Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062421.t1 | RHN44803.1 | 95.5 | 133 | 6 | 0 | 1 | 133 | 18 | 150 | 3.40E-64 | 255 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062421.t1 | A0A072TYJ6 | 95.5 | 133 | 6 | 0 | 1 | 133 | 1 | 133 | 2.4e-64 | 255.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053097 | MS.gene062421 | 0.807618 | 4.63E-50 | -1.69E-46 |
| MS.gene059545 | MS.gene062421 | 0.805887 | 1.07E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062421.t1 | MTR_7g024873 | 95.489 | 133 | 6 | 0 | 1 | 133 | 1 | 133 | 1.82e-90 | 263 |
| MS.gene062421.t1 | MTR_7g024890 | 93.985 | 133 | 8 | 0 | 1 | 133 | 1 | 133 | 2.97e-88 | 257 |
| MS.gene062421.t1 | MTR_7g024880 | 93.985 | 133 | 8 | 0 | 1 | 133 | 1 | 133 | 3.64e-87 | 254 |
| MS.gene062421.t1 | MTR_8g446810 | 47.059 | 136 | 69 | 1 | 1 | 133 | 1 | 136 | 1.17e-37 | 129 |
| MS.gene062421.t1 | MTR_7g024900 | 94.118 | 51 | 3 | 0 | 1 | 51 | 1 | 51 | 4.44e-27 | 99.0 |
| MS.gene062421.t1 | MTR_1g081270 | 35.915 | 142 | 82 | 2 | 1 | 142 | 1 | 133 | 1.32e-19 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062421.t1 | AT2G44310 | 44.366 | 142 | 77 | 1 | 1 | 140 | 1 | 142 | 3.68e-37 | 127 |
Find 45 sgRNAs with CRISPR-Local
Find 130 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCAAGACCTTCTGAATTT+TGG | 0.153384 | 7.3:-75211825 | None:intergenic |
| TGGAAGCGTTTCCATCTTTA+AGG | 0.158325 | 7.3:+75211894 | MS.gene062421:CDS |
| AAAGATGAGTGTAGAAATTT+TGG | 0.159822 | 7.3:+75210311 | None:intergenic |
| CTTGAATGGCACAATTGATT+TGG | 0.268459 | 7.3:+75210566 | MS.gene062421:CDS |
| CCTCATGGTTATCACCAAAA+AGG | 0.326211 | 7.3:-75211862 | None:intergenic |
| TAAACACGAGCAAGCTCGTT+TGG | 0.337682 | 7.3:-75210513 | None:intergenic |
| CCACCAGCTTGCTAACAAAA+AGG | 0.344961 | 7.3:-75211784 | None:intergenic |
| TAACCATGAGGAGATCGTTT+TGG | 0.382833 | 7.3:+75211874 | MS.gene062421:CDS |
| CATGCCAATTCAAATGGTCT+TGG | 0.391639 | 7.3:+75210647 | MS.gene062421:CDS |
| TCTTCCAAGACCATTTGAAT+TGG | 0.395041 | 7.3:-75210651 | None:intergenic |
| AGCTATCCCCGCACTACAAA+AGG | 0.410142 | 7.3:+75211656 | MS.gene062421:CDS |
| TCTTCCTCATCCCTTAAAGA+TGG | 0.419242 | 7.3:-75211905 | None:intergenic |
| CGCACGAATCGACATTTAGC+TGG | 0.437375 | 7.3:+75211702 | MS.gene062421:CDS |
| TTAATAGCTCAGTTGGAAAT+CGG | 0.444141 | 7.3:+75210376 | MS.gene062421:CDS |
| AAAGCGTTTAATAGCTCAGT+TGG | 0.454078 | 7.3:+75210369 | MS.gene062421:CDS |
| AGCAAGCTGGTGGTGGAGCT+TGG | 0.456655 | 7.3:+75211794 | MS.gene062421:CDS |
| GGGTTTCATGCCAATTCAAA+TGG | 0.458206 | 7.3:+75210641 | MS.gene062421:CDS |
| GGAAGCGTTTCCATCTTTAA+GGG | 0.461208 | 7.3:+75211895 | MS.gene062421:CDS |
| AAACACGAGCAAGCTCGTTT+GGG | 0.462526 | 7.3:-75210512 | None:intergenic |
| CTAAATGTCGATTCGTGCGC+AGG | 0.464761 | 7.3:-75211698 | None:intergenic |
| GAAGGAGCTCCGGAGCTTGA+GGG | 0.481338 | 7.3:+75210452 | MS.gene062421:CDS |
| CAGTTCGATCACAACTTGAA+TGG | 0.485615 | 7.3:+75210552 | MS.gene062421:CDS |
| CGTTGAATAGAGATTGTTTG+TGG | 0.499213 | 7.3:-75211749 | None:intergenic |
| CTCTTATGATGAGATGTTGA+AGG | 0.511648 | 7.3:+75210434 | MS.gene062421:CDS |
| GCTTGCAATGGCAGATGGGA+TGG | 0.521128 | 7.3:+75210620 | MS.gene062421:CDS |
| TGAAGGAGCTCCGGAGCTTG+AGG | 0.522904 | 7.3:+75210451 | MS.gene062421:CDS |
| GTTTCCATCTTTAAGGGATG+AGG | 0.525560 | 7.3:+75211901 | MS.gene062421:CDS |
| ATGAGATGTTGAAGGAGCTC+CGG | 0.525969 | 7.3:+75210442 | MS.gene062421:CDS |
| CTGGTGGTGGAGCTTGGATG+TGG | 0.540875 | 7.3:+75211800 | MS.gene062421:CDS |
| CTTGCAATGGCAGATGGGAT+GGG | 0.557101 | 7.3:+75210621 | MS.gene062421:CDS |
| ATGATGCTTGCAATGGCAGA+TGG | 0.558215 | 7.3:+75210615 | MS.gene062421:CDS |
| GCACGAATCGACATTTAGCT+GGG | 0.560269 | 7.3:+75211703 | MS.gene062421:CDS |
| GCTATCCCCGCACTACAAAA+GGG | 0.571739 | 7.3:+75211657 | MS.gene062421:CDS |
| CTTCCAAAACGATCTCCTCA+TGG | 0.576931 | 7.3:-75211877 | None:intergenic |
| CATTTAGCTGGGGACGAAGT+GGG | 0.578280 | 7.3:+75211714 | MS.gene062421:CDS |
| AACACACTTTGGTATTGATG+TGG | 0.581840 | 7.3:+75210482 | MS.gene062421:CDS |
| TTCAAGGAAGTGGACAATTG+TGG | 0.596143 | 7.3:-75210340 | None:intergenic |
| CGCCTCGACACAAACAGCGA+TGG | 0.598011 | 7.3:+75210405 | MS.gene062421:CDS |
| ACATTTAGCTGGGGACGAAG+TGG | 0.601042 | 7.3:+75211713 | MS.gene062421:CDS |
| AAAGCAGATGATGCTTGCAA+TGG | 0.609930 | 7.3:+75210608 | MS.gene062421:CDS |
| GACCATCGCTGTTTGTGTCG+AGG | 0.621315 | 7.3:-75210407 | None:intergenic |
| TGATGCTTGCAATGGCAGAT+GGG | 0.625156 | 7.3:+75210616 | MS.gene062421:CDS |
| ATGTGGCACCAAAATTCAGA+AGG | 0.642720 | 7.3:+75211817 | MS.gene062421:CDS |
| GTGCGCAGGATATCTAGCAG+TGG | 0.658293 | 7.3:-75211684 | None:intergenic |
| CACGAATCGACATTTAGCTG+GGG | 0.708786 | 7.3:+75211704 | MS.gene062421:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATATATAACTTTCTTTT+TGG | - | chr7.3:75210981-75211000 | None:intergenic | 10.0% |
| !!! | AAATAGAATGTTTTACAGTT+TGG | + | chr7.3:75211260-75211279 | MS.gene062421:intron | 20.0% |
| !!! | ATATGTATATATGCTTGTTA+AGG | + | chr7.3:75211421-75211440 | MS.gene062421:intron | 20.0% |
| !!! | TACCAAGTGTTTTTTTTTTT+TGG | + | chr7.3:75211002-75211021 | MS.gene062421:intron | 20.0% |
| !!! | TATGTATATATGCTTGTTAA+GGG | + | chr7.3:75211422-75211441 | MS.gene062421:intron | 20.0% |
| ! | AAAAGTTGGGAAAACATATA+AGG | + | chr7.3:75211301-75211320 | MS.gene062421:intron | 25.0% |
| ! | CTCCAAAAAAAAAAAACACT+TGG | - | chr7.3:75211007-75211026 | None:intergenic | 25.0% |
| ! | GTCTATTACATGAATACATT+CGG | - | chr7.3:75210805-75210824 | None:intergenic | 25.0% |
| ! | TAATTTGGAAAGAATTAGAC+AGG | - | chr7.3:75211610-75211629 | None:intergenic | 25.0% |
| ! | TGATATTACTAAATGCTTGT+TGG | - | chr7.3:75210911-75210930 | None:intergenic | 25.0% |
| ! | TGTCTAATTCTTTCCAAATT+AGG | + | chr7.3:75211609-75211628 | MS.gene062421:intron | 25.0% |
| !! | TCCATAACAAAACAGTTTTA+AGG | - | chr7.3:75210780-75210799 | None:intergenic | 25.0% |
| !!! | AATGTTTTACAGTTTGGTTT+TGG | + | chr7.3:75211266-75211285 | MS.gene062421:intron | 25.0% |
| !!! | CAAGTGTTTTTTTTTTTTGG+AGG | + | chr7.3:75211005-75211024 | MS.gene062421:intron | 25.0% |
| !!! | CTTTTTGGTGAATCAAATTT+TGG | - | chr7.3:75210966-75210985 | None:intergenic | 25.0% |
| !!! | GAACTTTGTTTTGATAAGTT+GGG | - | chr7.3:75210934-75210953 | None:intergenic | 25.0% |
| !!! | TCCTTAAAACTGTTTTGTTA+TGG | + | chr7.3:75210776-75210795 | MS.gene062421:intron | 25.0% |
| !!! | TGAACTTTGTTTTGATAAGT+TGG | - | chr7.3:75210935-75210954 | None:intergenic | 25.0% |
| CAATCCTTAAGTATCAAGAA+GGG | + | chr7.3:75211389-75211408 | MS.gene062421:intron | 30.0% | |
| GGATGAAGAAGATAAAGATT+TGG | + | chr7.3:75211490-75211509 | MS.gene062421:intron | 30.0% | |
| GTGTAAACATGCTAAAAGTT+GGG | + | chr7.3:75211288-75211307 | MS.gene062421:intron | 30.0% | |
| TCATCAAATTCGTCCTAATT+TGG | - | chr7.3:75211625-75211644 | None:intergenic | 30.0% | |
| TTAATAGCTCAGTTGGAAAT+CGG | + | chr7.3:75210376-75210395 | MS.gene062421:CDS | 30.0% | |
| TTCACTATTCAAATACCACT+TGG | - | chr7.3:75211036-75211055 | None:intergenic | 30.0% | |
| ! | ACCAAAAAGGTTACTTCTTT+TGG | - | chr7.3:75211852-75211871 | None:intergenic | 30.0% |
| ! | ATGAGTGTAGAAATTTTGGA+TGG | + | chr7.3:75210315-75210334 | MS.gene062421:CDS | 30.0% |
| ! | GAGCTTTTACATCTTTGTTA+TGG | + | chr7.3:75210836-75210855 | MS.gene062421:intron | 30.0% |
| ! | TCCAAAAGAAGTAACCTTTT+TGG | + | chr7.3:75211848-75211867 | MS.gene062421:CDS | 30.0% |
| ! | TGAAAGAGAGTACAATAAAG+TGG | + | chr7.3:75210698-75210717 | MS.gene062421:intron | 30.0% |
| !!! | ACAGTTTTAAGGAGTTTCAA+AGG | - | chr7.3:75210769-75210788 | None:intergenic | 30.0% |
| !!! | GTAAATTTTTTTGGTGGTGA+TGG | + | chr7.3:75211206-75211225 | MS.gene062421:intron | 30.0% |
| !!! | TAAACGCTTTTTCATCTTCA+AGG | - | chr7.3:75210359-75210378 | None:intergenic | 30.0% |
| ATCAAAGATGTTATGGACGT+CGG | + | chr7.3:75211178-75211197 | MS.gene062421:intron | 35.0% | |
| CATCCTTCATACACTTCATT+TGG | - | chr7.3:75211475-75211494 | None:intergenic | 35.0% | |
| CCAAGAACTAAAGTTTGTGA+AGG | + | chr7.3:75211360-75211379 | MS.gene062421:intron | 35.0% | |
| CCAATCCTTAAGTATCAAGA+AGG | + | chr7.3:75211388-75211407 | MS.gene062421:intron | 35.0% | |
| CCTTCTTGATACTTAAGGAT+TGG | - | chr7.3:75211391-75211410 | None:intergenic | 35.0% | |
| CGTTGAATAGAGATTGTTTG+TGG | - | chr7.3:75211752-75211771 | None:intergenic | 35.0% | |
| CTCTTATGATGAGATGTTGA+AGG | + | chr7.3:75210434-75210453 | MS.gene062421:CDS | 35.0% | |
| CTTGAATGGCACAATTGATT+TGG | + | chr7.3:75210566-75210585 | MS.gene062421:CDS | 35.0% | |
| GGTGTAAACATGCTAAAAGT+TGG | + | chr7.3:75211287-75211306 | MS.gene062421:intron | 35.0% | |
| TCTTCCAAGACCATTTGAAT+TGG | - | chr7.3:75210654-75210673 | None:intergenic | 35.0% | |
| TGAGAAAGAGACCAATAAAG+CGG | + | chr7.3:75211328-75211347 | MS.gene062421:intron | 35.0% | |
| TGCGAGAATCAAAGATGTTA+TGG | + | chr7.3:75211171-75211190 | MS.gene062421:intron | 35.0% | |
| ! | AAAGCGTTTAATAGCTCAGT+TGG | + | chr7.3:75210369-75210388 | MS.gene062421:CDS | 35.0% |
| ! | ACTCAAGACCTTCTGAATTT+TGG | - | chr7.3:75211828-75211847 | None:intergenic | 35.0% |
| ! | ATAAAGATTTGGTTCACGTC+GGG | + | chr7.3:75211501-75211520 | MS.gene062421:intron | 35.0% |
| ! | GATAAAGATTTGGTTCACGT+CGG | + | chr7.3:75211500-75211519 | MS.gene062421:intron | 35.0% |
| !! | AACACACTTTGGTATTGATG+TGG | + | chr7.3:75210482-75210501 | MS.gene062421:CDS | 35.0% |
| !! | CCTTCACAAACTTTAGTTCT+TGG | - | chr7.3:75211363-75211382 | None:intergenic | 35.0% |
| !! | CTCTTTCAACAGCTATTTTG+AGG | - | chr7.3:75210686-75210705 | None:intergenic | 35.0% |
| !! | CTTTTTCATCTTCAAGGAAG+TGG | - | chr7.3:75210353-75210372 | None:intergenic | 35.0% |
| !! | GATGAAACATGGTTCTGATA+GGG | - | chr7.3:75211574-75211593 | None:intergenic | 35.0% |
| !! | TTTTTGGAGGAAATACCAAG+TGG | + | chr7.3:75211018-75211037 | MS.gene062421:intron | 35.0% |
| !!! | AGGGTTTTTGAAACACACTT+TGG | + | chr7.3:75210471-75210490 | MS.gene062421:CDS | 35.0% |
| AAAGCAGATGATGCTTGCAA+TGG | + | chr7.3:75210608-75210627 | MS.gene062421:CDS | 40.0% | |
| ATAAATGATCTTCCCACACG+AGG | + | chr7.3:75211058-75211077 | MS.gene062421:intron | 40.0% | |
| ATGTGGCACCAAAATTCAGA+AGG | + | chr7.3:75211817-75211836 | MS.gene062421:CDS | 40.0% | |
| CAGTTCGATCACAACTTGAA+TGG | + | chr7.3:75210552-75210571 | MS.gene062421:CDS | 40.0% | |
| CATGCCAATTCAAATGGTCT+TGG | + | chr7.3:75210647-75210666 | MS.gene062421:CDS | 40.0% | |
| CCTCATGGTTATCACCAAAA+AGG | - | chr7.3:75211865-75211884 | None:intergenic | 40.0% | |
| GCACCAAATGAAGTGTATGA+AGG | + | chr7.3:75211469-75211488 | MS.gene062421:intron | 40.0% | |
| GGAAAGAATTAGACAGGTTC+TGG | - | chr7.3:75211604-75211623 | None:intergenic | 40.0% | |
| GGGTTTCATGCCAATTCAAA+TGG | + | chr7.3:75210641-75210660 | MS.gene062421:CDS | 40.0% | |
| TCAAAGATGTTATGGACGTC+GGG | + | chr7.3:75211179-75211198 | MS.gene062421:intron | 40.0% | |
| TCCTCCCTTCTTGATACTTA+AGG | - | chr7.3:75211396-75211415 | None:intergenic | 40.0% | |
| TCCTTAAGTATCAAGAAGGG+AGG | + | chr7.3:75211392-75211411 | MS.gene062421:intron | 40.0% | |
| TCTTCCTCATCCCTTAAAGA+TGG | - | chr7.3:75211908-75211927 | None:intergenic | 40.0% | |
| TTCAAGGAAGTGGACAATTG+TGG | - | chr7.3:75210343-75210362 | None:intergenic | 40.0% | |
| TTTCAAAAACCCTCAAGCTC+CGG | - | chr7.3:75210464-75210483 | None:intergenic | 40.0% | |
| ! | GTTTCCATCTTTAAGGGATG+AGG | + | chr7.3:75211901-75211920 | MS.gene062421:CDS | 40.0% |
| ! | TAAAGATTTGGTTCACGTCG+GGG | + | chr7.3:75211502-75211521 | MS.gene062421:intron | 40.0% |
| ! | TAACCATGAGGAGATCGTTT+TGG | + | chr7.3:75211874-75211893 | MS.gene062421:CDS | 40.0% |
| !! | ATCCTTCTAAAACCTCGTGT+GGG | - | chr7.3:75211073-75211092 | None:intergenic | 40.0% |
| !! | CCTTTTTGGTGATAACCATG+AGG | + | chr7.3:75211862-75211881 | MS.gene062421:CDS | 40.0% |
| !! | CGATGAAACATGGTTCTGAT+AGG | - | chr7.3:75211575-75211594 | None:intergenic | 40.0% |
| !! | GGAAGCGTTTCCATCTTTAA+GGG | + | chr7.3:75211895-75211914 | MS.gene062421:CDS | 40.0% |
| !! | TGGAAGCGTTTCCATCTTTA+AGG | + | chr7.3:75211894-75211913 | MS.gene062421:CDS | 40.0% |
| !! | TTGGTGGTGATGGAATGAAT+GGG | + | chr7.3:75211216-75211235 | MS.gene062421:intron | 40.0% |
| !! | TTTGGTGGTGATGGAATGAA+TGG | + | chr7.3:75211215-75211234 | MS.gene062421:intron | 40.0% |
| !!! | GGTCGGGTAAATTTTTTTGG+TGG | + | chr7.3:75211200-75211219 | MS.gene062421:intron | 40.0% |
| !!! | TCGGGTCGGGTAAATTTTTT+TGG | + | chr7.3:75211197-75211216 | MS.gene062421:intron | 40.0% |
| AAACACGAGCAAGCTCGTTT+GGG | - | chr7.3:75210515-75210534 | None:intergenic | 45.0% | |
| ATGAGATGTTGAAGGAGCTC+CGG | + | chr7.3:75210442-75210461 | MS.gene062421:CDS | 45.0% | |
| ATGATGCTTGCAATGGCAGA+TGG | + | chr7.3:75210615-75210634 | MS.gene062421:CDS | 45.0% | |
| CAACATGAGGTTGAAGTAGG+TGG | + | chr7.3:75211548-75211567 | MS.gene062421:intron | 45.0% | |
| CACCTACTTCAACCTCATGT+TGG | - | chr7.3:75211550-75211569 | None:intergenic | 45.0% | |
| CACGAATCGACATTTAGCTG+GGG | + | chr7.3:75211704-75211723 | MS.gene062421:CDS | 45.0% | |
| CTACTTCAACCTCATGTTGG+AGG | - | chr7.3:75211547-75211566 | None:intergenic | 45.0% | |
| CTCCAACATGAGGTTGAAGT+AGG | + | chr7.3:75211545-75211564 | MS.gene062421:intron | 45.0% | |
| CTTCCAAAACGATCTCCTCA+TGG | - | chr7.3:75211880-75211899 | None:intergenic | 45.0% | |
| GCACGAATCGACATTTAGCT+GGG | + | chr7.3:75211703-75211722 | MS.gene062421:CDS | 45.0% | |
| TAAACACGAGCAAGCTCGTT+TGG | - | chr7.3:75210516-75210535 | None:intergenic | 45.0% | |
| TAACAAAAAGGCGGCGTTCA+GGG | - | chr7.3:75211775-75211794 | None:intergenic | 45.0% | |
| TGATGCTTGCAATGGCAGAT+GGG | + | chr7.3:75210616-75210635 | MS.gene062421:CDS | 45.0% | |
| ! | CCTTTTTGTTAGCAAGCTGG+TGG | + | chr7.3:75211784-75211803 | MS.gene062421:CDS | 45.0% |
| ! | TGGACATCCCTTTTGTAGTG+CGG | - | chr7.3:75211667-75211686 | None:intergenic | 45.0% |
| ! | TTTTGTTAGCAAGCTGGTGG+TGG | + | chr7.3:75211787-75211806 | MS.gene062421:CDS | 45.0% |
| !! | CATCCTTCTAAAACCTCGTG+TGG | - | chr7.3:75211074-75211093 | None:intergenic | 45.0% |
| !! | CCACCAGCTTGCTAACAAAA+AGG | - | chr7.3:75211787-75211806 | None:intergenic | 45.0% |
| !! | CCAGCTTGCTAACAAAAAGG+CGG | - | chr7.3:75211784-75211803 | None:intergenic | 45.0% |
| !!! | TTCCCACACGAGGTTTTAGA+AGG | + | chr7.3:75211068-75211087 | MS.gene062421:intron | 45.0% |
| ACATTTAGCTGGGGACGAAG+TGG | + | chr7.3:75211713-75211732 | MS.gene062421:CDS | 50.0% | |
| AGATGTTATGGACGTCGGGT+CGG | + | chr7.3:75211183-75211202 | MS.gene062421:intron | 50.0% | |
| AGCTATCCCCGCACTACAAA+AGG | + | chr7.3:75211656-75211675 | MS.gene062421:CDS | 50.0% | |
| CATTTAGCTGGGGACGAAGT+GGG | + | chr7.3:75211714-75211733 | MS.gene062421:CDS | 50.0% | |
| CGCACGAATCGACATTTAGC+TGG | + | chr7.3:75211702-75211721 | MS.gene062421:CDS | 50.0% | |
| CTAACAAAAAGGCGGCGTTC+AGG | - | chr7.3:75211776-75211795 | None:intergenic | 50.0% | |
| CTGGCGAAAGCGATGAAACA+TGG | - | chr7.3:75211585-75211604 | None:intergenic | 50.0% | |
| CTTGCAATGGCAGATGGGAT+GGG | + | chr7.3:75210621-75210640 | MS.gene062421:CDS | 50.0% | |
| GACCAATAAAGCGGTGAGTG+AGG | + | chr7.3:75211337-75211356 | MS.gene062421:intron | 50.0% | |
| GCTATCCCCGCACTACAAAA+GGG | + | chr7.3:75211657-75211676 | MS.gene062421:CDS | 50.0% | |
| ! | CCGCCTTTTTGTTAGCAAGC+TGG | + | chr7.3:75211781-75211800 | MS.gene062421:CDS | 50.0% |
| ! | GACATCCCTTTTGTAGTGCG+GGG | - | chr7.3:75211665-75211684 | None:intergenic | 50.0% |
| ! | GGACATCCCTTTTGTAGTGC+GGG | - | chr7.3:75211666-75211685 | None:intergenic | 50.0% |
| !! | CTAAATGTCGATTCGTGCGC+AGG | - | chr7.3:75211701-75211720 | None:intergenic | 50.0% |
| CAACCTCATGTTGGAGGTCC+TGG | - | chr7.3:75211541-75211560 | None:intergenic | 55.0% | |
| CACGTCGGGGAGACTATCTT+TGG | + | chr7.3:75211515-75211534 | MS.gene062421:intron | 55.0% | |
| GACCATCGCTGTTTGTGTCG+AGG | - | chr7.3:75210410-75210429 | None:intergenic | 55.0% | |
| GATGTTATGGACGTCGGGTC+GGG | + | chr7.3:75211184-75211203 | MS.gene062421:intron | 55.0% | |
| GCTTGCAATGGCAGATGGGA+TGG | + | chr7.3:75210620-75210639 | MS.gene062421:CDS | 55.0% | |
| GGCCTCACTCACCGCTTTAT+TGG | - | chr7.3:75211342-75211361 | None:intergenic | 55.0% | |
| GTGCGCAGGATATCTAGCAG+TGG | - | chr7.3:75211687-75211706 | None:intergenic | 55.0% | |
| CGCCTCGACACAAACAGCGA+TGG | + | chr7.3:75210405-75210424 | MS.gene062421:CDS | 60.0% | |
| CGGGGAGACTATCTTTGGCC+AGG | + | chr7.3:75211520-75211539 | MS.gene062421:intron | 60.0% | |
| GAAGGAGCTCCGGAGCTTGA+GGG | + | chr7.3:75210452-75210471 | MS.gene062421:CDS | 60.0% | |
| TGAAGGAGCTCCGGAGCTTG+AGG | + | chr7.3:75210451-75210470 | MS.gene062421:CDS | 60.0% | |
| TGGCCAGGACCTCCAACATG+AGG | + | chr7.3:75211535-75211554 | MS.gene062421:intron | 60.0% | |
| !! | AGCAAGCTGGTGGTGGAGCT+TGG | + | chr7.3:75211794-75211813 | MS.gene062421:CDS | 60.0% |
| !! | CTGGTGGTGGAGCTTGGATG+TGG | + | chr7.3:75211800-75211819 | MS.gene062421:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 75210315 | 75211940 | 75210315 | ID=MS.gene062421 |
| chr7.3 | mRNA | 75210315 | 75211940 | 75210315 | ID=MS.gene062421.t1;Parent=MS.gene062421 |
| chr7.3 | exon | 75210315 | 75210706 | 75210315 | ID=MS.gene062421.t1.exon1;Parent=MS.gene062421.t1 |
| chr7.3 | CDS | 75210315 | 75210706 | 75210315 | ID=cds.MS.gene062421.t1;Parent=MS.gene062421.t1 |
| chr7.3 | exon | 75211631 | 75211940 | 75211631 | ID=MS.gene062421.t1.exon2;Parent=MS.gene062421.t1 |
| chr7.3 | CDS | 75211631 | 75211940 | 75211631 | ID=cds.MS.gene062421.t1;Parent=MS.gene062421.t1 |
| Gene Sequence |
| Protein sequence |
