Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06296.t1 | XP_003602731.1 | 98.7 | 541 | 7 | 0 | 1 | 541 | 1 | 541 | 6.20E-218 | 766.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06296.t1 | O82709 | 82.9 | 508 | 73 | 4 | 1 | 496 | 1 | 506 | 2.3e-168 | 593.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06296.t1 | G7J2R7 | 98.7 | 541 | 7 | 0 | 1 | 541 | 1 | 541 | 4.4e-218 | 766.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049179 | MS.gene06296 | 0.94366 | 8.05E-103 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene56457 | MS.gene06296 | PPI |
| MS.gene82400 | MS.gene06296 | PPI |
| MS.gene001347 | MS.gene06296 | PPI |
| MS.gene006869 | MS.gene06296 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06296.t1 | MTR_3g098430 | 98.336 | 541 | 9 | 0 | 1 | 541 | 1 | 541 | 0.0 | 1076 |
| MS.gene06296.t1 | MTR_3g098430 | 97.436 | 546 | 9 | 1 | 1 | 541 | 1 | 546 | 0.0 | 1070 |
| MS.gene06296.t1 | MTR_8g095680 | 77.273 | 550 | 106 | 6 | 1 | 541 | 1 | 540 | 0.0 | 794 |
| MS.gene06296.t1 | MTR_4g068080 | 33.995 | 403 | 198 | 13 | 8 | 402 | 8 | 350 | 1.46e-58 | 201 |
| MS.gene06296.t1 | MTR_1g083960 | 38.421 | 380 | 175 | 11 | 33 | 405 | 26 | 353 | 3.88e-58 | 199 |
| MS.gene06296.t1 | MTR_7g080370 | 34.474 | 409 | 195 | 14 | 1 | 398 | 1 | 347 | 2.53e-57 | 197 |
| MS.gene06296.t1 | MTR_7g080370 | 34.474 | 409 | 195 | 14 | 1 | 398 | 1 | 347 | 4.99e-57 | 196 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06296.t1 | AT5G61790 | 75.141 | 531 | 125 | 3 | 11 | 541 | 7 | 530 | 0.0 | 801 |
| MS.gene06296.t1 | AT5G07340 | 75.147 | 511 | 117 | 3 | 31 | 539 | 27 | 529 | 0.0 | 771 |
| MS.gene06296.t1 | AT5G07340 | 75.394 | 508 | 115 | 3 | 34 | 539 | 38 | 537 | 0.0 | 769 |
| MS.gene06296.t1 | AT1G56340 | 38.942 | 416 | 188 | 14 | 5 | 413 | 3 | 359 | 6.06e-62 | 209 |
| MS.gene06296.t1 | AT1G56340 | 38.942 | 416 | 188 | 14 | 5 | 413 | 3 | 359 | 1.20e-61 | 209 |
| MS.gene06296.t1 | AT1G09210 | 38.235 | 408 | 186 | 13 | 5 | 405 | 3 | 351 | 4.12e-59 | 202 |
| MS.gene06296.t1 | AT1G08450 | 33.333 | 429 | 217 | 13 | 11 | 423 | 8 | 383 | 8.42e-57 | 196 |
| MS.gene06296.t1 | AT1G08450 | 30.023 | 433 | 201 | 13 | 11 | 423 | 8 | 358 | 3.85e-43 | 159 |
| MS.gene06296.t1 | AT1G08450 | 34.454 | 238 | 106 | 6 | 194 | 423 | 134 | 329 | 1.67e-25 | 108 |
Find 184 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCTGGCTTTACAGCTTC+TGG | 0.065396 | 3.1:+78030501 | None:intergenic |
| TTACAATAATCTTATCTTTC+TGG | 0.129339 | 3.1:+78029789 | None:intergenic |
| CTGCCATTGGTATTGAAATT+TGG | 0.163969 | 3.1:-78030131 | MS.gene06296:CDS |
| CATTGATAACCCAGCTTATA+AGG | 0.184554 | 3.1:-78030226 | MS.gene06296:CDS |
| AGTGAGGGGCACGATGATTT+TGG | 0.222943 | 3.1:-78031050 | MS.gene06296:CDS |
| GAAAAGGAACCCAGCTTATA+AGG | 0.242385 | 3.1:-78030268 | MS.gene06296:CDS |
| TCAACATACTTTCCAGTCTT+TGG | 0.247163 | 3.1:+78030756 | None:intergenic |
| TGGGTTTCCAACCACTCTCC+TGG | 0.263681 | 3.1:+78030874 | None:intergenic |
| CTCTTTCTCAATGTTAAACT+TGG | 0.276239 | 3.1:+78030020 | None:intergenic |
| GCTCTCTCGTCCCAGTCTTC+TGG | 0.293148 | 3.1:+78030537 | None:intergenic |
| TTCGTCAAGTTCTTTAACTA+TGG | 0.306137 | 3.1:+78030995 | None:intergenic |
| AGAATTCTCACCTCATTATC+AGG | 0.319935 | 3.1:+78030663 | None:intergenic |
| TTTGTTGCCCCGCACCTGTC+TGG | 0.320390 | 3.1:+78030810 | None:intergenic |
| CTCCACTTTCCCTTATAAGC+TGG | 0.323256 | 3.1:+78030258 | None:intergenic |
| ACCCAGCTTATAAGGGTATA+TGG | 0.329615 | 3.1:-78030218 | MS.gene06296:CDS |
| AGCTTCTGGGTCAGGAATCT+TGG | 0.330240 | 3.1:+78030515 | None:intergenic |
| AGAATTCCAATAGTCAGATT+TGG | 0.331821 | 3.1:+78029634 | None:intergenic |
| CAGGGGCTGATTCACACTTT+GGG | 0.332470 | 3.1:+78030316 | None:intergenic |
| GGCTTTACAGCTTCTGGGTC+AGG | 0.336142 | 3.1:+78030507 | None:intergenic |
| TTCATTCTCTCCACCAGCTT+GGG | 0.340196 | 3.1:+78029396 | None:intergenic |
| TCCTTTCAATTGTCTCGCTT+TGG | 0.350249 | 3.1:+78029328 | None:intergenic |
| CCTCTGGCTTTACAGCTTCT+GGG | 0.362016 | 3.1:+78030502 | None:intergenic |
| ACTATGGCGTACTTCCTTGC+TGG | 0.364602 | 3.1:+78031011 | None:intergenic |
| GGTTTGTTATCGTCAGGATC+AGG | 0.364773 | 3.1:+78030558 | None:intergenic |
| AGTTCAAAGTACTCTGGGTT+TGG | 0.371725 | 3.1:+78030180 | None:intergenic |
| GGACCAAACATGACAGAATA+TGG | 0.377257 | 3.1:+78030831 | None:intergenic |
| CTCTTCCACTCACCACAGCC+AGG | 0.377474 | 3.1:+78030297 | None:intergenic |
| CCAGGGGCTGATTCACACTT+TGG | 0.380770 | 3.1:+78030315 | None:intergenic |
| AAGCAACCAAATCTGACTAT+TGG | 0.383408 | 3.1:-78029640 | MS.gene06296:CDS |
| GGGTTTCCAACCACTCTCCT+GGG | 0.383983 | 3.1:+78030875 | None:intergenic |
| CTTCATTCTCTCCACCAGCT+TGG | 0.390458 | 3.1:+78029395 | None:intergenic |
| TCTCCATATTCTGTCATGTT+TGG | 0.391928 | 3.1:-78030834 | MS.gene06296:CDS |
| TGACGAACCTGTCATTCTTA+AGG | 0.393509 | 3.1:-78030979 | MS.gene06296:CDS |
| TCGTCATCCAACCATCCTTC+AGG | 0.394777 | 3.1:+78030429 | None:intergenic |
| GCTGAGTCCGAGGGTATTGC+TGG | 0.398364 | 3.1:-78029970 | MS.gene06296:CDS |
| TTCTCAAGTTCAAAGTACTC+TGG | 0.413427 | 3.1:+78030174 | None:intergenic |
| TTCCATATACCCTTATAAGC+TGG | 0.413553 | 3.1:+78030216 | None:intergenic |
| GGCAACAAAACCTGAGGATT+GGG | 0.417078 | 3.1:-78030382 | MS.gene06296:CDS |
| TCCACTTTCCCTTATAAGCT+GGG | 0.417460 | 3.1:+78030259 | None:intergenic |
| AGCTGTAAAGCCAGAGGACT+GGG | 0.421453 | 3.1:-78030496 | MS.gene06296:CDS |
| CTGGCTGTGGTGAGTGGAAG+AGG | 0.424277 | 3.1:-78030296 | MS.gene06296:CDS |
| TCAATACCAATGGCAGCAAT+AGG | 0.424596 | 3.1:+78030138 | None:intergenic |
| TGACGGCGAGGAGAAGAAAA+AGG | 0.425936 | 3.1:-78030637 | MS.gene06296:CDS |
| TGATGAGGAGGATGGTGAAT+GGG | 0.428154 | 3.1:-78030358 | MS.gene06296:CDS |
| ACAAGGTGCACTTCATCTTC+AGG | 0.433871 | 3.1:-78030788 | MS.gene06296:CDS |
| TCTTCTGGTTTGTTATCGTC+AGG | 0.435076 | 3.1:+78030552 | None:intergenic |
| TGTTTGGTCCAGACAGGTGC+GGG | 0.435806 | 3.1:-78030818 | MS.gene06296:CDS |
| TCTTATCTTTCTGGCCACTT+AGG | 0.437920 | 3.1:+78029798 | None:intergenic |
| CTCATTATCAGGCTTTAGAA+TGG | 0.437946 | 3.1:+78030674 | None:intergenic |
| TACCGCATCGTCAGCTTCAT+CGG | 0.439150 | 3.1:+78032180 | None:intergenic |
| TCTGCAGGAAATCATTGAAA+AGG | 0.446463 | 3.1:-78029668 | MS.gene06296:intron |
| ATGATGAGGAGGATGGTGAA+TGG | 0.451613 | 3.1:-78030359 | MS.gene06296:CDS |
| CTGTCATGTTTGGTCCAGAC+AGG | 0.452777 | 3.1:-78030824 | MS.gene06296:CDS |
| CTGCAGGAAATCATTGAAAA+GGG | 0.453156 | 3.1:-78029667 | MS.gene06296:intron |
| AAGAGGAAGCAAGGAAGAAA+AGG | 0.453312 | 3.1:+78032218 | None:intergenic |
| TTTGAGCCTATTGCTGCCAT+TGG | 0.460151 | 3.1:-78030144 | MS.gene06296:CDS |
| ATCTTTCTGGCCACTTAGGA+AGG | 0.460977 | 3.1:+78029802 | None:intergenic |
| TCCATATACCCTTATAAGCT+GGG | 0.462245 | 3.1:+78030217 | None:intergenic |
| GAATGAAGACAACAAAGAAA+AGG | 0.463345 | 3.1:-78029380 | MS.gene06296:CDS |
| CTGGGATGAGGATGCACCTA+TGG | 0.465153 | 3.1:-78030478 | MS.gene06296:CDS |
| AGTTTCTGTGCGTTCTGTGT+TGG | 0.466104 | 3.1:+78029420 | None:intergenic |
| TCTCAAGTTCAAAGTACTCT+GGG | 0.467035 | 3.1:+78030175 | None:intergenic |
| AAAAGGAACCCAGCTTATAA+GGG | 0.467436 | 3.1:-78030267 | MS.gene06296:CDS |
| ATAAGCTGGGTTATCAATGT+AGG | 0.471071 | 3.1:+78030230 | None:intergenic |
| TCTGGGTCATCTATTTCCTC+TGG | 0.474079 | 3.1:+78030405 | None:intergenic |
| TCTTCCACTCACCACAGCCA+GGG | 0.476497 | 3.1:+78030298 | None:intergenic |
| GCATCCTCATCCCAGTCCTC+TGG | 0.476556 | 3.1:+78030486 | None:intergenic |
| TCCTCATCATCCCAATCCTC+AGG | 0.477110 | 3.1:+78030372 | None:intergenic |
| GATTCGTTGTCAAATCCCTT+GGG | 0.478126 | 3.1:+78030855 | None:intergenic |
| AGATTCGTTGTCAAATCCCT+TGG | 0.479561 | 3.1:+78030854 | None:intergenic |
| AGGCAACAAAACCTGAGGAT+TGG | 0.480179 | 3.1:-78030383 | MS.gene06296:CDS |
| TCTTTCTCAATGTTAAACTT+GGG | 0.480481 | 3.1:+78030021 | None:intergenic |
| TGGCCTCCTACGTGGAGCAT+TGG | 0.487308 | 3.1:+78029348 | None:intergenic |
| TATATGCACCACCACATTCA+AGG | 0.490647 | 3.1:+78030913 | None:intergenic |
| TGATAATATTCTTATAGCTA+AGG | 0.491075 | 3.1:-78030085 | MS.gene06296:CDS |
| AAGCTGTAAAGCCAGAGGAC+TGG | 0.491241 | 3.1:-78030497 | MS.gene06296:CDS |
| ATTGATAACCCAGCTTATAA+GGG | 0.496616 | 3.1:-78030225 | MS.gene06296:CDS |
| ACGATAACAAACCAGAAGAC+TGG | 0.499436 | 3.1:-78030548 | MS.gene06296:CDS |
| CCGTTGGATTGTATCTGAAA+AGG | 0.499726 | 3.1:-78032045 | MS.gene06296:CDS |
| CGAGGGTATTGCTGGCTACC+AGG | 0.502715 | 3.1:-78029962 | MS.gene06296:intron |
| TATTGAAATTTGGACAATGC+AGG | 0.503304 | 3.1:-78030121 | MS.gene06296:CDS |
| TAAGCTGGGTTATCAATGTA+GGG | 0.504397 | 3.1:+78030231 | None:intergenic |
| TCTTCTGCAGGCTAAGGTGG+AGG | 0.505920 | 3.1:-78029461 | MS.gene06296:intron |
| AATCCTATCGTGAAACTACA+TGG | 0.508933 | 3.1:-78030047 | MS.gene06296:CDS |
| GCTCAAAATCCTCCTCGGAC+AGG | 0.517116 | 3.1:+78030607 | None:intergenic |
| ATAAGGGTATATGGAAGCCT+CGG | 0.523060 | 3.1:-78030209 | MS.gene06296:CDS |
| AGGAGCACCGCGATAGCGAT+AGG | 0.523693 | 3.1:+78032238 | None:intergenic |
| CAGCCCCTGGCTGTGGTGAG+TGG | 0.526056 | 3.1:-78030302 | MS.gene06296:CDS |
| TTTCCATGTAGTTTCACGAT+AGG | 0.527990 | 3.1:+78030044 | None:intergenic |
| TTCAACCCCAGGAGAGTGGT+TGG | 0.532251 | 3.1:-78030881 | MS.gene06296:CDS |
| GGAGGCAGCAGCTGAGTCCG+AGG | 0.532327 | 3.1:-78029980 | MS.gene06296:CDS |
| GTTTGTTATCGTCAGGATCA+GGG | 0.533273 | 3.1:+78030559 | None:intergenic |
| AGAGAAACAGAAGGCTGAAG+AGG | 0.535396 | 3.1:-78030001 | MS.gene06296:CDS |
| GATCCATCCTTAAGAATGAC+AGG | 0.536585 | 3.1:+78030972 | None:intergenic |
| TGTCCAAATTTCAATACCAA+TGG | 0.537978 | 3.1:+78030128 | None:intergenic |
| TAAGGGTATATGGAAGCCTC+GGG | 0.538372 | 3.1:-78030208 | MS.gene06296:CDS |
| ACCCAGCTTATAAGGGAAAG+TGG | 0.538755 | 3.1:-78030260 | MS.gene06296:CDS |
| CATTCTAAAGCCTGATAATG+AGG | 0.539931 | 3.1:-78030673 | MS.gene06296:CDS |
| TCTTCATCAATAATTTCCAT+AGG | 0.540356 | 3.1:+78030462 | None:intergenic |
| ACCTGAGGATTGGGATGATG+AGG | 0.540446 | 3.1:-78030373 | MS.gene06296:CDS |
| CTTCCACTCACCACAGCCAG+GGG | 0.542397 | 3.1:+78030299 | None:intergenic |
| TTTGAGACTCGCCTTCAGAA+TGG | 0.542633 | 3.1:-78030936 | MS.gene06296:CDS |
| CGATAACAAACCAGAAGACT+GGG | 0.544702 | 3.1:-78030547 | MS.gene06296:CDS |
| GCAGCAATAGGCTCAAAGTC+AGG | 0.545429 | 3.1:+78030150 | None:intergenic |
| CGCACAGAAACTTCCCAAGC+TGG | 0.545555 | 3.1:-78029409 | MS.gene06296:CDS |
| GAAACAGAAGGCTGAAGAGG+AGG | 0.547348 | 3.1:-78029998 | MS.gene06296:CDS |
| AGTTTGTCAGATGGGACAGA+AGG | 0.547484 | 3.1:+78030714 | None:intergenic |
| CATGAGATAGTTTGTCAGAT+GGG | 0.548220 | 3.1:+78030706 | None:intergenic |
| GTTTGTCAGATGGGACAGAA+GGG | 0.550204 | 3.1:+78030715 | None:intergenic |
| CCAAAGTGTGAATCAGCCCC+TGG | 0.551044 | 3.1:-78030315 | MS.gene06296:CDS |
| TTGTCAGATGGGACAGAAGG+GGG | 0.552914 | 3.1:+78030717 | None:intergenic |
| GTCAGGATCAGGGATTGTCT+TGG | 0.553046 | 3.1:+78030569 | None:intergenic |
| GCAGGCTAAGGTGGAGGCGA+AGG | 0.553851 | 3.1:-78029455 | MS.gene06296:intron |
| AGTGGAAGAGGCCAACGAAA+AGG | 0.554259 | 3.1:-78030284 | MS.gene06296:CDS |
| GGTTTCCAACCACTCTCCTG+GGG | 0.554990 | 3.1:+78030876 | None:intergenic |
| ATTAGCAATGGTGGAACGAA+AGG | 0.558203 | 3.1:-78032266 | None:intergenic |
| GAACGAAGGAAGAGGAAGCA+AGG | 0.558270 | 3.1:+78032209 | None:intergenic |
| CACATTCAAGGCCATTCTGA+AGG | 0.558745 | 3.1:+78030925 | None:intergenic |
| CAGGTGCGGGGCAACAAACA+AGG | 0.564763 | 3.1:-78030805 | MS.gene06296:CDS |
| AAAGCCAGAGGACTGGGATG+AGG | 0.564770 | 3.1:-78030490 | MS.gene06296:CDS |
| GGAGCACCGCGATAGCGATA+GGG | 0.567430 | 3.1:+78032239 | None:intergenic |
| ATGTTTGGTCCAGACAGGTG+CGG | 0.569118 | 3.1:-78030819 | MS.gene06296:CDS |
| GGATCAGGGATTGTCTTGGA+AGG | 0.571851 | 3.1:+78030573 | None:intergenic |
| TCTTTCTGGCCACTTAGGAA+GGG | 0.574034 | 3.1:+78029803 | None:intergenic |
| GATTGGGATGATGAGGAGGA+TGG | 0.574150 | 3.1:-78030366 | MS.gene06296:CDS |
| TGTGAATCAGCCCCTGGCTG+TGG | 0.575974 | 3.1:-78030309 | MS.gene06296:CDS |
| GAGGTGAGAATTCTAGTTGA+CGG | 0.579771 | 3.1:-78030654 | MS.gene06296:CDS |
| CAGCCAATGCTCCACGTAGG+AGG | 0.580449 | 3.1:-78029351 | MS.gene06296:CDS |
| TCTTTAGGCTCATATTCGGC+GGG | 0.582978 | 3.1:-78029579 | MS.gene06296:CDS |
| TTCTTTAGGCTCATATTCGG+CGG | 0.583806 | 3.1:-78029580 | MS.gene06296:CDS |
| TGGAAGCATTCTAAGAGTGA+GGG | 0.585471 | 3.1:-78031065 | MS.gene06296:CDS |
| GGAAGCGTGAACGAAGGAAG+AGG | 0.587228 | 3.1:+78032201 | None:intergenic |
| CTGGAAGCATTCTAAGAGTG+AGG | 0.587589 | 3.1:-78031066 | MS.gene06296:CDS |
| GGAGAGTGGTTGGAAACCCA+AGG | 0.591216 | 3.1:-78030871 | MS.gene06296:CDS |
| GCAGACATTCCCTTCCTAAG+TGG | 0.593740 | 3.1:-78029812 | MS.gene06296:CDS |
| GAACCTGTCATTCTTAAGGA+TGG | 0.594415 | 3.1:-78030975 | MS.gene06296:CDS |
| AGAAGGCTCAAAATCCTCCT+CGG | 0.597536 | 3.1:+78030602 | None:intergenic |
| TATTAAATATCTTCAACCCC+AGG | 0.601083 | 3.1:-78030892 | MS.gene06296:CDS |
| TGAGAAACCTGAAGGATGGT+TGG | 0.601270 | 3.1:-78030436 | MS.gene06296:CDS |
| TCTGGGTTTGGAATCTCCCG+AGG | 0.605370 | 3.1:+78030192 | None:intergenic |
| ACATGAGATAGTTTGTCAGA+TGG | 0.606072 | 3.1:+78030705 | None:intergenic |
| TCTCGCTTTGGCCTCCTACG+TGG | 0.607453 | 3.1:+78029340 | None:intergenic |
| GTCTTGGAAGGGATAAGAGA+AGG | 0.612453 | 3.1:+78030585 | None:intergenic |
| GAGGCAGCAGCTGAGTCCGA+GGG | 0.612757 | 3.1:-78029979 | MS.gene06296:CDS |
| CTTCAGAATGGCCTTGAATG+TGG | 0.614341 | 3.1:-78030924 | MS.gene06296:CDS |
| TATCTTCAACCCCAGGAGAG+TGG | 0.614389 | 3.1:-78030885 | MS.gene06296:CDS |
| TTTGTCAGATGGGACAGAAG+GGG | 0.617670 | 3.1:+78030716 | None:intergenic |
| TGGAATTCTTGCATCCGTTG+TGG | 0.618008 | 3.1:-78029620 | MS.gene06296:CDS |
| TGTCTGCGATCTTGTACAAG+AGG | 0.619339 | 3.1:+78029828 | None:intergenic |
| TTCTTGTTAGTGAACCAGCA+AGG | 0.619414 | 3.1:-78031025 | MS.gene06296:CDS |
| GAGCACCGCGATAGCGATAG+GGG | 0.620301 | 3.1:+78032240 | None:intergenic |
| AAGCTGAGAAACCTGAAGGA+TGG | 0.623492 | 3.1:-78030440 | MS.gene06296:CDS |
| TGCAGGAAATCATTGAAAAG+GGG | 0.624295 | 3.1:-78029666 | MS.gene06296:intron |
| CAGAATGGCCTTGAATGTGG+TGG | 0.626980 | 3.1:-78030921 | MS.gene06296:CDS |
| GCAGGAAATCATTGAAAAGG+GGG | 0.627203 | 3.1:-78029665 | MS.gene06296:intron |
| GAAGGCGAGTCTCAAACTGA+AGG | 0.630110 | 3.1:+78030943 | None:intergenic |
| TGTCAGATGGGACAGAAGGG+GGG | 0.631248 | 3.1:+78030718 | None:intergenic |
| TTCATCGGAAGCGTGAACGA+AGG | 0.632521 | 3.1:+78032195 | None:intergenic |
| GATCAGGGATTGTCTTGGAA+GGG | 0.635602 | 3.1:+78030574 | None:intergenic |
| TTGGATTGTATCTGAAAAGG+AGG | 0.638329 | 3.1:-78032042 | MS.gene06296:CDS |
| CTGGTAGCCAGCAATACCCT+CGG | 0.639757 | 3.1:+78029963 | None:intergenic |
| ATGGTTGGATGACGAGCCAG+AGG | 0.645028 | 3.1:-78030421 | MS.gene06296:CDS |
| GGCTAACTTCCTGTCCGAGG+AGG | 0.645087 | 3.1:-78030616 | MS.gene06296:CDS |
| GAGAATTCTAGTTGACGGCG+AGG | 0.652459 | 3.1:-78030649 | MS.gene06296:CDS |
| CTTCTACGAATCGTTCGATG+AGG | 0.652723 | 3.1:-78032078 | MS.gene06296:CDS |
| AAAGGCTAACTTCCTGTCCG+AGG | 0.652948 | 3.1:-78030619 | MS.gene06296:CDS |
| AGCTGGGTTATCAATGTAGG+GGG | 0.658344 | 3.1:+78030233 | None:intergenic |
| GGAAGCATTCTAAGAGTGAG+GGG | 0.661084 | 3.1:-78031064 | MS.gene06296:CDS |
| AAGCTGGGTTATCAATGTAG+GGG | 0.662575 | 3.1:+78030232 | None:intergenic |
| TGAGGATTGGGATGATGAGG+AGG | 0.663099 | 3.1:-78030370 | MS.gene06296:CDS |
| CATTGAGAAAGAGAAACAGA+AGG | 0.664396 | 3.1:-78030010 | MS.gene06296:CDS |
| GAAATTTGGACAATGCAGGA+CGG | 0.665071 | 3.1:-78030117 | MS.gene06296:CDS |
| ACAGAAACTTCCCAAGCTGG+TGG | 0.666572 | 3.1:-78029406 | MS.gene06296:CDS |
| GAGAGTGGTTGGAAACCCAA+GGG | 0.671705 | 3.1:-78030870 | MS.gene06296:CDS |
| TCTGAAAAGGAGGAATACAA+TGG | 0.671724 | 3.1:-78032032 | MS.gene06296:intron |
| CCCAGAAGCTGTAAAGCCAG+AGG | 0.676697 | 3.1:-78030502 | MS.gene06296:CDS |
| TTCCGATGAAGCTGACGATG+CGG | 0.679909 | 3.1:-78032182 | MS.gene06296:intron |
| CCCAGAGGCAACAAAACCTG+AGG | 0.683397 | 3.1:-78030388 | MS.gene06296:CDS |
| GGTTACCCCTATCGCTATCG+CGG | 0.684117 | 3.1:-78032245 | MS.gene06296:CDS |
| GTTTGGTCCAGACAGGTGCG+GGG | 0.694516 | 3.1:-78030817 | MS.gene06296:CDS |
| GAAGAAGCTGAGAAACCTGA+AGG | 0.695392 | 3.1:-78030444 | MS.gene06296:CDS |
| AGAGGAAATAGATGACCCAG+AGG | 0.718864 | 3.1:-78030403 | MS.gene06296:CDS |
| AAACAGCCAATGCTCCACGT+AGG | 0.734567 | 3.1:-78029354 | MS.gene06296:CDS |
| TGTCACGAAAACAACCACAA+CGG | 0.747223 | 3.1:+78029606 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATAATGAATAATG+AGG | + | chr3.1:78029449-78029468 | None:intergenic | 10.0% |
| !! | ATGAAATTAAATAGAAATTA+AGG | - | chr3.1:78030239-78030258 | MS.gene06296:CDS | 10.0% |
| !! | ATTTCAAAAAATATTCCTAT+TGG | + | chr3.1:78030105-78030124 | None:intergenic | 15.0% |
| !!! | AAATATAAGAATGATTTTTG+TGG | - | chr3.1:78030121-78030140 | MS.gene06296:CDS | 15.0% |
| !!! | CTTATTAATTAATTGTGTTT+TGG | - | chr3.1:78029651-78029670 | MS.gene06296:CDS | 15.0% |
| !!! | TACATTTTGATTTTTGTTTT+GGG | - | chr3.1:78030493-78030512 | MS.gene06296:CDS | 15.0% |
| !!! | TATTTTTTTTTTGTTTGTGA+TGG | - | chr3.1:78029459-78029478 | MS.gene06296:intron | 15.0% |
| !! | AAATGTACATCAAAATTTGT+TGG | + | chr3.1:78030480-78030499 | None:intergenic | 20.0% |
| !! | TAACAGAAATAAAATGAAAG+TGG | + | chr3.1:78030285-78030304 | None:intergenic | 20.0% |
| !! | TGATAATATTCTTATAGCTA+AGG | - | chr3.1:78031507-78031526 | MS.gene06296:intron | 20.0% |
| !! | TTACAATAATCTTATCTTTC+TGG | + | chr3.1:78031806-78031825 | None:intergenic | 20.0% |
| !!! | AATTTTAAAAGGAAATCAAG+TGG | + | chr3.1:78030061-78030080 | None:intergenic | 20.0% |
| !!! | GATAACTTTTTACAAGAAAT+CGG | - | chr3.1:78029697-78029716 | MS.gene06296:intron | 20.0% |
| !!! | GATTTCCTTTTAAAATTACA+GGG | - | chr3.1:78030064-78030083 | MS.gene06296:CDS | 20.0% |
| !!! | GTACATTTTGATTTTTGTTT+TGG | - | chr3.1:78030492-78030511 | MS.gene06296:CDS | 20.0% |
| !!! | TGATTTCCTTTTAAAATTAC+AGG | - | chr3.1:78030063-78030082 | MS.gene06296:CDS | 20.0% |
| !!! | TTATTTCTGTTATTCATTCT+GGG | - | chr3.1:78030293-78030312 | MS.gene06296:CDS | 20.0% |
| !!! | TTTATTTCTGTTATTCATTC+TGG | - | chr3.1:78030292-78030311 | MS.gene06296:CDS | 20.0% |
| ! | AATGGTAAGTAAATTCGAAT+CGG | - | chr3.1:78029578-78029597 | MS.gene06296:CDS | 25.0% |
| ! | ACGGAATAATAATGAAAGTA+AGG | - | chr3.1:78030178-78030197 | MS.gene06296:CDS | 25.0% |
| ! | AGAAATAAAATGAAAGTGGT+TGG | + | chr3.1:78030281-78030300 | None:intergenic | 25.0% |
| ! | ATACATGTGTATAATATTGC+AGG | - | chr3.1:78030022-78030041 | MS.gene06296:CDS | 25.0% |
| ! | CTCGTTCATATTAATTTCAT+GGG | - | chr3.1:78032068-78032087 | MS.gene06296:CDS | 25.0% |
| ! | GATAAAATTTCACAACTTAC+AGG | + | chr3.1:78032045-78032064 | None:intergenic | 25.0% |
| ! | GATTTAAGTAAAACCTAATC+TGG | - | chr3.1:78029792-78029811 | MS.gene06296:intron | 25.0% |
| ! | TCGTTCATATTAATTTCATG+GGG | - | chr3.1:78032069-78032088 | MS.gene06296:CDS | 25.0% |
| ! | TCTTCATCAATAATTTCCAT+AGG | + | chr3.1:78031133-78031152 | None:intergenic | 25.0% |
| ! | TCTTTCTCAATGTTAAACTT+GGG | + | chr3.1:78031574-78031593 | None:intergenic | 25.0% |
| !! | ATTTTCTTTAGGCTCATATT+CGG | - | chr3.1:78032009-78032028 | MS.gene06296:intron | 25.0% |
| !! | GCAAGTTCAATAAATTTTGA+AGG | - | chr3.1:78030378-78030397 | MS.gene06296:CDS | 25.0% |
| !! | GTATTTTTCATTCACATTCA+TGG | - | chr3.1:78032092-78032111 | MS.gene06296:intron | 25.0% |
| !! | TATTTCTGTTATTCATTCTG+GGG | - | chr3.1:78030294-78030313 | MS.gene06296:CDS | 25.0% |
| !! | TTTAAATTTTCCTCCTCTTT+TGG | - | chr3.1:78031849-78031868 | MS.gene06296:intron | 25.0% |
| !! | TTTTCGTGACAATTTTCTTT+AGG | - | chr3.1:78031998-78032017 | MS.gene06296:intron | 25.0% |
| !!! | TCCTATTGGTTTTTATAGTT+GGG | + | chr3.1:78030091-78030110 | None:intergenic | 25.0% |
| !!! | TTCCTATTGGTTTTTATAGT+TGG | + | chr3.1:78030092-78030111 | None:intergenic | 25.0% |
| !!! | TTTTTTTACCTTACAGAAGA+AGG | - | chr3.1:78031734-78031753 | MS.gene06296:intron | 25.0% |
| AAACAAACTAACTGCTATTC+TGG | - | chr3.1:78029890-78029909 | MS.gene06296:intron | 30.0% | |
| AAGAGAGAAGATAGAGTAAA+TGG | + | chr3.1:78031670-78031689 | None:intergenic | 30.0% | |
| AATTAATACGAAACAGATCC+GGG | + | chr3.1:78030435-78030454 | None:intergenic | 30.0% | |
| ACCCAACTATAAAAACCAAT+AGG | - | chr3.1:78030087-78030106 | MS.gene06296:CDS | 30.0% | |
| AGAATTCCAATAGTCAGATT+TGG | + | chr3.1:78031961-78031980 | None:intergenic | 30.0% | |
| ATAATATTGCAGGCTAGATT+TGG | - | chr3.1:78030032-78030051 | MS.gene06296:CDS | 30.0% | |
| ATCCAGTAAGTGAATCATAA+TGG | + | chr3.1:78031878-78031897 | None:intergenic | 30.0% | |
| ATCCATTATGATTCACTTAC+TGG | - | chr3.1:78031873-78031892 | MS.gene06296:intron | 30.0% | |
| ATGCATAAGAAAGAAAAGGA+AGG | + | chr3.1:78031704-78031723 | None:intergenic | 30.0% | |
| ATTATGATTCACTTACTGGA+TGG | - | chr3.1:78031877-78031896 | MS.gene06296:intron | 30.0% | |
| CAATTAATACGAAACAGATC+CGG | + | chr3.1:78030436-78030455 | None:intergenic | 30.0% | |
| CATCATGCATAAGAAAGAAA+AGG | + | chr3.1:78031708-78031727 | None:intergenic | 30.0% | |
| CGTTCATATTAATTTCATGG+GGG | - | chr3.1:78032070-78032089 | MS.gene06296:CDS | 30.0% | |
| CTCTTTCTCAATGTTAAACT+TGG | + | chr3.1:78031575-78031594 | None:intergenic | 30.0% | |
| GAATGAAGACAACAAAGAAA+AGG | - | chr3.1:78032212-78032231 | MS.gene06296:CDS | 30.0% | |
| GCTCGTTCATATTAATTTCA+TGG | - | chr3.1:78032067-78032086 | MS.gene06296:CDS | 30.0% | |
| GTGAATCAATAATCCAGATT+AGG | + | chr3.1:78029808-78029827 | None:intergenic | 30.0% | |
| TATTAAATATCTTCAACCCC+AGG | - | chr3.1:78030700-78030719 | MS.gene06296:CDS | 30.0% | |
| TATTGAAATTTGGACAATGC+AGG | - | chr3.1:78031471-78031490 | MS.gene06296:intron | 30.0% | |
| TGTCCAAATTTCAATACCAA+TGG | + | chr3.1:78031467-78031486 | None:intergenic | 30.0% | |
| TTCGTCAAGTTCTTTAACTA+TGG | + | chr3.1:78030600-78030619 | None:intergenic | 30.0% | |
| ! | AAAGTAAGGATGAAAGCATA+GGG | - | chr3.1:78030192-78030211 | MS.gene06296:CDS | 30.0% |
| ! | ATTGATAACCCAGCTTATAA+GGG | - | chr3.1:78031367-78031386 | MS.gene06296:intron | 30.0% |
| ! | ATTTTTGTGGCAATGTTGAA+GGG | - | chr3.1:78030134-78030153 | MS.gene06296:CDS | 30.0% |
| !! | ACACTTTGGGTTTTCAATTT+TGG | + | chr3.1:78031266-78031285 | None:intergenic | 30.0% |
| !! | ATCATAATGGATACCAAAAG+AGG | + | chr3.1:78031865-78031884 | None:intergenic | 30.0% |
| !! | CACTTTGGGTTTTCAATTTT+GGG | + | chr3.1:78031265-78031284 | None:intergenic | 30.0% |
| !!! | TGATTTTTGTTTTGGGTATC+AGG | - | chr3.1:78030500-78030519 | MS.gene06296:CDS | 30.0% |
| AAAAGGAACCCAGCTTATAA+GGG | - | chr3.1:78031325-78031344 | MS.gene06296:intron | 35.0% | |
| AAGCAACCAAATCTGACTAT+TGG | - | chr3.1:78031952-78031971 | MS.gene06296:intron | 35.0% | |
| AATCCTATCGTGAAACTACA+TGG | - | chr3.1:78031545-78031564 | MS.gene06296:intron | 35.0% | |
| AGAATTCTCACCTCATTATC+AGG | + | chr3.1:78030932-78030951 | None:intergenic | 35.0% | |
| AGGCATAAAAATCCAAAGAC+TGG | - | chr3.1:78030824-78030843 | MS.gene06296:CDS | 35.0% | |
| ATAAGCTGGGTTATCAATGT+AGG | + | chr3.1:78031365-78031384 | None:intergenic | 35.0% | |
| CATTGAGAAAGAGAAACAGA+AGG | - | chr3.1:78031582-78031601 | MS.gene06296:intron | 35.0% | |
| CTGCAGGAAATCATTGAAAA+GGG | - | chr3.1:78031925-78031944 | MS.gene06296:intron | 35.0% | |
| GAGAAGATAGAGTAAATGGA+AGG | + | chr3.1:78031666-78031685 | None:intergenic | 35.0% | |
| TAAGCTGGGTTATCAATGTA+GGG | + | chr3.1:78031364-78031383 | None:intergenic | 35.0% | |
| TATACTTTATGCTTCTCTGC+AGG | - | chr3.1:78031909-78031928 | MS.gene06296:intron | 35.0% | |
| TCAACATACTTTCCAGTCTT+TGG | + | chr3.1:78030839-78030858 | None:intergenic | 35.0% | |
| TCCATATACCCTTATAAGCT+GGG | + | chr3.1:78031378-78031397 | None:intergenic | 35.0% | |
| TCTCCATATTCTGTCATGTT+TGG | - | chr3.1:78030758-78030777 | MS.gene06296:CDS | 35.0% | |
| TCTGAAAAGGAGGAATACAA+TGG | - | chr3.1:78029560-78029579 | MS.gene06296:intron | 35.0% | |
| TCTGCAGGAAATCATTGAAA+AGG | - | chr3.1:78031924-78031943 | MS.gene06296:intron | 35.0% | |
| TGCAGGAAATCATTGAAAAG+GGG | - | chr3.1:78031926-78031945 | MS.gene06296:intron | 35.0% | |
| TTCCATATACCCTTATAAGC+TGG | + | chr3.1:78031379-78031398 | None:intergenic | 35.0% | |
| TTGGATTGTATCTGAAAAGG+AGG | - | chr3.1:78029550-78029569 | MS.gene06296:intron | 35.0% | |
| TTTCCATGTAGTTTCACGAT+AGG | + | chr3.1:78031551-78031570 | None:intergenic | 35.0% | |
| ! | ACATGAGATAGTTTGTCAGA+TGG | + | chr3.1:78030890-78030909 | None:intergenic | 35.0% |
| ! | CATGAGATAGTTTGTCAGAT+GGG | + | chr3.1:78030889-78030908 | None:intergenic | 35.0% |
| ! | CATTGATAACCCAGCTTATA+AGG | - | chr3.1:78031366-78031385 | MS.gene06296:intron | 35.0% |
| ! | CCTTTTCAGATACAATCCAA+CGG | + | chr3.1:78029550-78029569 | None:intergenic | 35.0% |
| ! | CTGCCATTGGTATTGAAATT+TGG | - | chr3.1:78031461-78031480 | MS.gene06296:intron | 35.0% |
| ! | GAAAGTAAGGATGAAAGCAT+AGG | - | chr3.1:78030191-78030210 | MS.gene06296:CDS | 35.0% |
| ! | GATTTTTGTGGCAATGTTGA+AGG | - | chr3.1:78030133-78030152 | MS.gene06296:CDS | 35.0% |
| ! | TCTCAAGTTCAAAGTACTCT+GGG | + | chr3.1:78031420-78031439 | None:intergenic | 35.0% |
| ! | TGGGTCCCTGTAATTTTAAA+AGG | + | chr3.1:78030072-78030091 | None:intergenic | 35.0% |
| ! | TTCTCAAGTTCAAAGTACTC+TGG | + | chr3.1:78031421-78031440 | None:intergenic | 35.0% |
| !! | ATAATGGATACCAAAAGAGG+AGG | + | chr3.1:78031862-78031881 | None:intergenic | 35.0% |
| !! | CATTCTAAAGCCTGATAATG+AGG | - | chr3.1:78030919-78030938 | MS.gene06296:CDS | 35.0% |
| !! | CTCATTATCAGGCTTTAGAA+TGG | + | chr3.1:78030921-78030940 | None:intergenic | 35.0% |
| AAGAGGAAGCAAGGAAGAAA+AGG | + | chr3.1:78029377-78029396 | None:intergenic | 40.0% | |
| AAGCTGGGTTATCAATGTAG+GGG | + | chr3.1:78031363-78031382 | None:intergenic | 40.0% | |
| ACGATAACAAACCAGAAGAC+TGG | - | chr3.1:78031044-78031063 | MS.gene06296:CDS | 40.0% | |
| AGATTCGTTGTCAAATCCCT+TGG | + | chr3.1:78030741-78030760 | None:intergenic | 40.0% | |
| ATGTTGAAGGGTTGTTGTGT+TGG | - | chr3.1:78030146-78030165 | MS.gene06296:CDS | 40.0% | |
| CCGTTGGATTGTATCTGAAA+AGG | - | chr3.1:78029547-78029566 | MS.gene06296:intron | 40.0% | |
| CGATAACAAACCAGAAGACT+GGG | - | chr3.1:78031045-78031064 | MS.gene06296:CDS | 40.0% | |
| GAAAAGGAACCCAGCTTATA+AGG | - | chr3.1:78031324-78031343 | MS.gene06296:intron | 40.0% | |
| GAAATTTGGACAATGCAGGA+CGG | - | chr3.1:78031475-78031494 | MS.gene06296:intron | 40.0% | |
| GAACCTGTCATTCTTAAGGA+TGG | - | chr3.1:78030617-78030636 | MS.gene06296:CDS | 40.0% | |
| GATCCATCCTTAAGAATGAC+AGG | + | chr3.1:78030623-78030642 | None:intergenic | 40.0% | |
| GATTCGTTGTCAAATCCCTT+GGG | + | chr3.1:78030740-78030759 | None:intergenic | 40.0% | |
| GCAGGAAATCATTGAAAAGG+GGG | - | chr3.1:78031927-78031946 | MS.gene06296:intron | 40.0% | |
| GGACCAAACATGACAGAATA+TGG | + | chr3.1:78030764-78030783 | None:intergenic | 40.0% | |
| GTCAAATGCCTTCTTCTGTA+AGG | + | chr3.1:78031745-78031764 | None:intergenic | 40.0% | |
| TATATGCACCACCACATTCA+AGG | + | chr3.1:78030682-78030701 | None:intergenic | 40.0% | |
| TCAATACCAATGGCAGCAAT+AGG | + | chr3.1:78031457-78031476 | None:intergenic | 40.0% | |
| TCCACTTTCCCTTATAAGCT+GGG | + | chr3.1:78031336-78031355 | None:intergenic | 40.0% | |
| TGACGAACCTGTCATTCTTA+AGG | - | chr3.1:78030613-78030632 | MS.gene06296:CDS | 40.0% | |
| TGTCACGAAAACAACCACAA+CGG | + | chr3.1:78031989-78032008 | None:intergenic | 40.0% | |
| TTCTTGTTAGTGAACCAGCA+AGG | - | chr3.1:78030567-78030586 | MS.gene06296:CDS | 40.0% | |
| TTCTTTAGGCTCATATTCGG+CGG | - | chr3.1:78032012-78032031 | MS.gene06296:intron | 40.0% | |
| ! | AACCAAGTCTTTTCTTCTGC+AGG | - | chr3.1:78032119-78032138 | MS.gene06296:intron | 40.0% |
| ! | AATCGGTTTCTGCTACTACA+TGG | - | chr3.1:78029714-78029733 | MS.gene06296:intron | 40.0% |
| ! | ACCCAGCTTATAAGGGTATA+TGG | - | chr3.1:78031374-78031393 | MS.gene06296:intron | 40.0% |
| ! | AGTTCAAAGTACTCTGGGTT+TGG | + | chr3.1:78031415-78031434 | None:intergenic | 40.0% |
| ! | ATAAGGGTATATGGAAGCCT+CGG | - | chr3.1:78031383-78031402 | MS.gene06296:intron | 40.0% |
| ! | ATGGAAGGATTTTCGTTACC+TGG | + | chr3.1:78031651-78031670 | None:intergenic | 40.0% |
| ! | GAGGTGAGAATTCTAGTTGA+CGG | - | chr3.1:78030938-78030957 | MS.gene06296:CDS | 40.0% |
| ! | GTTGTGTTGGCAATATGCTA+CGG | - | chr3.1:78030159-78030178 | MS.gene06296:CDS | 40.0% |
| ! | TCTTATCTTTCTGGCCACTT+AGG | + | chr3.1:78031797-78031816 | None:intergenic | 40.0% |
| !! | ATGAGGATTTTGATAGCCGT+TGG | - | chr3.1:78029531-78029550 | MS.gene06296:intron | 40.0% |
| !! | GTTTGTTATCGTCAGGATCA+GGG | + | chr3.1:78031036-78031055 | None:intergenic | 40.0% |
| !! | TCTTCTGGTTTGTTATCGTC+AGG | + | chr3.1:78031043-78031062 | None:intergenic | 40.0% |
| !! | TGGAAGCATTCTAAGAGTGA+GGG | - | chr3.1:78030527-78030546 | MS.gene06296:CDS | 40.0% |
| AAGCTGAGAAACCTGAAGGA+TGG | - | chr3.1:78031152-78031171 | MS.gene06296:intron | 45.0% | |
| ACAAGGTGCACTTCATCTTC+AGG | - | chr3.1:78030804-78030823 | MS.gene06296:CDS | 45.0% | |
| ACCCAGCTTATAAGGGAAAG+TGG | - | chr3.1:78031332-78031351 | MS.gene06296:intron | 45.0% | |
| AGAAGGCTCAAAATCCTCCT+CGG | + | chr3.1:78030993-78031012 | None:intergenic | 45.0% | |
| AGAGAAACAGAAGGCTGAAG+AGG | - | chr3.1:78031591-78031610 | MS.gene06296:intron | 45.0% | |
| AGAGGAAATAGATGACCCAG+AGG | - | chr3.1:78031189-78031208 | MS.gene06296:intron | 45.0% | |
| AGCCTGCAGAAGAAAAGACT+TGG | + | chr3.1:78032124-78032143 | None:intergenic | 45.0% | |
| AGCTGGGTTATCAATGTAGG+GGG | + | chr3.1:78031362-78031381 | None:intergenic | 45.0% | |
| AGGCAACAAAACCTGAGGAT+TGG | - | chr3.1:78031209-78031228 | MS.gene06296:intron | 45.0% | |
| AGTTTCTGTGCGTTCTGTGT+TGG | + | chr3.1:78032175-78032194 | None:intergenic | 45.0% | |
| AGTTTGTCAGATGGGACAGA+AGG | + | chr3.1:78030881-78030900 | None:intergenic | 45.0% | |
| ATGATGAGGAGGATGGTGAA+TGG | - | chr3.1:78031233-78031252 | MS.gene06296:intron | 45.0% | |
| CACATTCAAGGCCATTCTGA+AGG | + | chr3.1:78030670-78030689 | None:intergenic | 45.0% | |
| CATATCACACCATGCAAACC+CGG | - | chr3.1:78030414-78030433 | MS.gene06296:CDS | 45.0% | |
| CTCCACTTTCCCTTATAAGC+TGG | + | chr3.1:78031337-78031356 | None:intergenic | 45.0% | |
| CTTCTACGAATCGTTCGATG+AGG | - | chr3.1:78029514-78029533 | MS.gene06296:intron | 45.0% | |
| GAAGAAGCTGAGAAACCTGA+AGG | - | chr3.1:78031148-78031167 | MS.gene06296:intron | 45.0% | |
| GATCAGGGATTGTCTTGGAA+GGG | + | chr3.1:78031021-78031040 | None:intergenic | 45.0% | |
| GGCAACAAAACCTGAGGATT+GGG | - | chr3.1:78031210-78031229 | MS.gene06296:intron | 45.0% | |
| GTCTTGGAAGGGATAAGAGA+AGG | + | chr3.1:78031010-78031029 | None:intergenic | 45.0% | |
| GTTTGTCAGATGGGACAGAA+GGG | + | chr3.1:78030880-78030899 | None:intergenic | 45.0% | |
| TCTGGGTCATCTATTTCCTC+TGG | + | chr3.1:78031190-78031209 | None:intergenic | 45.0% | |
| TCTTTAGGCTCATATTCGGC+GGG | - | chr3.1:78032013-78032032 | MS.gene06296:intron | 45.0% | |
| TGAGAAACCTGAAGGATGGT+TGG | - | chr3.1:78031156-78031175 | MS.gene06296:intron | 45.0% | |
| TGATGAGGAGGATGGTGAAT+GGG | - | chr3.1:78031234-78031253 | MS.gene06296:intron | 45.0% | |
| TGGAATTCTTGCATCCGTTG+TGG | - | chr3.1:78031972-78031991 | MS.gene06296:intron | 45.0% | |
| TGTCTGCGATCTTGTACAAG+AGG | + | chr3.1:78031767-78031786 | None:intergenic | 45.0% | |
| TTCATTCTCTCCACCAGCTT+GGG | + | chr3.1:78032199-78032218 | None:intergenic | 45.0% | |
| TTGCATGGTGTGATATGCGT+TGG | + | chr3.1:78030411-78030430 | None:intergenic | 45.0% | |
| TTTGAGCCTATTGCTGCCAT+TGG | - | chr3.1:78031448-78031467 | MS.gene06296:intron | 45.0% | |
| TTTGTCAGATGGGACAGAAG+GGG | + | chr3.1:78030879-78030898 | None:intergenic | 45.0% | |
| ! | ATCTTTCTGGCCACTTAGGA+AGG | + | chr3.1:78031793-78031812 | None:intergenic | 45.0% |
| ! | CTTCAGAATGGCCTTGAATG+TGG | - | chr3.1:78030668-78030687 | MS.gene06296:CDS | 45.0% |
| ! | GTCTTTTCTTCTGCAGGCTA+AGG | - | chr3.1:78032125-78032144 | MS.gene06296:intron | 45.0% |
| ! | TAAGCTGGGTTCCTTTTCGT+TGG | + | chr3.1:78031322-78031341 | None:intergenic | 45.0% |
| ! | TAAGGGTATATGGAAGCCTC+GGG | - | chr3.1:78031384-78031403 | MS.gene06296:intron | 45.0% |
| ! | TCTTTCTGGCCACTTAGGAA+GGG | + | chr3.1:78031792-78031811 | None:intergenic | 45.0% |
| ! | TTTGAGACTCGCCTTCAGAA+TGG | - | chr3.1:78030656-78030675 | MS.gene06296:CDS | 45.0% |
| ! | TTTTCTTCTGCAGGCTAAGG+TGG | - | chr3.1:78032128-78032147 | MS.gene06296:intron | 45.0% |
| !! | CTGGAAGCATTCTAAGAGTG+AGG | - | chr3.1:78030526-78030545 | MS.gene06296:CDS | 45.0% |
| !! | GGAAGCATTCTAAGAGTGAG+GGG | - | chr3.1:78030528-78030547 | MS.gene06296:CDS | 45.0% |
| !! | GGTTTGTTATCGTCAGGATC+AGG | + | chr3.1:78031037-78031056 | None:intergenic | 45.0% |
| !! | TGTTTTGGGTATCAGGTGTC+TGG | - | chr3.1:78030507-78030526 | MS.gene06296:CDS | 45.0% |
| AAACAGCCAATGCTCCACGT+AGG | - | chr3.1:78032238-78032257 | MS.gene06296:CDS | 50.0% | |
| AAAGGCTAACTTCCTGTCCG+AGG | - | chr3.1:78030973-78030992 | MS.gene06296:CDS | 50.0% | |
| AAGCTGTAAAGCCAGAGGAC+TGG | - | chr3.1:78031095-78031114 | MS.gene06296:intron | 50.0% | |
| ACAGAAACTTCCCAAGCTGG+TGG | - | chr3.1:78032186-78032205 | MS.gene06296:CDS | 50.0% | |
| ACCTGAGGATTGGGATGATG+AGG | - | chr3.1:78031219-78031238 | MS.gene06296:intron | 50.0% | |
| ACTATGGCGTACTTCCTTGC+TGG | + | chr3.1:78030584-78030603 | None:intergenic | 50.0% | |
| AGCTGTAAAGCCAGAGGACT+GGG | - | chr3.1:78031096-78031115 | MS.gene06296:intron | 50.0% | |
| AGCTTCTGGGTCAGGAATCT+TGG | + | chr3.1:78031080-78031099 | None:intergenic | 50.0% | |
| AGTGGAAGAGGCCAACGAAA+AGG | - | chr3.1:78031308-78031327 | MS.gene06296:intron | 50.0% | |
| ATGTTTGGTCCAGACAGGTG+CGG | - | chr3.1:78030773-78030792 | MS.gene06296:CDS | 50.0% | |
| CTGTCATGTTTGGTCCAGAC+AGG | - | chr3.1:78030768-78030787 | MS.gene06296:CDS | 50.0% | |
| CTTCATTCTCTCCACCAGCT+TGG | + | chr3.1:78032200-78032219 | None:intergenic | 50.0% | |
| GAAACAGAAGGCTGAAGAGG+AGG | - | chr3.1:78031594-78031613 | MS.gene06296:intron | 50.0% | |
| GAAACAGATCCGGGTTTGCA+TGG | + | chr3.1:78030426-78030445 | None:intergenic | 50.0% | |
| GAACGAAGGAAGAGGAAGCA+AGG | + | chr3.1:78029386-78029405 | None:intergenic | 50.0% | |
| GAAGGCGAGTCTCAAACTGA+AGG | + | chr3.1:78030652-78030671 | None:intergenic | 50.0% | |
| GAGAGTGGTTGGAAACCCAA+GGG | - | chr3.1:78030722-78030741 | MS.gene06296:CDS | 50.0% | |
| GATTGGGATGATGAGGAGGA+TGG | - | chr3.1:78031226-78031245 | MS.gene06296:intron | 50.0% | |
| GCAGACATTCCCTTCCTAAG+TGG | - | chr3.1:78031780-78031799 | MS.gene06296:intron | 50.0% | |
| GCAGCAATAGGCTCAAAGTC+AGG | + | chr3.1:78031445-78031464 | None:intergenic | 50.0% | |
| GGATCAGGGATTGTCTTGGA+AGG | + | chr3.1:78031022-78031041 | None:intergenic | 50.0% | |
| GTCAGGATCAGGGATTGTCT+TGG | + | chr3.1:78031026-78031045 | None:intergenic | 50.0% | |
| TACCGCATCGTCAGCTTCAT+CGG | + | chr3.1:78029415-78029434 | None:intergenic | 50.0% | |
| TATCTTCAACCCCAGGAGAG+TGG | - | chr3.1:78030707-78030726 | MS.gene06296:CDS | 50.0% | |
| TCCTCATCATCCCAATCCTC+AGG | + | chr3.1:78031223-78031242 | None:intergenic | 50.0% | |
| TCGTCATCCAACCATCCTTC+AGG | + | chr3.1:78031166-78031185 | None:intergenic | 50.0% | |
| TGACGGCGAGGAGAAGAAAA+AGG | - | chr3.1:78030955-78030974 | MS.gene06296:CDS | 50.0% | |
| TGAGGATTGGGATGATGAGG+AGG | - | chr3.1:78031222-78031241 | MS.gene06296:intron | 50.0% | |
| TTCCGATGAAGCTGACGATG+CGG | - | chr3.1:78029410-78029429 | MS.gene06296:CDS | 50.0% | |
| TTGTCAGATGGGACAGAAGG+GGG | + | chr3.1:78030878-78030897 | None:intergenic | 50.0% | |
| ! | CAGAATGGCCTTGAATGTGG+TGG | - | chr3.1:78030671-78030690 | MS.gene06296:CDS | 50.0% |
| ! | CAGGGGCTGATTCACACTTT+GGG | + | chr3.1:78031279-78031298 | None:intergenic | 50.0% |
| ! | GAGAATTCTAGTTGACGGCG+AGG | - | chr3.1:78030943-78030962 | MS.gene06296:CDS | 50.0% |
| ! | TTCATCGGAAGCGTGAACGA+AGG | + | chr3.1:78029400-78029419 | None:intergenic | 50.0% |
| !! | AGTGAGGGGCACGATGATTT+TGG | - | chr3.1:78030542-78030561 | MS.gene06296:CDS | 50.0% |
| !! | CCTCTGGCTTTACAGCTTCT+GGG | + | chr3.1:78031093-78031112 | None:intergenic | 50.0% |
| !! | TCCTCTGGCTTTACAGCTTC+TGG | + | chr3.1:78031094-78031113 | None:intergenic | 50.0% |
| !!! | CCTCAGGTTTTGTTGCCTCT+GGG | + | chr3.1:78031207-78031226 | None:intergenic | 50.0% |
| !!! | TCCTCAGGTTTTGTTGCCTC+TGG | + | chr3.1:78031208-78031227 | None:intergenic | 50.0% |
| AAAGCCAGAGGACTGGGATG+AGG | - | chr3.1:78031102-78031121 | MS.gene06296:intron | 55.0% | |
| ATGGTTGGATGACGAGCCAG+AGG | - | chr3.1:78031171-78031190 | MS.gene06296:intron | 55.0% | |
| CAGAAGGGGGGAACTTGAGA+TGG | + | chr3.1:78030865-78030884 | None:intergenic | 55.0% | |
| CCAAAGTGTGAATCAGCCCC+TGG | - | chr3.1:78031277-78031296 | MS.gene06296:intron | 55.0% | |
| CCCAGAAGCTGTAAAGCCAG+AGG | - | chr3.1:78031090-78031109 | MS.gene06296:intron | 55.0% | |
| CCCAGAGGCAACAAAACCTG+AGG | - | chr3.1:78031204-78031223 | MS.gene06296:intron | 55.0% | |
| CGCACAGAAACTTCCCAAGC+TGG | - | chr3.1:78032183-78032202 | MS.gene06296:CDS | 55.0% | |
| CTGGGATGAGGATGCACCTA+TGG | - | chr3.1:78031114-78031133 | MS.gene06296:intron | 55.0% | |
| CTGGTAGCCAGCAATACCCT+CGG | + | chr3.1:78031632-78031651 | None:intergenic | 55.0% | |
| GCTCAAAATCCTCCTCGGAC+AGG | + | chr3.1:78030988-78031007 | None:intergenic | 55.0% | |
| GGAGAGTGGTTGGAAACCCA+AGG | - | chr3.1:78030721-78030740 | MS.gene06296:CDS | 55.0% | |
| GGCTTTACAGCTTCTGGGTC+AGG | + | chr3.1:78031088-78031107 | None:intergenic | 55.0% | |
| GGGTTTCCAACCACTCTCCT+GGG | + | chr3.1:78030720-78030739 | None:intergenic | 55.0% | |
| GGTTACCCCTATCGCTATCG+CGG | - | chr3.1:78029347-78029366 | MS.gene06296:CDS | 55.0% | |
| GGTTTCCAACCACTCTCCTG+GGG | + | chr3.1:78030719-78030738 | None:intergenic | 55.0% | |
| TCTTCCACTCACCACAGCCA+GGG | + | chr3.1:78031297-78031316 | None:intergenic | 55.0% | |
| TCTTCTGCAGGCTAAGGTGG+AGG | - | chr3.1:78032131-78032150 | MS.gene06296:intron | 55.0% | |
| TGGGTTTCCAACCACTCTCC+TGG | + | chr3.1:78030721-78030740 | None:intergenic | 55.0% | |
| TGTCAGATGGGACAGAAGGG+GGG | + | chr3.1:78030877-78030896 | None:intergenic | 55.0% | |
| TGTTTGGTCCAGACAGGTGC+GGG | - | chr3.1:78030774-78030793 | MS.gene06296:CDS | 55.0% | |
| TTCAACCCCAGGAGAGTGGT+TGG | - | chr3.1:78030711-78030730 | MS.gene06296:CDS | 55.0% | |
| ! | CCAGGGGCTGATTCACACTT+TGG | + | chr3.1:78031280-78031299 | None:intergenic | 55.0% |
| ! | GGAAGCGTGAACGAAGGAAG+AGG | + | chr3.1:78029394-78029413 | None:intergenic | 55.0% |
| ! | TCTGGGTTTGGAATCTCCCG+AGG | + | chr3.1:78031403-78031422 | None:intergenic | 55.0% |
| CAGCCAATGCTCCACGTAGG+AGG | - | chr3.1:78032241-78032260 | MS.gene06296:CDS | 60.0% | |
| CAGGTGCGGGGCAACAAACA+AGG | - | chr3.1:78030787-78030806 | MS.gene06296:CDS | 60.0% | |
| CTCTTCCACTCACCACAGCC+AGG | + | chr3.1:78031298-78031317 | None:intergenic | 60.0% | |
| CTGGCTGTGGTGAGTGGAAG+AGG | - | chr3.1:78031296-78031315 | MS.gene06296:intron | 60.0% | |
| CTTCCACTCACCACAGCCAG+GGG | + | chr3.1:78031296-78031315 | None:intergenic | 60.0% | |
| GCATCCTCATCCCAGTCCTC+TGG | + | chr3.1:78031109-78031128 | None:intergenic | 60.0% | |
| GCTCTCTCGTCCCAGTCTTC+TGG | + | chr3.1:78031058-78031077 | None:intergenic | 60.0% | |
| GGCTAACTTCCTGTCCGAGG+AGG | - | chr3.1:78030976-78030995 | MS.gene06296:CDS | 60.0% | |
| GTTTGGTCCAGACAGGTGCG+GGG | - | chr3.1:78030775-78030794 | MS.gene06296:CDS | 60.0% | |
| TCTCGCTTTGGCCTCCTACG+TGG | + | chr3.1:78032255-78032274 | None:intergenic | 60.0% | |
| TGGCCTCCTACGTGGAGCAT+TGG | + | chr3.1:78032247-78032266 | None:intergenic | 60.0% | |
| TGTGAATCAGCCCCTGGCTG+TGG | - | chr3.1:78031283-78031302 | MS.gene06296:intron | 60.0% | |
| TTTGTTGCCCCGCACCTGTC+TGG | + | chr3.1:78030785-78030804 | None:intergenic | 60.0% | |
| ! | GAGCACCGCGATAGCGATAG+GGG | + | chr3.1:78029355-78029374 | None:intergenic | 60.0% |
| !! | AGGAGCACCGCGATAGCGAT+AGG | + | chr3.1:78029357-78029376 | None:intergenic | 60.0% |
| !! | CGAGGGTATTGCTGGCTACC+AGG | - | chr3.1:78031630-78031649 | MS.gene06296:intron | 60.0% |
| !! | GCTGAGTCCGAGGGTATTGC+TGG | - | chr3.1:78031622-78031641 | MS.gene06296:intron | 60.0% |
| !! | GGAGCACCGCGATAGCGATA+GGG | + | chr3.1:78029356-78029375 | None:intergenic | 60.0% |
| GAGGCAGCAGCTGAGTCCGA+GGG | - | chr3.1:78031613-78031632 | MS.gene06296:intron | 65.0% | |
| GCAGGCTAAGGTGGAGGCGA+AGG | - | chr3.1:78032137-78032156 | MS.gene06296:intron | 65.0% | |
| CAGCCCCTGGCTGTGGTGAG+TGG | - | chr3.1:78031290-78031309 | MS.gene06296:intron | 70.0% | |
| GGAGGCAGCAGCTGAGTCCG+AGG | - | chr3.1:78031612-78031631 | MS.gene06296:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 78029333 | 78032281 | 78029333 | ID=MS.gene06296 |
| chr3.1 | mRNA | 78029333 | 78032281 | 78029333 | ID=MS.gene06296.t1;Parent=MS.gene06296 |
| chr3.1 | exon | 78032183 | 78032281 | 78032183 | ID=MS.gene06296.t1.exon1;Parent=MS.gene06296.t1 |
| chr3.1 | CDS | 78032183 | 78032281 | 78032183 | ID=cds.MS.gene06296.t1;Parent=MS.gene06296.t1 |
| chr3.1 | exon | 78032033 | 78032102 | 78032033 | ID=MS.gene06296.t1.exon2;Parent=MS.gene06296.t1 |
| chr3.1 | CDS | 78032033 | 78032102 | 78032033 | ID=cds.MS.gene06296.t1;Parent=MS.gene06296.t1 |
| chr3.1 | exon | 78029963 | 78031092 | 78029963 | ID=MS.gene06296.t1.exon3;Parent=MS.gene06296.t1 |
| chr3.1 | CDS | 78029963 | 78031092 | 78029963 | ID=cds.MS.gene06296.t1;Parent=MS.gene06296.t1 |
| chr3.1 | exon | 78029793 | 78029864 | 78029793 | ID=MS.gene06296.t1.exon4;Parent=MS.gene06296.t1 |
| chr3.1 | CDS | 78029793 | 78029864 | 78029793 | ID=cds.MS.gene06296.t1;Parent=MS.gene06296.t1 |
| chr3.1 | exon | 78029570 | 78029683 | 78029570 | ID=MS.gene06296.t1.exon5;Parent=MS.gene06296.t1 |
| chr3.1 | CDS | 78029570 | 78029683 | 78029570 | ID=cds.MS.gene06296.t1;Parent=MS.gene06296.t1 |
| chr3.1 | exon | 78029333 | 78029473 | 78029333 | ID=MS.gene06296.t1.exon6;Parent=MS.gene06296.t1 |
| chr3.1 | CDS | 78029333 | 78029473 | 78029333 | ID=cds.MS.gene06296.t1;Parent=MS.gene06296.t1 |
| Gene Sequence |
| Protein sequence |
