Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057148.t1 | XP_003608884.1 | 96.1 | 230 | 7 | 1 | 1 | 228 | 1 | 230 | 5.60E-120 | 440.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057148.t1 | P47923 | 87.4 | 231 | 25 | 3 | 1 | 228 | 1 | 230 | 1.0e-106 | 387.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057148.t1 | B7FMP6 | 96.1 | 230 | 7 | 1 | 1 | 228 | 1 | 230 | 4.0e-120 | 440.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049181 | MS.gene057148 | -0.814776 | 1.30E-51 | -1.69E-46 |
| MS.gene049182 | MS.gene057148 | -0.877561 | 5.70E-69 | -1.69E-46 |
| MS.gene050379 | MS.gene057148 | -0.821548 | 3.81E-53 | -1.69E-46 |
| MS.gene05087 | MS.gene057148 | 0.814176 | 1.76E-51 | -1.69E-46 |
| MS.gene051579 | MS.gene057148 | -0.800152 | 1.65E-48 | -1.69E-46 |
| MS.gene052040 | MS.gene057148 | -0.826865 | 2.15E-54 | -1.69E-46 |
| MS.gene054635 | MS.gene057148 | -0.829641 | 4.60E-55 | -1.69E-46 |
| MS.gene054638 | MS.gene057148 | 0.800638 | 1.31E-48 | -1.69E-46 |
| MS.gene055634 | MS.gene057148 | 0.832946 | 7.07E-56 | -1.69E-46 |
| MS.gene055849 | MS.gene057148 | 0.808123 | 3.61E-50 | -1.69E-46 |
| MS.gene057148 | MS.gene057174 | -0.819546 | 1.10E-52 | -1.69E-46 |
| MS.gene057148 | MS.gene059026 | 0.844215 | 8.68E-59 | -1.69E-46 |
| MS.gene057148 | MS.gene05985 | 0.810973 | 8.83E-51 | -1.69E-46 |
| MS.gene057148 | MS.gene060337 | -0.803675 | 3.11E-49 | -1.69E-46 |
| MS.gene057148 | MS.gene060522 | -0.828875 | 7.05E-55 | -1.69E-46 |
| MS.gene057148 | MS.gene061729 | -0.815515 | 8.89E-52 | -1.69E-46 |
| MS.gene057148 | MS.gene061782 | -0.80068 | 1.29E-48 | -1.69E-46 |
| MS.gene057148 | MS.gene06194 | 0.804244 | 2.37E-49 | -1.69E-46 |
| MS.gene057148 | MS.gene062288 | -0.844438 | 7.56E-59 | -1.69E-46 |
| MS.gene057148 | MS.gene06298 | -0.838311 | 3.10E-57 | -1.69E-46 |
| MS.gene057148 | MS.gene06299 | -0.858016 | 1.10E-62 | -1.69E-46 |
| MS.gene057148 | MS.gene063139 | 0.804823 | 1.80E-49 | -1.69E-46 |
| MS.gene057148 | MS.gene063386 | -0.812504 | 4.10E-51 | -1.69E-46 |
| MS.gene057148 | MS.gene06439 | -0.818273 | 2.14E-52 | -1.69E-46 |
| MS.gene057148 | MS.gene064425 | -0.814917 | 1.21E-51 | -1.69E-46 |
| MS.gene057148 | MS.gene064665 | 0.844601 | 6.84E-59 | -1.69E-46 |
| MS.gene057148 | MS.gene065073 | -0.815752 | 7.87E-52 | -1.69E-46 |
| MS.gene057148 | MS.gene065400 | 0.800222 | 1.59E-48 | -1.69E-46 |
| MS.gene057148 | MS.gene065509 | -0.862397 | 5.22E-64 | -1.69E-46 |
| MS.gene057148 | MS.gene065510 | -0.83569 | 1.45E-56 | -1.69E-46 |
| MS.gene057148 | MS.gene06608 | 0.811798 | 5.85E-51 | -1.69E-46 |
| MS.gene057148 | MS.gene066330 | -0.824249 | 8.94E-54 | -1.69E-46 |
| MS.gene057148 | MS.gene067531 | -0.833786 | 4.37E-56 | -1.69E-46 |
| MS.gene057148 | MS.gene067785 | -0.885141 | 1.05E-71 | -1.69E-46 |
| MS.gene057148 | MS.gene069575 | 0.811403 | 7.13E-51 | -1.69E-46 |
| MS.gene057148 | MS.gene070025 | -0.825737 | 3.98E-54 | -1.69E-46 |
| MS.gene057148 | MS.gene071900 | 0.807498 | 4.91E-50 | -1.69E-46 |
| MS.gene057148 | MS.gene071901 | 0.851997 | 6.16E-61 | -1.69E-46 |
| MS.gene057148 | MS.gene071947 | -0.805396 | 1.36E-49 | -1.69E-46 |
| MS.gene057148 | MS.gene071949 | -0.801026 | 1.09E-48 | -1.69E-46 |
| MS.gene057148 | MS.gene07212 | -0.825943 | 3.56E-54 | -1.69E-46 |
| MS.gene057148 | MS.gene072804 | -0.806035 | 1.00E-49 | -1.69E-46 |
| MS.gene057148 | MS.gene073500 | -0.800074 | 1.71E-48 | -1.69E-46 |
| MS.gene057148 | MS.gene073556 | -0.812774 | 3.58E-51 | -1.69E-46 |
| MS.gene057148 | MS.gene073608 | 0.80722 | 5.62E-50 | -1.69E-46 |
| MS.gene057148 | MS.gene07361 | -0.878179 | 3.46E-69 | -1.69E-46 |
| MS.gene057148 | MS.gene07362 | -0.87728 | 7.13E-69 | -1.69E-46 |
| MS.gene057148 | MS.gene07426 | -0.808814 | 2.57E-50 | -1.69E-46 |
| MS.gene057148 | MS.gene07789 | -0.800073 | 1.71E-48 | -1.69E-46 |
| MS.gene057148 | MS.gene08866 | -0.807201 | 5.67E-50 | -1.69E-46 |
| MS.gene057148 | MS.gene20730 | -0.801744 | 7.79E-49 | -1.69E-46 |
| MS.gene057148 | MS.gene20905 | -0.85623 | 3.70E-62 | -1.69E-46 |
| MS.gene057148 | MS.gene20919 | 0.865161 | 7.22E-65 | -1.69E-46 |
| MS.gene057148 | MS.gene21128 | 0.849947 | 2.33E-60 | -1.69E-46 |
| MS.gene057148 | MS.gene21237 | -0.875357 | 3.29E-68 | -1.69E-46 |
| MS.gene057148 | MS.gene22342 | -0.809586 | 1.76E-50 | -1.69E-46 |
| MS.gene057148 | MS.gene22377 | 0.910886 | 1.13E-82 | -1.69E-46 |
| MS.gene057148 | MS.gene22670 | 0.823661 | 1.23E-53 | -1.69E-46 |
| MS.gene057148 | MS.gene24408 | -0.86681 | 2.17E-65 | -1.69E-46 |
| MS.gene057148 | MS.gene24726 | 0.804866 | 1.76E-49 | -1.69E-46 |
| MS.gene057148 | MS.gene29374 | 0.823903 | 1.08E-53 | -1.69E-46 |
| MS.gene057148 | MS.gene31072 | -0.819519 | 1.11E-52 | -1.69E-46 |
| MS.gene057148 | MS.gene31510 | 0.829249 | 5.72E-55 | -1.69E-46 |
| MS.gene057148 | MS.gene32251 | 0.805263 | 1.45E-49 | -1.69E-46 |
| MS.gene057148 | MS.gene33159 | -0.804449 | 2.15E-49 | -1.69E-46 |
| MS.gene057148 | MS.gene33472 | 0.816408 | 5.62E-52 | -1.69E-46 |
| MS.gene057148 | MS.gene33909 | -0.805094 | 1.58E-49 | -1.69E-46 |
| MS.gene057148 | MS.gene36464 | -0.804411 | 2.19E-49 | -1.69E-46 |
| MS.gene057148 | MS.gene36749 | -0.81671 | 4.81E-52 | -1.69E-46 |
| MS.gene057148 | MS.gene38046 | 0.815032 | 1.14E-51 | -1.69E-46 |
| MS.gene057148 | MS.gene38110 | 0.844305 | 8.21E-59 | -1.69E-46 |
| MS.gene057148 | MS.gene38719 | 0.815259 | 1.01E-51 | -1.69E-46 |
| MS.gene057148 | MS.gene38722 | -0.81758 | 3.06E-52 | -1.69E-46 |
| MS.gene057148 | MS.gene39053 | -0.845224 | 4.64E-59 | -1.69E-46 |
| MS.gene057148 | MS.gene39699 | -0.800868 | 1.18E-48 | -1.69E-46 |
| MS.gene057148 | MS.gene39743 | -0.804586 | 2.01E-49 | -1.69E-46 |
| MS.gene057148 | MS.gene40252 | 0.841528 | 4.50E-58 | -1.69E-46 |
| MS.gene057148 | MS.gene41626 | -0.891444 | 3.95E-74 | -1.69E-46 |
| MS.gene057148 | MS.gene41627 | -0.84064 | 7.70E-58 | -1.69E-46 |
| MS.gene057148 | MS.gene41704 | -0.881 | 3.45E-70 | -1.69E-46 |
| MS.gene057148 | MS.gene42218 | -0.82407 | 9.85E-54 | -1.69E-46 |
| MS.gene057148 | MS.gene42342 | 0.84466 | 6.59E-59 | -1.69E-46 |
| MS.gene057148 | MS.gene44855 | 0.807578 | 4.72E-50 | -1.69E-46 |
| MS.gene057148 | MS.gene45789 | -0.810754 | 9.85E-51 | -1.69E-46 |
| MS.gene057148 | MS.gene46055 | -0.822029 | 2.95E-53 | -1.69E-46 |
| MS.gene057148 | MS.gene47049 | -0.817082 | 3.97E-52 | -1.69E-46 |
| MS.gene057148 | MS.gene47378 | 0.827579 | 1.45E-54 | -1.69E-46 |
| MS.gene057148 | MS.gene47809 | 0.850262 | 1.90E-60 | -1.69E-46 |
| MS.gene057148 | MS.gene48276 | 0.96931 | 6.19E-130 | -1.69E-46 |
| MS.gene057148 | MS.gene48756 | -0.812139 | 4.93E-51 | -1.69E-46 |
| MS.gene057148 | MS.gene48838 | -0.816245 | 6.11E-52 | -1.69E-46 |
| MS.gene057148 | MS.gene49262 | -0.820643 | 6.15E-53 | -1.69E-46 |
| MS.gene057148 | MS.gene50368 | -0.810419 | 1.16E-50 | -1.69E-46 |
| MS.gene057148 | MS.gene50520 | -0.816604 | 5.08E-52 | -1.69E-46 |
| MS.gene057148 | MS.gene51143 | 0.842169 | 3.05E-58 | -1.69E-46 |
| MS.gene057148 | MS.gene51630 | -0.831518 | 1.60E-55 | -1.69E-46 |
| MS.gene057148 | MS.gene51894 | -0.882569 | 9.33E-71 | -1.69E-46 |
| MS.gene057148 | MS.gene51935 | -0.882233 | 1.24E-70 | -1.69E-46 |
| MS.gene057148 | MS.gene52593 | 0.817321 | 3.50E-52 | -1.69E-46 |
| MS.gene057148 | MS.gene55785 | 0.828074 | 1.10E-54 | -1.69E-46 |
| MS.gene057148 | MS.gene56130 | -0.80933 | 2.00E-50 | -1.69E-46 |
| MS.gene057148 | MS.gene56262 | -0.809816 | 1.57E-50 | -1.69E-46 |
| MS.gene057148 | MS.gene56769 | -0.814709 | 1.34E-51 | -1.69E-46 |
| MS.gene057148 | MS.gene57034 | 0.800076 | 1.71E-48 | -1.69E-46 |
| MS.gene057148 | MS.gene58022 | -0.856209 | 3.76E-62 | -1.69E-46 |
| MS.gene057148 | MS.gene58063 | -0.819347 | 1.22E-52 | -1.69E-46 |
| MS.gene057148 | MS.gene58183 | -0.814332 | 1.63E-51 | -1.69E-46 |
| MS.gene057148 | MS.gene59409 | -0.846632 | 1.92E-59 | -1.69E-46 |
| MS.gene057148 | MS.gene60795 | 0.825839 | 3.77E-54 | -1.69E-46 |
| MS.gene057148 | MS.gene61153 | -0.817879 | 2.62E-52 | -1.69E-46 |
| MS.gene057148 | MS.gene61184 | -0.813645 | 2.31E-51 | -1.69E-46 |
| MS.gene057148 | MS.gene61516 | -0.826114 | 3.24E-54 | -1.69E-46 |
| MS.gene057148 | MS.gene62407 | -0.810651 | 1.04E-50 | -1.69E-46 |
| MS.gene057148 | MS.gene63905 | -0.810132 | 1.34E-50 | -1.69E-46 |
| MS.gene057148 | MS.gene64700 | -0.839922 | 1.19E-57 | -1.69E-46 |
| MS.gene057148 | MS.gene65385 | 0.817129 | 3.87E-52 | -1.69E-46 |
| MS.gene057148 | MS.gene67131 | -0.863273 | 2.80E-64 | -1.69E-46 |
| MS.gene057148 | MS.gene68124 | 0.840128 | 1.05E-57 | -1.69E-46 |
| MS.gene057148 | MS.gene68126 | 0.830095 | 3.56E-55 | -1.69E-46 |
| MS.gene057148 | MS.gene68617 | -0.843254 | 1.57E-58 | -1.69E-46 |
| MS.gene057148 | MS.gene68631 | -0.812468 | 4.18E-51 | -1.69E-46 |
| MS.gene057148 | MS.gene68725 | 0.815512 | 8.90E-52 | -1.69E-46 |
| MS.gene057148 | MS.gene69734 | 0.892306 | 1.79E-74 | -1.69E-46 |
| MS.gene057148 | MS.gene70468 | 0.801413 | 9.11E-49 | -1.69E-46 |
| MS.gene057148 | MS.gene71722 | -0.818225 | 2.19E-52 | -1.69E-46 |
| MS.gene057148 | MS.gene71891 | 0.847946 | 8.38E-60 | -1.69E-46 |
| MS.gene057148 | MS.gene72019 | 0.807191 | 5.70E-50 | -1.69E-46 |
| MS.gene057148 | MS.gene72915 | -0.824454 | 8.00E-54 | -1.69E-46 |
| MS.gene057148 | MS.gene73393 | -0.861585 | 9.25E-64 | -1.69E-46 |
| MS.gene057148 | MS.gene73461 | 0.804644 | 1.96E-49 | -1.69E-46 |
| MS.gene057148 | MS.gene73478 | -0.807933 | 3.97E-50 | -1.69E-46 |
| MS.gene057148 | MS.gene73644 | -0.860369 | 2.17E-63 | -1.69E-46 |
| MS.gene057148 | MS.gene73783 | 0.908172 | 2.29E-81 | -1.69E-46 |
| MS.gene057148 | MS.gene74819 | -0.815675 | 8.19E-52 | -1.69E-46 |
| MS.gene057148 | MS.gene74990 | -0.819109 | 1.38E-52 | -1.69E-46 |
| MS.gene057148 | MS.gene75344 | -0.828879 | 7.03E-55 | -1.69E-46 |
| MS.gene057148 | MS.gene75415 | 0.913786 | 4.11E-84 | -1.69E-46 |
| MS.gene057148 | MS.gene75417 | 0.914074 | 2.94E-84 | -1.69E-46 |
| MS.gene057148 | MS.gene76249 | -0.828715 | 7.71E-55 | -1.69E-46 |
| MS.gene057148 | MS.gene76503 | 0.849204 | 3.76E-60 | -1.69E-46 |
| MS.gene057148 | MS.gene76702 | -0.804221 | 2.40E-49 | -1.69E-46 |
| MS.gene057148 | MS.gene77666 | -0.850804 | 1.34E-60 | -1.69E-46 |
| MS.gene057148 | MS.gene77826 | 0.842194 | 3.00E-58 | -1.69E-46 |
| MS.gene057148 | MS.gene78366 | -0.846421 | 2.20E-59 | -1.69E-46 |
| MS.gene057148 | MS.gene78487 | 0.826243 | 3.02E-54 | -1.69E-46 |
| MS.gene057148 | MS.gene80167 | -0.82081 | 5.63E-53 | -1.69E-46 |
| MS.gene057148 | MS.gene80966 | 0.805268 | 1.45E-49 | -1.69E-46 |
| MS.gene057148 | MS.gene81230 | 0.813284 | 2.77E-51 | -1.69E-46 |
| MS.gene057148 | MS.gene81359 | -0.832537 | 8.93E-56 | -1.69E-46 |
| MS.gene057148 | MS.gene84413 | 0.810347 | 1.21E-50 | -1.69E-46 |
| MS.gene057148 | MS.gene84703 | -0.810492 | 1.12E-50 | -1.69E-46 |
| MS.gene057148 | MS.gene84733 | -0.82292 | 1.83E-53 | -1.69E-46 |
| MS.gene057148 | MS.gene84734 | -0.82142 | 4.08E-53 | -1.69E-46 |
| MS.gene057148 | MS.gene84866 | -0.817609 | 3.02E-52 | -1.69E-46 |
| MS.gene057148 | MS.gene85119 | 0.849468 | 3.17E-60 | -1.69E-46 |
| MS.gene057148 | MS.gene88853 | -0.806338 | 8.63E-50 | -1.69E-46 |
| MS.gene057148 | MS.gene89091 | 0.812673 | 3.77E-51 | -1.69E-46 |
| MS.gene057148 | MS.gene89256 | -0.824508 | 7.77E-54 | -1.69E-46 |
| MS.gene057148 | MS.gene89322 | -0.807498 | 4.91E-50 | -1.69E-46 |
| MS.gene057148 | MS.gene90786 | 0.846865 | 1.66E-59 | -1.69E-46 |
| MS.gene057148 | MS.gene92076 | -0.819946 | 8.89E-53 | -1.69E-46 |
| MS.gene057148 | MS.gene93967 | 0.844649 | 6.64E-59 | -1.69E-46 |
| MS.gene057148 | MS.gene94266 | -0.83361 | 4.83E-56 | -1.69E-46 |
| MS.gene057148 | MS.gene95638 | 0.809143 | 2.19E-50 | -1.69E-46 |
| MS.gene057148 | MS.gene97731 | 0.83074 | 2.48E-55 | -1.69E-46 |
| MS.gene057148 | MS.gene98636 | -0.855776 | 5.03E-62 | -1.69E-46 |
| MS.gene057148 | MS.gene99191 | -0.821976 | 3.03E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057148.t1 | MTR_4g104030 | 96.087 | 230 | 7 | 1 | 1 | 228 | 1 | 230 | 8.82e-166 | 456 |
| MS.gene057148.t1 | MTR_8g007235 | 64.865 | 148 | 51 | 1 | 81 | 228 | 3 | 149 | 1.60e-67 | 204 |
| MS.gene057148.t1 | MTR_8g099450 | 56.757 | 148 | 64 | 0 | 79 | 226 | 83 | 230 | 8.06e-61 | 191 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057148.t1 | AT5G63310 | 70.048 | 207 | 60 | 1 | 22 | 228 | 27 | 231 | 1.40e-102 | 296 |
| MS.gene057148.t1 | AT4G09320 | 62.416 | 149 | 55 | 1 | 80 | 228 | 1 | 148 | 9.83e-68 | 205 |
| MS.gene057148.t1 | AT4G11010 | 50.265 | 189 | 87 | 2 | 45 | 226 | 46 | 234 | 6.28e-63 | 196 |
| MS.gene057148.t1 | AT4G23900 | 56.081 | 148 | 65 | 0 | 79 | 226 | 86 | 233 | 7.29e-60 | 188 |
| MS.gene057148.t1 | AT4G23895 | 56.081 | 148 | 65 | 0 | 79 | 226 | 316 | 463 | 4.22e-57 | 188 |
| MS.gene057148.t1 | AT1G17410 | 38.519 | 135 | 80 | 1 | 81 | 212 | 33 | 167 | 1.25e-24 | 96.3 |
| MS.gene057148.t1 | AT1G17410 | 39.231 | 130 | 76 | 1 | 86 | 212 | 1 | 130 | 2.44e-24 | 94.7 |
| MS.gene057148.t1 | AT1G17410 | 37.190 | 121 | 62 | 3 | 86 | 193 | 1 | 120 | 8.61e-15 | 68.9 |
Find 59 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCGGGCCCCGTTGTGTCTA+TGG | 0.249639 | 8.1:-20481663 | MS.gene057148:intron |
| CCATCAGCACGTAAGCTTAT+AGG | 0.269590 | 8.1:-20481530 | MS.gene057148:CDS |
| GGAAGAAAGACTTCTGATTT+AGG | 0.280449 | 8.1:+20481708 | None:intergenic |
| TTCCATTTGCTGCAGCTCTA+TGG | 0.293061 | 8.1:-20480272 | MS.gene057148:intron |
| GAAAATGGCGAGCGTGAAAT+AGG | 0.318990 | 8.1:-20481280 | MS.gene057148:intron |
| AGTTGACCAGACTTATATTA+TGG | 0.331268 | 8.1:-20483235 | MS.gene057148:CDS |
| GGCAGTGACAGCCCTGAAAA+TGG | 0.334968 | 8.1:-20481295 | MS.gene057148:CDS |
| AGGTGGGTGAAATTATTTCT+AGG | 0.357399 | 8.1:-20483071 | MS.gene057148:CDS |
| GGAGACTTTGCTGTTGAAAC+AGG | 0.369768 | 8.1:-20481467 | MS.gene057148:CDS |
| CTGATTGACTATATTACTTC+GGG | 0.369900 | 8.1:-20481680 | MS.gene057148:CDS |
| GTAATATAGTCAATCAGCTT+AGG | 0.409337 | 8.1:+20481686 | None:intergenic |
| TTTGGCAGGAATATTATTCA+TGG | 0.411414 | 8.1:-20481316 | MS.gene057148:intron |
| GGTGCGTAATTGAGAGCTTC+TGG | 0.413245 | 8.1:+20483481 | None:intergenic |
| TATTTCTAGGTTTGAGAAGA+AGG | 0.414911 | 8.1:-20483058 | MS.gene057148:CDS |
| TGCTGCAGCTCTATGGTTCA+AGG | 0.433624 | 8.1:-20480265 | MS.gene057148:intron |
| GCAGAACCAGGCACAATAAG+AGG | 0.440871 | 8.1:-20481488 | MS.gene057148:CDS |
| GTTTATTATTCTCTTAGCCA+TGG | 0.442524 | 8.1:+20480207 | None:intergenic |
| AAGTCTCCTCTTATTGTGCC+TGG | 0.451702 | 8.1:+20481482 | None:intergenic |
| GGGAAGGAAAATGCCGGTAT+TGG | 0.457249 | 8.1:+20483364 | None:intergenic |
| TGCAAGGCTTGGGAGGGTGT+TGG | 0.459104 | 8.1:-20481560 | MS.gene057148:intron |
| AAGGAAAATGCCGGTATTGG+TGG | 0.464284 | 8.1:+20483367 | None:intergenic |
| AGTTATACCATAGACACAAC+GGG | 0.464995 | 8.1:+20481656 | None:intergenic |
| GCTGATTGACTATATTACTT+CGG | 0.470279 | 8.1:-20481681 | MS.gene057148:CDS |
| AAGACCACGTTGCACGCCAT+CGG | 0.478860 | 8.1:+20483206 | None:intergenic |
| GTTTCACCATAATATAAGTC+TGG | 0.480267 | 8.1:+20483229 | None:intergenic |
| TAATATAGTCAATCAGCTTA+GGG | 0.480624 | 8.1:+20481687 | None:intergenic |
| AGACCACGTTGCACGCCATC+GGG | 0.491598 | 8.1:+20483207 | None:intergenic |
| TTATGTTTGCAAGGCTTGGG+AGG | 0.497838 | 8.1:-20481567 | MS.gene057148:intron |
| ACTAAAAGCTCCACCAATAC+CGG | 0.504894 | 8.1:-20483377 | MS.gene057148:CDS |
| ATTTCTAGGTTTGAGAAGAA+GGG | 0.506715 | 8.1:-20483057 | MS.gene057148:CDS |
| AAGAAGAGAAATGGAAGCCA+TGG | 0.508654 | 8.1:-20483564 | None:intergenic |
| ATTCTCTTAGCCATGGATGT+AGG | 0.509659 | 8.1:+20480214 | None:intergenic |
| CTTAGCCATGGATGTAGGAC+AGG | 0.510478 | 8.1:+20480219 | None:intergenic |
| ATGGTTTCAGGAGCATTACA+AGG | 0.519469 | 8.1:-20481732 | MS.gene057148:intron |
| CCTATAAGCTTACGTGCTGA+TGG | 0.530791 | 8.1:+20481530 | None:intergenic |
| TATGTTTGCAAGGCTTGGGA+GGG | 0.532452 | 8.1:-20481566 | MS.gene057148:intron |
| AAGGAAATGCAGAAAGGTGT+TGG | 0.533599 | 8.1:+20483456 | None:intergenic |
| GTTTGTGTTGCGTAGGAGAG+AGG | 0.541606 | 8.1:+20483505 | None:intergenic |
| AGGAAGGCGAATTATGTGAA+TGG | 0.560837 | 8.1:-20480245 | MS.gene057148:CDS |
| TACGAGAGAAGCAATTAAGT+GGG | 0.561109 | 8.1:+20483343 | None:intergenic |
| TTCTGGTGTTTGTGTTGCGT+AGG | 0.563899 | 8.1:+20483498 | None:intergenic |
| GTGCCTGGTTCTGCTTGCAG+AGG | 0.569047 | 8.1:+20481497 | None:intergenic |
| ATACGAGAGAAGCAATTAAG+TGG | 0.569438 | 8.1:+20483342 | None:intergenic |
| AGGAAATGCAGAAAGGTGTT+GGG | 0.575380 | 8.1:+20483457 | None:intergenic |
| AATCCTCTGCAAGCAGAACC+AGG | 0.581765 | 8.1:-20481500 | MS.gene057148:CDS |
| GGACTCCTGTCCTACATCCA+TGG | 0.592922 | 8.1:-20480224 | MS.gene057148:CDS |
| GAGAAGCAATTAAGTGGGGA+AGG | 0.599469 | 8.1:+20483348 | None:intergenic |
| TATATTATGGTGAAACCCGA+TGG | 0.602776 | 8.1:-20483222 | MS.gene057148:CDS |
| GCTTCCGCAAAACACGCCCA+TGG | 0.604183 | 8.1:+20483547 | None:intergenic |
| ATGCTCTAAAGAATTAGCTG+AGG | 0.624258 | 8.1:-20483004 | MS.gene057148:intron |
| ACTTTGCTGTTGAAACAGGA+AGG | 0.628376 | 8.1:-20481463 | MS.gene057148:intron |
| AGAAGAGAAATGGAAGCCAT+GGG | 0.637883 | 8.1:-20483563 | None:intergenic |
| GCAGCTCTATGGTTCAAGGA+AGG | 0.644056 | 8.1:-20480261 | MS.gene057148:intron |
| GAGTTATACCATAGACACAA+CGG | 0.655073 | 8.1:+20481655 | None:intergenic |
| AAACCCGATGGCGTGCAACG+TGG | 0.663446 | 8.1:-20483210 | MS.gene057148:CDS |
| TAAGTGGGGAAGGAAAATGC+CGG | 0.688484 | 8.1:+20483358 | None:intergenic |
| ACGAGAGAAGCAATTAAGTG+GGG | 0.691293 | 8.1:+20483344 | None:intergenic |
| AAATGCAGAAAGGTGTTGGG+TGG | 0.739959 | 8.1:+20483460 | None:intergenic |
| GTTATACCATAGACACAACG+GGG | 0.788135 | 8.1:+20481657 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATGCTAAAATAGAAAA+AGG | + | chr8.1:20482849-20482868 | None:intergenic | 15.0% |
| !! | TTCAATATATTACATTGATA+TGG | - | chr8.1:20480899-20480918 | MS.gene057148:intron | 15.0% |
| !! | AACTAAATATCGACAAAATA+AGG | + | chr8.1:20483381-20483400 | None:intergenic | 20.0% |
| !! | AAGAAAAATATAAGTTGCAA+AGG | - | chr8.1:20483300-20483319 | MS.gene057148:intron | 20.0% |
| !! | AGAAAAATATAAGTTGCAAA+GGG | - | chr8.1:20483301-20483320 | MS.gene057148:intron | 20.0% |
| !! | CCTGCTAATATATAAATTAA+CGG | + | chr8.1:20482600-20482619 | None:intergenic | 20.0% |
| !! | GAAACAAAAATTGAAGTTTA+AGG | - | chr8.1:20480643-20480662 | MS.gene057148:intron | 20.0% |
| !! | TGACTTATTGTGATTATTTA+TGG | - | chr8.1:20482015-20482034 | MS.gene057148:intron | 20.0% |
| !! | TGCATAGATTGAATTTATTT+AGG | + | chr8.1:20481324-20481343 | None:intergenic | 20.0% |
| !! | TTGAATTATGTATTGAATAC+AGG | - | chr8.1:20483105-20483124 | MS.gene057148:intron | 20.0% |
| !!! | ATGTTTTTTTTTTAATGTGC+AGG | - | chr8.1:20480504-20480523 | MS.gene057148:intron | 20.0% |
| !!! | ATTATTATGAAAAGCACAAT+TGG | + | chr8.1:20480960-20480979 | None:intergenic | 20.0% |
| !!! | TAATTGTTGTTTTGTTGAAT+TGG | - | chr8.1:20480669-20480688 | MS.gene057148:intron | 20.0% |
| !!! | TGCTTTTATTCATTTAATGA+GGG | + | chr8.1:20481667-20481686 | None:intergenic | 20.0% |
| !!! | TTATTATGAAAAGCACAATT+GGG | + | chr8.1:20480959-20480978 | None:intergenic | 20.0% |
| !!! | TTTTGTCGATATTTAGTTAT+AGG | - | chr8.1:20483383-20483402 | MS.gene057148:CDS | 20.0% |
| ! | AAAAATATAAGTTGCAAAGG+GGG | - | chr8.1:20483303-20483322 | MS.gene057148:intron | 25.0% |
| ! | AAGTAGAAGATGAAAAAAGA+TGG | + | chr8.1:20480343-20480362 | None:intergenic | 25.0% |
| ! | AGAATCAAGATAAGATTCAT+AGG | - | chr8.1:20482372-20482391 | MS.gene057148:intron | 25.0% |
| ! | AGTAAGAAACCATGAAAATA+TGG | + | chr8.1:20481888-20481907 | None:intergenic | 25.0% |
| ! | AGTAGAAGATGAAAAAAGAT+GGG | + | chr8.1:20480342-20480361 | None:intergenic | 25.0% |
| ! | CATGAAAATATGGATACAAT+TGG | + | chr8.1:20481878-20481897 | None:intergenic | 25.0% |
| ! | CCAATTTAATAGATTACTAC+AGG | + | chr8.1:20481602-20481621 | None:intergenic | 25.0% |
| ! | CCGTTAATTTATATATTAGC+AGG | - | chr8.1:20482597-20482616 | MS.gene057148:intron | 25.0% |
| ! | CCTGTAGTAATCTATTAAAT+TGG | - | chr8.1:20481599-20481618 | MS.gene057148:intron | 25.0% |
| ! | GAAAAATATAAGTTGCAAAG+GGG | - | chr8.1:20483302-20483321 | MS.gene057148:intron | 25.0% |
| ! | GAATCAAGATAAGATTCATA+GGG | - | chr8.1:20482373-20482392 | MS.gene057148:intron | 25.0% |
| ! | TAAGTCTACTCTATATCATA+TGG | + | chr8.1:20481914-20481933 | None:intergenic | 25.0% |
| ! | TAATATAGTCAATCAGCTTA+GGG | + | chr8.1:20482082-20482101 | None:intergenic | 25.0% |
| ! | TTAAAGAATCACAGTATTAC+AGG | + | chr8.1:20483461-20483480 | None:intergenic | 25.0% |
| ! | TTATAAACTTATGCTGAAGA+GGG | + | chr8.1:20482930-20482949 | None:intergenic | 25.0% |
| ! | TTCATTTAATGAGGGTTAAT+AGG | + | chr8.1:20481659-20481678 | None:intergenic | 25.0% |
| ! | TTCTTGTACTATCAAGTTTA+TGG | + | chr8.1:20481506-20481525 | None:intergenic | 25.0% |
| ! | TTGTGATTATTTATGGTTTC+AGG | - | chr8.1:20482022-20482041 | MS.gene057148:intron | 25.0% |
| ! | TTTATAAACTTATGCTGAAG+AGG | + | chr8.1:20482931-20482950 | None:intergenic | 25.0% |
| !! | ATACAATTGGATTTTGTAAC+TGG | + | chr8.1:20481865-20481884 | None:intergenic | 25.0% |
| !! | CAATTGTATCCATATTTTCA+TGG | - | chr8.1:20481876-20481895 | MS.gene057148:intron | 25.0% |
| !! | GTGCTTTTATTCATTTAATG+AGG | + | chr8.1:20481668-20481687 | None:intergenic | 25.0% |
| !!! | AAGAAGGGTTTTAAGTTAAT+TGG | - | chr8.1:20480724-20480743 | MS.gene057148:intron | 25.0% |
| !!! | AAGATCTTTTAAGATACTTC+CGG | - | chr8.1:20481072-20481091 | MS.gene057148:intron | 25.0% |
| !!! | GTTAATTTGCTATTTACACA+TGG | - | chr8.1:20481991-20482010 | MS.gene057148:intron | 25.0% |
| !!! | TTGTTTTGTTGAATTGGTTT+AGG | - | chr8.1:20480675-20480694 | MS.gene057148:intron | 25.0% |
| AAACCTCTTGTGTAAAAAAC+AGG | - | chr8.1:20482757-20482776 | MS.gene057148:intron | 30.0% | |
| AACCTCTTGTGTAAAAAACA+GGG | - | chr8.1:20482758-20482777 | MS.gene057148:intron | 30.0% | |
| AACTATACTCAATCCTTTCA+TGG | + | chr8.1:20481794-20481813 | None:intergenic | 30.0% | |
| AATAACAAGCTATACCTTAG+AGG | + | chr8.1:20481134-20481153 | None:intergenic | 30.0% | |
| ACACAAACGAGTTAAATTTC+AGG | + | chr8.1:20483033-20483052 | None:intergenic | 30.0% | |
| AGAGTCAACAATCTTATTGA+TGG | + | chr8.1:20480988-20481007 | None:intergenic | 30.0% | |
| AGTTGACCAGACTTATATTA+TGG | - | chr8.1:20480531-20480550 | MS.gene057148:intron | 30.0% | |
| ATAACAAGCTATACCTTAGA+GGG | + | chr8.1:20481133-20481152 | None:intergenic | 30.0% | |
| ATGAACTTCACAATATGTCA+TGG | + | chr8.1:20481718-20481737 | None:intergenic | 30.0% | |
| CACTTCAATTTCATATGTTC+TGG | - | chr8.1:20480602-20480621 | MS.gene057148:intron | 30.0% | |
| CATATTGTGAAGTTCATTCA+AGG | - | chr8.1:20481721-20481740 | MS.gene057148:CDS | 30.0% | |
| CTAAGATAGGTATAGGTATA+CGG | - | chr8.1:20481373-20481392 | MS.gene057148:intron | 30.0% | |
| CTGATTGACTATATTACTTC+GGG | - | chr8.1:20482086-20482105 | MS.gene057148:intron | 30.0% | |
| CTTATCTTGATTCTTGACTA+AGG | + | chr8.1:20482366-20482385 | None:intergenic | 30.0% | |
| CTTGACAAAATTACAAACTC+TGG | + | chr8.1:20482968-20482987 | None:intergenic | 30.0% | |
| GCTGATTGACTATATTACTT+CGG | - | chr8.1:20482085-20482104 | MS.gene057148:intron | 30.0% | |
| GTAATATAGTCAATCAGCTT+AGG | + | chr8.1:20482083-20482102 | None:intergenic | 30.0% | |
| GTTTCACCATAATATAAGTC+TGG | + | chr8.1:20480540-20480559 | None:intergenic | 30.0% | |
| TAAGATAGGTATAGGTATAC+GGG | - | chr8.1:20481374-20481393 | MS.gene057148:intron | 30.0% | |
| TAGAATTCCCAAAAAAGTTG+TGG | - | chr8.1:20482898-20482917 | MS.gene057148:intron | 30.0% | |
| TATTGAATACAGGCAAAACT+TGG | - | chr8.1:20483115-20483134 | MS.gene057148:intron | 30.0% | |
| TCTGAATATGTTTCCATGAA+AGG | - | chr8.1:20481778-20481797 | MS.gene057148:intron | 30.0% | |
| TTTGGCAGGAATATTATTCA+TGG | - | chr8.1:20482450-20482469 | MS.gene057148:intron | 30.0% | |
| ! | AAGATCTTGTGATGAACTTT+TGG | - | chr8.1:20482432-20482451 | MS.gene057148:intron | 30.0% |
| ! | AATTGGATTTTGTAACTGGA+TGG | + | chr8.1:20481861-20481880 | None:intergenic | 30.0% |
| ! | ATCCTTTTCGTTGCATTTAT+TGG | + | chr8.1:20482546-20482565 | None:intergenic | 30.0% |
| ! | ATTTCTAGGTTTGAGAAGAA+GGG | - | chr8.1:20480709-20480728 | MS.gene057148:intron | 30.0% |
| ! | GAAAAAAGATGGGATTTTGA+AGG | + | chr8.1:20480332-20480351 | None:intergenic | 30.0% |
| ! | TCCTTTTCGTTGCATTTATT+GGG | + | chr8.1:20482545-20482564 | None:intergenic | 30.0% |
| ! | TTTGTTGAATTGGTTTAGGT+GGG | - | chr8.1:20480679-20480698 | MS.gene057148:intron | 30.0% |
| !! | ATTTTGAAGGAAATGCAGAA+AGG | + | chr8.1:20480319-20480338 | None:intergenic | 30.0% |
| !! | TATTTCTAGGTTTGAGAAGA+AGG | - | chr8.1:20480708-20480727 | MS.gene057148:intron | 30.0% |
| !! | TTTTGTTGAATTGGTTTAGG+TGG | - | chr8.1:20480678-20480697 | MS.gene057148:intron | 30.0% |
| !!! | CTAATTATGGGTTTTAGGTA+GGG | - | chr8.1:20481552-20481571 | MS.gene057148:CDS | 30.0% |
| !!! | GTCTATTCCACAACTTTTTT+GGG | + | chr8.1:20482908-20482927 | None:intergenic | 30.0% |
| !!! | TTTCTGGTTTTATGTTTGCA+AGG | - | chr8.1:20482190-20482209 | MS.gene057148:intron | 30.0% |
| ACAAGAAAGTCTCTTCAAGA+TGG | - | chr8.1:20481519-20481538 | MS.gene057148:CDS | 35.0% | |
| ACCCAATAAATGCAACGAAA+AGG | - | chr8.1:20482541-20482560 | MS.gene057148:intron | 35.0% | |
| AGAGATCAAACATGAATGTC+AGG | - | chr8.1:20481472-20481491 | MS.gene057148:CDS | 35.0% | |
| AGTTATACCATAGACACAAC+GGG | + | chr8.1:20482113-20482132 | None:intergenic | 35.0% | |
| AGTTTGTAAAGGAGAATGAC+AGG | - | chr8.1:20480875-20480894 | MS.gene057148:intron | 35.0% | |
| ATACGAGAGAAGCAATTAAG+TGG | + | chr8.1:20480427-20480446 | None:intergenic | 35.0% | |
| ATTTGTCCTAGAAACAACCT+TGG | - | chr8.1:20482677-20482696 | MS.gene057148:intron | 35.0% | |
| CAACGAGATTGATCATTGAA+TGG | - | chr8.1:20483339-20483358 | MS.gene057148:intron | 35.0% | |
| CAATCTATGCAACAACAAGA+TGG | - | chr8.1:20481333-20481352 | MS.gene057148:intron | 35.0% | |
| CAATCTCGTTGTATCTAAGA+TGG | + | chr8.1:20483330-20483349 | None:intergenic | 35.0% | |
| CAATTGGAGAGGAACTAAAT+GGG | - | chr8.1:20481263-20481282 | MS.gene057148:intron | 35.0% | |
| CCTACCTAAAACCCATAATT+AGG | + | chr8.1:20481554-20481573 | None:intergenic | 35.0% | |
| CTGAATCATGACACTATAAG+AGG | + | chr8.1:20482517-20482536 | None:intergenic | 35.0% | |
| CTTGTGTAAAAAACAGGGTA+AGG | - | chr8.1:20482763-20482782 | MS.gene057148:intron | 35.0% | |
| GAGATCAAACATGAATGTCA+GGG | - | chr8.1:20481473-20481492 | MS.gene057148:CDS | 35.0% | |
| GAGTGTTAACAATACCACTA+TGG | + | chr8.1:20481109-20481128 | None:intergenic | 35.0% | |
| GAGTTATACCATAGACACAA+CGG | + | chr8.1:20482114-20482133 | None:intergenic | 35.0% | |
| GCACAAGTTGTATAAACTGT+TGG | - | chr8.1:20483168-20483187 | MS.gene057148:intron | 35.0% | |
| GGAAGAAAGACTTCTGATTT+AGG | + | chr8.1:20482061-20482080 | None:intergenic | 35.0% | |
| GTTATTGTCATGTGACTGAA+AGG | - | chr8.1:20482712-20482731 | MS.gene057148:intron | 35.0% | |
| GTTTGTAAAGGAGAATGACA+GGG | - | chr8.1:20480876-20480895 | MS.gene057148:intron | 35.0% | |
| TAAAACCCATAATTAGGCCA+TGG | + | chr8.1:20481548-20481567 | None:intergenic | 35.0% | |
| TACCTGTTGAATGTACTTTC+TGG | - | chr8.1:20482174-20482193 | MS.gene057148:intron | 35.0% | |
| TACGAGAGAAGCAATTAAGT+GGG | + | chr8.1:20480426-20480445 | None:intergenic | 35.0% | |
| TAGTATCCCATTCTCAATGA+GGG | - | chr8.1:20482141-20482160 | MS.gene057148:intron | 35.0% | |
| TATATTATGGTGAAACCCGA+TGG | - | chr8.1:20480544-20480563 | MS.gene057148:intron | 35.0% | |
| TCAATTGGAGAGGAACTAAA+TGG | - | chr8.1:20481262-20481281 | MS.gene057148:intron | 35.0% | |
| TGCAGCAAATGGAAATAACT+GGG | + | chr8.1:20483488-20483507 | None:intergenic | 35.0% | |
| ! | AACCAGAAAGTACATTCAAC+AGG | + | chr8.1:20482179-20482198 | None:intergenic | 35.0% |
| ! | AGGTGGGTGAAATTATTTCT+AGG | - | chr8.1:20480695-20480714 | MS.gene057148:intron | 35.0% |
| ! | ATGGCCTAATTATGGGTTTT+AGG | - | chr8.1:20481547-20481566 | MS.gene057148:CDS | 35.0% |
| ! | ATTCATAGGGTGTGTTTTTC+TGG | - | chr8.1:20482386-20482405 | MS.gene057148:intron | 35.0% |
| ! | GTCTTGTCTTTTATGCAGAT+TGG | + | chr8.1:20481302-20481321 | None:intergenic | 35.0% |
| ! | GTTTTATGTTTGCAAGGCTT+GGG | - | chr8.1:20482196-20482215 | MS.gene057148:intron | 35.0% |
| ! | TTGGCATGCATAAGCATTTT+AGG | - | chr8.1:20483134-20483153 | MS.gene057148:intron | 35.0% |
| !! | ATGCTCTAAAGAATTAGCTG+AGG | - | chr8.1:20480762-20480781 | MS.gene057148:intron | 35.0% |
| !! | TAAGATTGTTGACTCTTAGC+AGG | - | chr8.1:20480992-20481011 | MS.gene057148:intron | 35.0% |
| !! | TTTCTTGTTGTTACGACACA+GGG | - | chr8.1:20480849-20480868 | MS.gene057148:intron | 35.0% |
| !!! | AGGTATGGGTTTTGTTCAAA+AGG | + | chr8.1:20483239-20483258 | None:intergenic | 35.0% |
| !!! | CCTAATTATGGGTTTTAGGT+AGG | - | chr8.1:20481551-20481570 | MS.gene057148:CDS | 35.0% |
| !!! | GGTCTATTCCACAACTTTTT+TGG | + | chr8.1:20482909-20482928 | None:intergenic | 35.0% |
| !!! | GTGTTTTTCTGGTTGATTTG+AGG | - | chr8.1:20482397-20482416 | MS.gene057148:intron | 35.0% |
| !!! | TACCCTGTTTTTTACACAAG+AGG | + | chr8.1:20482763-20482782 | None:intergenic | 35.0% |
| !!! | TTACACAAGAGGTTTTTTCC+TGG | + | chr8.1:20482752-20482771 | None:intergenic | 35.0% |
| !!! | TTGCTTCTTTTTCGGTAACA+GGG | + | chr8.1:20483197-20483216 | None:intergenic | 35.0% |
| !!! | TTTTAAGATACTTCCGGATC+AGG | - | chr8.1:20481078-20481097 | MS.gene057148:intron | 35.0% |
| !!! | TTTTCTTGTTGTTACGACAC+AGG | - | chr8.1:20480848-20480867 | MS.gene057148:intron | 35.0% |
| AAACCCAACAGTGTAAAGAG+TGG | - | chr8.1:20483267-20483286 | MS.gene057148:intron | 40.0% | |
| AAACTCTGGATTCTACTAGC+AGG | + | chr8.1:20482954-20482973 | None:intergenic | 40.0% | |
| ACACACAATTCTGCGAACAT+AGG | + | chr8.1:20483056-20483075 | None:intergenic | 40.0% | |
| ACACAGGGTTCAGTTTGTAA+AGG | - | chr8.1:20480864-20480883 | MS.gene057148:intron | 40.0% | |
| ACGAGAGAAGCAATTAAGTG+GGG | + | chr8.1:20480425-20480444 | None:intergenic | 40.0% | |
| ACTAAAAGCTCCACCAATAC+CGG | - | chr8.1:20480389-20480408 | MS.gene057148:intron | 40.0% | |
| AGGAAGGCGAATTATGTGAA+TGG | - | chr8.1:20483521-20483540 | MS.gene057148:CDS | 40.0% | |
| AGTGCACTAAAACTCCAACA+GGG | + | chr8.1:20482820-20482839 | None:intergenic | 40.0% | |
| ATAACTTTACCGTTGCACCA+AGG | + | chr8.1:20482697-20482716 | None:intergenic | 40.0% | |
| ATGCTCATCAAAGCAAACTG+TGG | + | chr8.1:20482872-20482891 | None:intergenic | 40.0% | |
| ATTCTCTTAGCCATGGATGT+AGG | + | chr8.1:20483555-20483574 | None:intergenic | 40.0% | |
| CAACCACTCTTTACACTGTT+GGG | + | chr8.1:20483273-20483292 | None:intergenic | 40.0% | |
| CACTATGGTATATCCTGATC+CGG | + | chr8.1:20481094-20481113 | None:intergenic | 40.0% | |
| CATTGAGAATGGGATACTAG+TGG | + | chr8.1:20482140-20482159 | None:intergenic | 40.0% | |
| CCAATTGAACACCCTTACAA+TGG | + | chr8.1:20481250-20481269 | None:intergenic | 40.0% | |
| CTAGTATCCCATTCTCAATG+AGG | - | chr8.1:20482140-20482159 | MS.gene057148:intron | 40.0% | |
| CTGAAGAGACACTGTTGTAA+GGG | - | chr8.1:20481171-20481190 | MS.gene057148:intron | 40.0% | |
| CTGCAGCAAATGGAAATAAC+TGG | + | chr8.1:20483489-20483508 | None:intergenic | 40.0% | |
| GCAGAATTGTGTGTAAGTGT+GGG | - | chr8.1:20483062-20483081 | MS.gene057148:CDS | 40.0% | |
| GGATACCATGGCCTAATTAT+GGG | - | chr8.1:20481540-20481559 | MS.gene057148:CDS | 40.0% | |
| GTAACTGGATGGTTGGAATT+AGG | + | chr8.1:20481850-20481869 | None:intergenic | 40.0% | |
| GTGAAACCCTCATTGAGAAT+GGG | + | chr8.1:20482150-20482169 | None:intergenic | 40.0% | |
| GTTATACCATAGACACAACG+GGG | + | chr8.1:20482112-20482131 | None:intergenic | 40.0% | |
| TAAGGCTACACCAAAATGGT+GGG | - | chr8.1:20482781-20482800 | MS.gene057148:intron | 40.0% | |
| TCTCTTCAAGATGGATACCA+TGG | - | chr8.1:20481528-20481547 | MS.gene057148:CDS | 40.0% | |
| TCTGAAGAGACACTGTTGTA+AGG | - | chr8.1:20481170-20481189 | MS.gene057148:intron | 40.0% | |
| TGGATACCATGGCCTAATTA+TGG | - | chr8.1:20481539-20481558 | MS.gene057148:CDS | 40.0% | |
| TGTGAAACCCTCATTGAGAA+TGG | + | chr8.1:20482151-20482170 | None:intergenic | 40.0% | |
| TTGTTAACACTCTCCCTCTA+AGG | - | chr8.1:20481117-20481136 | MS.gene057148:intron | 40.0% | |
| ! | AAGGAAATGCAGAAAGGTGT+TGG | + | chr8.1:20480313-20480332 | None:intergenic | 40.0% |
| ! | CTTTACACTGTTGGGTTTTG+TGG | + | chr8.1:20483265-20483284 | None:intergenic | 40.0% |
| ! | GGATTTTGTAACTGGATGGT+TGG | + | chr8.1:20481857-20481876 | None:intergenic | 40.0% |
| ! | TAGAAACAACCTTGGTGCAA+CGG | - | chr8.1:20482685-20482704 | MS.gene057148:intron | 40.0% |
| ! | TATTGGTGGAGCTTTTAGTG+CGG | + | chr8.1:20480388-20480407 | None:intergenic | 40.0% |
| ! | TCTTGTGATGAACTTTTGGC+AGG | - | chr8.1:20482436-20482455 | MS.gene057148:intron | 40.0% |
| !! | AAGCATTTTAGGTGATGCAC+AGG | - | chr8.1:20483145-20483164 | MS.gene057148:intron | 40.0% |
| !! | ACACGCTCTAAGATAGGTAT+AGG | - | chr8.1:20481366-20481385 | MS.gene057148:intron | 40.0% |
| !! | ACTTTGCTGTTGAAACAGGA+AGG | - | chr8.1:20482303-20482322 | MS.gene057148:intron | 40.0% |
| !! | AGCATTTTAGGTGATGCACA+GGG | - | chr8.1:20483146-20483165 | MS.gene057148:intron | 40.0% |
| !! | AGGAAATGCAGAAAGGTGTT+GGG | + | chr8.1:20480312-20480331 | None:intergenic | 40.0% |
| !! | ATGGTTTCAGGAGCATTACA+AGG | - | chr8.1:20482034-20482053 | MS.gene057148:intron | 40.0% |
| !! | CCATTGTAAGGGTGTTCAAT+TGG | - | chr8.1:20481247-20481266 | MS.gene057148:intron | 40.0% |
| !! | GCTCACTGTTGCTTCTTTTT+CGG | + | chr8.1:20483205-20483224 | None:intergenic | 40.0% |
| !! | GGTTTTATGTTTGCAAGGCT+TGG | - | chr8.1:20482195-20482214 | MS.gene057148:intron | 40.0% |
| !! | TGTTGGAGTTTTAGTGCACT+GGG | - | chr8.1:20482820-20482839 | MS.gene057148:intron | 40.0% |
| !! | TTCTGGTTGATTTGAGGATG+TGG | - | chr8.1:20482403-20482422 | MS.gene057148:intron | 40.0% |
| !!! | GTTGCTTCTTTTTCGGTAAC+AGG | + | chr8.1:20483198-20483217 | None:intergenic | 40.0% |
| AACCATAGAGCTGCAGCAAA+TGG | + | chr8.1:20483499-20483518 | None:intergenic | 45.0% | |
| AAGTCTCCTCTTATTGTGCC+TGG | + | chr8.1:20482287-20482306 | None:intergenic | 45.0% | |
| AGGGTAAGGCTACACCAAAA+TGG | - | chr8.1:20482777-20482796 | MS.gene057148:intron | 45.0% | |
| AGTCGATCTATGGTGAGAAG+GGG | - | chr8.1:20481397-20481416 | MS.gene057148:intron | 45.0% | |
| ATCTATGGTGAGAAGGGGAT+TGG | - | chr8.1:20481402-20481421 | MS.gene057148:intron | 45.0% | |
| CAAACATGAATGTCAGGGTC+TGG | - | chr8.1:20481478-20481497 | MS.gene057148:CDS | 45.0% | |
| CAGTGCACTAAAACTCCAAC+AGG | + | chr8.1:20482821-20482840 | None:intergenic | 45.0% | |
| CCATCAGCACGTAAGCTTAT+AGG | - | chr8.1:20482236-20482255 | MS.gene057148:intron | 45.0% | |
| CCTATAAGCTTACGTGCTGA+TGG | + | chr8.1:20482239-20482258 | None:intergenic | 45.0% | |
| CGCAGAATTGTGTGTAAGTG+TGG | - | chr8.1:20483061-20483080 | MS.gene057148:CDS | 45.0% | |
| CGGATCAGGATATACCATAG+TGG | - | chr8.1:20481092-20481111 | MS.gene057148:intron | 45.0% | |
| GAAAATGGCGAGCGTGAAAT+AGG | - | chr8.1:20482486-20482505 | MS.gene057148:intron | 45.0% | |
| GAGAAGCAATTAAGTGGGGA+AGG | + | chr8.1:20480421-20480440 | None:intergenic | 45.0% | |
| GAGTCGATCTATGGTGAGAA+GGG | - | chr8.1:20481396-20481415 | MS.gene057148:intron | 45.0% | |
| GCAACCACTCTTTACACTGT+TGG | + | chr8.1:20483274-20483293 | None:intergenic | 45.0% | |
| GCTGTTGAAACAGGAAGGTA+AGG | - | chr8.1:20482308-20482327 | MS.gene057148:intron | 45.0% | |
| GTAAGGCTACACCAAAATGG+TGG | - | chr8.1:20482780-20482799 | MS.gene057148:intron | 45.0% | |
| TAAGTGGGGAAGGAAAATGC+CGG | + | chr8.1:20480411-20480430 | None:intergenic | 45.0% | |
| TATGTTTGCAAGGCTTGGGA+GGG | - | chr8.1:20482200-20482219 | MS.gene057148:intron | 45.0% | |
| TCATGTGACTGAAAGGTCAC+AGG | - | chr8.1:20482719-20482738 | MS.gene057148:intron | 45.0% | |
| TTATGTTTGCAAGGCTTGGG+AGG | - | chr8.1:20482199-20482218 | MS.gene057148:intron | 45.0% | |
| TTCTGGTGTTTGTGTTGCGT+AGG | + | chr8.1:20480271-20480290 | None:intergenic | 45.0% | |
| ! | AAGGAAAATGCCGGTATTGG+TGG | + | chr8.1:20480402-20480421 | None:intergenic | 45.0% |
| ! | ACTGTTGTAAGGGTGTGCAA+TGG | - | chr8.1:20481181-20481200 | MS.gene057148:intron | 45.0% |
| ! | GATCTCTTTTTGCTCTGCTC+TGG | + | chr8.1:20481459-20481478 | None:intergenic | 45.0% |
| ! | GCTTTTAGTGCGGATGGTTT+TGG | + | chr8.1:20480378-20480397 | None:intergenic | 45.0% |
| ! | TTCCATTTGCTGCAGCTCTA+TGG | - | chr8.1:20483494-20483513 | MS.gene057148:CDS | 45.0% |
| !! | AAAATGGTGGGACCCCTTTT+CGG | - | chr8.1:20482793-20482812 | MS.gene057148:intron | 45.0% |
| !! | AAATGCAGAAAGGTGTTGGG+TGG | + | chr8.1:20480309-20480328 | None:intergenic | 45.0% |
| !! | ATTTCACGCTCGCCATTTTC+AGG | + | chr8.1:20482486-20482505 | None:intergenic | 45.0% |
| !! | CTGTTGGAGTTTTAGTGCAC+TGG | - | chr8.1:20482819-20482838 | MS.gene057148:intron | 45.0% |
| !! | GAGCAAACACGCTCTAAGAT+AGG | - | chr8.1:20481360-20481379 | MS.gene057148:intron | 45.0% |
| !! | GGAGACTTTGCTGTTGAAAC+AGG | - | chr8.1:20482299-20482318 | MS.gene057148:intron | 45.0% |
| !! | GTAAGGGTGTTCAATTGGAG+AGG | - | chr8.1:20481252-20481271 | MS.gene057148:intron | 45.0% |
| !! | GTTGCACCAAGGTTGTTTCT+AGG | + | chr8.1:20482686-20482705 | None:intergenic | 45.0% |
| !! | TACACTGTTGGGTTTTGTGG+TGG | + | chr8.1:20483262-20483281 | None:intergenic | 45.0% |
| !! | TTTCACGCTCGCCATTTTCA+GGG | + | chr8.1:20482485-20482504 | None:intergenic | 45.0% |
| AACTCCAACAGGGTCCGAAA+AGG | + | chr8.1:20482810-20482829 | None:intergenic | 50.0% | |
| AAGGTCACAGGTTCAAGTCC+AGG | - | chr8.1:20482731-20482750 | MS.gene057148:intron | 50.0% | |
| AATCCTCTGCAAGCAGAACC+AGG | - | chr8.1:20482266-20482285 | MS.gene057148:intron | 50.0% | |
| ACTCCAACAGGGTCCGAAAA+GGG | + | chr8.1:20482809-20482828 | None:intergenic | 50.0% | |
| CAGTGTAAAGAGTGGTTGCG+AGG | - | chr8.1:20483275-20483294 | MS.gene057148:intron | 50.0% | |
| CTTAGCCATGGATGTAGGAC+AGG | + | chr8.1:20483550-20483569 | None:intergenic | 50.0% | |
| GAGGCGTGATGCAGTTGTAA+GGG | - | chr8.1:20481206-20481225 | MS.gene057148:intron | 50.0% | |
| GCAGAACCAGGCACAATAAG+AGG | - | chr8.1:20482278-20482297 | MS.gene057148:intron | 50.0% | |
| GCAGCTCTATGGTTCAAGGA+AGG | - | chr8.1:20483505-20483524 | MS.gene057148:CDS | 50.0% | |
| GGAGTCGATCTATGGTGAGA+AGG | - | chr8.1:20481395-20481414 | MS.gene057148:intron | 50.0% | |
| GGGAAGGAAAATGCCGGTAT+TGG | + | chr8.1:20480405-20480424 | None:intergenic | 50.0% | |
| GGTATACGGGAGTCGATCTA+TGG | - | chr8.1:20481387-20481406 | MS.gene057148:intron | 50.0% | |
| GGTGCGTAATTGAGAGCTTC+TGG | + | chr8.1:20480288-20480307 | None:intergenic | 50.0% | |
| GTTTGTGTTGCGTAGGAGAG+AGG | + | chr8.1:20480264-20480283 | None:intergenic | 50.0% | |
| TCAGGATCACTCTTCGCTGT+TGG | + | chr8.1:20483015-20483034 | None:intergenic | 50.0% | |
| TGCTGCAGCTCTATGGTTCA+AGG | - | chr8.1:20483501-20483520 | MS.gene057148:CDS | 50.0% | |
| TGGCGAGCGTGAAATAGGTA+AGG | - | chr8.1:20482491-20482510 | MS.gene057148:intron | 50.0% | |
| TTACAATGGCACCTCAGCTG+TGG | + | chr8.1:20481236-20481255 | None:intergenic | 50.0% | |
| ! | GAAAAGGGGTCCCACCATTT+TGG | + | chr8.1:20482794-20482813 | None:intergenic | 50.0% |
| ! | GTTGTAAGGGTGTGCAATGG+CGG | - | chr8.1:20481184-20481203 | MS.gene057148:intron | 50.0% |
| !! | ACAGCTGAGGTGCCATTGTA+AGG | - | chr8.1:20481235-20481254 | MS.gene057148:intron | 50.0% |
| !! | ACTGTTGGGTTTTGTGGTGG+AGG | + | chr8.1:20483259-20483278 | None:intergenic | 50.0% |
| !! | CAGCTGAGGTGCCATTGTAA+GGG | - | chr8.1:20481236-20481255 | MS.gene057148:intron | 50.0% |
| !! | GGGTTTTGTGGTGGAGGTAT+GGG | + | chr8.1:20483253-20483272 | None:intergenic | 50.0% |
| !! | TGGGTTTTGTGGTGGAGGTA+TGG | + | chr8.1:20483254-20483273 | None:intergenic | 50.0% |
| !!! | AGTGCGGATGGTTTTGGCAT+AGG | + | chr8.1:20480372-20480391 | None:intergenic | 50.0% |
| AAGACCACGTTGCACGCCAT+CGG | + | chr8.1:20480563-20480582 | None:intergenic | 55.0% | |
| CTCCAACAGGGTCCGAAAAG+GGG | + | chr8.1:20482808-20482827 | None:intergenic | 55.0% | |
| GGACTCCTGTCCTACATCCA+TGG | - | chr8.1:20483542-20483561 | MS.gene057148:CDS | 55.0% | |
| GGCAGTGACAGCCCTGAAAA+TGG | - | chr8.1:20482471-20482490 | MS.gene057148:intron | 55.0% | |
| ! | GAAGCCATGGGCGTGTTTTG+CGG | - | chr8.1:20480215-20480234 | MS.gene057148:CDS | 55.0% |
| ! | GGAGGCGTGATGCAGTTGTA+AGG | - | chr8.1:20481205-20481224 | MS.gene057148:intron | 55.0% |
| ! | GGTGGAGCTTTTAGTGCGGA+TGG | + | chr8.1:20480384-20480403 | None:intergenic | 55.0% |
| AAACCCGATGGCGTGCAACG+TGG | - | chr8.1:20480556-20480575 | MS.gene057148:intron | 60.0% | |
| AGACCACGTTGCACGCCATC+GGG | + | chr8.1:20480562-20480581 | None:intergenic | 60.0% | |
| GCTTCCGCAAAACACGCCCA+TGG | + | chr8.1:20480222-20480241 | None:intergenic | 60.0% | |
| TTCGGGCCCCGTTGTGTCTA+TGG | - | chr8.1:20482103-20482122 | MS.gene057148:intron | 60.0% | |
| ! | GACCCCTTTTCGGACCCTGT+TGG | - | chr8.1:20482803-20482822 | MS.gene057148:intron | 60.0% |
| ! | GTAAGGGTGTGCAATGGCGG+AGG | - | chr8.1:20481187-20481206 | MS.gene057148:intron | 60.0% |
| ! | TGCAAGGCTTGGGAGGGTGT+TGG | - | chr8.1:20482206-20482225 | MS.gene057148:intron | 60.0% |
| !! | GTGCCTGGTTCTGCTTGCAG+AGG | + | chr8.1:20482272-20482291 | None:intergenic | 60.0% |
| ! | GTAAGGGCACGCCACAGCTG+AGG | - | chr8.1:20481222-20481241 | MS.gene057148:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 20480212 | 20483576 | 20480212 | ID=MS.gene057148 |
| chr8.1 | mRNA | 20480212 | 20483576 | 20480212 | ID=MS.gene057148.t1;Parent=MS.gene057148 |
| chr8.1 | exon | 20483346 | 20483576 | 20483346 | ID=MS.gene057148.t1.exon1;Parent=MS.gene057148.t1 |
| chr8.1 | CDS | 20483346 | 20483576 | 20483346 | ID=cds.MS.gene057148.t1;Parent=MS.gene057148.t1 |
| chr8.1 | exon | 20483206 | 20483262 | 20483206 | ID=MS.gene057148.t1.exon2;Parent=MS.gene057148.t1 |
| chr8.1 | CDS | 20483206 | 20483262 | 20483206 | ID=cds.MS.gene057148.t1;Parent=MS.gene057148.t1 |
| chr8.1 | exon | 20483005 | 20483091 | 20483005 | ID=MS.gene057148.t1.exon3;Parent=MS.gene057148.t1 |
| chr8.1 | CDS | 20483005 | 20483091 | 20483005 | ID=cds.MS.gene057148.t1;Parent=MS.gene057148.t1 |
| chr8.1 | exon | 20481664 | 20481744 | 20481664 | ID=MS.gene057148.t1.exon4;Parent=MS.gene057148.t1 |
| chr8.1 | CDS | 20481664 | 20481744 | 20481664 | ID=cds.MS.gene057148.t1;Parent=MS.gene057148.t1 |
| chr8.1 | exon | 20481464 | 20481576 | 20481464 | ID=MS.gene057148.t1.exon5;Parent=MS.gene057148.t1 |
| chr8.1 | CDS | 20481464 | 20481576 | 20481464 | ID=cds.MS.gene057148.t1;Parent=MS.gene057148.t1 |
| chr8.1 | exon | 20481281 | 20481330 | 20481281 | ID=MS.gene057148.t1.exon6;Parent=MS.gene057148.t1 |
| chr8.1 | CDS | 20481281 | 20481330 | 20481281 | ID=cds.MS.gene057148.t1;Parent=MS.gene057148.t1 |
| chr8.1 | exon | 20480212 | 20480279 | 20480212 | ID=MS.gene057148.t1.exon7;Parent=MS.gene057148.t1 |
| chr8.1 | CDS | 20480212 | 20480279 | 20480212 | ID=cds.MS.gene057148.t1;Parent=MS.gene057148.t1 |
| Gene Sequence |
| Protein sequence |
