Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06279.t1 | XP_021994399.1 | 33.7 | 175 | 113 | 2 | 98 | 269 | 264 | 438 | 4.10E-24 | 122.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06279.t1 | Q56X46 | 30.9 | 175 | 118 | 2 | 98 | 269 | 269 | 443 | 6.0e-24 | 112.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06279.t1 | A0A251TDU1 | 33.7 | 175 | 113 | 2 | 98 | 269 | 264 | 438 | 3.0e-24 | 122.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057576 | MS.gene06279 | 0.852457 | 4.56E-61 | -1.69E-46 |
| MS.gene057584 | MS.gene06279 | 0.853831 | 1.84E-61 | -1.69E-46 |
| MS.gene057586 | MS.gene06279 | 0.807756 | 4.33E-50 | -1.69E-46 |
| MS.gene057588 | MS.gene06279 | 0.811668 | 6.24E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06279.t1 | MTR_3g099260 | 58.889 | 90 | 35 | 2 | 157 | 245 | 72 | 160 | 2.18e-28 | 107 |
| MS.gene06279.t1 | MTR_5g032090 | 32.961 | 179 | 117 | 2 | 98 | 273 | 266 | 444 | 1.85e-27 | 111 |
| MS.gene06279.t1 | MTR_3g100320 | 32.203 | 177 | 117 | 2 | 98 | 271 | 269 | 445 | 9.82e-27 | 109 |
| MS.gene06279.t1 | MTR_3g100280 | 32.402 | 179 | 118 | 2 | 98 | 273 | 278 | 456 | 1.05e-26 | 109 |
| MS.gene06279.t1 | MTR_3g100280 | 32.402 | 179 | 118 | 2 | 98 | 273 | 115 | 293 | 1.29e-26 | 108 |
| MS.gene06279.t1 | MTR_3g100320 | 33.793 | 145 | 93 | 2 | 98 | 239 | 281 | 425 | 2.20e-19 | 87.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06279.t1 | AT5G10490 | 30.168 | 179 | 122 | 2 | 98 | 273 | 241 | 419 | 1.85e-25 | 105 |
| MS.gene06279.t1 | AT5G10490 | 30.168 | 179 | 122 | 2 | 98 | 273 | 267 | 445 | 1.95e-25 | 105 |
| MS.gene06279.t1 | AT5G10490 | 30.168 | 179 | 122 | 2 | 98 | 273 | 269 | 447 | 2.01e-25 | 105 |
| MS.gene06279.t1 | AT1G58200 | 25.455 | 275 | 193 | 4 | 1 | 271 | 181 | 447 | 1.18e-23 | 100 |
| MS.gene06279.t1 | AT1G58200 | 25.455 | 275 | 193 | 4 | 1 | 271 | 181 | 447 | 1.18e-23 | 100 |
Find 65 sgRNAs with CRISPR-Local
Find 369 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTTGTTCATGGGATTTC+AGG | 0.152979 | 3.1:-78205645 | MS.gene06279:CDS |
| ATGGTTTGTTGACGCGAATT+TGG | 0.255946 | 3.1:-78205525 | MS.gene06279:CDS |
| CGAAGTTTCCGGTACTCTTC+AGG | 0.290963 | 3.1:-78205152 | MS.gene06279:intron |
| AATTTCTTGATCAACTTCAT+AGG | 0.322449 | 3.1:+78199270 | None:intergenic |
| TGGTTTGTTGACGCGAATTT+GGG | 0.337244 | 3.1:-78205524 | MS.gene06279:CDS |
| GACTTTGGCAAGATGTTTAC+CGG | 0.349233 | 3.1:-78205301 | MS.gene06279:CDS |
| GGCAAGATGTTTACCGGAAT+GGG | 0.350360 | 3.1:-78205295 | MS.gene06279:CDS |
| GGTTCATGGGATTTCAGAAT+TGG | 0.352213 | 3.1:-78205568 | MS.gene06279:CDS |
| GGTTCATGGGATTTCAGAAT+TGG | 0.352213 | 3.1:-78205619 | MS.gene06279:CDS |
| CATGTTTCCACAATGGTTGC+AGG | 0.358145 | 3.1:-78205687 | MS.gene06279:CDS |
| TCAATATTCAGTTTCTCAAC+TGG | 0.367640 | 3.1:+78201219 | None:intergenic |
| CGCGAATTTGGGTTTGAGAA+TGG | 0.373836 | 3.1:-78205513 | MS.gene06279:CDS |
| AAGCATGGATGTTCCCATTC+CGG | 0.378820 | 3.1:+78205282 | None:intergenic |
| CACGACGGAGTCGAAGTTTC+CGG | 0.383689 | 3.1:-78205163 | MS.gene06279:CDS |
| TGTTCATGGGATTTCAGGAT+TGG | 0.389407 | 3.1:-78205640 | MS.gene06279:CDS |
| GGGATTTCAGGATTGGTTCA+TGG | 0.397408 | 3.1:-78205582 | MS.gene06279:CDS |
| GGGATTTCAGGATTGGTTCA+TGG | 0.397408 | 3.1:-78205633 | MS.gene06279:CDS |
| CTGAACAACTATGTGGACTT+TGG | 0.401016 | 3.1:-78205316 | MS.gene06279:CDS |
| TCATTGTAGAGTATTCTAAC+TGG | 0.403512 | 3.1:-78199806 | MS.gene06279:intron |
| TGGGATTTCAGAATTGGCTT+AGG | 0.410372 | 3.1:-78205562 | MS.gene06279:CDS |
| TGGGATTTCAGAATTGGCTT+AGG | 0.410372 | 3.1:-78205613 | MS.gene06279:CDS |
| TTATGAATGGAGAGATCGTT+AGG | 0.415316 | 3.1:-78201314 | MS.gene06279:CDS |
| TCAGTTACGATCTTTGTTCA+TGG | 0.419089 | 3.1:-78205654 | MS.gene06279:CDS |
| TGTGTCACAGGGCATGGCTT+TGG | 0.424648 | 3.1:-78205375 | MS.gene06279:intron |
| AAATTAAACACTTACCCCTA+TGG | 0.439714 | 3.1:+78199694 | None:intergenic |
| GGATTTCAGGATTGGTTCAT+GGG | 0.444281 | 3.1:-78205581 | MS.gene06279:CDS |
| GGATTTCAGGATTGGTTCAT+GGG | 0.444281 | 3.1:-78205632 | MS.gene06279:CDS |
| TTCAAAAGAATGCATTGATT+CGG | 0.448508 | 3.1:+78205187 | None:intergenic |
| CAGTTACGATCTTTGTTCAT+GGG | 0.449925 | 3.1:-78205653 | MS.gene06279:CDS |
| TGCAAAACGGTACTCACAAC+GGG | 0.462464 | 3.1:-78201260 | MS.gene06279:CDS |
| TGGCAAGATGTTTACCGGAA+TGG | 0.462951 | 3.1:-78205296 | MS.gene06279:CDS |
| TCTTCAGTTCGACTTATGAA+TGG | 0.464306 | 3.1:-78201327 | MS.gene06279:CDS |
| GGGATTTCAGAATTGGCTTA+GGG | 0.470420 | 3.1:-78205561 | MS.gene06279:CDS |
| GGGATTTCAGAATTGGCTTA+GGG | 0.470420 | 3.1:-78205612 | MS.gene06279:CDS |
| GGGTTTGAGAATGGCAAGTG+TGG | 0.473499 | 3.1:-78205504 | MS.gene06279:CDS |
| GTCACAGGGCATGGCTTTGG+TGG | 0.475807 | 3.1:-78205372 | MS.gene06279:intron |
| GTTCACTTTGATGCCGCTCC+TGG | 0.485705 | 3.1:-78199728 | MS.gene06279:CDS |
| AACTGGAATGGCTGGCGTGT+TGG | 0.490100 | 3.1:-78199789 | MS.gene06279:CDS |
| CTGGTAGTACACAGACCATA+GGG | 0.502672 | 3.1:-78199709 | MS.gene06279:CDS |
| GGTTTGAGAATGGCAAGTGT+GGG | 0.510223 | 3.1:-78205503 | MS.gene06279:CDS |
| AAGGAACGAGTCGTAATCAT+TGG | 0.510752 | 3.1:+78199420 | None:intergenic |
| ACCGACAACATTGTGCAAAA+CGG | 0.532161 | 3.1:-78201273 | MS.gene06279:CDS |
| AGTATTCTAACTGGAATGGC+TGG | 0.533707 | 3.1:-78199797 | MS.gene06279:CDS |
| TCCATGCTTCAAGATGGTGC+TGG | 0.538157 | 3.1:-78205268 | MS.gene06279:CDS |
| CGACTCGTTCCTTACCATGA+AGG | 0.540033 | 3.1:-78199410 | MS.gene06279:intron |
| AATTCGCGTCAACAAACCAT+TGG | 0.553107 | 3.1:+78205528 | None:intergenic |
| GTAGAGTATTCTAACTGGAA+TGG | 0.554593 | 3.1:-78199801 | MS.gene06279:intron |
| CCATGCTTCAAGATGGTGCT+GGG | 0.558325 | 3.1:-78205267 | MS.gene06279:CDS |
| GTAGCTAACCTGAAGAGTAC+CGG | 0.562698 | 3.1:+78205144 | None:intergenic |
| TGTCGGTGAGCTTGTCCGTA+GGG | 0.566628 | 3.1:+78201289 | None:intergenic |
| CCTATGGTCTGTGTACTACC+AGG | 0.568324 | 3.1:+78199710 | None:intergenic |
| CCCAGCACCATCTTGAAGCA+TGG | 0.570105 | 3.1:+78205267 | None:intergenic |
| CCTGGTAGTACACAGACCAT+AGG | 0.574288 | 3.1:-78199710 | MS.gene06279:CDS |
| TTGTCGGTGAGCTTGTCCGT+AGG | 0.577098 | 3.1:+78201288 | None:intergenic |
| GGAACATCCATGCTTCAAGA+TGG | 0.598849 | 3.1:-78205274 | MS.gene06279:CDS |
| ATCACCTCCTGCAACCATTG+TGG | 0.602505 | 3.1:+78205680 | None:intergenic |
| TATGAATGGAGAGATCGTTA+GGG | 0.603650 | 3.1:-78201313 | MS.gene06279:CDS |
| AGAGATCGTTAGGGTCCCTA+CGG | 0.617275 | 3.1:-78201304 | MS.gene06279:CDS |
| ACTGAATATTGACAAACTGA+AGG | 0.623913 | 3.1:-78201208 | MS.gene06279:intron |
| GTGCAAAACGGTACTCACAA+CGG | 0.624848 | 3.1:-78201261 | MS.gene06279:CDS |
| GCGAAGTCATGTTTCCACAA+TGG | 0.642299 | 3.1:-78205694 | None:intergenic |
| GTTTGAGAATGGCAAGTGTG+GGG | 0.644680 | 3.1:-78205502 | MS.gene06279:intron |
| GTTTCCACAATGGTTGCAGG+AGG | 0.651802 | 3.1:-78205684 | MS.gene06279:CDS |
| GGTCTGTGTACTACCAGGAG+CGG | 0.685622 | 3.1:+78199715 | None:intergenic |
| TGGTAGTACACAGACCATAG+GGG | 0.703283 | 3.1:-78199708 | MS.gene06279:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATTTGATTAAGAAAAT+TGG | + | chr3.1:78202392-78202411 | None:intergenic | 10.0% |
| !!! | TTGTTTTTAATTTAAAAGTT+TGG | - | chr3.1:78201495-78201514 | MS.gene06279:intron | 10.0% |
| !! | AATAAACGTTAATTGAATAA+AGG | + | chr3.1:78204047-78204066 | None:intergenic | 15.0% |
| !! | AGAGAAGAAAAAAAAAATAT+GGG | + | chr3.1:78201102-78201121 | None:intergenic | 15.0% |
| !! | ATAAGAAAATAATTGTAGAA+AGG | + | chr3.1:78204321-78204340 | None:intergenic | 15.0% |
| !! | ATATAACTGAATAAGATTAT+AGG | - | chr3.1:78201662-78201681 | MS.gene06279:intron | 15.0% |
| !! | TATTTAATACATGATGAATT+TGG | + | chr3.1:78201355-78201374 | None:intergenic | 15.0% |
| !! | TTCTAAACCAATTAAAAAAA+AGG | + | chr3.1:78205297-78205316 | None:intergenic | 15.0% |
| !!! | AATTTTAGGGTTTATAAATT+AGG | + | chr3.1:78199537-78199556 | None:intergenic | 15.0% |
| !!! | ATATTTTTTTTTTCTTCTCT+GGG | - | chr3.1:78201102-78201121 | MS.gene06279:intron | 15.0% |
| !!! | GTGATTAGAATATTTTAAAA+TGG | - | chr3.1:78203952-78203971 | MS.gene06279:intron | 15.0% |
| !!! | TAATCAAATAATTGTTTTCT+TGG | - | chr3.1:78202399-78202418 | MS.gene06279:intron | 15.0% |
| !!! | TTTCTACAATTATTTTCTTA+TGG | - | chr3.1:78204320-78204339 | MS.gene06279:intron | 15.0% |
| !!! | TTTTTTTTTTTCAAGTATCA+TGG | + | chr3.1:78201703-78201722 | None:intergenic | 15.0% |
| !! | AAAATAACTATATGCATTCA+AGG | + | chr3.1:78200960-78200979 | None:intergenic | 20.0% |
| !! | AAACTTATACATAATCCAAA+AGG | + | chr3.1:78200319-78200338 | None:intergenic | 20.0% |
| !! | AACCTTAAATCTTTCAAATA+TGG | + | chr3.1:78200150-78200169 | None:intergenic | 20.0% |
| !! | AAGATGTTTGTGAATTATAT+TGG | - | chr3.1:78200502-78200521 | MS.gene06279:intron | 20.0% |
| !! | AATAAATAACATCACTAACT+TGG | + | chr3.1:78200274-78200293 | None:intergenic | 20.0% |
| !! | AATAATTGTGAGGTAATTAT+AGG | + | chr3.1:78202316-78202335 | None:intergenic | 20.0% |
| !! | AATTAAAAACAAAACAACAC+AGG | + | chr3.1:78201487-78201506 | None:intergenic | 20.0% |
| !! | AATTGTATTTGTAGTATTTG+AGG | - | chr3.1:78202467-78202486 | MS.gene06279:intron | 20.0% |
| !! | ATCGATAAAGGTAATTAATA+GGG | - | chr3.1:78203258-78203277 | MS.gene06279:intron | 20.0% |
| !! | ATTGAAATTCCTTCTTTATA+AGG | - | chr3.1:78201182-78201201 | MS.gene06279:intron | 20.0% |
| !! | CAAATCTATGAAATCAAAAT+TGG | - | chr3.1:78204227-78204246 | MS.gene06279:intron | 20.0% |
| !! | CAGAGAAGAAAAAAAAAATA+TGG | + | chr3.1:78201103-78201122 | None:intergenic | 20.0% |
| !! | CAGTTATATAGTTCTTATTA+AGG | + | chr3.1:78201651-78201670 | None:intergenic | 20.0% |
| !! | CTTTATCCCTTTAATATTTA+GGG | - | chr3.1:78200918-78200937 | MS.gene06279:intron | 20.0% |
| !! | GAATGATCTAATATTCAATT+TGG | + | chr3.1:78200398-78200417 | None:intergenic | 20.0% |
| !! | TATCGATAAAGGTAATTAAT+AGG | - | chr3.1:78203257-78203276 | MS.gene06279:intron | 20.0% |
| !! | TCTATCATAATCTACAAAAA+TGG | + | chr3.1:78203787-78203806 | None:intergenic | 20.0% |
| !! | TTCCATATTTGAAAGATTTA+AGG | - | chr3.1:78200145-78200164 | MS.gene06279:intron | 20.0% |
| !! | TTGAAATTCCTTCTTTATAA+GGG | - | chr3.1:78201183-78201202 | MS.gene06279:intron | 20.0% |
| !! | TTTCCTTATTCTTTCTAATA+AGG | - | chr3.1:78205321-78205340 | MS.gene06279:CDS | 20.0% |
| !!! | AAAATGTAATCGGAATTTTA+GGG | + | chr3.1:78199550-78199569 | None:intergenic | 20.0% |
| !!! | AAATTAGGTTTTACAAAGAT+AGG | + | chr3.1:78199522-78199541 | None:intergenic | 20.0% |
| !!! | AATCTGATTTTTGTAGTAAA+GGG | - | chr3.1:78201415-78201434 | MS.gene06279:intron | 20.0% |
| !!! | AATTAGGTTTTACAAAGATA+GGG | + | chr3.1:78199521-78199540 | None:intergenic | 20.0% |
| !!! | AGATAGATTATTGATTGATA+CGG | - | chr3.1:78203926-78203945 | MS.gene06279:intron | 20.0% |
| !!! | ATATTAGATCATTCTTTTCT+TGG | - | chr3.1:78200404-78200423 | MS.gene06279:intron | 20.0% |
| !!! | ATATTGATTGATGTGTTTTT+TGG | - | chr3.1:78203211-78203230 | MS.gene06279:intron | 20.0% |
| !!! | ATGATATGATTTTTTGTTGT+TGG | - | chr3.1:78200892-78200911 | MS.gene06279:intron | 20.0% |
| !!! | ATTTTATCACTATTATACGA+TGG | + | chr3.1:78204163-78204182 | None:intergenic | 20.0% |
| !!! | CAATTTTGATTTCATAGATT+TGG | + | chr3.1:78204229-78204248 | None:intergenic | 20.0% |
| !!! | CATATTTTTTTTTTCTTCTC+TGG | - | chr3.1:78201101-78201120 | MS.gene06279:intron | 20.0% |
| !!! | TAATCTGATTTTTGTAGTAA+AGG | - | chr3.1:78201414-78201433 | MS.gene06279:intron | 20.0% |
| !!! | TAGAAGACAAGATTTATTTT+AGG | + | chr3.1:78201041-78201060 | None:intergenic | 20.0% |
| !!! | TATCATTGTCTTTTCAATTA+AGG | - | chr3.1:78202144-78202163 | MS.gene06279:intron | 20.0% |
| !!! | TTTTCATTAGAACTAGAAAA+TGG | - | chr3.1:78200693-78200712 | MS.gene06279:intron | 20.0% |
| !!! | TTTTTTAATTGGTTTAGAAC+CGG | - | chr3.1:78205298-78205317 | MS.gene06279:CDS | 20.0% |
| ! | AAAAAAATCCTTAATTGCAC+AGG | - | chr3.1:78202652-78202671 | MS.gene06279:intron | 25.0% |
| ! | AAAAACATAAGCTACAAAAG+TGG | + | chr3.1:78205089-78205108 | None:intergenic | 25.0% |
| ! | AAAATGTGTGTTTATTGATG+TGG | - | chr3.1:78201235-78201254 | MS.gene06279:CDS | 25.0% |
| ! | AAAATTAAAATCTACGACGT+AGG | - | chr3.1:78200649-78200668 | MS.gene06279:intron | 25.0% |
| ! | AAATTAAAATCTACGACGTA+GGG | - | chr3.1:78200650-78200669 | MS.gene06279:intron | 25.0% |
| ! | AACCTAGTATCTTATAAAAC+AGG | - | chr3.1:78205615-78205634 | MS.gene06279:CDS | 25.0% |
| ! | AATTTCTTGATCAACTTCAT+AGG | + | chr3.1:78205677-78205696 | None:intergenic | 25.0% |
| ! | ACAATAATAATTCACCTATC+AGG | + | chr3.1:78204985-78205004 | None:intergenic | 25.0% |
| ! | ATATCATGTAGTTTCTTAAG+TGG | - | chr3.1:78199910-78199929 | MS.gene06279:intron | 25.0% |
| ! | ATCTATGAAATCAAAATTGG+AGG | - | chr3.1:78204230-78204249 | MS.gene06279:intron | 25.0% |
| ! | ATGTAATCAATTCTTTCATG+CGG | + | chr3.1:78201846-78201865 | None:intergenic | 25.0% |
| ! | ATTAGAAAGAATAAGGAAAC+CGG | + | chr3.1:78205320-78205339 | None:intergenic | 25.0% |
| ! | ATTATGATAGAATTGTTGCT+TGG | - | chr3.1:78203796-78203815 | MS.gene06279:intron | 25.0% |
| ! | ATTGAAAGTAAATAACTAGC+AGG | + | chr3.1:78202216-78202235 | None:intergenic | 25.0% |
| ! | CTCATTCCCTAAATATTAAA+GGG | + | chr3.1:78200927-78200946 | None:intergenic | 25.0% |
| ! | CTGATAGTTGAAACATATAT+GGG | - | chr3.1:78203186-78203205 | MS.gene06279:intron | 25.0% |
| ! | GCAAATTATAATTCATGCAT+AGG | + | chr3.1:78200826-78200845 | None:intergenic | 25.0% |
| ! | GCTTTATCCCTTTAATATTT+AGG | - | chr3.1:78200917-78200936 | MS.gene06279:intron | 25.0% |
| ! | TAATTTCAAAACCAGTAAAC+TGG | - | chr3.1:78205267-78205286 | MS.gene06279:CDS | 25.0% |
| ! | TATAGAAAAGCTATCCTTTA+AGG | + | chr3.1:78202611-78202630 | None:intergenic | 25.0% |
| ! | TCAATTTCGACAACTAATAT+AGG | - | chr3.1:78204354-78204373 | MS.gene06279:intron | 25.0% |
| ! | TCTCATTCCCTAAATATTAA+AGG | + | chr3.1:78200928-78200947 | None:intergenic | 25.0% |
| ! | TGAAATTCTAATTCCTAACT+CGG | + | chr3.1:78199958-78199977 | None:intergenic | 25.0% |
| ! | TTACAAATCCCTTATAAAGA+AGG | + | chr3.1:78201194-78201213 | None:intergenic | 25.0% |
| ! | TTTAATATGACAGACTACAA+AGG | + | chr3.1:78201891-78201910 | None:intergenic | 25.0% |
| ! | TTTATAAGGGATTTGTAAGT+TGG | - | chr3.1:78201196-78201215 | MS.gene06279:intron | 25.0% |
| ! | TTTATGTTTAATGTTGAGAG+TGG | - | chr3.1:78204478-78204497 | MS.gene06279:intron | 25.0% |
| !! | AAAAGGTATAGGAATTCAAT+TGG | - | chr3.1:78202694-78202713 | MS.gene06279:intron | 25.0% |
| !! | AAAGGTATAGGAATTCAATT+GGG | - | chr3.1:78202695-78202714 | MS.gene06279:intron | 25.0% |
| !! | AAATTTTTGCTTCTACCTTT+TGG | - | chr3.1:78200301-78200320 | MS.gene06279:intron | 25.0% |
| !! | ATAAGTACAATCAGATTTTG+CGG | - | chr3.1:78201001-78201020 | MS.gene06279:intron | 25.0% |
| !! | ATCCTGTTTTATAAGATACT+AGG | + | chr3.1:78205620-78205639 | None:intergenic | 25.0% |
| !! | CAAAATGTAATCGGAATTTT+AGG | + | chr3.1:78199551-78199570 | None:intergenic | 25.0% |
| !! | TACTATCAGCATTTTACAAT+TGG | + | chr3.1:78200006-78200025 | None:intergenic | 25.0% |
| !! | TAGCTTTTCTATATAAGTCA+TGG | - | chr3.1:78202618-78202637 | MS.gene06279:intron | 25.0% |
| !! | TATTTCTATGTACCTTGTTA+TGG | - | chr3.1:78201747-78201766 | MS.gene06279:intron | 25.0% |
| !! | TTCTAATTTTCCATGAAGTT+TGG | - | chr3.1:78201056-78201075 | MS.gene06279:intron | 25.0% |
| !! | TTTGGAAAAGTGTAGTAATT+CGG | + | chr3.1:78204211-78204230 | None:intergenic | 25.0% |
| !!! | AAAACAGGATGATGTTTTTT+TGG | - | chr3.1:78205630-78205649 | MS.gene06279:CDS | 25.0% |
| !!! | ATATGATTTTTTGTTGTTGG+AGG | - | chr3.1:78200895-78200914 | MS.gene06279:intron | 25.0% |
| !!! | CTCTGCTTTTAGTTAATTAA+TGG | + | chr3.1:78203441-78203460 | None:intergenic | 25.0% |
| !!! | TGATCTTTTTCATAAATTCC+TGG | - | chr3.1:78202866-78202885 | MS.gene06279:intron | 25.0% |
| !!! | TGGTGAACCTTTTTTTTAAT+TGG | - | chr3.1:78205287-78205306 | MS.gene06279:CDS | 25.0% |
| !!! | TTACTTCTTTTTCAGAACAT+AGG | - | chr3.1:78203581-78203600 | MS.gene06279:intron | 25.0% |
| !!! | TTCAAAAGAATGCATTGATT+CGG | + | chr3.1:78199760-78199779 | None:intergenic | 25.0% |
| AAATTAAACACTTACCCCTA+TGG | + | chr3.1:78205253-78205272 | None:intergenic | 30.0% | |
| AACATCAAAAACAGGATGTA+TGG | + | chr3.1:78203997-78204016 | None:intergenic | 30.0% | |
| AACTCAAAGTGTAGGAAAAT+TGG | + | chr3.1:78202244-78202263 | None:intergenic | 30.0% | |
| AAGATCAATTTCCCTTTCAA+TGG | + | chr3.1:78202853-78202872 | None:intergenic | 30.0% | |
| ACTGAATATTGACAAACTGA+AGG | - | chr3.1:78203736-78203755 | MS.gene06279:intron | 30.0% | |
| ACTTCACTTATGCTAGAAAA+AGG | + | chr3.1:78201332-78201351 | None:intergenic | 30.0% | |
| ACTTTATGTTCCTGATAGAA+TGG | - | chr3.1:78204431-78204450 | MS.gene06279:intron | 30.0% | |
| AGAAAAACCAAAAAGACGTA+CGG | + | chr3.1:78199610-78199629 | None:intergenic | 30.0% | |
| AGCAGAGACAATTTATACTA+GGG | + | chr3.1:78200373-78200392 | None:intergenic | 30.0% | |
| AGGTGAATTATTATTGTGAC+TGG | - | chr3.1:78204988-78205007 | MS.gene06279:intron | 30.0% | |
| ATCAAAGCATGACATTCAAA+TGG | + | chr3.1:78200466-78200485 | None:intergenic | 30.0% | |
| ATCCAAGCTAATTTCATTGA+TGG | - | chr3.1:78205468-78205487 | MS.gene06279:intron | 30.0% | |
| ATCTGACAAAATGTAACAAG+AGG | + | chr3.1:78199483-78199502 | None:intergenic | 30.0% | |
| ATGAAATCAAAATTGGAGGT+AGG | - | chr3.1:78204234-78204253 | MS.gene06279:intron | 30.0% | |
| ATGTGTATACCAGTAGTATT+GGG | - | chr3.1:78202726-78202745 | MS.gene06279:intron | 30.0% | |
| ATTATAGTTGTGCTAGAGAA+AGG | + | chr3.1:78202013-78202032 | None:intergenic | 30.0% | |
| ATTCACAAACATCTTACCAA+TGG | + | chr3.1:78200497-78200516 | None:intergenic | 30.0% | |
| CTTCTATTCTCTATGTTTGA+AGG | + | chr3.1:78203908-78203927 | None:intergenic | 30.0% | |
| CTTTATGTTCCTGATAGAAT+GGG | - | chr3.1:78204432-78204451 | MS.gene06279:intron | 30.0% | |
| GAGAATTACATTTGCATTTC+AGG | + | chr3.1:78202945-78202964 | None:intergenic | 30.0% | |
| GATTAAGAAAATTGGATCAC+AGG | + | chr3.1:78202384-78202403 | None:intergenic | 30.0% | |
| GATTATTGTGAGGATGTATA+CGG | - | chr3.1:78204761-78204780 | MS.gene06279:intron | 30.0% | |
| GCTGATAGTTGAAACATATA+TGG | - | chr3.1:78203185-78203204 | MS.gene06279:intron | 30.0% | |
| GGTTGTATTCACATTTAAGA+TGG | - | chr3.1:78203346-78203365 | MS.gene06279:intron | 30.0% | |
| GTCACGATTAATTTCCTTAA+AGG | - | chr3.1:78202594-78202613 | MS.gene06279:intron | 30.0% | |
| GTTTCATGAAAAAGTAATCC+AGG | + | chr3.1:78202887-78202906 | None:intergenic | 30.0% | |
| TACACGTGTTATAATTTGGT+TGG | + | chr3.1:78204022-78204041 | None:intergenic | 30.0% | |
| TAGCAGAGACAATTTATACT+AGG | + | chr3.1:78200374-78200393 | None:intergenic | 30.0% | |
| TATCAGTTCACTTAACAGAT+AGG | - | chr3.1:78202818-78202837 | MS.gene06279:intron | 30.0% | |
| TATGTGTATACCAGTAGTAT+TGG | - | chr3.1:78202725-78202744 | MS.gene06279:intron | 30.0% | |
| TCAATATTCAGTTTCTCAAC+TGG | + | chr3.1:78203728-78203747 | None:intergenic | 30.0% | |
| TCAGAATGGCATCATTAATT+TGG | - | chr3.1:78203824-78203843 | MS.gene06279:intron | 30.0% | |
| TCCAATGTATTACATTGAGT+AGG | + | chr3.1:78202342-78202361 | None:intergenic | 30.0% | |
| TCCTACTCAATGTAATACAT+TGG | - | chr3.1:78202338-78202357 | MS.gene06279:intron | 30.0% | |
| TGAAGGTAAAATAGTGTTTC+TGG | - | chr3.1:78205551-78205570 | MS.gene06279:CDS | 30.0% | |
| TGACAAAAATCCAAACTTCA+TGG | + | chr3.1:78201069-78201088 | None:intergenic | 30.0% | |
| TTATCACTATTATACGATGG+AGG | + | chr3.1:78204160-78204179 | None:intergenic | 30.0% | |
| TTTCTTAAGTGGTAACCTAA+GGG | - | chr3.1:78199921-78199940 | MS.gene06279:intron | 30.0% | |
| ! | AAAAGTGTAGTAATTCGGAA+GGG | + | chr3.1:78204206-78204225 | None:intergenic | 30.0% |
| ! | ACAGGTTGAATCTTTAATTG+TGG | + | chr3.1:78202366-78202385 | None:intergenic | 30.0% |
| ! | ACGCCTTATTAGAAAGAATA+AGG | + | chr3.1:78205327-78205346 | None:intergenic | 30.0% |
| ! | ACTATTTTACCTTCATGGTA+AGG | + | chr3.1:78205546-78205565 | None:intergenic | 30.0% |
| ! | AGATTATTGATTGATACGGT+TGG | - | chr3.1:78203930-78203949 | MS.gene06279:intron | 30.0% |
| ! | CTTTTTGCATACATATAGTG+AGG | - | chr3.1:78202058-78202077 | MS.gene06279:intron | 30.0% |
| ! | GAAACACTATTTTACCTTCA+TGG | + | chr3.1:78205551-78205570 | None:intergenic | 30.0% |
| ! | GCTTTGATACAATTTTCCAT+TGG | - | chr3.1:78200478-78200497 | MS.gene06279:intron | 30.0% |
| ! | TCAACTTAAAGTTGATCACT+TGG | + | chr3.1:78203125-78203144 | None:intergenic | 30.0% |
| ! | TCAATGAAATTAGCTTGGAT+TGG | + | chr3.1:78205468-78205487 | None:intergenic | 30.0% |
| ! | TCATTGTAGAGTATTCTAAC+TGG | - | chr3.1:78205138-78205157 | MS.gene06279:intron | 30.0% |
| ! | TTTGGATTTTTGTCAGTTGT+GGG | - | chr3.1:78201074-78201093 | MS.gene06279:intron | 30.0% |
| !! | ACTGCTTAACTAATTTTGGT+GGG | + | chr3.1:78203418-78203437 | None:intergenic | 30.0% |
| !! | ATGGACTGCTTAACTAATTT+TGG | + | chr3.1:78203422-78203441 | None:intergenic | 30.0% |
| !! | GATTCTGAGATATAGCTAAT+TGG | + | chr3.1:78203853-78203872 | None:intergenic | 30.0% |
| !! | TGTAATTGATAGTGTCTCTA+TGG | + | chr3.1:78202909-78202928 | None:intergenic | 30.0% |
| !! | TGTAGAAATCCAGTTTTATC+AGG | - | chr3.1:78201443-78201462 | MS.gene06279:intron | 30.0% |
| !!! | TTCTTTTTCAGAACATAGGA+TGG | - | chr3.1:78203585-78203604 | MS.gene06279:intron | 30.0% |
| !!! | TTGATTGATGTGTTTTTTGG+TGG | - | chr3.1:78203214-78203233 | MS.gene06279:intron | 30.0% |
| AAAAAGGTTCACCAGTTTAC+TGG | + | chr3.1:78205281-78205300 | None:intergenic | 35.0% | |
| AAATCAAAATTGGAGGTAGG+CGG | - | chr3.1:78204237-78204256 | MS.gene06279:intron | 35.0% | |
| ACAACGTGTTGCAATTTGAA+TGG | + | chr3.1:78203078-78203097 | None:intergenic | 35.0% | |
| ACTGTCATGCAATTATCAAG+AGG | - | chr3.1:78202790-78202809 | MS.gene06279:intron | 35.0% | |
| AGAAGGAGAGATGACATTAA+TGG | - | chr3.1:78204856-78204875 | MS.gene06279:intron | 35.0% | |
| AGGATAGAAACTCAAAGTGT+AGG | + | chr3.1:78202252-78202271 | None:intergenic | 35.0% | |
| ATAGGCGTGCTTAATATGTA+TGG | - | chr3.1:78202983-78203002 | MS.gene06279:intron | 35.0% | |
| ATCGCACACATTACATGATA+AGG | + | chr3.1:78202272-78202291 | None:intergenic | 35.0% | |
| ATCTTTGTTCATGGGATTTC+AGG | - | chr3.1:78199299-78199318 | MS.gene06279:CDS | 35.0% | |
| ATGGAATACCTGTGCAATTA+AGG | + | chr3.1:78202663-78202682 | None:intergenic | 35.0% | |
| ATGTTTGAAGGTTAATGACC+AGG | + | chr3.1:78203896-78203915 | None:intergenic | 35.0% | |
| ATTCAAATGGCAACCAAACT+AGG | + | chr3.1:78200453-78200472 | None:intergenic | 35.0% | |
| CACCATCAATGAAATTAGCT+TGG | + | chr3.1:78205473-78205492 | None:intergenic | 35.0% | |
| CAGATATGAATACACACATG+TGG | - | chr3.1:78201599-78201618 | MS.gene06279:intron | 35.0% | |
| CAGTTACGATCTTTGTTCAT+GGG | - | chr3.1:78199291-78199310 | MS.gene06279:CDS | 35.0% | |
| CATTTATGACACACACCTAT+AGG | - | chr3.1:78202965-78202984 | MS.gene06279:intron | 35.0% | |
| CCTGTGACACAAAATGTAAT+CGG | + | chr3.1:78199560-78199579 | None:intergenic | 35.0% | |
| CTATAGGTGTGTGTCATAAA+TGG | + | chr3.1:78202967-78202986 | None:intergenic | 35.0% | |
| GAAGGAGAGATGACATTAAT+GGG | - | chr3.1:78204857-78204876 | MS.gene06279:intron | 35.0% | |
| GACAACTAATATAGGTGACT+GGG | - | chr3.1:78204362-78204381 | MS.gene06279:intron | 35.0% | |
| GAGTAGGAGTAATAATTGTG+AGG | + | chr3.1:78202326-78202345 | None:intergenic | 35.0% | |
| GCAATGCAATGAAAAACTGA+AGG | - | chr3.1:78204404-78204423 | MS.gene06279:intron | 35.0% | |
| GCATTAAATCATTCAGCTGT+TGG | + | chr3.1:78203056-78203075 | None:intergenic | 35.0% | |
| GGAGTACACGTGTTATAATT+TGG | + | chr3.1:78204026-78204045 | None:intergenic | 35.0% | |
| GTACTTCTTGATCCATAACA+AGG | + | chr3.1:78201762-78201781 | None:intergenic | 35.0% | |
| GTGTTAGAGTGACTCAAATT+AGG | - | chr3.1:78205037-78205056 | MS.gene06279:intron | 35.0% | |
| GTTAAATTGCCCAATACTAC+TGG | + | chr3.1:78202738-78202757 | None:intergenic | 35.0% | |
| GTTGCTTGGTATAATCAGAA+TGG | - | chr3.1:78203810-78203829 | MS.gene06279:intron | 35.0% | |
| GTTTCTTAAGTGGTAACCTA+AGG | - | chr3.1:78199920-78199939 | MS.gene06279:intron | 35.0% | |
| TAATGTGGACTCTTTGCTAA+GGG | - | chr3.1:78203325-78203344 | MS.gene06279:intron | 35.0% | |
| TACATATTAAGCACGCCTAT+AGG | + | chr3.1:78202983-78203002 | None:intergenic | 35.0% | |
| TATGAATGGAGAGATCGTTA+GGG | - | chr3.1:78203631-78203650 | MS.gene06279:intron | 35.0% | |
| TCAGTTACGATCTTTGTTCA+TGG | - | chr3.1:78199290-78199309 | MS.gene06279:CDS | 35.0% | |
| TCTTCAGTTCGACTTATGAA+TGG | - | chr3.1:78203617-78203636 | MS.gene06279:intron | 35.0% | |
| TGAAATCCTCGCAATAAGAA+AGG | - | chr3.1:78200074-78200093 | MS.gene06279:intron | 35.0% | |
| TTAATGTGGACTCTTTGCTA+AGG | - | chr3.1:78203324-78203343 | MS.gene06279:intron | 35.0% | |
| TTAGAGTGACTCAAATTAGG+TGG | - | chr3.1:78205040-78205059 | MS.gene06279:intron | 35.0% | |
| TTATGAATGGAGAGATCGTT+AGG | - | chr3.1:78203630-78203649 | MS.gene06279:intron | 35.0% | |
| TTCATGCATAGGTAAAACAG+TGG | + | chr3.1:78200815-78200834 | None:intergenic | 35.0% | |
| TTCTTTCATGCGGACATAAA+AGG | + | chr3.1:78201836-78201855 | None:intergenic | 35.0% | |
| TTGGCTGCAAATGAGTTTAA+CGG | + | chr3.1:78204540-78204559 | None:intergenic | 35.0% | |
| ! | AACAAACTTGGTGGGAAAAA+TGG | + | chr3.1:78203534-78203553 | None:intergenic | 35.0% |
| ! | AGACAAAATTGTGCTTTTCC+TGG | - | chr3.1:78203875-78203894 | MS.gene06279:intron | 35.0% |
| ! | CAATACCAAGAGTTTTTGTC+AGG | - | chr3.1:78203285-78203304 | MS.gene06279:intron | 35.0% |
| ! | CGATTACATTTTGTGTCACA+GGG | - | chr3.1:78199558-78199577 | MS.gene06279:intron | 35.0% |
| ! | GAAAAGTGTAGTAATTCGGA+AGG | + | chr3.1:78204207-78204226 | None:intergenic | 35.0% |
| ! | GACTGCTTAACTAATTTTGG+TGG | + | chr3.1:78203419-78203438 | None:intergenic | 35.0% |
| ! | GGTTTTACAAAGATAGGGTT+TGG | + | chr3.1:78199516-78199535 | None:intergenic | 35.0% |
| ! | GGTTTTTCTGAACAACTATG+TGG | - | chr3.1:78199621-78199640 | MS.gene06279:intron | 35.0% |
| ! | GTAGAGTATTCTAACTGGAA+TGG | - | chr3.1:78205143-78205162 | MS.gene06279:intron | 35.0% |
| ! | GTTTGGATTTTTGTCAGTTG+TGG | - | chr3.1:78201073-78201092 | MS.gene06279:intron | 35.0% |
| ! | TCCTATACCTTTTGTATCGA+TGG | + | chr3.1:78202687-78202706 | None:intergenic | 35.0% |
| ! | TTGTATACCGTACGTCTTTT+TGG | - | chr3.1:78199600-78199619 | MS.gene06279:intron | 35.0% |
| ! | TTTTCATGGGATTTCAGGAT+TGG | - | chr3.1:78199355-78199374 | MS.gene06279:intron | 35.0% |
| !! | AATTGGCTTAGGGTTTTCAT+GGG | - | chr3.1:78199342-78199361 | MS.gene06279:intron | 35.0% |
| !! | AATTTCATTGATGGTGTTGC+AGG | - | chr3.1:78205477-78205496 | MS.gene06279:intron | 35.0% |
| !! | ATAGCTTGTTTATAGCCTGT+TGG | - | chr3.1:78204661-78204680 | MS.gene06279:intron | 35.0% |
| !! | CTGCTTAACTAATTTTGGTG+GGG | + | chr3.1:78203417-78203436 | None:intergenic | 35.0% |
| !! | GCACACGATTACTTTTAACA+TGG | - | chr3.1:78201968-78201987 | MS.gene06279:intron | 35.0% |
| !! | GTTATAGTTTTACTGCAGAG+TGG | - | chr3.1:78201527-78201546 | MS.gene06279:intron | 35.0% |
| !!! | ATTTGCTAGTTTTTCCTTCC+AGG | - | chr3.1:78200777-78200796 | MS.gene06279:intron | 35.0% |
| !!! | TGCATTCTTTTGAAACACGA+CGG | - | chr3.1:78199766-78199785 | MS.gene06279:CDS | 35.0% |
| !!! | TGTTTTTTGAGTGCCTAGTT+TGG | - | chr3.1:78200437-78200456 | MS.gene06279:intron | 35.0% |
| AAAGGTAGAGACCTAACAGA+AGG | + | chr3.1:78204303-78204322 | None:intergenic | 40.0% | |
| AACTAGCAGGAAAATTGAGC+AGG | + | chr3.1:78202203-78202222 | None:intergenic | 40.0% | |
| AAGCCAATTGTTTCCTCGTT+TGG | + | chr3.1:78200735-78200754 | None:intergenic | 40.0% | |
| AAGCTATGAACACACCTGAA+TGG | + | chr3.1:78204648-78204667 | None:intergenic | 40.0% | |
| AAGGAACGAGTCGTAATCAT+TGG | + | chr3.1:78205527-78205546 | None:intergenic | 40.0% | |
| AATTCGCGTCAACAAACCAT+TGG | + | chr3.1:78199419-78199438 | None:intergenic | 40.0% | |
| ACCGACAACATTGTGCAAAA+CGG | - | chr3.1:78203671-78203690 | MS.gene06279:intron | 40.0% | |
| ACTGGAAGTAGAATCAAAGG+AGG | - | chr3.1:78205006-78205025 | MS.gene06279:intron | 40.0% | |
| AGCAACCTGACAAAAACTCT+TGG | + | chr3.1:78203293-78203312 | None:intergenic | 40.0% | |
| AGTATTCTAACTGGAATGGC+TGG | - | chr3.1:78205147-78205166 | MS.gene06279:intron | 40.0% | |
| AGTCCAAACGAGGAAACAAT+TGG | - | chr3.1:78200729-78200748 | MS.gene06279:intron | 40.0% | |
| AGTTTGTGTCAACAGAAGAG+TGG | - | chr3.1:78204687-78204706 | MS.gene06279:intron | 40.0% | |
| ATGGGAGTAGGATTATAGAC+AGG | - | chr3.1:78204875-78204894 | MS.gene06279:intron | 40.0% | |
| ATGTTCCTGATAGAATGGGT+TGG | - | chr3.1:78204436-78204455 | MS.gene06279:intron | 40.0% | |
| ATTAGTGTGTCTGTATGCGT+AGG | + | chr3.1:78203508-78203527 | None:intergenic | 40.0% | |
| CGACAACTAATATAGGTGAC+TGG | - | chr3.1:78204361-78204380 | MS.gene06279:intron | 40.0% | |
| CTCTCATTGACAACAAGACT+TGG | + | chr3.1:78204597-78204616 | None:intergenic | 40.0% | |
| CTGAACAACTATGTGGACTT+TGG | - | chr3.1:78199628-78199647 | MS.gene06279:intron | 40.0% | |
| CTGGAAGTAGAATCAAAGGA+GGG | - | chr3.1:78205007-78205026 | MS.gene06279:intron | 40.0% | |
| GACTTTGGCAAGATGTTTAC+CGG | - | chr3.1:78199643-78199662 | MS.gene06279:intron | 40.0% | |
| GAGATGACATTAATGGGAGT+AGG | - | chr3.1:78204863-78204882 | MS.gene06279:intron | 40.0% | |
| GCTAACTGGTGTGATTAATG+TGG | - | chr3.1:78203310-78203329 | MS.gene06279:intron | 40.0% | |
| GCTTTCGGGGTTAAAAAAGA+CGG | - | chr3.1:78204512-78204531 | MS.gene06279:intron | 40.0% | |
| GGCAAGAAGAACAGAAAGAT+TGG | + | chr3.1:78201870-78201889 | None:intergenic | 40.0% | |
| GGTTCATGGGATTTCAGAAT+TGG | - | chr3.1:78199325-78199344 | MS.gene06279:intron | 40.0% | |
| GGTTGGAGAACATCAAAAAC+AGG | + | chr3.1:78204005-78204024 | None:intergenic | 40.0% | |
| GTGACTGGAAGTAGAATCAA+AGG | - | chr3.1:78205003-78205022 | MS.gene06279:intron | 40.0% | |
| GTGCATGGGTATATCGATAA+AGG | - | chr3.1:78203246-78203265 | MS.gene06279:intron | 40.0% | |
| GTTTGTGTCAACAGAAGAGT+GGG | - | chr3.1:78204688-78204707 | MS.gene06279:intron | 40.0% | |
| TCACTATTATACGATGGAGG+AGG | + | chr3.1:78204157-78204176 | None:intergenic | 40.0% | |
| TCCTCACAATAATCACTCCA+TGG | + | chr3.1:78204755-78204774 | None:intergenic | 40.0% | |
| TGAATACACACATGTGGACA+TGG | - | chr3.1:78201605-78201624 | MS.gene06279:intron | 40.0% | |
| TGCACTAGATACTCTAGATC+AGG | + | chr3.1:78200183-78200202 | None:intergenic | 40.0% | |
| TGTTCATGGGATTTCAGGAT+TGG | - | chr3.1:78199304-78199323 | MS.gene06279:CDS | 40.0% | |
| TTATCAGGTGCCTCTTAATG+AGG | - | chr3.1:78201458-78201477 | MS.gene06279:intron | 40.0% | |
| TTCCATGCCATCGATACAAA+AGG | - | chr3.1:78202677-78202696 | MS.gene06279:intron | 40.0% | |
| TTGACACAAACTGAACCAAC+AGG | + | chr3.1:78204679-78204698 | None:intergenic | 40.0% | |
| ! | ACCGTTTTGCACAATGTTGT+CGG | + | chr3.1:78203675-78203694 | None:intergenic | 40.0% |
| ! | CCGATTACATTTTGTGTCAC+AGG | - | chr3.1:78199557-78199576 | MS.gene06279:intron | 40.0% |
| ! | GCCATCGATACAAAAGGTAT+AGG | - | chr3.1:78202683-78202702 | MS.gene06279:intron | 40.0% |
| ! | GGGATTTCAGAATTGGCTTA+GGG | - | chr3.1:78199332-78199351 | MS.gene06279:intron | 40.0% |
| ! | GTTTGTTGAGTGTGAGTTAG+AGG | - | chr3.1:78204947-78204966 | MS.gene06279:intron | 40.0% |
| ! | TAGGGTTTTCATGGGATTTC+AGG | - | chr3.1:78199350-78199369 | MS.gene06279:intron | 40.0% |
| ! | TGGGATTTCAGAATTGGCTT+AGG | - | chr3.1:78199331-78199350 | MS.gene06279:intron | 40.0% |
| ! | TTAGGGTTTTCATGCTCCAA+TGG | - | chr3.1:78199400-78199419 | MS.gene06279:intron | 40.0% |
| !! | ATCAGATTTTGCGGCATTGA+TGG | - | chr3.1:78201010-78201029 | MS.gene06279:intron | 40.0% |
| !! | ATGGTTTGTTGACGCGAATT+TGG | - | chr3.1:78199419-78199438 | MS.gene06279:CDS | 40.0% |
| !! | CTCTCTAGTCATTTTGAGCT+TGG | + | chr3.1:78199731-78199750 | None:intergenic | 40.0% |
| !! | GAATTGGCTTAGGGTTTTCA+TGG | - | chr3.1:78199341-78199360 | MS.gene06279:intron | 40.0% |
| !! | GGATTTCAGGATTGGTTCAT+GGG | - | chr3.1:78199312-78199331 | MS.gene06279:intron | 40.0% |
| !! | GTTTTTGTCAGGTTGCTAAC+TGG | - | chr3.1:78203296-78203315 | MS.gene06279:intron | 40.0% |
| !! | TAAGAGGCACCTGATAAAAC+TGG | + | chr3.1:78201455-78201474 | None:intergenic | 40.0% |
| !! | TACCTTTTGTATCGATGGCA+TGG | + | chr3.1:78202682-78202701 | None:intergenic | 40.0% |
| !! | TCTAGTCATTTTGAGCTTGG+CGG | + | chr3.1:78199728-78199747 | None:intergenic | 40.0% |
| !! | TGGTTTGTTGACGCGAATTT+GGG | - | chr3.1:78199420-78199439 | MS.gene06279:CDS | 40.0% |
| AAGCATGGATGTTCCCATTC+CGG | + | chr3.1:78199665-78199684 | None:intergenic | 45.0% | |
| AAGTGTCTGAACCTGAAGAG+GGG | - | chr3.1:78204903-78204922 | MS.gene06279:intron | 45.0% | |
| ACACAGGTTGCCTCATTAAG+AGG | + | chr3.1:78201471-78201490 | None:intergenic | 45.0% | |
| ACAGAGGAAGAGACAGAAGT+AGG | - | chr3.1:78204805-78204824 | MS.gene06279:intron | 45.0% | |
| AGCCAATAGCATGTCTTCCT+GGG | - | chr3.1:78204554-78204573 | MS.gene06279:intron | 45.0% | |
| AGGCGTACATGTCCATTGAA+AGG | - | chr3.1:78202838-78202857 | MS.gene06279:intron | 45.0% | |
| AGTTTAGTACCTTTACCCCC+AGG | + | chr3.1:78204574-78204593 | None:intergenic | 45.0% | |
| ATAATCACTCCATGGCAACC+AGG | + | chr3.1:78204747-78204766 | None:intergenic | 45.0% | |
| CAACACTAGTAAGCGAGTCA+TGG | + | chr3.1:78204070-78204089 | None:intergenic | 45.0% | |
| CTGGTAGTACACAGACCATA+GGG | - | chr3.1:78205235-78205254 | MS.gene06279:CDS | 45.0% | |
| CTGTCACCTTTCTTATTGCG+AGG | + | chr3.1:78200083-78200102 | None:intergenic | 45.0% | |
| GCCATGGAGTGATTATTGTG+AGG | - | chr3.1:78204751-78204770 | MS.gene06279:intron | 45.0% | |
| GGAACATCCATGCTTCAAGA+TGG | - | chr3.1:78199670-78199689 | MS.gene06279:intron | 45.0% | |
| GGCAAGATGTTTACCGGAAT+GGG | - | chr3.1:78199649-78199668 | MS.gene06279:intron | 45.0% | |
| GGCGTACATGTCCATTGAAA+GGG | - | chr3.1:78202839-78202858 | MS.gene06279:intron | 45.0% | |
| GGGTGATTGTGATGAGTTTC+AGG | - | chr3.1:78204923-78204942 | MS.gene06279:intron | 45.0% | |
| GGGTGCTTCAATTGTGCTAT+GGG | - | chr3.1:78204106-78204125 | MS.gene06279:intron | 45.0% | |
| GGTAGTACTGTTTCCGAGTT+AGG | - | chr3.1:78199942-78199961 | MS.gene06279:intron | 45.0% | |
| GGTGGGGTCAATGAACAAAA+TGG | + | chr3.1:78203401-78203420 | None:intergenic | 45.0% | |
| GGTTTGAGAATGGCAAGTGT+GGG | - | chr3.1:78199441-78199460 | MS.gene06279:CDS | 45.0% | |
| GTAGAATCAAAGGAGGGATG+AGG | - | chr3.1:78205013-78205032 | MS.gene06279:intron | 45.0% | |
| GTGCAAAACGGTACTCACAA+CGG | - | chr3.1:78203683-78203702 | MS.gene06279:intron | 45.0% | |
| GTGGAGACAAGTTACGCTTT+CGG | - | chr3.1:78204497-78204516 | MS.gene06279:intron | 45.0% | |
| GTTGCCTATCTCTGCTTCAA+GGG | - | chr3.1:78204086-78204105 | MS.gene06279:intron | 45.0% | |
| GTTTGAGAATGGCAAGTGTG+GGG | - | chr3.1:78199442-78199461 | MS.gene06279:CDS | 45.0% | |
| TAATCACTCCATGGCAACCA+GGG | + | chr3.1:78204746-78204765 | None:intergenic | 45.0% | |
| TCCTTCCAACCCATTCTATC+AGG | + | chr3.1:78204444-78204463 | None:intergenic | 45.0% | |
| TCGGAAACAGTACTACCCTT+AGG | + | chr3.1:78199939-78199958 | None:intergenic | 45.0% | |
| TGCAAAACGGTACTCACAAC+GGG | - | chr3.1:78203684-78203703 | MS.gene06279:intron | 45.0% | |
| TGGAGACAAGTTACGCTTTC+GGG | - | chr3.1:78204498-78204517 | MS.gene06279:intron | 45.0% | |
| TGGCAAGATGTTTACCGGAA+TGG | - | chr3.1:78199648-78199667 | MS.gene06279:intron | 45.0% | |
| TGGTAGTACACAGACCATAG+GGG | - | chr3.1:78205236-78205255 | MS.gene06279:CDS | 45.0% | |
| TGTTGCCTATCTCTGCTTCA+AGG | - | chr3.1:78204085-78204104 | MS.gene06279:intron | 45.0% | |
| TTAACTCTGCAGTCCAAACG+AGG | - | chr3.1:78200719-78200738 | MS.gene06279:intron | 45.0% | |
| TTGTGAGGATGTATACGGTG+AGG | - | chr3.1:78204766-78204785 | MS.gene06279:intron | 45.0% | |
| ! | ACATTTTGTGTCACAGGGCA+TGG | - | chr3.1:78199563-78199582 | MS.gene06279:intron | 45.0% |
| ! | AGGGTGCTTCAATTGTGCTA+TGG | - | chr3.1:78204105-78204124 | MS.gene06279:intron | 45.0% |
| ! | CAGTGGCGTAAATTTTCTCC+TGG | + | chr3.1:78200798-78200817 | None:intergenic | 45.0% |
| ! | CGCGAATTTGGGTTTGAGAA+TGG | - | chr3.1:78199431-78199450 | MS.gene06279:CDS | 45.0% |
| ! | GAAGTGTCTGAACCTGAAGA+GGG | - | chr3.1:78204902-78204921 | MS.gene06279:intron | 45.0% |
| ! | GGCGTAAATTTTCTCCTGGA+AGG | + | chr3.1:78200794-78200813 | None:intergenic | 45.0% |
| ! | GTAGCTAACCTGAAGAGTAC+CGG | + | chr3.1:78199803-78199822 | None:intergenic | 45.0% |
| ! | TACAATCCCATGTTTTCCCC+TGG | - | chr3.1:78204726-78204745 | MS.gene06279:intron | 45.0% |
| !! | AATGGGTTGGAAGGATCTTG+TGG | - | chr3.1:78204449-78204468 | MS.gene06279:intron | 45.0% |
| !! | AGAAGTGTCTGAACCTGAAG+AGG | - | chr3.1:78204901-78204920 | MS.gene06279:intron | 45.0% |
| !! | GGGATTTCAGGATTGGTTCA+TGG | - | chr3.1:78199311-78199330 | MS.gene06279:intron | 45.0% |
| !! | TCCTGATAGAATGGGTTGGA+AGG | - | chr3.1:78204440-78204459 | MS.gene06279:intron | 45.0% |
| AAGGTGAGCGGAAGGGTAAT+TGG | + | chr3.1:78204284-78204303 | None:intergenic | 50.0% | |
| AATCACTCCATGGCAACCAG+GGG | + | chr3.1:78204745-78204764 | None:intergenic | 50.0% | |
| AGAGATCGTTAGGGTCCCTA+CGG | - | chr3.1:78203640-78203659 | MS.gene06279:intron | 50.0% | |
| AGCACCCTTGAAGCAGAGAT+AGG | + | chr3.1:78204093-78204112 | None:intergenic | 50.0% | |
| AGGTGAGCGGAAGGGTAATT+GGG | + | chr3.1:78204283-78204302 | None:intergenic | 50.0% | |
| ATCACCTCCTGCAACCATTG+TGG | + | chr3.1:78199267-78199286 | None:intergenic | 50.0% | |
| ATGGCAACCAGGGGAAAACA+TGG | + | chr3.1:78204736-78204755 | None:intergenic | 50.0% | |
| CAGCCAATAGCATGTCTTCC+TGG | - | chr3.1:78204553-78204572 | MS.gene06279:intron | 50.0% | |
| CATCACAATCACCCCTCTTC+AGG | + | chr3.1:78204917-78204936 | None:intergenic | 50.0% | |
| CCAATAGCATGTCTTCCTGG+GGG | - | chr3.1:78204556-78204575 | MS.gene06279:intron | 50.0% | |
| CCATGCTTCAAGATGGTGCT+GGG | - | chr3.1:78199677-78199696 | MS.gene06279:intron | 50.0% | |
| CCTATGGTCTGTGTACTACC+AGG | + | chr3.1:78205237-78205256 | None:intergenic | 50.0% | |
| CCTGGTAGTACACAGACCAT+AGG | - | chr3.1:78205234-78205253 | MS.gene06279:CDS | 50.0% | |
| CGAAGTTTCCGGTACTCTTC+AGG | - | chr3.1:78199792-78199811 | MS.gene06279:CDS | 50.0% | |
| CGACTCGTTCCTTACCATGA+AGG | - | chr3.1:78205534-78205553 | MS.gene06279:CDS | 50.0% | |
| CTAACAGAAGGTGAGCGGAA+GGG | + | chr3.1:78204291-78204310 | None:intergenic | 50.0% | |
| GAACACACCTGAATGGCTAC+AGG | + | chr3.1:78204641-78204660 | None:intergenic | 50.0% | |
| GAGACCTAACAGAAGGTGAG+CGG | + | chr3.1:78204296-78204315 | None:intergenic | 50.0% | |
| GCCAATAGCATGTCTTCCTG+GGG | - | chr3.1:78204555-78204574 | MS.gene06279:intron | 50.0% | |
| GGAGACAAGTTACGCTTTCG+GGG | - | chr3.1:78204499-78204518 | MS.gene06279:intron | 50.0% | |
| GGGTTTGAGAATGGCAAGTG+TGG | - | chr3.1:78199440-78199459 | MS.gene06279:CDS | 50.0% | |
| GGTGAAGAGTGAGACCTGAT+AGG | - | chr3.1:78204968-78204987 | MS.gene06279:intron | 50.0% | |
| GTTTCCACAATGGTTGCAGG+AGG | - | chr3.1:78199260-78199279 | MS.gene06279:CDS | 50.0% | |
| TCCATGCTTCAAGATGGTGC+TGG | - | chr3.1:78199676-78199695 | MS.gene06279:intron | 50.0% | |
| TGAGGATGTATACGGTGAGG+AGG | - | chr3.1:78204769-78204788 | MS.gene06279:intron | 50.0% | |
| TGCATAGCCTGTAGCCATTC+AGG | - | chr3.1:78204631-78204650 | MS.gene06279:intron | 50.0% | |
| TGGCAACCAGGGGAAAACAT+GGG | + | chr3.1:78204735-78204754 | None:intergenic | 50.0% | |
| TTCTCCTTCTGCCTCAACTC+AGG | + | chr3.1:78204840-78204859 | None:intergenic | 50.0% | |
| ! | ATGTTTTCCCCTGGTTGCCA+TGG | - | chr3.1:78204735-78204754 | MS.gene06279:intron | 50.0% |
| ! | TGAGTTGAGGCAGAAGGAGA+AGG | - | chr3.1:78204839-78204858 | MS.gene06279:intron | 50.0% |
| AACTGGAATGGCTGGCGTGT+TGG | - | chr3.1:78205155-78205174 | MS.gene06279:CDS | 55.0% | |
| ATACGGTGAGGAGGAGGTTG+AGG | - | chr3.1:78204778-78204797 | MS.gene06279:intron | 55.0% | |
| CACGACGGAGTCGAAGTTTC+CGG | - | chr3.1:78199781-78199800 | MS.gene06279:CDS | 55.0% | |
| CCCAGCACCATCTTGAAGCA+TGG | + | chr3.1:78199680-78199699 | None:intergenic | 55.0% | |
| CCCCCAGGAAGACATGCTAT+TGG | + | chr3.1:78204559-78204578 | None:intergenic | 55.0% | |
| CCTAACAGAAGGTGAGCGGA+AGG | + | chr3.1:78204292-78204311 | None:intergenic | 55.0% | |
| CCTTCCGCTCACCTTCTGTT+AGG | - | chr3.1:78204289-78204308 | MS.gene06279:intron | 55.0% | |
| GCATGTCTTCCTGGGGGTAA+AGG | - | chr3.1:78204562-78204581 | MS.gene06279:intron | 55.0% | |
| GGAGACTGTAGCCTGAGTTG+AGG | - | chr3.1:78204826-78204845 | MS.gene06279:intron | 55.0% | |
| GGATGTATACGGTGAGGAGG+AGG | - | chr3.1:78204772-78204791 | MS.gene06279:intron | 55.0% | |
| GGTCTGTGTACTACCAGGAG+CGG | + | chr3.1:78205232-78205251 | None:intergenic | 55.0% | |
| GGTGGCTCAAGCATGTGCAT+GGG | - | chr3.1:78203232-78203251 | MS.gene06279:intron | 55.0% | |
| GTTCACTTTGATGCCGCTCC+TGG | - | chr3.1:78205216-78205235 | MS.gene06279:CDS | 55.0% | |
| TGGTGGCTCAAGCATGTGCA+TGG | - | chr3.1:78203231-78203250 | MS.gene06279:intron | 55.0% | |
| TGTCGGTGAGCTTGTCCGTA+GGG | + | chr3.1:78203658-78203677 | None:intergenic | 55.0% | |
| TGTGTCACAGGGCATGGCTT+TGG | - | chr3.1:78199569-78199588 | MS.gene06279:intron | 55.0% | |
| TTGTCGGTGAGCTTGTCCGT+AGG | + | chr3.1:78203659-78203678 | None:intergenic | 55.0% | |
| ! | GTAGCCTGAGTTGAGGCAGA+AGG | - | chr3.1:78204833-78204852 | MS.gene06279:intron | 55.0% |
| AGGAGGTTGAGGAGGGACAG+AGG | - | chr3.1:78204789-78204808 | MS.gene06279:intron | 60.0% | |
| GGTGAGGAGGAGGTTGAGGA+GGG | - | chr3.1:78204782-78204801 | MS.gene06279:intron | 60.0% | |
| !! | GTCACAGGGCATGGCTTTGG+TGG | - | chr3.1:78199572-78199591 | MS.gene06279:intron | 60.0% |
| CGGTGAGGAGGAGGTTGAGG+AGG | - | chr3.1:78204781-78204800 | MS.gene06279:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 78199258 | 78205708 | 78199258 | ID=MS.gene06279 |
| chr3.1 | mRNA | 78199258 | 78205708 | 78199258 | ID=MS.gene06279.t1;Parent=MS.gene06279 |
| chr3.1 | exon | 78205503 | 78205708 | 78205503 | ID=MS.gene06279.t1.exon1;Parent=MS.gene06279.t1 |
| chr3.1 | CDS | 78205503 | 78205708 | 78205503 | ID=cds.MS.gene06279.t1;Parent=MS.gene06279.t1 |
| chr3.1 | exon | 78205153 | 78205387 | 78205153 | ID=MS.gene06279.t1.exon2;Parent=MS.gene06279.t1 |
| chr3.1 | CDS | 78205153 | 78205387 | 78205153 | ID=cds.MS.gene06279.t1;Parent=MS.gene06279.t1 |
| chr3.1 | exon | 78201209 | 78201370 | 78201209 | ID=MS.gene06279.t1.exon3;Parent=MS.gene06279.t1 |
| chr3.1 | CDS | 78201209 | 78201370 | 78201209 | ID=cds.MS.gene06279.t1;Parent=MS.gene06279.t1 |
| chr3.1 | exon | 78199709 | 78199819 | 78199709 | ID=MS.gene06279.t1.exon4;Parent=MS.gene06279.t1 |
| chr3.1 | CDS | 78199709 | 78199819 | 78199709 | ID=cds.MS.gene06279.t1;Parent=MS.gene06279.t1 |
| chr3.1 | exon | 78199411 | 78199467 | 78199411 | ID=MS.gene06279.t1.exon5;Parent=MS.gene06279.t1 |
| chr3.1 | CDS | 78199411 | 78199467 | 78199411 | ID=cds.MS.gene06279.t1;Parent=MS.gene06279.t1 |
| chr3.1 | exon | 78199258 | 78199329 | 78199258 | ID=MS.gene06279.t1.exon6;Parent=MS.gene06279.t1 |
| chr3.1 | CDS | 78199258 | 78199329 | 78199258 | ID=cds.MS.gene06279.t1;Parent=MS.gene06279.t1 |
| Gene Sequence |
| Protein sequence |
