None:intergenic 55.0%
! TGAACCTGGAGGGACCCTTT+TGG + chr5.1:73694104-73694123 None:intergenic 55.0%
AGGGTCCCTCCAGGTTCACT+TGG - chr5.1:73694106-73694125 MS.gene062319:CDS 60.0%
CCATCCAAAAGGGTCCCTCC+AGG - chr5.1:73694097-73694116 MS.gene062319:CDS 60.0%
TGGCGCGCATAGCACGAAGA+AGG + chr5.1:73694159-73694178 None:intergenic 60.0%
! CCTGGAGGGACCCTTTTGGA+TGG + chr5.1:73694100-73694119 None:intergenic 60.0%
! GCAGCCTCAAGGAGAGTGCA+AGG - chr5.1:73695110-73695129 MS.gene062319:CDS 60.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 73694025 73696352 73694025 ID=MS.gene062319
chr5.1 mRNA 73694025 73696352 73694025 ID=MS.gene062319.t1;Parent=MS.gene062319
chr5.1 exon 73695858 73696352 73695858 ID=MS.gene062319.t1.exon1;Parent=MS.gene062319.t1
chr5.1 CDS 73695858 73696352 73695858 ID=cds.MS.gene062319.t1;Parent=MS.gene062319.t1
chr5.1 exon 73694989 73695427 73694989 ID=MS.gene062319.t1.exon2;Parent=MS.gene062319.t1
chr5.1 CDS 73694989 73695427 73694989 ID=cds.MS.gene062319.t1;Parent=MS.gene062319.t1
chr5.1 exon 73694407 73694594 73694407 ID=MS.gene062319.t1.exon3;Parent=MS.gene062319.t1
chr5.1 CDS 73694407 73694594 73694407 ID=cds.MS.gene062319.t1;Parent=MS.gene062319.t1
chr5.1 exon 73694025 73694327 73694025 ID=MS.gene062319.t1.exon4;Parent=MS.gene062319.t1
chr5.1 CDS 73694025 73694327 73694025 ID=cds.MS.gene062319.t1;Parent=MS.gene062319.t1
Gene Sequence

>MS.gene062319

ATGATGGCTAGTGTTCTTCTTGTTGCTCTCCTCTTACTCATTCCAGTTCTCTTTCTGCTAAAAAGAACCAAACCATCCAAAAGGGTCCCTCCAGGTTCACTTGGAATTCCCATTATTGGTCAAAGTCTTGGCCTTCTTCGTGCTATGCGCGCCAACACCGCAGAAAAATGGGTGGAAGACAGAATCAACAAGTATGGTCCTATTTCAAAGCTGAGTCTATTTGGAACACCAACTGTTTTGATTCATGGACAGGCTGCGAATAAGTTTATATTCACCAATCGCGATGAGAATATTGTTAACCAGCAAACACAGTCAATTAAGATGATATTAGGCGACAGGAACTTGCTTGAACTGAGTAGCAAAGATCATAGTAGAGTCAGAGGTGCACTTGTCCCGTTCTTGAAGCCAGAGTCTTTGAAGCAATATGTTGGTAAAATTGATGAAGAAGTTAGGAGGCACATTCAGATGCATTGGGAAGGGAAACAGCAGCTCAAGGTATGTTGCTACAAATCTTAACAAAATCAAAAGCTAATAAAAATACATGGTGTTAACTTGTGGTAATCTATAGGATCGGATCTATCTGGTATCGACACGGGTACAATACTAGTACAGATATAGGCAGGGGCCGGATTTCTCTAAAATGACCAAGTAAATACACATTAACATAAACTTACATTAAATTATATGAGAAAATAGAATTTGATATAAATATTGATCAAATTGTAGACAGAGATCTGATTCAGAGGGAAAATGACTTGATTTACTTGAATAGGAGATAAGAAGTAGTATTAAGTTACTTGATGGGTTAGACTAATTTATATGATTTCTGTACAAAATAAATACTTGATTACATATTCTTTTTGGGTTAAGAAATGAAAACTGAAGTAGGAAAAAAATTATACAATTTTTTTTTTTTTTCTGATAGGTATTGCCCCTAATGAAGACTCTCACTTTCAACATAATTTGTTCTCTACTGTTTGGTCTTGAGCGTGGAAAACAAAGAGATCAATTCATGAATCCATTTCAATCAATAATTAAGGGAATGTGGTCAGTCCCAATTAATGCACCCTTTACACACTACAACCGCAGCCTCAAGGAGAGTGCAAGGATCCAAAACATGTTAAAGGAAATCGTGCACCAGAAGAAAGTTGAATACGAGAAAAATGGCGCCAATTCCCGCCAAGACTTAATCAGTAGCTTGCTTAGTATGGTTGAAGATGGAAAACAAGTTTTAACTGAGAACGAAATTATCCATAATGCTATGCTTGTCATGGTTGCAGGACATGATACATCATCCATTCTAATCACTTTCATTATCCGGCTCTTGGCTAATGAACCAGCTATATGTGCAGCTGTTCTTAAAGGTATGCATAGACTTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGACGAGCTAGGATCCTCTTTTTCCATGCAGCCTACAGAAGGAAAAATTAGGGTGGGAGGAAAGACGAGATAAAGAGAAAACGAAAAAAATTTAGGGGATGTAAAGGAGGCTGTATTGCGGAGGATCCAAATTTAGGAGAGACATACAAACAGGCGTTGAGGGTAACTCTACAGTCGATCTCTTGCAAAATCTCAACTGTCGGATTAGTCTAGAGGGGCTACAAATAACGATCCAAGTTTTAATTTTATTTTAATACGATAGTGATTCAAGAATTATTCAATCGAGAATACTTAAAATGAAGGCAAAGAAATCTTGGTATTTGATTTTTATGATTGCAGAACAGGAAGAGATAGCTAAAGGCAAGCTCTTGGGAGAGACTCTAACATGGGAAGACCTTTCAAAGATGAAGTATACTTGGAGAGTAGCAATGGAAACTCTGAGAAGGTTTTCTCCCATCTTTGGTGGATTCAGAAAAACTACAACAGATATTGAATATGGTGGATACATTATACCCAAAGGGTGGCAGGTAAATGAAACTCTAGTGTATGTCATTGATGAACTTCTCAACATGCAATCTAATTAACATAAAACTTGTCTTTTTATAGATCTTTTGGGTTACATCAATGACTCACATGGACAACAACATTTTCCCAGAACCTTCACAGTTTGATCCAAGTAGATTTGAAAACCTGGCATCTACCCCACCCTATTGCTTTGTTCCATTTGGAGGGGGAGCAAGAATATGTCCAGGATATGAGTTTGCTAGGGTTGAAACTCTGGTGGCGATTCATTACCTTGTGACCAAATTCAGTTGTAAGCTACTTTCAGACAATTCTTTCAGCAGGGATCCAATGCCAACACCAAGTCAAGGCCTACTGATTGAACTTTGCCCAAGGAAACTATCTTAG
Protein sequence

>MS.gene062319.t1

MMASVLLVALLLLIPVLFLLKRTKPSKRVPPGSLGIPIIGQSLGLLRAMRANTAEKWVEDRINKYGPISKLSLFGTPTVLIHGQAANKFIFTNRDENIVNQQTQSIKMILGDRNLLELSSKDHSRVRGALVPFLKPESLKQYVGKIDEEVRRHIQMHWEGKQQLKVLPLMKTLTFNIICSLLFGLERGKQRDQFMNPFQSIIKGMWSVPINAPFTHYNRSLKESARIQNMLKEIVHQKKVEYEKNGANSRQDLISSLLSMVEDGKQVLTENEIIHNAMLVMVAGHDTSSILITFIIRLLANEPAICAAVLKEQEEIAKGKLLGETLTWEDLSKMKYTWRVAMETLRRFSPIFGGFRKTTTDIEYGGYIIPKGWQIFWVTSMTHMDNNIFPEPSQFDPSRFENLASTPPYCFVPFGGGARICPGYEFARVETLVAIHYLVTKFSCKLLSDNSFSRDPMPTPSQGLLIELCPRKLS