Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06306.t1 | RHN70044.1 | 95.7 | 583 | 24 | 1 | 1 | 582 | 72 | 654 | 6.30E-301 | 1042.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06306.t1 | A5YVF1 | 50.2 | 576 | 254 | 11 | 9 | 573 | 2 | 555 | 1.6e-148 | 527.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06306.t1 | G7J2Q1 | 95.7 | 583 | 24 | 1 | 1 | 582 | 1 | 583 | 4.5e-301 | 1042.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene06306 | 0.878253 | 3.26E-69 | -1.69E-46 |
| MS.gene053144 | MS.gene06306 | 0.808183 | 3.51E-50 | -1.69E-46 |
| MS.gene054584 | MS.gene06306 | 0.82125 | 4.46E-53 | -1.69E-46 |
| MS.gene056228 | MS.gene06306 | 0.80452 | 2.08E-49 | -1.69E-46 |
| MS.gene056396 | MS.gene06306 | 0.810619 | 1.05E-50 | -1.69E-46 |
| MS.gene059154 | MS.gene06306 | 0.817325 | 3.50E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06306.t1 | MTR_3g098260 | 97.256 | 583 | 15 | 1 | 1 | 582 | 1 | 583 | 0.0 | 1187 |
| MS.gene06306.t1 | MTR_3g098240 | 80.617 | 583 | 109 | 3 | 1 | 582 | 1 | 580 | 0.0 | 895 |
| MS.gene06306.t1 | MTR_2g007690 | 53.281 | 381 | 149 | 3 | 177 | 557 | 189 | 540 | 8.76e-130 | 394 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06306.t1 | AT5G23570 | 54.529 | 563 | 225 | 13 | 28 | 579 | 18 | 560 | 0.0 | 553 |
| MS.gene06306.t1 | AT5G23570 | 54.529 | 563 | 225 | 13 | 28 | 579 | 18 | 560 | 0.0 | 553 |
| MS.gene06306.t1 | AT5G23570 | 56.548 | 504 | 191 | 12 | 28 | 523 | 18 | 501 | 6.02e-177 | 510 |
| MS.gene06306.t1 | AT5G23570 | 56.548 | 504 | 191 | 12 | 28 | 523 | 18 | 501 | 6.02e-177 | 510 |
Find 172 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCACTCATTTGTCGAATT+TGG | 0.126725 | 3.1:+77914706 | None:intergenic |
| TTGAGCCAGCTGCTCAGTTT+TGG | 0.227402 | 3.1:+77916292 | None:intergenic |
| CGTTCCTCCTCTGCATTTGC+AGG | 0.237429 | 3.1:+77913657 | None:intergenic |
| CATTGTCTTTCGCAGCTTCT+CGG | 0.262638 | 3.1:+77914596 | None:intergenic |
| CTGGGGAAGCATTTGGTAAA+TGG | 0.288604 | 3.1:-77915482 | MS.gene06306:CDS |
| AAAGGACCTACCACCTCTTC+TGG | 0.303128 | 3.1:+77916373 | None:intergenic |
| TAGTCAGGTTATCCAAATTC+TGG | 0.305878 | 3.1:+77915706 | None:intergenic |
| CAGCCAGCCACTGGTGGATA+TGG | 0.307074 | 3.1:-77915996 | MS.gene06306:CDS |
| CATATCCACCAGTGGCTGGC+TGG | 0.313166 | 3.1:+77915997 | None:intergenic |
| GGCTGGAGGACCCCGCTGTT+TGG | 0.326991 | 3.1:+77916172 | None:intergenic |
| CTCTACAGGGTGGCTGGAAC+TGG | 0.336380 | 3.1:-77915938 | MS.gene06306:CDS |
| CTAAAACAAAGGGTTCAAAA+AGG | 0.344221 | 3.1:-77915578 | MS.gene06306:CDS |
| CATCATTCCTCCTCCTCTAC+AGG | 0.356057 | 3.1:-77915952 | MS.gene06306:CDS |
| TGTTTGGCCTCCAATGGTTA+TGG | 0.357696 | 3.1:-77915424 | MS.gene06306:CDS |
| AGCCTCAGCTAGTGGTTATC+TGG | 0.359386 | 3.1:-77915091 | MS.gene06306:CDS |
| GGTGGCAATCGACAGCTCTT+TGG | 0.361150 | 3.1:-77914976 | MS.gene06306:CDS |
| AGAAGGATCATGAAATTGTT+TGG | 0.365432 | 3.1:-77915440 | MS.gene06306:CDS |
| TTGATGAGGAATTGCGTAGA+AGG | 0.372096 | 3.1:-77915524 | MS.gene06306:CDS |
| ATATCCACCAGTGGCTGGCT+GGG | 0.390269 | 3.1:+77915998 | None:intergenic |
| CCAGCTTGTCAAGGTGGTCC+TGG | 0.394071 | 3.1:-77915645 | MS.gene06306:CDS |
| AAAGCTCTTGAGGAATCCTT+TGG | 0.402884 | 3.1:-77914627 | MS.gene06306:CDS |
| CTCCTCCTCTACAGGGTGGC+TGG | 0.406525 | 3.1:-77915944 | MS.gene06306:CDS |
| GGACAGTGCCACTGTCTCTC+TGG | 0.414276 | 3.1:+77915666 | None:intergenic |
| TTTGGTGCACTACCATTTCC+TGG | 0.415937 | 3.1:+77914724 | None:intergenic |
| CATTTATCTGATCAATAGTC+AGG | 0.417399 | 3.1:+77915691 | None:intergenic |
| GCTGATGTTAACTTAGGATC+TGG | 0.419420 | 3.1:-77916263 | MS.gene06306:CDS |
| ACCAGCATTTGGTGTCTGCC+AGG | 0.423154 | 3.1:+77916055 | None:intergenic |
| TGCTCTTCTTCCGTGTCTCA+TGG | 0.423168 | 3.1:+77915748 | None:intergenic |
| TCTTCAAATAAAGAAGTTGC+TGG | 0.427490 | 3.1:+77914679 | None:intergenic |
| GGTATTGCTGATGTTAACTT+AGG | 0.436214 | 3.1:-77916269 | MS.gene06306:CDS |
| TTATCTGGAGGCAGAACGTC+TGG | 0.438026 | 3.1:-77915076 | MS.gene06306:CDS |
| GGAGAAACAAATTGTATCTT+CGG | 0.438156 | 3.1:+77915001 | None:intergenic |
| GGAGGACGACTGTGATGATC+TGG | 0.438994 | 3.1:-77915829 | MS.gene06306:CDS |
| TTACCAAATGCTTCCCCAGC+TGG | 0.441325 | 3.1:+77915486 | None:intergenic |
| GTTTATTTAGTGGACAGGTA+TGG | 0.443972 | 3.1:-77915217 | MS.gene06306:intron |
| GTCCCAGCTGGGGAAGCATT+TGG | 0.446522 | 3.1:-77915489 | MS.gene06306:CDS |
| TTCTTCTGTTCAAACTCCTC+TGG | 0.450708 | 3.1:+77915885 | None:intergenic |
| GTAAGAGCACGGCATTCATA+TGG | 0.457091 | 3.1:-77915153 | MS.gene06306:CDS |
| TGCAGATGTGGCTCAAAAGC+AGG | 0.458108 | 3.1:-77916120 | MS.gene06306:CDS |
| GAGTTTGAACAGAAGAATGA+TGG | 0.460624 | 3.1:-77915879 | MS.gene06306:CDS |
| TATCCACCAGTGGCTGGCTG+GGG | 0.464606 | 3.1:+77915999 | None:intergenic |
| AAGCGGTGCTGCCAAACAGC+GGG | 0.465469 | 3.1:-77916183 | MS.gene06306:CDS |
| AGTGGAGCTGGAAGAGCTGC+TGG | 0.466783 | 3.1:-77916083 | MS.gene06306:CDS |
| AGATGATGATGATGAGGAGG+AGG | 0.470515 | 3.1:-77915850 | MS.gene06306:CDS |
| ACGACCTGGAGGCTTTCAAC+AGG | 0.471763 | 3.1:-77914936 | MS.gene06306:CDS |
| CTGTAGAGGAGGAGGAATGA+TGG | 0.473766 | 3.1:+77915953 | None:intergenic |
| TCTGCATTTCCCCATGCTCT+AGG | 0.476420 | 3.1:+77916137 | None:intergenic |
| ATGAATCATGCTAAAACAAA+GGG | 0.476704 | 3.1:-77915588 | MS.gene06306:CDS |
| TTTATTTAGTGGACAGGTAT+GGG | 0.478428 | 3.1:-77915216 | MS.gene06306:intron |
| AATGAGGTCCTACCAGGAAA+TGG | 0.480977 | 3.1:-77914736 | MS.gene06306:CDS |
| CTGGACAGGATGATGGGCCA+TGG | 0.483734 | 3.1:-77916244 | MS.gene06306:CDS |
| GGTAGGTCCTTTACTGCGGC+TGG | 0.484425 | 3.1:-77916362 | MS.gene06306:CDS |
| TGATGATGATGAGGAGGAGG+AGG | 0.491800 | 3.1:-77915847 | MS.gene06306:CDS |
| ATCATTGCCAGCCGCAGTAA+AGG | 0.491954 | 3.1:+77916355 | None:intergenic |
| TAAAATAGTCAAGAAGCTCT+TGG | 0.493762 | 3.1:+77915190 | None:intergenic |
| TGAACAAGAACGATTCTTCA+AGG | 0.493855 | 3.1:-77913781 | MS.gene06306:CDS |
| AGGTTTAAAAGAAGAAGAGA+AGG | 0.494739 | 3.1:-77915457 | MS.gene06306:CDS |
| GGCACTACAGTAGTCCCAGC+TGG | 0.494847 | 3.1:-77915501 | MS.gene06306:CDS |
| TTAGGATCTGGACAGGATGA+TGG | 0.494954 | 3.1:-77916251 | MS.gene06306:CDS |
| GAAGAGCTGCTGGAAACCCC+TGG | 0.495073 | 3.1:-77916073 | MS.gene06306:CDS |
| GGTCTCATATAACCAGCATT+TGG | 0.496607 | 3.1:+77916044 | None:intergenic |
| TGAACAAGATGAAAATGATA+AGG | 0.498263 | 3.1:-77915385 | MS.gene06306:intron |
| GGAAGGCCCCAGCCAGCCAC+TGG | 0.498896 | 3.1:-77916005 | MS.gene06306:CDS |
| TGATCCCAAAACTGAGCAGC+TGG | 0.500326 | 3.1:-77916297 | MS.gene06306:CDS |
| CTTCCATTGCCTCTACCAGC+GGG | 0.500451 | 3.1:+77916023 | None:intergenic |
| CCAGCATTTGGTGTCTGCCA+GGG | 0.501741 | 3.1:+77916056 | None:intergenic |
| GATGAATCATGCTAAAACAA+AGG | 0.503073 | 3.1:-77915589 | MS.gene06306:CDS |
| TATCCATATCCACCAGTGGC+TGG | 0.511523 | 3.1:+77915993 | None:intergenic |
| GTGCACTACCATTTCCTGGT+AGG | 0.512382 | 3.1:+77914728 | None:intergenic |
| TGCTCTAGGATTAGAACCAT+GGG | 0.512421 | 3.1:+77916151 | None:intergenic |
| TGAAATTGTTTGGCCTCCAA+TGG | 0.515700 | 3.1:-77915430 | MS.gene06306:CDS |
| CAGCATTTGGTGTCTGCCAG+GGG | 0.520729 | 3.1:+77916057 | None:intergenic |
| AGAAGATGATGATGATGAGG+AGG | 0.521336 | 3.1:-77915853 | MS.gene06306:CDS |
| ATCATTCCTCCTCCTCTACA+GGG | 0.524207 | 3.1:-77915951 | MS.gene06306:CDS |
| TAAAAGAAATGCAAAGGAAG+AGG | 0.526529 | 3.1:-77913736 | MS.gene06306:CDS |
| CCAGGACCACCTTGACAAGC+TGG | 0.529466 | 3.1:+77915645 | None:intergenic |
| AGATACAATTTGTTTCTCCC+TGG | 0.529912 | 3.1:-77914997 | MS.gene06306:CDS |
| TCGACAGCTCTTTGGATACA+TGG | 0.530084 | 3.1:-77914968 | MS.gene06306:CDS |
| TCATCCCTCGATGACCTTGA+GGG | 0.531293 | 3.1:+77915130 | None:intergenic |
| GAAACATTCAAAAGCTCTTG+AGG | 0.531663 | 3.1:-77914637 | MS.gene06306:CDS |
| TGATGAGGAATTGCGTAGAA+GGG | 0.533128 | 3.1:-77915523 | MS.gene06306:CDS |
| TACAATTTGTTTCTCCCTGG+TGG | 0.533325 | 3.1:-77914994 | MS.gene06306:CDS |
| ATGTGGAATAACAGTGGAGC+TGG | 0.534229 | 3.1:-77916095 | MS.gene06306:CDS |
| TATATGAGACCCGCTGGTAG+AGG | 0.535877 | 3.1:-77916032 | MS.gene06306:CDS |
| TTCTTTGAATAAGTCTCCCA+TGG | 0.536917 | 3.1:+77916227 | None:intergenic |
| TCTTTATTTGAAGAACAAGA+TGG | 0.537740 | 3.1:-77914670 | MS.gene06306:CDS |
| GAAGCATTTGGTAAATGGAA+AGG | 0.538253 | 3.1:-77915477 | MS.gene06306:CDS |
| TACCAAATGCTTCCCCAGCT+GGG | 0.538618 | 3.1:+77915487 | None:intergenic |
| AGACACGGAAGAAGAGCAAA+TGG | 0.539757 | 3.1:-77915743 | MS.gene06306:CDS |
| GTGGTCCTGGTGCTATTGAT+TGG | 0.540649 | 3.1:-77915632 | MS.gene06306:CDS |
| GTATGAAATGAGGTCCTACC+AGG | 0.541290 | 3.1:-77914742 | MS.gene06306:CDS |
| AAGAGCTGTCGATTGCCACC+AGG | 0.541548 | 3.1:+77914979 | None:intergenic |
| AGGCCCCAGCCAGCCACTGG+TGG | 0.541602 | 3.1:-77916002 | MS.gene06306:CDS |
| CGAGAAGCTGCGAAAGACAA+TGG | 0.543259 | 3.1:-77914595 | MS.gene06306:CDS |
| TGGTTCTAATCCTAGAGCAT+GGG | 0.547173 | 3.1:-77916147 | MS.gene06306:CDS |
| AAGGTGAAGAAGACAACTAC+TGG | 0.547743 | 3.1:-77913681 | MS.gene06306:CDS |
| GCACTACAGTAGTCCCAGCT+GGG | 0.548415 | 3.1:-77915500 | MS.gene06306:CDS |
| CCTTCCATTGCCTCTACCAG+CGG | 0.549092 | 3.1:+77916022 | None:intergenic |
| AGACCCGCTGGTAGAGGCAA+TGG | 0.549173 | 3.1:-77916026 | MS.gene06306:CDS |
| CAGCCACCCTGTAGAGGAGG+AGG | 0.549991 | 3.1:+77915945 | None:intergenic |
| CACTGTCCAGCTTGTCAAGG+TGG | 0.550353 | 3.1:-77915651 | MS.gene06306:CDS |
| CGGCATTCATATGGCCCTCA+AGG | 0.550943 | 3.1:-77915144 | MS.gene06306:CDS |
| TTCTGAACCATAACCATTGG+AGG | 0.554853 | 3.1:+77915417 | None:intergenic |
| GGATTTCGAGAGGATGCAGC+AGG | 0.555022 | 3.1:-77913715 | MS.gene06306:CDS |
| TAGGATCTGGACAGGATGAT+GGG | 0.555294 | 3.1:-77916250 | MS.gene06306:CDS |
| CCCTGGCAGACACCAAATGC+TGG | 0.558318 | 3.1:-77916056 | MS.gene06306:CDS |
| CTAGGATTAGAACCATGGGC+TGG | 0.560267 | 3.1:+77916155 | None:intergenic |
| TGTAGAGGAGGAGGAATGAT+GGG | 0.560314 | 3.1:+77915954 | None:intergenic |
| AAGGAACTAATAGAGAAGCT+TGG | 0.563248 | 3.1:-77915035 | MS.gene06306:CDS |
| AATGAGTGATGAATATGATT+CGG | 0.563280 | 3.1:-77915787 | MS.gene06306:CDS |
| ATGGTTCTAATCCTAGAGCA+TGG | 0.563469 | 3.1:-77916148 | MS.gene06306:CDS |
| TTCCAGCCACCCTGTAGAGG+AGG | 0.563976 | 3.1:+77915942 | None:intergenic |
| CTGCAAATGCAGAGGAGGAA+CGG | 0.564181 | 3.1:-77913656 | MS.gene06306:CDS |
| AAAACTGAGCAGCTGGCTCA+AGG | 0.565606 | 3.1:-77916290 | MS.gene06306:CDS |
| GTCAAAAGAGCCATGAGACA+CGG | 0.572339 | 3.1:-77915758 | MS.gene06306:CDS |
| TGGACAGGATGATGGGCCAT+GGG | 0.572470 | 3.1:-77916243 | MS.gene06306:CDS |
| ATGTTTGAAGCCTCAGCTAG+TGG | 0.573694 | 3.1:-77915099 | MS.gene06306:CDS |
| CAGTTCCAGCCACCCTGTAG+AGG | 0.573745 | 3.1:+77915939 | None:intergenic |
| CAGCGGGGTCCTCCAGCCCA+TGG | 0.574927 | 3.1:-77916167 | MS.gene06306:CDS |
| ATGCTCTAGGATTAGAACCA+TGG | 0.578614 | 3.1:+77916150 | None:intergenic |
| GCTGGTTATATGAGACCCGC+TGG | 0.578960 | 3.1:-77916038 | MS.gene06306:CDS |
| GCATGAAGAAATAAAAGAAG+AGG | 0.582341 | 3.1:-77914535 | MS.gene06306:intron |
| AATGCCTGTTGAAAGCCTCC+AGG | 0.589670 | 3.1:+77914932 | None:intergenic |
| CCACGATAAAAGAAATGCAA+AGG | 0.589885 | 3.1:-77913742 | MS.gene06306:CDS |
| GCAGCAGGAAGAGCGTGAGA+AGG | 0.590681 | 3.1:-77913700 | MS.gene06306:CDS |
| AGAAGAAGATGATGATGATG+AGG | 0.592779 | 3.1:-77915856 | MS.gene06306:CDS |
| GGTGCTATTGATTGGTACAG+AGG | 0.593628 | 3.1:-77915624 | MS.gene06306:CDS |
| TGTTAACTTAGGATCTGGAC+AGG | 0.593990 | 3.1:-77916258 | MS.gene06306:CDS |
| GCAGATGTGGCTCAAAAGCA+GGG | 0.600056 | 3.1:-77916119 | MS.gene06306:CDS |
| TGGCTCAAAAGCAGGGCATG+TGG | 0.604785 | 3.1:-77916112 | MS.gene06306:CDS |
| GCTTTCAACAGGCATTGCCA+AGG | 0.605892 | 3.1:-77914925 | MS.gene06306:intron |
| CTGTACCAATCAATAGCACC+AGG | 0.608472 | 3.1:+77915627 | None:intergenic |
| AGAGCTGTCGATTGCCACCA+GGG | 0.611123 | 3.1:+77914980 | None:intergenic |
| TGGCACTGTCCAGCTTGTCA+AGG | 0.612358 | 3.1:-77915654 | MS.gene06306:CDS |
| AGAATGAGTTCCAGAAGAGG+TGG | 0.612845 | 3.1:-77916383 | MS.gene06306:CDS |
| CATGGCAACTAAAGACGACC+TGG | 0.613162 | 3.1:-77914950 | MS.gene06306:CDS |
| TGGTCCTGCAAATGCAGAGG+AGG | 0.614122 | 3.1:-77913661 | MS.gene06306:CDS |
| CCGCTGGTAGAGGCAATGGA+AGG | 0.614168 | 3.1:-77916022 | MS.gene06306:CDS |
| CAAGACTCAAGTATGAAATG+AGG | 0.614242 | 3.1:-77914752 | MS.gene06306:CDS |
| GAAGCGGTGCTGCCAAACAG+CGG | 0.614252 | 3.1:-77916184 | MS.gene06306:CDS |
| GCTTGCTGTACTTCTTGATG+AGG | 0.619881 | 3.1:-77915538 | MS.gene06306:CDS |
| CTCATCCCTCGATGACCTTG+AGG | 0.620639 | 3.1:+77915129 | None:intergenic |
| CTTATGCGGCAGTAAGAGCA+CGG | 0.623295 | 3.1:-77915164 | MS.gene06306:CDS |
| GGATTAGAACCATGGGCTGG+AGG | 0.624835 | 3.1:+77916158 | None:intergenic |
| CTTCTCGGTCACTATACCAA+AGG | 0.627323 | 3.1:+77914611 | None:intergenic |
| GATGAGGAATTGCGTAGAAG+GGG | 0.628195 | 3.1:-77915522 | MS.gene06306:CDS |
| ATGGCCCTCAAGGTCATCGA+GGG | 0.629112 | 3.1:-77915134 | MS.gene06306:CDS |
| GTGTTCTGAACCATAACCAT+TGG | 0.630457 | 3.1:+77915414 | None:intergenic |
| ACTGGAAATCAACTCATGCA+AGG | 0.631690 | 3.1:-77915920 | MS.gene06306:CDS |
| TACTGGTCCTGCAAATGCAG+AGG | 0.631949 | 3.1:-77913664 | MS.gene06306:CDS |
| AAGGAATGAAATTGTACCAG+AGG | 0.635504 | 3.1:-77915901 | MS.gene06306:CDS |
| CTCAGCTAGTGGTTATCTGG+AGG | 0.635751 | 3.1:-77915088 | MS.gene06306:CDS |
| TGAGTTCCAGAAGAGGTGGT+AGG | 0.638395 | 3.1:-77916379 | MS.gene06306:CDS |
| AGCATGGGGAAATGCAGATG+TGG | 0.639900 | 3.1:-77916132 | MS.gene06306:CDS |
| AAGAACGATTCTTCAAGGAA+CGG | 0.640239 | 3.1:-77913776 | MS.gene06306:CDS |
| TGGAGGAGAATCGCATTGTG+AGG | 0.644382 | 3.1:-77914575 | MS.gene06306:CDS |
| CTCCAGATAACCACTAGCTG+AGG | 0.645712 | 3.1:+77915089 | None:intergenic |
| GGTTCTAATCCTAGAGCATG+GGG | 0.649486 | 3.1:-77916146 | MS.gene06306:CDS |
| AGGAGAATCGCATTGTGAGG+CGG | 0.658078 | 3.1:-77914572 | MS.gene06306:CDS |
| TAAATGAACCAGAGAGACAG+TGG | 0.663976 | 3.1:-77915674 | MS.gene06306:CDS |
| CAAAGGAAGAGGATTTCGAG+AGG | 0.667588 | 3.1:-77913725 | MS.gene06306:CDS |
| ACAAGAATGAGTTCCAGAAG+AGG | 0.668165 | 3.1:-77916386 | None:intergenic |
| CAGGGCATGTGGAATAACAG+TGG | 0.668344 | 3.1:-77916101 | MS.gene06306:CDS |
| CACTACAGTAGTCCCAGCTG+GGG | 0.668801 | 3.1:-77915499 | MS.gene06306:CDS |
| ATTCCTCCTCCTCTACAGGG+TGG | 0.683487 | 3.1:-77915948 | MS.gene06306:CDS |
| AGGTGGTAGGTCCTTTACTG+CGG | 0.684790 | 3.1:-77916366 | MS.gene06306:CDS |
| ATTGTATCCATATCCACCAG+TGG | 0.693540 | 3.1:+77915989 | None:intergenic |
| CCAAATTCGACAAATGAGTG+AGG | 0.699862 | 3.1:-77914706 | MS.gene06306:CDS |
| AGCGGTGCTGCCAAACAGCG+GGG | 0.701494 | 3.1:-77916182 | MS.gene06306:CDS |
| GAAGCTGCGAAAGACAATGG+AGG | 0.702107 | 3.1:-77914592 | MS.gene06306:CDS |
| GGCAACTAAAGACGACCTGG+AGG | 0.707545 | 3.1:-77914947 | MS.gene06306:CDS |
| TATGGCCCTCAAGGTCATCG+AGG | 0.715301 | 3.1:-77915135 | MS.gene06306:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTGTTTTGTTTATTTAG+TGG | - | chr3.1:77914779-77914798 | MS.gene06306:intron | 15.0% |
| !! | GATTTATAATAAACACAAAC+TGG | + | chr3.1:77915952-77915971 | None:intergenic | 20.0% |
| !! | TCTTTATACTTTCACTATTT+AGG | - | chr3.1:77915128-77915147 | MS.gene06306:CDS | 20.0% |
| !!! | TGTCCACAAATAATTTTATA+CGG | + | chr3.1:77915563-77915582 | None:intergenic | 20.0% |
| !!! | TTTTGTTAATTTTGCAAAGT+TGG | - | chr3.1:77916082-77916101 | MS.gene06306:CDS | 20.0% |
| ! | AATGAGTGATGAATATGATT+CGG | - | chr3.1:77914219-77914238 | MS.gene06306:intron | 25.0% |
| ! | ATATTTGTGTAGTTCATGAA+TGG | - | chr3.1:77915647-77915666 | MS.gene06306:CDS | 25.0% |
| ! | ATGAATCATGCTAAAACAAA+GGG | - | chr3.1:77914418-77914437 | MS.gene06306:intron | 25.0% |
| ! | CAAGAGAAAAGAGATAAAAT+GGG | + | chr3.1:77916051-77916070 | None:intergenic | 25.0% |
| ! | TAAAACAAAGGGTTCAAAAA+GGG | - | chr3.1:77914429-77914448 | MS.gene06306:intron | 25.0% |
| ! | TCAAGAGAAAAGAGATAAAA+TGG | + | chr3.1:77916052-77916071 | None:intergenic | 25.0% |
| ! | TCTTAGAAAGATTTGGATTT+GGG | - | chr3.1:77915877-77915896 | MS.gene06306:CDS | 25.0% |
| ! | TGAACAAGATGAAAATGATA+AGG | - | chr3.1:77914621-77914640 | MS.gene06306:CDS | 25.0% |
| ! | TGTCCGTATAAAATTATTTG+TGG | - | chr3.1:77915557-77915576 | MS.gene06306:CDS | 25.0% |
| ! | TTAAGACAAGAAACCTATAA+GGG | + | chr3.1:77916125-77916144 | None:intergenic | 25.0% |
| !! | TCTTTATTTGAAGAACAAGA+TGG | - | chr3.1:77915336-77915355 | MS.gene06306:intron | 25.0% |
| !! | TTTAAGACAAGAAACCTATA+AGG | + | chr3.1:77916126-77916145 | None:intergenic | 25.0% |
| AGAAGGATCATGAAATTGTT+TGG | - | chr3.1:77914566-77914585 | MS.gene06306:CDS | 30.0% | |
| AGAATCAGATTAAAAGAGAG+AGG | + | chr3.1:77915224-77915243 | None:intergenic | 30.0% | |
| AGGTTTAAAAGAAGAAGAGA+AGG | - | chr3.1:77914549-77914568 | MS.gene06306:CDS | 30.0% | |
| ATACTTTACTTCCATCATTC+TGG | + | chr3.1:77915188-77915207 | None:intergenic | 30.0% | |
| CAAAAAGTTCTTCCAGAATT+TGG | - | chr3.1:77914288-77914307 | MS.gene06306:intron | 30.0% | |
| CACATTACTTGAAGCATATT+AGG | - | chr3.1:77915510-77915529 | MS.gene06306:CDS | 30.0% | |
| CATTTATCTGATCAATAGTC+AGG | + | chr3.1:77914318-77914337 | None:intergenic | 30.0% | |
| CTAAAACAAAGGGTTCAAAA+AGG | - | chr3.1:77914428-77914447 | MS.gene06306:intron | 30.0% | |
| GATGAATCATGCTAAAACAA+AGG | - | chr3.1:77914417-77914436 | MS.gene06306:intron | 30.0% | |
| GCATGAAGAAATAAAAGAAG+AGG | - | chr3.1:77915471-77915490 | MS.gene06306:CDS | 30.0% | |
| GGAGAAACAAATTGTATCTT+CGG | + | chr3.1:77915008-77915027 | None:intergenic | 30.0% | |
| GTCTTAGAAAGATTTGGATT+TGG | - | chr3.1:77915876-77915895 | MS.gene06306:CDS | 30.0% | |
| TAAAAGAAATGCAAAGGAAG+AGG | - | chr3.1:77916270-77916289 | MS.gene06306:CDS | 30.0% | |
| TAAAATAGTCAAGAAGCTCT+TGG | + | chr3.1:77914819-77914838 | None:intergenic | 30.0% | |
| TCAAAGAAATCGAAAAACAG+AGG | - | chr3.1:77913794-77913813 | MS.gene06306:intron | 30.0% | |
| TCTTCAAATAAAGAAGTTGC+TGG | + | chr3.1:77915330-77915349 | None:intergenic | 30.0% | |
| ! | AAACTGGTTCATCAATAGTA+TGG | + | chr3.1:77915936-77915955 | None:intergenic | 30.0% |
| ! | AATGATGATTTTCAGTCCAA+GGG | - | chr3.1:77913668-77913687 | MS.gene06306:CDS | 30.0% |
| ! | ACAACTTATCTGAAATTACC+AGG | + | chr3.1:77916001-77916020 | None:intergenic | 30.0% |
| ! | ATCAAGTTTGAGTTAGGATA+TGG | - | chr3.1:77915583-77915602 | MS.gene06306:CDS | 30.0% |
| ! | CTCTTTTAATCTGATTCTGT+AGG | - | chr3.1:77915226-77915245 | MS.gene06306:intron | 30.0% |
| ! | TTCTTATTTGCATCAAATGC+TGG | - | chr3.1:77914655-77914674 | MS.gene06306:CDS | 30.0% |
| ! | TTTATTTAGTGGACAGGTAT+GGG | - | chr3.1:77914790-77914809 | MS.gene06306:intron | 30.0% |
| !! | GTACTTATGTTTTGTTGTAG+AGG | - | chr3.1:77915904-77915923 | MS.gene06306:CDS | 30.0% |
| !!! | GTTTTGTTTATTTAGTGGAC+AGG | - | chr3.1:77914784-77914803 | MS.gene06306:intron | 30.0% |
| !!! | TGACTATTTTAGCTCTTATG+CGG | - | chr3.1:77914828-77914847 | MS.gene06306:intron | 30.0% |
| !!! | TGTTTTAGCATGATTCATCA+GGG | + | chr3.1:77914416-77914435 | None:intergenic | 30.0% |
| !!! | TTGTTTTAGCATGATTCATC+AGG | + | chr3.1:77914417-77914436 | None:intergenic | 30.0% |
| AAGAAATCGAAAAACAGAGG+TGG | - | chr3.1:77913797-77913816 | MS.gene06306:intron | 35.0% | |
| AAGAACGATTCTTCAAGGAA+CGG | - | chr3.1:77916230-77916249 | MS.gene06306:CDS | 35.0% | |
| AAGGAACTAATAGAGAAGCT+TGG | - | chr3.1:77914971-77914990 | MS.gene06306:CDS | 35.0% | |
| AAGGAATGAAATTGTACCAG+AGG | - | chr3.1:77914105-77914124 | MS.gene06306:intron | 35.0% | |
| AATTTCTCTATCATGTGTCC+TGG | - | chr3.1:77915980-77915999 | MS.gene06306:CDS | 35.0% | |
| ACATCTTCCATCAAGTAACA+GGG | + | chr3.1:77916204-77916223 | None:intergenic | 35.0% | |
| ACTAAATCCAGCAATGTTCT+AGG | + | chr3.1:77914748-77914767 | None:intergenic | 35.0% | |
| AGCAGAGTCTTAGAAAGATT+TGG | - | chr3.1:77915870-77915889 | MS.gene06306:CDS | 35.0% | |
| CAAGACTCAAGTATGAAATG+AGG | - | chr3.1:77915254-77915273 | MS.gene06306:intron | 35.0% | |
| CCACGATAAAAGAAATGCAA+AGG | - | chr3.1:77916264-77916283 | MS.gene06306:CDS | 35.0% | |
| GAAACATTCAAAAGCTCTTG+AGG | - | chr3.1:77915369-77915388 | MS.gene06306:intron | 35.0% | |
| GAGTTTGAACAGAAGAATGA+TGG | - | chr3.1:77914127-77914146 | MS.gene06306:intron | 35.0% | |
| GGTATTGCTGATGTTAACTT+AGG | - | chr3.1:77913737-77913756 | MS.gene06306:CDS | 35.0% | |
| TAACAATCCTAGAACATTGC+TGG | - | chr3.1:77914738-77914757 | MS.gene06306:CDS | 35.0% | |
| TAACTGAAGAGAATGAACCT+TGG | + | chr3.1:77915101-77915120 | None:intergenic | 35.0% | |
| TACATCTTCCATCAAGTAAC+AGG | + | chr3.1:77916205-77916224 | None:intergenic | 35.0% | |
| TAGTCAGGTTATCCAAATTC+TGG | + | chr3.1:77914303-77914322 | None:intergenic | 35.0% | |
| TGAACAAGAACGATTCTTCA+AGG | - | chr3.1:77916225-77916244 | MS.gene06306:CDS | 35.0% | |
| TGCAGCATCTAAACATTTCA+TGG | + | chr3.1:77915824-77915843 | None:intergenic | 35.0% | |
| TTCTTTGAATAAGTCTCCCA+TGG | + | chr3.1:77913782-77913801 | None:intergenic | 35.0% | |
| ! | AGAAGAAGATGATGATGATG+AGG | - | chr3.1:77914150-77914169 | MS.gene06306:intron | 35.0% |
| ! | AGATACAATTTGTTTCTCCC+TGG | - | chr3.1:77915009-77915028 | MS.gene06306:CDS | 35.0% |
| ! | CAATGATGATTTTCAGTCCA+AGG | - | chr3.1:77913667-77913686 | MS.gene06306:CDS | 35.0% |
| ! | CACACAAATCACATTTTTGC+AGG | + | chr3.1:77915730-77915749 | None:intergenic | 35.0% |
| ! | CCTTTGCATTTCTTTTATCG+TGG | + | chr3.1:77916267-77916286 | None:intergenic | 35.0% |
| ! | GAAGCATTTGGTAAATGGAA+AGG | - | chr3.1:77914529-77914548 | MS.gene06306:intron | 35.0% |
| ! | GTTTATTTAGTGGACAGGTA+TGG | - | chr3.1:77914789-77914808 | MS.gene06306:intron | 35.0% |
| ! | TGGACAATCAAGTTTGAGTT+AGG | - | chr3.1:77915577-77915596 | MS.gene06306:CDS | 35.0% |
| !! | GTTTTAGCATGATTCATCAG+GGG | + | chr3.1:77914415-77914434 | None:intergenic | 35.0% |
| AAAAAGGGTGAAGGTTCACA+GGG | - | chr3.1:77914444-77914463 | MS.gene06306:intron | 40.0% | |
| AAAGCTCTTGAGGAATCCTT+TGG | - | chr3.1:77915379-77915398 | MS.gene06306:intron | 40.0% | |
| AAAGGGTTCAAAAAGGGTGA+AGG | - | chr3.1:77914435-77914454 | MS.gene06306:intron | 40.0% | |
| AAATCGAAAAACAGAGGTGG+TGG | - | chr3.1:77913800-77913819 | MS.gene06306:intron | 40.0% | |
| AAGGTGAAGAAGACAACTAC+TGG | - | chr3.1:77916325-77916344 | MS.gene06306:CDS | 40.0% | |
| ACTGGAAATCAACTCATGCA+AGG | - | chr3.1:77914086-77914105 | MS.gene06306:intron | 40.0% | |
| AGTTAACCAAGCCAGAATGA+TGG | - | chr3.1:77915174-77915193 | MS.gene06306:CDS | 40.0% | |
| ATTGTATCCATATCCACCAG+TGG | + | chr3.1:77914020-77914039 | None:intergenic | 40.0% | |
| CCAAATTCGACAAATGAGTG+AGG | - | chr3.1:77915300-77915319 | MS.gene06306:intron | 40.0% | |
| CCATCAAGTAACAGGGAAAA+TGG | + | chr3.1:77916197-77916216 | None:intergenic | 40.0% | |
| CCTCACTCATTTGTCGAATT+TGG | + | chr3.1:77915303-77915322 | None:intergenic | 40.0% | |
| GAAACCTATAAGGGAGAATG+TGG | + | chr3.1:77916116-77916135 | None:intergenic | 40.0% | |
| GCTGATGTTAACTTAGGATC+TGG | - | chr3.1:77913743-77913762 | MS.gene06306:CDS | 40.0% | |
| GGTCTCATATAACCAGCATT+TGG | + | chr3.1:77913965-77913984 | None:intergenic | 40.0% | |
| TAAATGAACCAGAGAGACAG+TGG | - | chr3.1:77914332-77914351 | MS.gene06306:intron | 40.0% | |
| TCAGAGTGGAGGAGATTAAT+GGG | + | chr3.1:77915753-77915772 | None:intergenic | 40.0% | |
| TGAAATTGTTTGGCCTCCAA+TGG | - | chr3.1:77914576-77914595 | MS.gene06306:CDS | 40.0% | |
| TGATGAGGAATTGCGTAGAA+GGG | - | chr3.1:77914483-77914502 | MS.gene06306:intron | 40.0% | |
| TGTTAACTTAGGATCTGGAC+AGG | - | chr3.1:77913748-77913767 | MS.gene06306:CDS | 40.0% | |
| TTCTGAACCATAACCATTGG+AGG | + | chr3.1:77914592-77914611 | None:intergenic | 40.0% | |
| TTCTTCTGTTCAAACTCCTC+TGG | + | chr3.1:77914124-77914143 | None:intergenic | 40.0% | |
| TTGATGAGGAATTGCGTAGA+AGG | - | chr3.1:77914482-77914501 | MS.gene06306:intron | 40.0% | |
| ! | AGAAGATGATGATGATGAGG+AGG | - | chr3.1:77914153-77914172 | MS.gene06306:intron | 40.0% |
| ! | AGTTAGGATATGGTTCTGCT+TGG | - | chr3.1:77915593-77915612 | MS.gene06306:CDS | 40.0% |
| ! | GATTTTCAGTCCAAGGGAAA+AGG | - | chr3.1:77913674-77913693 | MS.gene06306:CDS | 40.0% |
| ! | GTCTACTTTGAAAGTCAGAG+TGG | + | chr3.1:77915767-77915786 | None:intergenic | 40.0% |
| ! | GTGTTCTGAACCATAACCAT+TGG | + | chr3.1:77914595-77914614 | None:intergenic | 40.0% |
| ! | TACAATTTGTTTCTCCCTGG+TGG | - | chr3.1:77915012-77915031 | MS.gene06306:CDS | 40.0% |
| ! | TACTTTGAAAGTCAGAGTGG+AGG | + | chr3.1:77915764-77915783 | None:intergenic | 40.0% |
| ! | TTACTTCCATCATTCTGGCT+TGG | + | chr3.1:77915183-77915202 | None:intergenic | 40.0% |
| ! | TTGAGATACACCTTTTCCCT+TGG | + | chr3.1:77913687-77913706 | None:intergenic | 40.0% |
| !! | ATGCTCTAGGATTAGAACCA+TGG | + | chr3.1:77913859-77913878 | None:intergenic | 40.0% |
| !! | ATGGTTCTAATCCTAGAGCA+TGG | - | chr3.1:77913858-77913877 | MS.gene06306:intron | 40.0% |
| !! | CCATTTTCCCTGTTACTTGA+TGG | - | chr3.1:77916194-77916213 | MS.gene06306:CDS | 40.0% |
| !! | TGCTCTAGGATTAGAACCAT+GGG | + | chr3.1:77913858-77913877 | None:intergenic | 40.0% |
| !! | TGGTTCTAATCCTAGAGCAT+GGG | - | chr3.1:77913859-77913878 | MS.gene06306:intron | 40.0% |
| AATGAGGTCCTACCAGGAAA+TGG | - | chr3.1:77915270-77915289 | MS.gene06306:intron | 45.0% | |
| AGACACGGAAGAAGAGCAAA+TGG | - | chr3.1:77914263-77914282 | MS.gene06306:intron | 45.0% | |
| ATCATTCCTCCTCCTCTACA+GGG | - | chr3.1:77914055-77914074 | MS.gene06306:intron | 45.0% | |
| ATGTGGAATAACAGTGGAGC+TGG | - | chr3.1:77913911-77913930 | MS.gene06306:intron | 45.0% | |
| CAAAAAGGGTGAAGGTTCAC+AGG | - | chr3.1:77914443-77914462 | MS.gene06306:intron | 45.0% | |
| CAAAGGAAGAGGATTTCGAG+AGG | - | chr3.1:77916281-77916300 | MS.gene06306:CDS | 45.0% | |
| CATTGTCTTTCGCAGCTTCT+CGG | + | chr3.1:77915413-77915432 | None:intergenic | 45.0% | |
| CCATCCACATTCTCCCTTAT+AGG | - | chr3.1:77916109-77916128 | MS.gene06306:CDS | 45.0% | |
| CCTATAAGGGAGAATGTGGA+TGG | + | chr3.1:77916112-77916131 | None:intergenic | 45.0% | |
| CTGTACCAATCAATAGCACC+AGG | + | chr3.1:77914382-77914401 | None:intergenic | 45.0% | |
| CTTCTCGGTCACTATACCAA+AGG | + | chr3.1:77915398-77915417 | None:intergenic | 45.0% | |
| GATGAGGAATTGCGTAGAAG+GGG | - | chr3.1:77914484-77914503 | MS.gene06306:intron | 45.0% | |
| GTATGAAATGAGGTCCTACC+AGG | - | chr3.1:77915264-77915283 | MS.gene06306:intron | 45.0% | |
| GTCAAAAGAGCCATGAGACA+CGG | - | chr3.1:77914248-77914267 | MS.gene06306:intron | 45.0% | |
| GTCAGAGTGGAGGAGATTAA+TGG | + | chr3.1:77915754-77915773 | None:intergenic | 45.0% | |
| TAGGATCTGGACAGGATGAT+GGG | - | chr3.1:77913756-77913775 | MS.gene06306:CDS | 45.0% | |
| TCGACAGCTCTTTGGATACA+TGG | - | chr3.1:77915038-77915057 | MS.gene06306:CDS | 45.0% | |
| TGTAGAGGAGGAGGAATGAT+GGG | + | chr3.1:77914055-77914074 | None:intergenic | 45.0% | |
| TGTTTGGCCTCCAATGGTTA+TGG | - | chr3.1:77914582-77914601 | MS.gene06306:CDS | 45.0% | |
| TTAGGATCTGGACAGGATGA+TGG | - | chr3.1:77913755-77913774 | MS.gene06306:CDS | 45.0% | |
| ! | AGATGATGATGATGAGGAGG+AGG | - | chr3.1:77914156-77914175 | MS.gene06306:intron | 45.0% |
| ! | ATGTTTGAAGCCTCAGCTAG+TGG | - | chr3.1:77914907-77914926 | MS.gene06306:intron | 45.0% |
| ! | GACAAGCATTTTGCTGAGCA+AGG | - | chr3.1:77914952-77914971 | MS.gene06306:CDS | 45.0% |
| ! | GGTTCTAATCCTAGAGCATG+GGG | - | chr3.1:77913860-77913879 | MS.gene06306:intron | 45.0% |
| ! | GTAAGAGCACGGCATTCATA+TGG | - | chr3.1:77914853-77914872 | MS.gene06306:intron | 45.0% |
| ! | TTTGGTGCACTACCATTTCC+TGG | + | chr3.1:77915285-77915304 | None:intergenic | 45.0% |
| !! | AAAAACAGAGGTGGTGGAAG+CGG | - | chr3.1:77913806-77913825 | MS.gene06306:intron | 45.0% |
| !! | CTGGGGAAGCATTTGGTAAA+TGG | - | chr3.1:77914524-77914543 | MS.gene06306:intron | 45.0% |
| !! | GCTTGCTGTACTTCTTGATG+AGG | - | chr3.1:77914468-77914487 | MS.gene06306:intron | 45.0% |
| !! | GGTGCTATTGATTGGTACAG+AGG | - | chr3.1:77914382-77914401 | MS.gene06306:intron | 45.0% |
| !! | TGGCTTGGTTAACTTGCAAC+TGG | + | chr3.1:77915168-77915187 | None:intergenic | 45.0% |
| AAAGGACCTACCACCTCTTC+TGG | + | chr3.1:77913636-77913655 | None:intergenic | 50.0% | |
| AATGCCTGTTGAAAGCCTCC+AGG | + | chr3.1:77915077-77915096 | None:intergenic | 50.0% | |
| AGCATGGGGAAATGCAGATG+TGG | - | chr3.1:77913874-77913893 | MS.gene06306:intron | 50.0% | |
| AGCCTCAGCTAGTGGTTATC+TGG | - | chr3.1:77914915-77914934 | MS.gene06306:intron | 50.0% | |
| AGGAGAATCGCATTGTGAGG+CGG | - | chr3.1:77915434-77915453 | MS.gene06306:CDS | 50.0% | |
| AGGTGGTAGGTCCTTTACTG+CGG | - | chr3.1:77913640-77913659 | MS.gene06306:CDS | 50.0% | |
| ATCATTGCCAGCCGCAGTAA+AGG | + | chr3.1:77913654-77913673 | None:intergenic | 50.0% | |
| CAGGGCATGTGGAATAACAG+TGG | - | chr3.1:77913905-77913924 | MS.gene06306:intron | 50.0% | |
| CATCATTCCTCCTCCTCTAC+AGG | - | chr3.1:77914054-77914073 | MS.gene06306:intron | 50.0% | |
| CATGGCAACTAAAGACGACC+TGG | - | chr3.1:77915056-77915075 | MS.gene06306:CDS | 50.0% | |
| CGAGAAGCTGCGAAAGACAA+TGG | - | chr3.1:77915411-77915430 | MS.gene06306:CDS | 50.0% | |
| CTAGGATTAGAACCATGGGC+TGG | + | chr3.1:77913854-77913873 | None:intergenic | 50.0% | |
| CTCAGCTAGTGGTTATCTGG+AGG | - | chr3.1:77914918-77914937 | MS.gene06306:intron | 50.0% | |
| CTCCAGATAACCACTAGCTG+AGG | + | chr3.1:77914920-77914939 | None:intergenic | 50.0% | |
| CTGCAAATGCAGAGGAGGAA+CGG | - | chr3.1:77916350-77916369 | MS.gene06306:CDS | 50.0% | |
| CTGTAGAGGAGGAGGAATGA+TGG | + | chr3.1:77914056-77914075 | None:intergenic | 50.0% | |
| CTTATGCGGCAGTAAGAGCA+CGG | - | chr3.1:77914842-77914861 | MS.gene06306:intron | 50.0% | |
| GAAGCTGCGAAAGACAATGG+AGG | - | chr3.1:77915414-77915433 | MS.gene06306:CDS | 50.0% | |
| GCAGATGTGGCTCAAAAGCA+GGG | - | chr3.1:77913887-77913906 | MS.gene06306:intron | 50.0% | |
| GTGCACTACCATTTCCTGGT+AGG | + | chr3.1:77915281-77915300 | None:intergenic | 50.0% | |
| TACCAAATGCTTCCCCAGCT+GGG | + | chr3.1:77914522-77914541 | None:intergenic | 50.0% | |
| TACTGGTCCTGCAAATGCAG+AGG | - | chr3.1:77916342-77916361 | MS.gene06306:CDS | 50.0% | |
| TATATGAGACCCGCTGGTAG+AGG | - | chr3.1:77913974-77913993 | MS.gene06306:intron | 50.0% | |
| TATCCATATCCACCAGTGGC+TGG | + | chr3.1:77914016-77914035 | None:intergenic | 50.0% | |
| TCATCCCTCGATGACCTTGA+GGG | + | chr3.1:77914879-77914898 | None:intergenic | 50.0% | |
| TCTGCATTTCCCCATGCTCT+AGG | + | chr3.1:77913872-77913891 | None:intergenic | 50.0% | |
| TGAGTTCCAGAAGAGGTGGT+AGG | - | chr3.1:77913627-77913646 | MS.gene06306:CDS | 50.0% | |
| TGATCCCAAAACTGAGCAGC+TGG | - | chr3.1:77913709-77913728 | MS.gene06306:CDS | 50.0% | |
| TGCAGATGTGGCTCAAAAGC+AGG | - | chr3.1:77913886-77913905 | MS.gene06306:intron | 50.0% | |
| TGCTCTTCTTCCGTGTCTCA+TGG | + | chr3.1:77914261-77914280 | None:intergenic | 50.0% | |
| TGGAGGAGAATCGCATTGTG+AGG | - | chr3.1:77915431-77915450 | MS.gene06306:CDS | 50.0% | |
| TTACCAAATGCTTCCCCAGC+TGG | + | chr3.1:77914523-77914542 | None:intergenic | 50.0% | |
| TTATCTGGAGGCAGAACGTC+TGG | - | chr3.1:77914930-77914949 | MS.gene06306:CDS | 50.0% | |
| ! | AAAACTGAGCAGCTGGCTCA+AGG | - | chr3.1:77913716-77913735 | MS.gene06306:CDS | 50.0% |
| ! | GCTTTCAACAGGCATTGCCA+AGG | - | chr3.1:77915081-77915100 | MS.gene06306:CDS | 50.0% |
| ! | TGAGCCAGCTGCTCAGTTTT+GGG | + | chr3.1:77913716-77913735 | None:intergenic | 50.0% |
| ! | TGATGATGATGAGGAGGAGG+AGG | - | chr3.1:77914159-77914178 | MS.gene06306:intron | 50.0% |
| ! | TTGAGCCAGCTGCTCAGTTT+TGG | + | chr3.1:77913717-77913736 | None:intergenic | 50.0% |
| !! | GTGGTCCTGGTGCTATTGAT+TGG | - | chr3.1:77914374-77914393 | MS.gene06306:intron | 50.0% |
| ACGACCTGGAGGCTTTCAAC+AGG | - | chr3.1:77915070-77915089 | MS.gene06306:CDS | 55.0% | |
| ATGGCCCTCAAGGTCATCGA+GGG | - | chr3.1:77914872-77914891 | MS.gene06306:intron | 55.0% | |
| ATTCCTCCTCCTCTACAGGG+TGG | - | chr3.1:77914058-77914077 | MS.gene06306:intron | 55.0% | |
| CACTACAGTAGTCCCAGCTG+GGG | - | chr3.1:77914507-77914526 | MS.gene06306:intron | 55.0% | |
| CACTGTCCAGCTTGTCAAGG+TGG | - | chr3.1:77914355-77914374 | MS.gene06306:intron | 55.0% | |
| CCTTCCATTGCCTCTACCAG+CGG | + | chr3.1:77913987-77914006 | None:intergenic | 55.0% | |
| CGGCATTCATATGGCCCTCA+AGG | - | chr3.1:77914862-77914881 | MS.gene06306:intron | 55.0% | |
| CGTTCCTCCTCTGCATTTGC+AGG | + | chr3.1:77916352-77916371 | None:intergenic | 55.0% | |
| CTCATCCCTCGATGACCTTG+AGG | + | chr3.1:77914880-77914899 | None:intergenic | 55.0% | |
| CTTCCATTGCCTCTACCAGC+GGG | + | chr3.1:77913986-77914005 | None:intergenic | 55.0% | |
| GCACTACAGTAGTCCCAGCT+GGG | - | chr3.1:77914506-77914525 | MS.gene06306:intron | 55.0% | |
| GCTGGTTATATGAGACCCGC+TGG | - | chr3.1:77913968-77913987 | MS.gene06306:intron | 55.0% | |
| GGAGGACGACTGTGATGATC+TGG | - | chr3.1:77914177-77914196 | MS.gene06306:intron | 55.0% | |
| GGATTTCGAGAGGATGCAGC+AGG | - | chr3.1:77916291-77916310 | MS.gene06306:CDS | 55.0% | |
| GGCAACTAAAGACGACCTGG+AGG | - | chr3.1:77915059-77915078 | MS.gene06306:CDS | 55.0% | |
| GGTGGCAATCGACAGCTCTT+TGG | - | chr3.1:77915030-77915049 | MS.gene06306:CDS | 55.0% | |
| TATGGCCCTCAAGGTCATCG+AGG | - | chr3.1:77914871-77914890 | MS.gene06306:intron | 55.0% | |
| TGGCACTGTCCAGCTTGTCA+AGG | - | chr3.1:77914352-77914371 | MS.gene06306:intron | 55.0% | |
| TGGCTCAAAAGCAGGGCATG+TGG | - | chr3.1:77913894-77913913 | MS.gene06306:intron | 55.0% | |
| TGGTCCTGCAAATGCAGAGG+AGG | - | chr3.1:77916345-77916364 | MS.gene06306:CDS | 55.0% | |
| ! | AAGAGCTGTCGATTGCCACC+AGG | + | chr3.1:77915030-77915049 | None:intergenic | 55.0% |
| ! | AGAGCTGTCGATTGCCACCA+GGG | + | chr3.1:77915029-77915048 | None:intergenic | 55.0% |
| ! | ATATCCACCAGTGGCTGGCT+GGG | + | chr3.1:77914011-77914030 | None:intergenic | 55.0% |
| !! | ACCAGCATTTGGTGTCTGCC+AGG | + | chr3.1:77913954-77913973 | None:intergenic | 55.0% |
| !! | CAGCATTTGGTGTCTGCCAG+GGG | + | chr3.1:77913952-77913971 | None:intergenic | 55.0% |
| !! | CCAGCATTTGGTGTCTGCCA+GGG | + | chr3.1:77913953-77913972 | None:intergenic | 55.0% |
| !! | GGATTAGAACCATGGGCTGG+AGG | + | chr3.1:77913851-77913870 | None:intergenic | 55.0% |
| !! | TGGACAGGATGATGGGCCAT+GGG | - | chr3.1:77913763-77913782 | MS.gene06306:CDS | 55.0% |
| AGACCCGCTGGTAGAGGCAA+TGG | - | chr3.1:77913980-77913999 | MS.gene06306:intron | 60.0% | |
| AGTGGAGCTGGAAGAGCTGC+TGG | - | chr3.1:77913923-77913942 | MS.gene06306:intron | 60.0% | |
| CAGTTCCAGCCACCCTGTAG+AGG | + | chr3.1:77914070-77914089 | None:intergenic | 60.0% | |
| CATATCCACCAGTGGCTGGC+TGG | + | chr3.1:77914012-77914031 | None:intergenic | 60.0% | |
| CCAGCTTGTCAAGGTGGTCC+TGG | - | chr3.1:77914361-77914380 | MS.gene06306:intron | 60.0% | |
| CCAGGACCACCTTGACAAGC+TGG | + | chr3.1:77914364-77914383 | None:intergenic | 60.0% | |
| CCCTGGCAGACACCAAATGC+TGG | - | chr3.1:77913950-77913969 | MS.gene06306:intron | 60.0% | |
| CCGCTGGTAGAGGCAATGGA+AGG | - | chr3.1:77913984-77914003 | MS.gene06306:intron | 60.0% | |
| CTCTACAGGGTGGCTGGAAC+TGG | - | chr3.1:77914068-77914087 | MS.gene06306:intron | 60.0% | |
| GAAGAGCTGCTGGAAACCCC+TGG | - | chr3.1:77913933-77913952 | MS.gene06306:intron | 60.0% | |
| GGCACTACAGTAGTCCCAGC+TGG | - | chr3.1:77914505-77914524 | MS.gene06306:intron | 60.0% | |
| GGTAGGTCCTTTACTGCGGC+TGG | - | chr3.1:77913644-77913663 | MS.gene06306:CDS | 60.0% | |
| TTCCAGCCACCCTGTAGAGG+AGG | + | chr3.1:77914067-77914086 | None:intergenic | 60.0% | |
| ! | CAGCCAGCCACTGGTGGATA+TGG | - | chr3.1:77914010-77914029 | MS.gene06306:intron | 60.0% |
| ! | GCAGCAGGAAGAGCGTGAGA+AGG | - | chr3.1:77916306-77916325 | MS.gene06306:CDS | 60.0% |
| ! | GGACAGTGCCACTGTCTCTC+TGG | + | chr3.1:77914343-77914362 | None:intergenic | 60.0% |
| ! | TATCCACCAGTGGCTGGCTG+GGG | + | chr3.1:77914010-77914029 | None:intergenic | 60.0% |
| !! | AAGCGGTGCTGCCAAACAGC+GGG | - | chr3.1:77913823-77913842 | MS.gene06306:intron | 60.0% |
| !! | CTGGACAGGATGATGGGCCA+TGG | - | chr3.1:77913762-77913781 | MS.gene06306:CDS | 60.0% |
| !! | GAAGCGGTGCTGCCAAACAG+CGG | - | chr3.1:77913822-77913841 | MS.gene06306:intron | 60.0% |
| !! | GTCCCAGCTGGGGAAGCATT+TGG | - | chr3.1:77914517-77914536 | MS.gene06306:intron | 60.0% |
| CAGCCACCCTGTAGAGGAGG+AGG | + | chr3.1:77914064-77914083 | None:intergenic | 65.0% | |
| CTCCTCCTCTACAGGGTGGC+TGG | - | chr3.1:77914062-77914081 | MS.gene06306:intron | 65.0% | |
| !! | AGCGGTGCTGCCAAACAGCG+GGG | - | chr3.1:77913824-77913843 | MS.gene06306:intron | 65.0% |
| GGCTGGAGGACCCCGCTGTT+TGG | + | chr3.1:77913837-77913856 | None:intergenic | 70.0% | |
| AGGCCCCAGCCAGCCACTGG+TGG | - | chr3.1:77914004-77914023 | MS.gene06306:intron | 75.0% | |
| CAGCGGGGTCCTCCAGCCCA+TGG | - | chr3.1:77913839-77913858 | MS.gene06306:intron | 75.0% | |
| GGAAGGCCCCAGCCAGCCAC+TGG | - | chr3.1:77914001-77914020 | MS.gene06306:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 77913626 | 77916402 | 77913626 | ID=MS.gene06306 |
| chr3.1 | mRNA | 77913626 | 77916402 | 77913626 | ID=MS.gene06306.t1;Parent=MS.gene06306 |
| chr3.1 | exon | 77915386 | 77916402 | 77915386 | ID=MS.gene06306.t1.exon1;Parent=MS.gene06306.t1 |
| chr3.1 | CDS | 77915386 | 77916402 | 77915386 | ID=cds.MS.gene06306.t1;Parent=MS.gene06306.t1 |
| chr3.1 | exon | 77914926 | 77915229 | 77914926 | ID=MS.gene06306.t1.exon2;Parent=MS.gene06306.t1 |
| chr3.1 | CDS | 77914926 | 77915229 | 77914926 | ID=cds.MS.gene06306.t1;Parent=MS.gene06306.t1 |
| chr3.1 | exon | 77914536 | 77914780 | 77914536 | ID=MS.gene06306.t1.exon3;Parent=MS.gene06306.t1 |
| chr3.1 | CDS | 77914536 | 77914780 | 77914536 | ID=cds.MS.gene06306.t1;Parent=MS.gene06306.t1 |
| chr3.1 | exon | 77913626 | 77913808 | 77913626 | ID=MS.gene06306.t1.exon4;Parent=MS.gene06306.t1 |
| chr3.1 | CDS | 77913626 | 77913808 | 77913626 | ID=cds.MS.gene06306.t1;Parent=MS.gene06306.t1 |
| Gene Sequence |
| Protein sequence |
