Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063139.t1 | XP_003603980.2 | 97.8 | 273 | 6 | 0 | 3 | 275 | 54 | 326 | 8.40E-155 | 556.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063139.t1 | Q6NPM8 | 74.0 | 273 | 70 | 1 | 3 | 275 | 74 | 345 | 4.0e-121 | 435.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063139.t1 | G7J7Q5 | 97.8 | 273 | 6 | 0 | 3 | 275 | 54 | 326 | 6.1e-155 | 556.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057148 | MS.gene063139 | 0.804823 | 1.80E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063139.t1 | MTR_3g117220 | 97.802 | 273 | 6 | 0 | 3 | 275 | 54 | 326 | 0.0 | 559 |
| MS.gene063139.t1 | MTR_3g117220 | 96.124 | 258 | 7 | 1 | 3 | 257 | 54 | 311 | 0.0 | 518 |
| MS.gene063139.t1 | MTR_3g117220 | 96.319 | 163 | 6 | 0 | 3 | 165 | 54 | 216 | 7.35e-117 | 335 |
| MS.gene063139.t1 | MTR_2g026060 | 28.511 | 235 | 159 | 6 | 13 | 239 | 9 | 242 | 2.48e-20 | 88.2 |
| MS.gene063139.t1 | MTR_0151s0030 | 25.984 | 254 | 162 | 7 | 6 | 242 | 57 | 301 | 9.33e-15 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063139.t1 | AT4G39120 | 75.472 | 265 | 64 | 1 | 11 | 275 | 82 | 345 | 1.07e-155 | 437 |
| MS.gene063139.t1 | AT4G39120 | 75.472 | 265 | 64 | 1 | 11 | 275 | 111 | 374 | 5.26e-155 | 437 |
| MS.gene063139.t1 | AT3G02870 | 28.302 | 265 | 160 | 6 | 12 | 255 | 7 | 262 | 1.66e-21 | 91.7 |
| MS.gene063139.t1 | AT3G02870 | 27.600 | 250 | 151 | 6 | 27 | 255 | 19 | 259 | 4.04e-21 | 90.5 |
| MS.gene063139.t1 | AT3G02870 | 28.137 | 263 | 161 | 6 | 12 | 255 | 7 | 260 | 1.53e-20 | 89.0 |
| MS.gene063139.t1 | AT1G31190 | 26.482 | 253 | 156 | 8 | 7 | 242 | 83 | 322 | 3.82e-16 | 77.8 |
Find 59 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATATGCTCTCTTGTCTTC+TGG | 0.208968 | 3.4:+99643910 | MS.gene063139:CDS |
| ATTTCAGGGAAACCCTTATT+TGG | 0.225874 | 3.4:+99642108 | MS.gene063139:intron |
| GGAAAGAGAACTACACTAAA+TGG | 0.260270 | 3.4:+99642705 | MS.gene063139:CDS |
| AGCAATGAGAGTACCAAATA+AGG | 0.271556 | 3.4:-99642121 | None:intergenic |
| GAAAGATGGATTGGAATAAC+TGG | 0.286544 | 3.4:+99642684 | MS.gene063139:CDS |
| TATTTCTTCTGAAATATTTA+CGG | 0.288559 | 3.4:-99640949 | None:intergenic |
| CAGGTTAAAATTCCATTATA+TGG | 0.304659 | 3.4:+99643874 | MS.gene063139:intron |
| AAGACAGTGCTGATTATGTT+TGG | 0.340004 | 3.4:+99641952 | MS.gene063139:CDS |
| TGCAGTTACGGAGAAGAAAA+AGG | 0.363328 | 3.4:+99641915 | MS.gene063139:intron |
| TAGCAATCACAACCATATAA+TGG | 0.365852 | 3.4:-99643886 | None:intergenic |
| CCTCCAGAGCCTTCAATAAC+AGG | 0.372058 | 3.4:-99644147 | None:intergenic |
| GCATTGATACCTGTTATTGA+AGG | 0.408969 | 3.4:+99644138 | MS.gene063139:CDS |
| TGGGTATTAGATCCTATTGA+TGG | 0.425370 | 3.4:+99641972 | MS.gene063139:CDS |
| GTGGATCTTGTCGTTGAGTC+CGG | 0.426317 | 3.4:+99643937 | MS.gene063139:CDS |
| AGACAGTGCTGATTATGTTT+GGG | 0.427573 | 3.4:+99641953 | MS.gene063139:CDS |
| AAGCTCTTAGTTCCATCAAT+AGG | 0.428762 | 3.4:-99641984 | None:intergenic |
| ATACCTGTTATTGAAGGCTC+TGG | 0.458695 | 3.4:+99644144 | MS.gene063139:CDS |
| CTGGAGGTGTCATAACTGAT+TGG | 0.474782 | 3.4:+99644163 | MS.gene063139:CDS |
| TGACAAACAGATTCATCAAC+AGG | 0.476165 | 3.4:+99644627 | MS.gene063139:CDS |
| GATTGATCAGCAATGGTGAC+AGG | 0.483827 | 3.4:-99641100 | None:intergenic |
| AACCTGTGTTAAAAGAAAGA+TGG | 0.484728 | 3.4:+99642670 | MS.gene063139:CDS |
| GACATCTCCGGCGGCGTCGG+CGG | 0.484833 | 3.4:-99640924 | None:intergenic |
| GCAATGAGAGTACCAAATAA+GGG | 0.487130 | 3.4:-99642120 | None:intergenic |
| AATAAAGCCGCCGACGCCGC+CGG | 0.502814 | 3.4:+99640917 | MS.gene063139:CDS |
| GATGACATCTCCGGCGGCGT+CGG | 0.513194 | 3.4:-99640927 | None:intergenic |
| CATACAAATATGCTTGAGAA+AGG | 0.516891 | 3.4:-99642758 | None:intergenic |
| AAGTGATTGAGTTGGTGAGG+AGG | 0.518635 | 3.4:-99640881 | None:intergenic |
| GTGAGGAGGCGAAGATGAGG+TGG | 0.520064 | 3.4:-99640867 | None:intergenic |
| GTGTTAAAAGAAAGATGGAT+TGG | 0.539044 | 3.4:+99642675 | MS.gene063139:CDS |
| TGTCGTTGAGTCCGGTCTGA+AGG | 0.549615 | 3.4:+99643945 | MS.gene063139:CDS |
| ATCAATGCAAGAAAATCGTA+TGG | 0.556779 | 3.4:-99644123 | None:intergenic |
| ATATTTACGGATGACATCTC+CGG | 0.558092 | 3.4:-99640936 | None:intergenic |
| CCTGTTATTGAAGGCTCTGG+AGG | 0.564575 | 3.4:+99644147 | MS.gene063139:CDS |
| GGAAAGGACATCAACTCCGA+TGG | 0.565742 | 3.4:+99644184 | MS.gene063139:CDS |
| AGGAGGCGAAGATGAGGTGG+AGG | 0.566097 | 3.4:-99640864 | None:intergenic |
| ACTACATACATGGCATGAGA+AGG | 0.566117 | 3.4:-99641163 | None:intergenic |
| TCAATCCGCTGAGGAAGCTA+TGG | 0.566288 | 3.4:+99641117 | MS.gene063139:CDS |
| ATACTTGTTGCGATTGAAAG+TGG | 0.568576 | 3.4:-99644216 | None:intergenic |
| GAGAAGTGATTGAGTTGGTG+AGG | 0.573075 | 3.4:-99640884 | None:intergenic |
| AGGGAAATTGTCAAGTATGA+CGG | 0.576179 | 3.4:-99641143 | None:intergenic |
| CGTCGGAGAAGTGATTGAGT+TGG | 0.585283 | 3.4:-99640889 | None:intergenic |
| CTACATACATGGCATGAGAA+GGG | 0.587143 | 3.4:-99641162 | None:intergenic |
| AAGGTCCGCACAAGTGCGCG+TGG | 0.587579 | 3.4:-99642739 | None:intergenic |
| TTGGTGAGGAGGCGAAGATG+AGG | 0.591125 | 3.4:-99640870 | None:intergenic |
| AGTGTCCACGCGCACTTGTG+CGG | 0.600150 | 3.4:+99642734 | MS.gene063139:CDS |
| GAAAGGACATCAACTCCGAT+GGG | 0.610241 | 3.4:+99644185 | MS.gene063139:CDS |
| GGCGGCTTTATTAGCGACGT+CGG | 0.614790 | 3.4:-99640906 | None:intergenic |
| CTCAGCGGATTGATCAGCAA+TGG | 0.622443 | 3.4:-99641107 | None:intergenic |
| GGAACTAAGAGCTTTATCAC+TGG | 0.625155 | 3.4:+99641993 | MS.gene063139:CDS |
| CAGGTTGATCAATTATGCCA+AGG | 0.625843 | 3.4:-99642653 | None:intergenic |
| AGTACGGAATACCTTCAGAC+CGG | 0.643132 | 3.4:-99643956 | None:intergenic |
| ATTTATCCGTGTTAGAGACA+AGG | 0.644402 | 3.4:+99643003 | MS.gene063139:CDS |
| AAAGTGGTGAAGCTTCCCAT+CGG | 0.647770 | 3.4:-99644200 | None:intergenic |
| GGTGTCATAACTGATTGGAA+AGG | 0.656001 | 3.4:+99644168 | MS.gene063139:CDS |
| AACAGACCTTGTCTCTAACA+CGG | 0.678950 | 3.4:-99643009 | None:intergenic |
| AGGCTCTAGATTCATTACAA+TGG | 0.681171 | 3.4:+99644647 | MS.gene063139:CDS |
| CATTGCTGATCAATCCGCTG+AGG | 0.709748 | 3.4:+99641108 | MS.gene063139:CDS |
| TTTACGGATGACATCTCCGG+CGG | 0.710560 | 3.4:-99640933 | None:intergenic |
| GGAAACCATAGCTTCCTCAG+CGG | 0.774815 | 3.4:-99641122 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACATAAAAATATAACAAAT+AGG | + | chr3.4:99644300-99644319 | MS.gene063139:intron | 10.0% |
| !!! | TTGTTATATTTTTATGTATA+AGG | - | chr3.4:99644298-99644317 | None:intergenic | 10.0% |
| !! | AAACCTAGATATATATAATT+TGG | - | chr3.4:99643817-99643836 | None:intergenic | 15.0% |
| !! | AACCTAGATATATATAATTT+GGG | - | chr3.4:99643816-99643835 | None:intergenic | 15.0% |
| !! | AGATGATTAAAACAATATTT+GGG | + | chr3.4:99644045-99644064 | MS.gene063139:intron | 15.0% |
| !!! | AAACTTTAAGTTTTTAAGTT+TGG | + | chr3.4:99642613-99642632 | MS.gene063139:intron | 15.0% |
| !!! | ACATTTTATTCAATCTAAAA+GGG | + | chr3.4:99644411-99644430 | MS.gene063139:intron | 15.0% |
| !!! | TATTTCTTCTGAAATATTTA+CGG | - | chr3.4:99640952-99640971 | None:intergenic | 15.0% |
| !! | ATATGTGTAGCTAAAATATA+AGG | - | chr3.4:99642501-99642520 | None:intergenic | 20.0% |
| !! | ATTAATACTCTATTTATGAC+AGG | - | chr3.4:99643634-99643653 | None:intergenic | 20.0% |
| !! | CAATAGCAATAAAAAAAGTT+AGG | - | chr3.4:99641206-99641225 | None:intergenic | 20.0% |
| !! | CAGATGATTAAAACAATATT+TGG | + | chr3.4:99644044-99644063 | MS.gene063139:intron | 20.0% |
| !! | CATATGAATTGTAAAATTCA+TGG | - | chr3.4:99642904-99642923 | None:intergenic | 20.0% |
| !! | GTTCAAAATCATCATTAAAA+GGG | - | chr3.4:99643263-99643282 | None:intergenic | 20.0% |
| !! | TAACGTATTACAAAGTTAAA+AGG | + | chr3.4:99642233-99642252 | MS.gene063139:intron | 20.0% |
| !! | TAGAAATTAAAATAGTGCAT+AGG | - | chr3.4:99643712-99643731 | None:intergenic | 20.0% |
| !! | TGTTCAAAATCATCATTAAA+AGG | - | chr3.4:99643264-99643283 | None:intergenic | 20.0% |
| !! | TTAATACTCTATTTATGACA+GGG | - | chr3.4:99643633-99643652 | None:intergenic | 20.0% |
| !! | TTCAAAATCATCATTAAAAG+GGG | - | chr3.4:99643262-99643281 | None:intergenic | 20.0% |
| !! | TTCAAACCAAATAAATGATT+GGG | - | chr3.4:99643406-99643425 | None:intergenic | 20.0% |
| !! | TTCCCAAATTATATATATCT+AGG | + | chr3.4:99643811-99643830 | MS.gene063139:intron | 20.0% |
| !!! | ATCACCTCATTAATATTTTT+CGG | + | chr3.4:99642027-99642046 | MS.gene063139:intron | 20.0% |
| !!! | CACATTTTATTCAATCTAAA+AGG | + | chr3.4:99644410-99644429 | MS.gene063139:intron | 20.0% |
| !!! | CATGAATTTTACAATTCATA+TGG | + | chr3.4:99642902-99642921 | MS.gene063139:intron | 20.0% |
| !!! | TTTTTTTTTGACAACAAAAG+TGG | + | chr3.4:99644347-99644366 | MS.gene063139:intron | 20.0% |
| ! | AAAACACAATTGACAAAAGA+TGG | + | chr3.4:99643283-99643302 | MS.gene063139:intron | 25.0% |
| ! | AAACACAATTGACAAAAGAT+GGG | + | chr3.4:99643284-99643303 | MS.gene063139:intron | 25.0% |
| ! | AAAGATTAGACAATAGAGTA+CGG | - | chr3.4:99643975-99643994 | None:intergenic | 25.0% |
| ! | AATATGCCCAATCATTTATT+TGG | + | chr3.4:99643397-99643416 | MS.gene063139:intron | 25.0% |
| ! | AATCGCTCAAAAATAAAAGA+AGG | + | chr3.4:99643313-99643332 | MS.gene063139:intron | 25.0% |
| ! | ACAAAATCTTTCATGACTTA+AGG | - | chr3.4:99644529-99644548 | None:intergenic | 25.0% |
| ! | ACAAACAAGTTAATCCAAAA+AGG | + | chr3.4:99641737-99641756 | MS.gene063139:intron | 25.0% |
| ! | ATCGCTCAAAAATAAAAGAA+GGG | + | chr3.4:99643314-99643333 | MS.gene063139:intron | 25.0% |
| ! | ATTATTTGAATGTCTTCCTT+GGG | + | chr3.4:99644081-99644100 | MS.gene063139:intron | 25.0% |
| ! | CAGGTTAAAATTCCATTATA+TGG | + | chr3.4:99643874-99643893 | MS.gene063139:intron | 25.0% |
| ! | CTAAGAATGAATTAGGAATA+AGG | - | chr3.4:99644275-99644294 | None:intergenic | 25.0% |
| ! | CTTCAAACCAAATAAATGAT+TGG | - | chr3.4:99643407-99643426 | None:intergenic | 25.0% |
| ! | TACAAAATGTTGTCAAATAG+TGG | + | chr3.4:99643532-99643551 | MS.gene063139:intron | 25.0% |
| ! | TATAAGGCTAAGAATGAATT+AGG | - | chr3.4:99644282-99644301 | None:intergenic | 25.0% |
| ! | TCAAAATCATCATTAAAAGG+GGG | - | chr3.4:99643261-99643280 | None:intergenic | 25.0% |
| ! | TTATCATATAGAAACTGTTC+CGG | - | chr3.4:99641501-99641520 | None:intergenic | 25.0% |
| ! | TTCATGATATAAGTTTGCAA+AGG | - | chr3.4:99642798-99642817 | None:intergenic | 25.0% |
| !! | ATTTCTTTTGTATCCATTTC+AGG | + | chr3.4:99642093-99642112 | MS.gene063139:intron | 25.0% |
| !! | TTAAAATAGTGCATAGGTTT+TGG | - | chr3.4:99643706-99643725 | None:intergenic | 25.0% |
| !! | TTTCTTTTGTATCCATTTCA+GGG | + | chr3.4:99642094-99642113 | MS.gene063139:intron | 25.0% |
| !!! | ATCATTTATTTGGTTTGAAG+AGG | + | chr3.4:99643407-99643426 | MS.gene063139:intron | 25.0% |
| !!! | ATTTTTTTTGCCAACAAAAG+TGG | + | chr3.4:99644387-99644406 | MS.gene063139:intron | 25.0% |
| !!! | TCAGTTACTTTTACTTCATT+CGG | + | chr3.4:99644548-99644567 | MS.gene063139:intron | 25.0% |
| !!! | TTTATCTACTGCTTTTAACA+TGG | + | chr3.4:99642875-99642894 | MS.gene063139:intron | 25.0% |
| AAAGAAATTAAGTCAGCGTT+TGG | - | chr3.4:99644488-99644507 | None:intergenic | 30.0% | |
| AAATCTTTCATGACTTAAGG+TGG | - | chr3.4:99644526-99644545 | None:intergenic | 30.0% | |
| AAATGTGACCACCTTTATAT+AGG | + | chr3.4:99641375-99641394 | MS.gene063139:intron | 30.0% | |
| AACACAATTGACAAAAGATG+GGG | + | chr3.4:99643285-99643304 | MS.gene063139:intron | 30.0% | |
| AACCTGTGTTAAAAGAAAGA+TGG | + | chr3.4:99642670-99642689 | MS.gene063139:CDS | 30.0% | |
| AATGTGACCACCTTTATATA+GGG | + | chr3.4:99641376-99641395 | MS.gene063139:intron | 30.0% | |
| ACAACATTAAAACCTGTCAT+AGG | - | chr3.4:99644598-99644617 | None:intergenic | 30.0% | |
| AGAGTAACTAACTACATACA+TGG | - | chr3.4:99641176-99641195 | None:intergenic | 30.0% | |
| AGGATGAAAAGTAAGAAAAG+TGG | + | chr3.4:99644320-99644339 | MS.gene063139:intron | 30.0% | |
| ATAGCAACACTATAGCATAA+GGG | + | chr3.4:99643468-99643487 | MS.gene063139:intron | 30.0% | |
| ATCAATGCAAGAAAATCGTA+TGG | - | chr3.4:99644126-99644145 | None:intergenic | 30.0% | |
| ATGACTCACAAGATTCTTAA+AGG | - | chr3.4:99644011-99644030 | None:intergenic | 30.0% | |
| ATGTCTTTGTCAAAACTTCA+TGG | - | chr3.4:99642306-99642325 | None:intergenic | 30.0% | |
| ATTACATTGTAGACAAACTG+AGG | + | chr3.4:99642527-99642546 | MS.gene063139:intron | 30.0% | |
| CAAAATCATCATTAAAAGGG+GGG | - | chr3.4:99643260-99643279 | None:intergenic | 30.0% | |
| CACCAAATAAATTGCAGTTA+CGG | + | chr3.4:99641903-99641922 | MS.gene063139:intron | 30.0% | |
| CAGTTTGTCTACAATGTAAT+TGG | - | chr3.4:99642527-99642546 | None:intergenic | 30.0% | |
| CATACAAATATGCTTGAGAA+AGG | - | chr3.4:99642761-99642780 | None:intergenic | 30.0% | |
| CATTATTTGAATGTCTTCCT+TGG | + | chr3.4:99644080-99644099 | MS.gene063139:intron | 30.0% | |
| CGATTTCAAAATATGGGTAT+GGG | - | chr3.4:99643124-99643143 | None:intergenic | 30.0% | |
| CGCATACAAACATATATATG+TGG | + | chr3.4:99642473-99642492 | MS.gene063139:intron | 30.0% | |
| CTGACCGAAAAATATTAATG+AGG | - | chr3.4:99642034-99642053 | None:intergenic | 30.0% | |
| CTGACTTAATTTCTTTCTCT+TGG | + | chr3.4:99644492-99644511 | MS.gene063139:intron | 30.0% | |
| GTACTCTATTGTCTAATCTT+TGG | + | chr3.4:99643974-99643993 | MS.gene063139:intron | 30.0% | |
| GTGTTAAAAGAAAGATGGAT+TGG | + | chr3.4:99642675-99642694 | MS.gene063139:CDS | 30.0% | |
| TAAGCATAAGCTGTATTCAT+AGG | + | chr3.4:99641671-99641690 | MS.gene063139:intron | 30.0% | |
| TAGCAATCACAACCATATAA+TGG | - | chr3.4:99643889-99643908 | None:intergenic | 30.0% | |
| TATAGCAACACTATAGCATA+AGG | + | chr3.4:99643467-99643486 | MS.gene063139:intron | 30.0% | |
| TATCATGAACAATTCTTGAG+TGG | + | chr3.4:99642809-99642828 | MS.gene063139:intron | 30.0% | |
| TCGCTCAAAAATAAAAGAAG+GGG | + | chr3.4:99643315-99643334 | MS.gene063139:intron | 30.0% | |
| TTGGAATTGGAATTGGAATT+TGG | + | chr3.4:99641806-99641825 | MS.gene063139:intron | 30.0% | |
| TTTATGTGTCAATTTCAGTG+TGG | - | chr3.4:99642341-99642360 | None:intergenic | 30.0% | |
| TTTCCCCGATTTCAAAATAT+GGG | - | chr3.4:99643130-99643149 | None:intergenic | 30.0% | |
| TTTCTGCACTGTTAACATAA+AGG | + | chr3.4:99643039-99643058 | MS.gene063139:intron | 30.0% | |
| TTTGACAAAGACATAGAAAC+TGG | + | chr3.4:99642312-99642331 | MS.gene063139:intron | 30.0% | |
| ! | AAAGTACAGAATCTAGAATC+TGG | - | chr3.4:99641852-99641871 | None:intergenic | 30.0% |
| ! | ATCCATCTTTCTTTTAACAC+AGG | - | chr3.4:99642675-99642694 | None:intergenic | 30.0% |
| ! | TATTCATAGGTTTTCTCAGA+CGG | + | chr3.4:99641684-99641703 | MS.gene063139:intron | 30.0% |
| ! | TTTCCTTTTTATCAGATCCT+TGG | + | chr3.4:99642636-99642655 | MS.gene063139:intron | 30.0% |
| ! | TTTTCCCCGATTTCAAAATA+TGG | - | chr3.4:99643131-99643150 | None:intergenic | 30.0% |
| !! | ACAAGACAACTTGTTTTCTT+TGG | - | chr3.4:99644443-99644462 | None:intergenic | 30.0% |
| !! | TATGACAGGTTTTAATGTTG+TGG | + | chr3.4:99644597-99644616 | MS.gene063139:intron | 30.0% |
| !! | TTCAAGTTTAAGAGCCTTTT+TGG | - | chr3.4:99641754-99641773 | None:intergenic | 30.0% |
| !!! | ATAAAATGTGCCACTTTTGT+TGG | - | chr3.4:99644400-99644419 | None:intergenic | 30.0% |
| !!! | ATACCCATATTTTGAAATCG+GGG | + | chr3.4:99643124-99643143 | MS.gene063139:intron | 30.0% |
| !!! | ATTTCATTTTTTCTCTACCC+AGG | + | chr3.4:99642936-99642955 | MS.gene063139:intron | 30.0% |
| !!! | CATACCCATATTTTGAAATC+GGG | + | chr3.4:99643123-99643142 | MS.gene063139:intron | 30.0% |
| !!! | CCATACCCATATTTTGAAAT+CGG | + | chr3.4:99643122-99643141 | MS.gene063139:intron | 30.0% |
| AAAATCCGTCAAATTGGGTT+TGG | + | chr3.4:99643173-99643192 | MS.gene063139:intron | 35.0% | |
| AAAGTAGTGTAGTGTGTACA+AGG | + | chr3.4:99641313-99641332 | MS.gene063139:intron | 35.0% | |
| AAATAAGGGTTTCCCTGAAA+TGG | - | chr3.4:99642109-99642128 | None:intergenic | 35.0% | |
| AACAATTCTTGAGTGGAAGA+GGG | + | chr3.4:99642816-99642835 | MS.gene063139:intron | 35.0% | |
| AAGCTCTTAGTTCCATCAAT+AGG | - | chr3.4:99641987-99642006 | None:intergenic | 35.0% | |
| AATCACTTAACCAGTAAAGG+TGG | - | chr3.4:99643682-99643701 | None:intergenic | 35.0% | |
| ACAATTAGCAAAAGATAGGG+GGG | + | chr3.4:99643349-99643368 | MS.gene063139:intron | 35.0% | |
| ACACACTACACTACTTTGAT+TGG | - | chr3.4:99641310-99641329 | None:intergenic | 35.0% | |
| AGGGAAATTGTCAAGTATGA+CGG | - | chr3.4:99641146-99641165 | None:intergenic | 35.0% | |
| ATACGTTAAGAAAAGCGACT+AGG | - | chr3.4:99642221-99642240 | None:intergenic | 35.0% | |
| ATATTTACGGATGACATCTC+CGG | - | chr3.4:99640939-99640958 | None:intergenic | 35.0% | |
| ATCAACAAAATGCAGAAGAC+AGG | - | chr3.4:99641780-99641799 | None:intergenic | 35.0% | |
| ATGCCAAGGATCTGATAAAA+AGG | - | chr3.4:99642642-99642661 | None:intergenic | 35.0% | |
| ATGTGACCACCTTTATATAG+GGG | + | chr3.4:99641377-99641396 | MS.gene063139:intron | 35.0% | |
| ATTCTACATACGCATTCAAG+CGG | - | chr3.4:99642191-99642210 | None:intergenic | 35.0% | |
| ATTTATCCGTGTTAGAGACA+AGG | + | chr3.4:99643003-99643022 | MS.gene063139:CDS | 35.0% | |
| ATTTCAGGGAAACCCTTATT+TGG | + | chr3.4:99642108-99642127 | MS.gene063139:intron | 35.0% | |
| CACAATTAGCAAAAGATAGG+GGG | + | chr3.4:99643348-99643367 | MS.gene063139:intron | 35.0% | |
| CATCTCCACTAAAAAGATGT+GGG | - | chr3.4:99642973-99642992 | None:intergenic | 35.0% | |
| CCGATTTCAAAATATGGGTA+TGG | - | chr3.4:99643125-99643144 | None:intergenic | 35.0% | |
| CGCACAATTAGCAAAAGATA+GGG | + | chr3.4:99643346-99643365 | MS.gene063139:intron | 35.0% | |
| CTCCGTAACTGCAATTTATT+TGG | - | chr3.4:99641908-99641927 | None:intergenic | 35.0% | |
| CTTAATGAATTGCCTATGAC+AGG | + | chr3.4:99644583-99644602 | MS.gene063139:intron | 35.0% | |
| GAGATGAGATAGTTACTTAC+TGG | - | chr3.4:99642165-99642184 | None:intergenic | 35.0% | |
| GATGCTATTCCTTTATCATC+TGG | + | chr3.4:99641278-99641297 | MS.gene063139:intron | 35.0% | |
| GCACAATTAGCAAAAGATAG+GGG | + | chr3.4:99643347-99643366 | MS.gene063139:intron | 35.0% | |
| GGAAAGAGAACTACACTAAA+TGG | + | chr3.4:99642705-99642724 | MS.gene063139:CDS | 35.0% | |
| GGAAATCACTTAACCAGTAA+AGG | - | chr3.4:99643685-99643704 | None:intergenic | 35.0% | |
| TCGCACAATTAGCAAAAGAT+AGG | + | chr3.4:99643345-99643364 | MS.gene063139:intron | 35.0% | |
| TGACAAACAGATTCATCAAC+AGG | + | chr3.4:99644627-99644646 | MS.gene063139:CDS | 35.0% | |
| TGGGTATTAGATCCTATTGA+TGG | + | chr3.4:99641972-99641991 | MS.gene063139:CDS | 35.0% | |
| TGGTTTACACCAGATGATAA+AGG | - | chr3.4:99641290-99641309 | None:intergenic | 35.0% | |
| TGTTAACATAAAGGCAGTAC+TGG | + | chr3.4:99643048-99643067 | MS.gene063139:intron | 35.0% | |
| TTCAAAATATGGGTATGGGA+CGG | - | chr3.4:99643120-99643139 | None:intergenic | 35.0% | |
| TTCTATCATTTGCACTCTTC+AGG | + | chr3.4:99643855-99643874 | MS.gene063139:intron | 35.0% | |
| ! | AACAAGGATGTTTTCGAAAC+TGG | + | chr3.4:99642841-99642860 | MS.gene063139:intron | 35.0% |
| ! | AGCAAGGATTATGGGTTATT+GGG | + | chr3.4:99641464-99641483 | MS.gene063139:intron | 35.0% |
| ! | ATACTTGTTGCGATTGAAAG+TGG | - | chr3.4:99644219-99644238 | None:intergenic | 35.0% |
| ! | CTCATTGCTCTTTTGCAAAA+TGG | + | chr3.4:99642135-99642154 | MS.gene063139:CDS | 35.0% |
| ! | GATTGGGCATATTTTATCCT+TGG | - | chr3.4:99643390-99643409 | None:intergenic | 35.0% |
| ! | GCATTGATACCTGTTATTGA+AGG | + | chr3.4:99644138-99644157 | MS.gene063139:CDS | 35.0% |
| ! | GCATTTTGTTGATGTGGATT+TGG | + | chr3.4:99641787-99641806 | MS.gene063139:intron | 35.0% |
| ! | TAGCAAGGATTATGGGTTAT+TGG | + | chr3.4:99641463-99641482 | MS.gene063139:intron | 35.0% |
| ! | TCTTCTGCATTTTGTTGATG+TGG | + | chr3.4:99641781-99641800 | MS.gene063139:intron | 35.0% |
| ! | TGTGGATTTGGAATTGGAAT+TGG | + | chr3.4:99641799-99641818 | MS.gene063139:intron | 35.0% |
| ! | TGTTGATGTGGATTTGGAAT+TGG | + | chr3.4:99641793-99641812 | MS.gene063139:intron | 35.0% |
| !! | AAGACAGTGCTGATTATGTT+TGG | + | chr3.4:99641952-99641971 | MS.gene063139:CDS | 35.0% |
| !! | AGACAGTGCTGATTATGTTT+GGG | + | chr3.4:99641953-99641972 | MS.gene063139:CDS | 35.0% |
| !! | AGCAATGAGAGTACCAAATA+AGG | - | chr3.4:99642124-99642143 | None:intergenic | 35.0% |
| !! | AGGCTCTAGATTCATTACAA+TGG | + | chr3.4:99644647-99644666 | MS.gene063139:CDS | 35.0% |
| !! | GAAAGATGGATTGGAATAAC+TGG | + | chr3.4:99642684-99642703 | MS.gene063139:CDS | 35.0% |
| !! | GCAATGAGAGTACCAAATAA+GGG | - | chr3.4:99642123-99642142 | None:intergenic | 35.0% |
| !! | TTTAAATTACTGAAGCGCTG+AGG | + | chr3.4:99641869-99641888 | MS.gene063139:intron | 35.0% |
| AACAGACCTTGTCTCTAACA+CGG | - | chr3.4:99643012-99643031 | None:intergenic | 40.0% | |
| ACTACATACATGGCATGAGA+AGG | - | chr3.4:99641166-99641185 | None:intergenic | 40.0% | |
| ACTTCATGGTGTGAATCAGT+TGG | - | chr3.4:99642292-99642311 | None:intergenic | 40.0% | |
| ATACCTGTTATTGAAGGCTC+TGG | + | chr3.4:99644144-99644163 | MS.gene063139:CDS | 40.0% | |
| ATATAGAAACTGTTCCGGAC+TGG | - | chr3.4:99641496-99641515 | None:intergenic | 40.0% | |
| ATCATTAAAAGGGGGGAAAG+GGG | - | chr3.4:99643253-99643272 | None:intergenic | 40.0% | |
| CAACGTGTGTCAGTATACAT+GGG | - | chr3.4:99642408-99642427 | None:intergenic | 40.0% | |
| CAATTAGCAAAAGATAGGGG+GGG | + | chr3.4:99643350-99643369 | MS.gene063139:intron | 40.0% | |
| CAGGGAAAATCCGTCAAATT+GGG | + | chr3.4:99643168-99643187 | MS.gene063139:intron | 40.0% | |
| CATCATTAAAAGGGGGGAAA+GGG | - | chr3.4:99643254-99643273 | None:intergenic | 40.0% | |
| CCTTCAGTAGCAAGGATTAT+GGG | + | chr3.4:99641456-99641475 | MS.gene063139:intron | 40.0% | |
| CTACATACATGGCATGAGAA+GGG | - | chr3.4:99641165-99641184 | None:intergenic | 40.0% | |
| GAACAATTCTTGAGTGGAAG+AGG | + | chr3.4:99642815-99642834 | MS.gene063139:intron | 40.0% | |
| GCATCTCCACTAAAAAGATG+TGG | - | chr3.4:99642974-99642993 | None:intergenic | 40.0% | |
| GGGAAAATGCAATTAAGCCA+AGG | + | chr3.4:99643370-99643389 | MS.gene063139:intron | 40.0% | |
| GTTACGGAGAAGAAAAAGGA+TGG | + | chr3.4:99641919-99641938 | MS.gene063139:intron | 40.0% | |
| TAATCCTTGCTACTGAAGGA+TGG | - | chr3.4:99641455-99641474 | None:intergenic | 40.0% | |
| TATAGAAACTGTTCCGGACT+GGG | - | chr3.4:99641495-99641514 | None:intergenic | 40.0% | |
| TCAAAATATGGGTATGGGAC+GGG | - | chr3.4:99643119-99643138 | None:intergenic | 40.0% | |
| TCAACGTGTGTCAGTATACA+TGG | - | chr3.4:99642409-99642428 | None:intergenic | 40.0% | |
| TCATCATTAAAAGGGGGGAA+AGG | - | chr3.4:99643255-99643274 | None:intergenic | 40.0% | |
| TCCTTCAGTAGCAAGGATTA+TGG | + | chr3.4:99641455-99641474 | MS.gene063139:intron | 40.0% | |
| TGAAGTACAAAGTTCACCCA+AGG | - | chr3.4:99644100-99644119 | None:intergenic | 40.0% | |
| TGCAGTTACGGAGAAGAAAA+AGG | + | chr3.4:99641915-99641934 | MS.gene063139:intron | 40.0% | |
| TTAAGTCAGCGTTTGGCAAT+CGG | - | chr3.4:99644481-99644500 | None:intergenic | 40.0% | |
| TTCCATCAAGAAGAGTAGCT+CGG | - | chr3.4:99641345-99641364 | None:intergenic | 40.0% | |
| TTGTACTAAATTGCGCACAG+TGG | - | chr3.4:99643517-99643536 | None:intergenic | 40.0% | |
| ! | AACATAAAGGCAGTACTGGA+CGG | + | chr3.4:99643052-99643071 | MS.gene063139:intron | 40.0% |
| ! | ACAAGCCCACATCTTTTTAG+TGG | + | chr3.4:99642965-99642984 | MS.gene063139:CDS | 40.0% |
| ! | GGAACTAAGAGCTTTATCAC+TGG | + | chr3.4:99641993-99642012 | MS.gene063139:CDS | 40.0% |
| ! | GGTGTCATAACTGATTGGAA+AGG | + | chr3.4:99644168-99644187 | MS.gene063139:CDS | 40.0% |
| ! | TTTTAGTGGAGATGCAGAAG+AGG | + | chr3.4:99642979-99642998 | MS.gene063139:CDS | 40.0% |
| !! | ATTACTGACTCCACCTTTAC+TGG | + | chr3.4:99643669-99643688 | MS.gene063139:intron | 40.0% |
| !! | CAGGTTGATCAATTATGCCA+AGG | - | chr3.4:99642656-99642675 | None:intergenic | 40.0% |
| !! | GACAGGTTTTAATGTTGTGG+CGG | + | chr3.4:99644600-99644619 | MS.gene063139:intron | 40.0% |
| !!! | TCTCTTGTCTTCTGGTTTTG+TGG | + | chr3.4:99643918-99643937 | MS.gene063139:CDS | 40.0% |
| AAAGTGGTGAAGCTTCCCAT+CGG | - | chr3.4:99644203-99644222 | None:intergenic | 45.0% | |
| ACGGAGAAGAAAAAGGATGG+AGG | + | chr3.4:99641922-99641941 | MS.gene063139:CDS | 45.0% | |
| AGCATGGCTCCCCTATATAA+AGG | - | chr3.4:99641389-99641408 | None:intergenic | 45.0% | |
| AGTACGGAATACCTTCAGAC+CGG | - | chr3.4:99643959-99643978 | None:intergenic | 45.0% | |
| ATGGCTCCCCTATATAAAGG+TGG | - | chr3.4:99641386-99641405 | None:intergenic | 45.0% | |
| CACAGGAGTCAATTACAGCA+TGG | - | chr3.4:99641405-99641424 | None:intergenic | 45.0% | |
| CAGTTTACAGTGCTGTGAAC+TGG | + | chr3.4:99643739-99643758 | MS.gene063139:intron | 45.0% | |
| CCCATAATCCTTGCTACTGA+AGG | - | chr3.4:99641459-99641478 | None:intergenic | 45.0% | |
| CCGAACCAAACCCAATTTGA+CGG | - | chr3.4:99643181-99643200 | None:intergenic | 45.0% | |
| CGTTTGGCAATCGGATGAAA+TGG | - | chr3.4:99644472-99644491 | None:intergenic | 45.0% | |
| GAAAGGACATCAACTCCGAT+GGG | + | chr3.4:99644185-99644204 | MS.gene063139:CDS | 45.0% | |
| GATTGATCAGCAATGGTGAC+AGG | - | chr3.4:99641103-99641122 | None:intergenic | 45.0% | |
| GCAACAAACATCATACCCGT+GGG | - | chr3.4:99643211-99643230 | None:intergenic | 45.0% | |
| GCAGGGAAAATCCGTCAAAT+TGG | + | chr3.4:99643167-99643186 | MS.gene063139:intron | 45.0% | |
| GCATATGCTCTCTTGTCTTC+TGG | + | chr3.4:99643910-99643929 | MS.gene063139:CDS | 45.0% | |
| TGAGTGGAAGAGGGATAACA+AGG | + | chr3.4:99642825-99642844 | MS.gene063139:intron | 45.0% | |
| TTATTGGGTGAAACCCAGTC+CGG | + | chr3.4:99641479-99641498 | MS.gene063139:intron | 45.0% | |
| TTCCGAGCTACTCTTCTTGA+TGG | + | chr3.4:99641340-99641359 | MS.gene063139:intron | 45.0% | |
| ! | ACATAAAGGCAGTACTGGAC+GGG | + | chr3.4:99643053-99643072 | MS.gene063139:intron | 45.0% |
| ! | CCGTCAAATTGGGTTTGGTT+CGG | + | chr3.4:99643178-99643197 | MS.gene063139:intron | 45.0% |
| ! | CGTCAAATTGGGTTTGGTTC+GGG | + | chr3.4:99643179-99643198 | MS.gene063139:intron | 45.0% |
| ! | GAAGTATCTTGAACAGCTCG+CGG | + | chr3.4:99641640-99641659 | MS.gene063139:intron | 45.0% |
| ! | GCTGTGAACTGGTCTATGTA+TGG | + | chr3.4:99643750-99643769 | MS.gene063139:intron | 45.0% |
| ! | GGATTTTCCCTGCTTTGACT+GGG | - | chr3.4:99643160-99643179 | None:intergenic | 45.0% |
| !! | AACAGTTAGCACTGACACCT+CGG | - | chr3.4:99642452-99642471 | None:intergenic | 45.0% |
| !! | AAGTGATTGAGTTGGTGAGG+AGG | - | chr3.4:99640884-99640903 | None:intergenic | 45.0% |
| !! | CTGGAGGTGTCATAACTGAT+TGG | + | chr3.4:99644163-99644182 | MS.gene063139:CDS | 45.0% |
| !! | GAGAAGTGATTGAGTTGGTG+AGG | - | chr3.4:99640887-99640906 | None:intergenic | 45.0% |
| AACCCAAACCCAGTCAAAGC+AGG | + | chr3.4:99643149-99643168 | MS.gene063139:intron | 50.0% | |
| AAGGATGGACAGAGGACTTC+TGG | - | chr3.4:99641440-99641459 | None:intergenic | 50.0% | |
| ACCCAAACCCAGTCAAAGCA+GGG | + | chr3.4:99643150-99643169 | MS.gene063139:intron | 50.0% | |
| ATGTGGGCTTGTAGTGTACC+TGG | - | chr3.4:99642957-99642976 | None:intergenic | 50.0% | |
| CATTGCTGATCAATCCGCTG+AGG | + | chr3.4:99641108-99641127 | MS.gene063139:CDS | 50.0% | |
| CCTCCAGAGCCTTCAATAAC+AGG | - | chr3.4:99644150-99644169 | None:intergenic | 50.0% | |
| CGTCGGAGAAGTGATTGAGT+TGG | - | chr3.4:99640892-99640911 | None:intergenic | 50.0% | |
| CTGTCCATCCTTCAGTAGCA+AGG | + | chr3.4:99641448-99641467 | MS.gene063139:intron | 50.0% | |
| GAAAGGGGACAAAAGATGGG+GGG | - | chr3.4:99643238-99643257 | None:intergenic | 50.0% | |
| GGAAACCATAGCTTCCTCAG+CGG | - | chr3.4:99641125-99641144 | None:intergenic | 50.0% | |
| GGAAAGGACATCAACTCCGA+TGG | + | chr3.4:99644184-99644203 | MS.gene063139:CDS | 50.0% | |
| GGAAAGGGGACAAAAGATGG+GGG | - | chr3.4:99643239-99643258 | None:intergenic | 50.0% | |
| GGCAACAAACATCATACCCG+TGG | - | chr3.4:99643212-99643231 | None:intergenic | 50.0% | |
| GGGAAAGGGGACAAAAGATG+GGG | - | chr3.4:99643240-99643259 | None:intergenic | 50.0% | |
| GGGGAAAGGGGACAAAAGAT+GGG | - | chr3.4:99643241-99643260 | None:intergenic | 50.0% | |
| GTGGATCTTGTCGTTGAGTC+CGG | + | chr3.4:99643937-99643956 | MS.gene063139:CDS | 50.0% | |
| TATGGGTATGGGACGGGTAA+CGG | - | chr3.4:99643113-99643132 | None:intergenic | 50.0% | |
| TCAATCCGCTGAGGAAGCTA+TGG | + | chr3.4:99641117-99641136 | MS.gene063139:CDS | 50.0% | |
| TCCCTGCTTTGACTGGGTTT+GGG | - | chr3.4:99643154-99643173 | None:intergenic | 50.0% | |
| TGCTACTGAAGGATGGACAG+AGG | - | chr3.4:99641448-99641467 | None:intergenic | 50.0% | |
| TGTGGGCTTGTAGTGTACCT+GGG | - | chr3.4:99642956-99642975 | None:intergenic | 50.0% | |
| TTCCCTGCTTTGACTGGGTT+TGG | - | chr3.4:99643155-99643174 | None:intergenic | 50.0% | |
| TTTACGGATGACATCTCCGG+CGG | - | chr3.4:99640936-99640955 | None:intergenic | 50.0% | |
| ! | AACAAACCGCCTTTTCCCTC+GGG | + | chr3.4:99643594-99643613 | MS.gene063139:intron | 50.0% |
| ! | CCTGTTATTGAAGGCTCTGG+AGG | + | chr3.4:99644147-99644166 | MS.gene063139:CDS | 50.0% |
| ! | CGGATTTTCCCTGCTTTGAC+TGG | - | chr3.4:99643161-99643180 | None:intergenic | 50.0% |
| ! | GAACAAACCGCCTTTTCCCT+CGG | + | chr3.4:99643593-99643612 | MS.gene063139:intron | 50.0% |
| ! | TACTGGACGGGTTTGGGTAT+GGG | + | chr3.4:99643065-99643084 | MS.gene063139:intron | 50.0% |
| !! | AAATTGGGTTTGGTTCGGGC+TGG | + | chr3.4:99643183-99643202 | MS.gene063139:intron | 50.0% |
| !! | AATTACTGAAGCGCTGAGGC+TGG | + | chr3.4:99641873-99641892 | MS.gene063139:intron | 50.0% |
| !! | CTCAGCGGATTGATCAGCAA+TGG | - | chr3.4:99641110-99641129 | None:intergenic | 50.0% |
| !! | GGTTTTAATGTTGTGGCGGC+TGG | + | chr3.4:99644604-99644623 | MS.gene063139:intron | 50.0% |
| !! | TTAGCACTGACACCTCGGAT+TGG | - | chr3.4:99642447-99642466 | None:intergenic | 50.0% |
| ACGGGTTTGGGTATGGGTTC+GGG | + | chr3.4:99643071-99643090 | MS.gene063139:intron | 55.0% | |
| ATGGGTATGGGACGGGTAAC+GGG | - | chr3.4:99643112-99643131 | None:intergenic | 55.0% | |
| CTGCACATACCTCCAATCCG+AGG | + | chr3.4:99642432-99642451 | MS.gene063139:intron | 55.0% | |
| GCTATAGCACTGTTGCGTGG+CGG | + | chr3.4:99643565-99643584 | MS.gene063139:intron | 55.0% | |
| GCTGCTATAGCACTGTTGCG+TGG | + | chr3.4:99643562-99643581 | MS.gene063139:intron | 55.0% | |
| GGGGGAAAGGGGACAAAAGA+TGG | - | chr3.4:99643242-99643261 | None:intergenic | 55.0% | |
| TGCGATTCACTCACTCACGC+AGG | + | chr3.4:99641076-99641095 | MS.gene063139:intron | 55.0% | |
| TGTCGTTGAGTCCGGTCTGA+AGG | + | chr3.4:99643945-99643964 | MS.gene063139:CDS | 55.0% | |
| TTGGTGAGGAGGCGAAGATG+AGG | - | chr3.4:99640873-99640892 | None:intergenic | 55.0% | |
| TTTGGGTATGGGTTCGGGGT+GGG | + | chr3.4:99643076-99643095 | MS.gene063139:intron | 55.0% | |
| ! | AAGGCAGTACTGGACGGGTT+TGG | + | chr3.4:99643058-99643077 | MS.gene063139:intron | 55.0% |
| ! | AGGCAGTACTGGACGGGTTT+GGG | + | chr3.4:99643059-99643078 | MS.gene063139:intron | 55.0% |
| ! | GACGGGTTTGGGTATGGGTT+CGG | + | chr3.4:99643070-99643089 | MS.gene063139:intron | 55.0% |
| ! | GTACTGGACGGGTTTGGGTA+TGG | + | chr3.4:99643064-99643083 | MS.gene063139:intron | 55.0% |
| !! | GGCGGCTTTATTAGCGACGT+CGG | - | chr3.4:99640909-99640928 | None:intergenic | 55.0% |
| AGGAGGCGAAGATGAGGTGG+AGG | - | chr3.4:99640867-99640886 | None:intergenic | 60.0% | |
| AGTGTCCACGCGCACTTGTG+CGG | + | chr3.4:99642734-99642753 | MS.gene063139:CDS | 60.0% | |
| CGGGTTTGGGTATGGGTTCG+GGG | + | chr3.4:99643072-99643091 | MS.gene063139:intron | 60.0% | |
| GGGACAAAAGATGGGGGGCA+TGG | - | chr3.4:99643233-99643252 | None:intergenic | 60.0% | |
| GTGAGGAGGCGAAGATGAGG+TGG | - | chr3.4:99640870-99640889 | None:intergenic | 60.0% | |
| GTTTGGGTATGGGTTCGGGG+TGG | + | chr3.4:99643075-99643094 | MS.gene063139:intron | 60.0% | |
| TGGGTATGGGACGGGTAACG+GGG | - | chr3.4:99643111-99643130 | None:intergenic | 60.0% | |
| ! | GCACTGACACCTCGGATTGG+AGG | - | chr3.4:99642444-99642463 | None:intergenic | 60.0% |
| !! | GGGACGGGTAACGGGGATAT+AGG | - | chr3.4:99643104-99643123 | None:intergenic | 60.0% |
| !! | TTGGTTCGGGCTGGTACCCA+CGG | + | chr3.4:99643192-99643211 | MS.gene063139:intron | 60.0% |
| AAGGTCCGCACAAGTGCGCG+TGG | - | chr3.4:99642742-99642761 | None:intergenic | 65.0% | |
| AATAAAGCCGCCGACGCCGC+CGG | + | chr3.4:99640917-99640936 | MS.gene063139:CDS | 65.0% | |
| CAGTCGCAGCCCGAGGGAAA+AGG | - | chr3.4:99643606-99643625 | None:intergenic | 65.0% | |
| GATGACATCTCCGGCGGCGT+CGG | - | chr3.4:99640930-99640949 | None:intergenic | 65.0% | |
| GGTTGTCAGTCGCAGCCCGA+GGG | - | chr3.4:99643612-99643631 | None:intergenic | 65.0% | |
| TCGCAGCCCGAGGGAAAAGG+CGG | - | chr3.4:99643603-99643622 | None:intergenic | 65.0% | |
| TCTGGTGCGCTCGACTGCAC+AGG | - | chr3.4:99641422-99641441 | None:intergenic | 65.0% | |
| !! | TGGTTCGGGCTGGTACCCAC+GGG | + | chr3.4:99643193-99643212 | MS.gene063139:intron | 65.0% |
| GGGTTGTCAGTCGCAGCCCG+AGG | - | chr3.4:99643613-99643632 | None:intergenic | 70.0% | |
| ! | GACATCTCCGGCGGCGTCGG+CGG | - | chr3.4:99640927-99640946 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 99640860 | 99644672 | 99640860 | ID=MS.gene063139 |
| chr3.4 | mRNA | 99640860 | 99644672 | 99640860 | ID=MS.gene063139.t1;Parent=MS.gene063139 |
| chr3.4 | exon | 99640860 | 99641001 | 99640860 | ID=MS.gene063139.t1.exon1;Parent=MS.gene063139.t1 |
| chr3.4 | CDS | 99640860 | 99641001 | 99640860 | ID=cds.MS.gene063139.t1;Parent=MS.gene063139.t1 |
| chr3.4 | exon | 99641098 | 99641176 | 99641098 | ID=MS.gene063139.t1.exon2;Parent=MS.gene063139.t1 |
| chr3.4 | CDS | 99641098 | 99641176 | 99641098 | ID=cds.MS.gene063139.t1;Parent=MS.gene063139.t1 |
| chr3.4 | exon | 99641920 | 99642014 | 99641920 | ID=MS.gene063139.t1.exon3;Parent=MS.gene063139.t1 |
| chr3.4 | CDS | 99641920 | 99642014 | 99641920 | ID=cds.MS.gene063139.t1;Parent=MS.gene063139.t1 |
| chr3.4 | exon | 99642115 | 99642164 | 99642115 | ID=MS.gene063139.t1.exon4;Parent=MS.gene063139.t1 |
| chr3.4 | CDS | 99642115 | 99642164 | 99642115 | ID=cds.MS.gene063139.t1;Parent=MS.gene063139.t1 |
| chr3.4 | exon | 99642651 | 99642775 | 99642651 | ID=MS.gene063139.t1.exon5;Parent=MS.gene063139.t1 |
| chr3.4 | CDS | 99642651 | 99642775 | 99642651 | ID=cds.MS.gene063139.t1;Parent=MS.gene063139.t1 |
| chr3.4 | exon | 99642958 | 99643024 | 99642958 | ID=MS.gene063139.t1.exon6;Parent=MS.gene063139.t1 |
| chr3.4 | CDS | 99642958 | 99643024 | 99642958 | ID=cds.MS.gene063139.t1;Parent=MS.gene063139.t1 |
| chr3.4 | exon | 99643877 | 99643966 | 99643877 | ID=MS.gene063139.t1.exon7;Parent=MS.gene063139.t1 |
| chr3.4 | CDS | 99643877 | 99643966 | 99643877 | ID=cds.MS.gene063139.t1;Parent=MS.gene063139.t1 |
| chr3.4 | exon | 99644123 | 99644234 | 99644123 | ID=MS.gene063139.t1.exon8;Parent=MS.gene063139.t1 |
| chr3.4 | CDS | 99644123 | 99644234 | 99644123 | ID=cds.MS.gene063139.t1;Parent=MS.gene063139.t1 |
| chr3.4 | exon | 99644605 | 99644672 | 99644605 | ID=MS.gene063139.t1.exon9;Parent=MS.gene063139.t1 |
| chr3.4 | CDS | 99644605 | 99644672 | 99644605 | ID=cds.MS.gene063139.t1;Parent=MS.gene063139.t1 |
| Gene Sequence |
| Protein sequence |
