Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063179.t1 | XP_013462017.1 | 91.5 | 434 | 25 | 2 | 1 | 426 | 1 | 430 | 7.70E-224 | 786.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063179.t1 | Q93Z18 | 58.2 | 428 | 150 | 6 | 1 | 416 | 1 | 411 | 1.7e-131 | 470.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063179.t1 | A0A072V2G9 | 91.5 | 434 | 25 | 2 | 1 | 426 | 1 | 430 | 5.6e-224 | 786.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene053625 | MS.gene063179 | 0.801716 | 7.90E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063179.t1 | MTR_3g110180 | 95.853 | 434 | 6 | 2 | 1 | 426 | 1 | 430 | 0.0 | 858 |
MS.gene063179.t1 | MTR_3g110180 | 95.622 | 434 | 6 | 3 | 1 | 426 | 1 | 429 | 0.0 | 825 |
MS.gene063179.t1 | MTR_1g004990 | 60.417 | 432 | 152 | 3 | 1 | 424 | 1 | 421 | 0.0 | 523 |
MS.gene063179.t1 | MTR_6g087070 | 62.044 | 411 | 132 | 6 | 1 | 400 | 1 | 398 | 0.0 | 513 |
MS.gene063179.t1 | MTR_8g102930 | 59.039 | 437 | 155 | 6 | 1 | 426 | 1 | 424 | 5.83e-177 | 501 |
MS.gene063179.t1 | MTR_4g126010 | 64.162 | 346 | 109 | 3 | 1 | 337 | 1 | 340 | 1.68e-163 | 468 |
MS.gene063179.t1 | MTR_2g099670 | 65.205 | 342 | 108 | 3 | 1 | 331 | 1 | 342 | 2.54e-163 | 468 |
MS.gene063179.t1 | MTR_1g069720 | 66.352 | 318 | 99 | 1 | 1 | 310 | 1 | 318 | 4.24e-160 | 459 |
MS.gene063179.t1 | MTR_1g042280 | 67.752 | 307 | 91 | 1 | 1 | 299 | 2 | 308 | 1.71e-157 | 452 |
MS.gene063179.t1 | MTR_7g097160 | 65.312 | 320 | 103 | 1 | 1 | 312 | 1 | 320 | 6.66e-157 | 451 |
MS.gene063179.t1 | MTR_2g039930 | 58.933 | 375 | 129 | 6 | 1 | 356 | 1 | 369 | 1.52e-156 | 451 |
MS.gene063179.t1 | MTR_8g018310 | 64.179 | 335 | 103 | 4 | 1 | 327 | 1 | 326 | 2.33e-156 | 450 |
MS.gene063179.t1 | MTR_8g018310 | 64.179 | 335 | 103 | 4 | 1 | 327 | 1 | 326 | 1.75e-155 | 446 |
MS.gene063179.t1 | MTR_1g075870 | 65.015 | 323 | 97 | 2 | 1 | 315 | 2 | 316 | 2.20e-155 | 442 |
MS.gene063179.t1 | MTR_1g075870 | 65.015 | 323 | 97 | 2 | 1 | 315 | 2 | 316 | 2.29e-154 | 445 |
MS.gene063179.t1 | MTR_1g042280 | 70.149 | 268 | 80 | 0 | 32 | 299 | 9 | 276 | 9.31e-145 | 414 |
MS.gene063179.t1 | MTR_0492s0030 | 65.000 | 300 | 95 | 2 | 1 | 290 | 1 | 300 | 1.96e-140 | 406 |
MS.gene063179.t1 | MTR_0543s0020 | 65.000 | 300 | 95 | 2 | 1 | 290 | 1 | 300 | 1.96e-140 | 406 |
MS.gene063179.t1 | MTR_2g099670 | 68.214 | 280 | 86 | 2 | 55 | 331 | 11 | 290 | 3.93e-140 | 407 |
MS.gene063179.t1 | MTR_1g075870 | 68.045 | 266 | 77 | 1 | 50 | 315 | 2 | 259 | 4.18e-134 | 387 |
MS.gene063179.t1 | MTR_2g039930 | 60.204 | 294 | 100 | 5 | 74 | 356 | 1 | 288 | 1.11e-122 | 362 |
MS.gene063179.t1 | MTR_7g097160 | 68.927 | 177 | 55 | 0 | 136 | 312 | 25 | 201 | 2.61e-85 | 264 |
MS.gene063179.t1 | MTR_3g110240 | 37.121 | 264 | 155 | 5 | 7 | 265 | 133 | 390 | 7.91e-51 | 182 |
MS.gene063179.t1 | MTR_1g007150 | 36.364 | 264 | 157 | 5 | 7 | 265 | 136 | 393 | 7.45e-50 | 179 |
MS.gene063179.t1 | MTR_7g006030 | 35.206 | 267 | 162 | 5 | 7 | 265 | 49 | 312 | 8.55e-50 | 178 |
MS.gene063179.t1 | MTR_7g085540 | 36.296 | 270 | 162 | 5 | 7 | 269 | 159 | 425 | 2.59e-49 | 178 |
MS.gene063179.t1 | MTR_1g116210 | 34.286 | 280 | 162 | 6 | 5 | 265 | 113 | 389 | 2.94e-47 | 172 |
MS.gene063179.t1 | MTR_8g014050 | 34.444 | 270 | 161 | 7 | 7 | 265 | 140 | 404 | 1.47e-42 | 159 |
MS.gene063179.t1 | MTR_7g116400 | 52.308 | 65 | 30 | 1 | 74 | 137 | 3 | 67 | 7.64e-16 | 72.8 |
MS.gene063179.t1 | MTR_7g118020 | 26.728 | 217 | 133 | 5 | 6 | 205 | 141 | 348 | 7.21e-12 | 67.8 |
MS.gene063179.t1 | MTR_4g086660 | 29.448 | 163 | 105 | 3 | 44 | 205 | 188 | 341 | 7.91e-12 | 67.4 |
MS.gene063179.t1 | MTR_7g073520 | 32.800 | 125 | 71 | 3 | 99 | 221 | 250 | 363 | 8.38e-12 | 67.4 |
MS.gene063179.t1 | MTR_8g079790 | 28.221 | 163 | 107 | 3 | 44 | 205 | 179 | 332 | 1.48e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063179.t1 | AT4G28880 | 59.346 | 428 | 145 | 6 | 1 | 416 | 1 | 411 | 5.05e-178 | 503 |
MS.gene063179.t1 | AT4G28880 | 59.346 | 428 | 145 | 6 | 1 | 416 | 1 | 411 | 5.05e-178 | 503 |
MS.gene063179.t1 | AT4G28880 | 59.346 | 428 | 145 | 6 | 1 | 416 | 1 | 411 | 5.05e-178 | 503 |
MS.gene063179.t1 | AT4G28880 | 59.346 | 428 | 145 | 6 | 1 | 416 | 1 | 411 | 5.05e-178 | 503 |
MS.gene063179.t1 | AT4G28860 | 59.569 | 418 | 144 | 5 | 1 | 409 | 1 | 402 | 2.60e-176 | 499 |
MS.gene063179.t1 | AT4G28860 | 71.384 | 318 | 83 | 1 | 1 | 310 | 1 | 318 | 7.65e-175 | 494 |
MS.gene063179.t1 | AT4G26100 | 55.422 | 415 | 143 | 9 | 1 | 399 | 1 | 389 | 2.67e-159 | 457 |
MS.gene063179.t1 | AT5G57015 | 64.308 | 325 | 106 | 2 | 1 | 315 | 1 | 325 | 1.34e-156 | 449 |
MS.gene063179.t1 | AT1G72710 | 64.329 | 328 | 107 | 3 | 1 | 319 | 1 | 327 | 1.42e-156 | 451 |
MS.gene063179.t1 | AT5G44100 | 69.360 | 297 | 83 | 1 | 1 | 289 | 1 | 297 | 1.84e-155 | 448 |
MS.gene063179.t1 | AT5G44100 | 69.360 | 297 | 83 | 1 | 1 | 289 | 1 | 297 | 1.84e-155 | 448 |
MS.gene063179.t1 | AT1G03930 | 67.340 | 297 | 89 | 1 | 1 | 289 | 1 | 297 | 1.97e-154 | 445 |
MS.gene063179.t1 | AT4G28540 | 68.121 | 298 | 87 | 1 | 1 | 290 | 5 | 302 | 4.38e-154 | 445 |
MS.gene063179.t1 | AT3G23340 | 64.688 | 320 | 104 | 2 | 1 | 312 | 1 | 319 | 5.93e-154 | 443 |
MS.gene063179.t1 | AT2G19470 | 62.614 | 329 | 108 | 2 | 1 | 321 | 1 | 322 | 2.17e-153 | 441 |
MS.gene063179.t1 | AT4G14340 | 64.062 | 320 | 106 | 2 | 1 | 312 | 7 | 325 | 6.82e-152 | 438 |
MS.gene063179.t1 | AT4G14340 | 62.090 | 335 | 111 | 2 | 1 | 327 | 7 | 333 | 9.54e-152 | 434 |
MS.gene063179.t1 | AT5G43320 | 68.013 | 297 | 87 | 1 | 1 | 289 | 1 | 297 | 2.26e-150 | 435 |
MS.gene063179.t1 | AT3G23340 | 64.423 | 312 | 104 | 2 | 1 | 312 | 1 | 305 | 8.44e-150 | 432 |
MS.gene063179.t1 | AT5G43320 | 61.383 | 347 | 122 | 3 | 1 | 339 | 1 | 343 | 1.44e-149 | 429 |
MS.gene063179.t1 | AT5G43320 | 61.383 | 347 | 122 | 3 | 1 | 339 | 1 | 343 | 1.44e-149 | 429 |
MS.gene063179.t1 | AT1G04440 | 67.340 | 297 | 89 | 1 | 1 | 289 | 1 | 297 | 2.20e-148 | 430 |
MS.gene063179.t1 | AT4G08800 | 58.163 | 294 | 83 | 3 | 1 | 286 | 1 | 262 | 9.53e-121 | 353 |
MS.gene063179.t1 | AT3G13670 | 35.424 | 271 | 164 | 5 | 7 | 269 | 149 | 416 | 1.51e-50 | 182 |
MS.gene063179.t1 | AT2G25760 | 36.194 | 268 | 162 | 4 | 7 | 265 | 119 | 386 | 2.27e-50 | 181 |
MS.gene063179.t1 | AT3G03940 | 36.296 | 270 | 162 | 5 | 7 | 269 | 152 | 418 | 2.44e-50 | 181 |
MS.gene063179.t1 | AT2G25760 | 36.567 | 268 | 158 | 5 | 7 | 265 | 119 | 383 | 7.72e-50 | 179 |
MS.gene063179.t1 | AT5G18190 | 35.662 | 272 | 165 | 5 | 7 | 271 | 142 | 410 | 3.00e-49 | 178 |
MS.gene063179.t1 | AT5G18190 | 35.662 | 272 | 165 | 5 | 7 | 271 | 142 | 410 | 3.00e-49 | 178 |
MS.gene063179.t1 | AT3G50530 | 30.061 | 163 | 104 | 3 | 44 | 205 | 199 | 352 | 2.48e-13 | 72.4 |
MS.gene063179.t1 | AT3G49370 | 28.440 | 218 | 130 | 6 | 7 | 207 | 140 | 348 | 1.04e-11 | 67.4 |
MS.gene063179.t1 | AT3G50530 | 28.495 | 186 | 108 | 6 | 44 | 205 | 199 | 383 | 3.84e-11 | 65.5 |
MS.gene063179.t1 | AT5G24430 | 27.854 | 219 | 130 | 6 | 7 | 207 | 141 | 349 | 3.97e-11 | 65.5 |
MS.gene063179.t1 | AT2G46700 | 29.082 | 196 | 118 | 5 | 11 | 205 | 172 | 347 | 9.51e-11 | 64.3 |
Find 98 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAGTTCCTGTGGGCCTTTC+AGG | 0.062348 | 3.3:-90629877 | None:intergenic |
TCAAACCTAGGTCGTGTATT+TGG | 0.098979 | 3.3:+90629898 | MS.gene063179:CDS |
AGGAATATGCTTGCTTGTTT+TGG | 0.195324 | 3.3:-90626613 | None:intergenic |
TATTCTGGTTATGGATCTTC+TGG | 0.212846 | 3.3:+90626016 | MS.gene063179:CDS |
TTTGATCAAGATCCAGATTA+TGG | 0.217415 | 3.3:+90628147 | MS.gene063179:CDS |
TTGGAGAAGACTGTATAATT+TGG | 0.243957 | 3.3:-90625843 | None:intergenic |
GAATCCAGCTGCTTGAAATA+TGG | 0.275973 | 3.3:-90629930 | None:intergenic |
CAAGCAAGCATATTCCTTAT+AGG | 0.278492 | 3.3:+90626619 | MS.gene063179:CDS |
ATAACTTCCTAATGGGTATT+AGG | 0.293154 | 3.3:+90626411 | MS.gene063179:CDS |
GCAGCTGGATTCCTTCTTTA+CGG | 0.295950 | 3.3:+90629941 | MS.gene063179:CDS |
AGAGAGAATAAAAGTTTAAC+AGG | 0.303019 | 3.3:+90627411 | MS.gene063179:intron |
CAAACCTAGGTCGTGTATTT+GGG | 0.321394 | 3.3:+90629899 | MS.gene063179:CDS |
GCAAAGTCGCCGTGATGATT+TGG | 0.329153 | 3.3:+90627557 | MS.gene063179:CDS |
ATACCCATTAGGAAGTTATC+TGG | 0.331317 | 3.3:-90626407 | None:intergenic |
TAGGTTTATATTATTGATTT+CGG | 0.339874 | 3.3:+90626567 | MS.gene063179:intron |
TGATGGAGATCATAATATTC+TGG | 0.354764 | 3.3:+90626001 | MS.gene063179:CDS |
GGATCTTCTGGGACGTAGTC+TGG | 0.355238 | 3.3:+90626028 | MS.gene063179:CDS |
AGCATTTAGATTCTTTAGAT+TGG | 0.357090 | 3.3:-90629570 | None:intergenic |
CAAACCAGATAACTTCCTAA+TGG | 0.358154 | 3.3:+90626403 | MS.gene063179:CDS |
CGCTTTAAGAATCCATAATC+TGG | 0.362175 | 3.3:-90628159 | None:intergenic |
GTCCTTATGTACTTCTTAAG+AGG | 0.366081 | 3.3:+90627594 | MS.gene063179:CDS |
AACAACAAAATATACCTATA+AGG | 0.367234 | 3.3:-90626633 | None:intergenic |
CGTGATGATTTGGAGTCTAT+TGG | 0.367974 | 3.3:+90627567 | MS.gene063179:CDS |
AGATCATAATATTCTGGTTA+TGG | 0.373211 | 3.3:+90626007 | MS.gene063179:CDS |
TGAGGTCGTTGCCGTCAAAA+TGG | 0.379560 | 3.3:+90625323 | MS.gene063179:CDS |
TTTAAGATTGGTCGCAAAAT+CGG | 0.381240 | 3.3:+90625159 | MS.gene063179:CDS |
TATATTATTGATTTCGGACT+AGG | 0.399991 | 3.3:+90626573 | MS.gene063179:CDS |
CACATTTGGACGATCAAGAT+TGG | 0.402023 | 3.3:-90629528 | None:intergenic |
TTAGGCTGCACACGCACATT+TGG | 0.429031 | 3.3:-90629542 | None:intergenic |
AAACCAGATAACTTCCTAAT+GGG | 0.430261 | 3.3:+90626404 | MS.gene063179:CDS |
TTTATAACTTACTTTCTCCT+TGG | 0.432685 | 3.3:-90625862 | None:intergenic |
AATCCAGCTGCTTGAAATAT+GGG | 0.440658 | 3.3:-90629929 | None:intergenic |
ACTCCCATATTTCAAGCAGC+TGG | 0.449190 | 3.3:+90629926 | MS.gene063179:CDS |
TGCTCCCGCAGAAGACAAAA+AGG | 0.451965 | 3.3:-90626055 | None:intergenic |
TTTAGATTCTTTAGATTGGA+TGG | 0.456240 | 3.3:-90629566 | None:intergenic |
GTTGGCGGAAAGTTTAAGAT+TGG | 0.473575 | 3.3:+90625147 | MS.gene063179:CDS |
ATTCTGGTTATGGATCTTCT+GGG | 0.476383 | 3.3:+90626017 | MS.gene063179:CDS |
ACTATGACAATTTATTCGAC+TGG | 0.479555 | 3.3:+90628759 | MS.gene063179:CDS |
TGCAATACTCACTTAGGAAT+CGG | 0.487644 | 3.3:+90627453 | MS.gene063179:CDS |
TTCTTTAGATTGGATGGCTT+AGG | 0.488699 | 3.3:-90629560 | None:intergenic |
TTCCTCTTAAGAAGTACATA+AGG | 0.490195 | 3.3:-90627596 | None:intergenic |
GAAGAAATTCGCCGTAAAGA+AGG | 0.496549 | 3.3:-90629952 | None:intergenic |
CAGTCTACAACCAGTGGTTG+TGG | 0.500770 | 3.3:+90629022 | MS.gene063179:CDS |
GTACCGCACCATCTCATAGT+TGG | 0.509024 | 3.3:-90625978 | None:intergenic |
TCTAAATGCTAAGAATCATA+CGG | 0.510015 | 3.3:+90629583 | MS.gene063179:CDS |
CGTGAGTTGTTCACTCGTGA+AGG | 0.516158 | 3.3:+90628189 | MS.gene063179:CDS |
AATAGAGTACATGCATTCCA+AGG | 0.528223 | 3.3:+90626361 | MS.gene063179:CDS |
GCATCCACAACTATTGTATG+AGG | 0.532224 | 3.3:+90625820 | MS.gene063179:CDS |
GCAAGTTGCAATACTCACTT+AGG | 0.533425 | 3.3:+90627447 | MS.gene063179:CDS |
AACATGGAGTGGGTCGTTGG+CGG | 0.534619 | 3.3:+90625132 | None:intergenic |
ACCTAGGTTTGAAGTTCCTG+TGG | 0.540684 | 3.3:-90629887 | None:intergenic |
TATTAGGAGAAAATCAAGTC+AGG | 0.540941 | 3.3:+90626427 | MS.gene063179:CDS |
TTGGCCTCATACAATAGTTG+TGG | 0.548570 | 3.3:-90625824 | None:intergenic |
CAATGATCCGTCCACTTCAT+CGG | 0.549710 | 3.3:+90629819 | MS.gene063179:CDS |
TTATGTACTTCTTAAGAGGA+AGG | 0.553282 | 3.3:+90627598 | MS.gene063179:CDS |
CTTTCAGACCCTGCCAAGGA+AGG | 0.558293 | 3.3:-90627747 | None:intergenic |
ATGAGATGGTGCGGTACTGA+TGG | 0.560221 | 3.3:+90625984 | MS.gene063179:CDS |
AACAACATGGAGTGGGTCGT+TGG | 0.562685 | 3.3:+90625129 | None:intergenic |
TTTGATGTTAGCAGACCAGA+TGG | 0.566646 | 3.3:+90626097 | MS.gene063179:CDS |
TGTAGGAGAAGAAGAGAACA+AGG | 0.572961 | 3.3:+90625798 | MS.gene063179:intron |
CTAAATGCTAAGAATCATAC+GGG | 0.574445 | 3.3:+90629584 | MS.gene063179:CDS |
GAATAAAAGTTTAACAGGGA+CGG | 0.577039 | 3.3:+90627416 | MS.gene063179:CDS |
TTTGGGCAAAGCCGATGAAG+TGG | 0.584387 | 3.3:-90629830 | None:intergenic |
TCTAAGCCTGAAAGGCCCAC+AGG | 0.585651 | 3.3:+90629871 | MS.gene063179:CDS |
GCACTAGGTACGGCATCTGA+AGG | 0.595661 | 3.3:-90628978 | None:intergenic |
TATTCCCAAATACACGACCT+AGG | 0.597805 | 3.3:-90629903 | None:intergenic |
AAAGTAAGACGCAAACTCCA+CGG | 0.599632 | 3.3:-90628103 | None:intergenic |
CATCCGCTAACAACATGGAG+TGG | 0.601509 | 3.3:+90625121 | None:intergenic |
AAGTAAGACGCAAACTCCAC+GGG | 0.604948 | 3.3:-90628102 | None:intergenic |
CCTAGGTTTGAAGTTCCTGT+GGG | 0.606084 | 3.3:-90629886 | None:intergenic |
ACTAGGAACAGCACTAGGTA+CGG | 0.607129 | 3.3:-90628988 | None:intergenic |
ACCACTGGTTGTAGACTGCT+AGG | 0.607910 | 3.3:-90629017 | None:intergenic |
ATCAGCAGACGCAACAGACA+AGG | 0.613053 | 3.3:+90628795 | MS.gene063179:CDS |
ATCCGCTAACAACATGGAGT+GGG | 0.614583 | 3.3:+90625122 | None:intergenic |
TGGATCTTGATCAAATGTCA+AGG | 0.615184 | 3.3:-90628139 | None:intergenic |
GTGGTATTCCAACTATGAGA+TGG | 0.615515 | 3.3:+90625970 | MS.gene063179:CDS |
AGACTGCTAGGCACAGCACT+AGG | 0.616647 | 3.3:-90629005 | None:intergenic |
AAGGAGACAAAAGCAATCAT+CGG | 0.624317 | 3.3:+90628814 | MS.gene063179:CDS |
ATTGGTCGCAAAATCGGAAG+CGG | 0.626522 | 3.3:+90625165 | MS.gene063179:CDS |
CTCAGAGGTGTCCATATCAG+AGG | 0.626948 | 3.3:-90625304 | None:intergenic |
GGCAAAGCCGATGAAGTGGA+CGG | 0.627991 | 3.3:-90629826 | None:intergenic |
AAAATGTCTCTAAGCCTGAA+AGG | 0.629959 | 3.3:+90629863 | MS.gene063179:CDS |
CCCACAGGAACTTCAAACCT+AGG | 0.637853 | 3.3:+90629886 | MS.gene063179:CDS |
AAATTATACAGTCTTCTCCA+AGG | 0.638640 | 3.3:+90625845 | MS.gene063179:CDS |
GCCTAGCAGTCTACAACCAG+TGG | 0.640292 | 3.3:+90629016 | MS.gene063179:CDS |
ACAGCTTTCAGACCCTGCCA+AGG | 0.644712 | 3.3:-90627751 | None:intergenic |
ATTGAAAATGTATACCTCAG+TGG | 0.646544 | 3.3:-90627824 | None:intergenic |
TCTTCTGGGACGTAGTCTGG+AGG | 0.649427 | 3.3:+90626031 | MS.gene063179:CDS |
TCTGAAAGCTGTCACCAAAG+AGG | 0.650261 | 3.3:+90627762 | MS.gene063179:CDS |
ACAGCACTAGGAACAGCACT+AGG | 0.656993 | 3.3:-90628993 | None:intergenic |
ATAGAGTACATGCATTCCAA+GGG | 0.660373 | 3.3:+90626362 | MS.gene063179:CDS |
GCTTTGCGAATCATATCCCG+TGG | 0.663642 | 3.3:+90628086 | MS.gene063179:CDS |
CTCTGATATGGACACCTCTG+AGG | 0.669495 | 3.3:+90625305 | MS.gene063179:CDS |
CAATAGACTCCAAATCATCA+CGG | 0.670210 | 3.3:-90627566 | None:intergenic |
ATTCCAACTATGAGATGGTG+CGG | 0.673968 | 3.3:+90625975 | MS.gene063179:CDS |
GAGAGAATAAAAGTTTAACA+GGG | 0.702224 | 3.3:+90627412 | MS.gene063179:intron |
TTTGACGGCAACGACCTCAG+AGG | 0.711927 | 3.3:-90625319 | None:intergenic |
GAAGTTATCAACTTCCACTG+AGG | 0.761442 | 3.3:+90627810 | MS.gene063179:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GAAAAATAATAATAATAACA+AGG | - | chr3.3:90629329-90629348 | None:intergenic | 10.0% |
!!! | ACATTTTGAATTTTAAAAAA+TGG | + | chr3.3:90627652-90627671 | MS.gene063179:intron | 10.0% |
!!! | ATATTTCTAATCTTTTATTA+TGG | + | chr3.3:90626667-90626686 | MS.gene063179:intron | 10.0% |
!!! | TATTATTATTATTTTTCACT+TGG | + | chr3.3:90629332-90629351 | MS.gene063179:intron | 10.0% |
!! | AAAAAAATGTCTAAATTTGA+TGG | + | chr3.3:90627023-90627042 | MS.gene063179:intron | 15.0% |
!! | AAATAAACTTCTTATTACAT+CGG | - | chr3.3:90628714-90628733 | None:intergenic | 15.0% |
!! | TGATATTAATTATTCTTCAT+TGG | + | chr3.3:90626857-90626876 | MS.gene063179:intron | 15.0% |
!!! | ATTCTTTTTAGGTAAATTTA+GGG | + | chr3.3:90627697-90627716 | MS.gene063179:intron | 15.0% |
!!! | TAAACAAATCAAGTATTTTT+AGG | - | chr3.3:90626728-90626747 | None:intergenic | 15.0% |
!!! | TAGGTTTATATTATTGATTT+CGG | + | chr3.3:90626567-90626586 | MS.gene063179:intron | 15.0% |
!!! | TTGTTTTGATTTTTTTTACT+TGG | + | chr3.3:90629751-90629770 | MS.gene063179:intron | 15.0% |
!! | AAAATTAAGAAGAAATCCAA+TGG | - | chr3.3:90629644-90629663 | None:intergenic | 20.0% |
!! | AACAACAAAATATACCTATA+AGG | - | chr3.3:90626636-90626655 | None:intergenic | 20.0% |
!! | AATAAACTTCTTATTACATC+GGG | - | chr3.3:90628713-90628732 | None:intergenic | 20.0% |
!! | AATAATAACAAGGAATTTGT+TGG | - | chr3.3:90629319-90629338 | None:intergenic | 20.0% |
!! | AATCAGGAAAGTTTAATAAT+CGG | - | chr3.3:90628920-90628939 | None:intergenic | 20.0% |
!! | ATCATAAAATGTTAGATAGT+TGG | - | chr3.3:90628503-90628522 | None:intergenic | 20.0% |
!! | ATGAAACATAAAAGGAATTA+TGG | - | chr3.3:90626510-90626529 | None:intergenic | 20.0% |
!! | CAAAATAGAATGAAATTTGT+GGG | - | chr3.3:90627521-90627540 | None:intergenic | 20.0% |
!! | GAAATTAAAAACTAGATTGA+GGG | - | chr3.3:90627873-90627892 | None:intergenic | 20.0% |
!! | GATGTAATAAGAAGTTTATT+TGG | + | chr3.3:90628713-90628732 | MS.gene063179:intron | 20.0% |
!! | GTAAGAAAATTACAATGAAT+GGG | - | chr3.3:90627634-90627653 | None:intergenic | 20.0% |
!! | TAAGACATATGAAACATAAA+AGG | - | chr3.3:90626518-90626537 | None:intergenic | 20.0% |
!! | TAGACCATAAAAATGTTTAA+AGG | - | chr3.3:90628858-90628877 | None:intergenic | 20.0% |
!! | TGAAACATAAAAGGAATTAT+GGG | - | chr3.3:90626509-90626528 | None:intergenic | 20.0% |
!! | TGTAAGAAAATTACAATGAA+TGG | - | chr3.3:90627635-90627654 | None:intergenic | 20.0% |
!! | TTTAAGTAATTACTGTCAAT+TGG | + | chr3.3:90628242-90628261 | MS.gene063179:intron | 20.0% |
!!! | AACAATATTAAGAGCTTTTA+AGG | + | chr3.3:90627948-90627967 | MS.gene063179:intron | 20.0% |
!!! | AACATTAAAGTATTAACGTA+AGG | - | chr3.3:90627100-90627119 | None:intergenic | 20.0% |
!!! | AAGTTATAAAAGAAGCATTT+GGG | + | chr3.3:90625875-90625894 | MS.gene063179:intron | 20.0% |
!!! | AATTTTTGGATATAGAGTAA+TGG | - | chr3.3:90628541-90628560 | None:intergenic | 20.0% |
!!! | ACATTAAAGTATTAACGTAA+GGG | - | chr3.3:90627099-90627118 | None:intergenic | 20.0% |
!!! | ATATCCAAAAATTCATGTTT+TGG | + | chr3.3:90628548-90628567 | MS.gene063179:intron | 20.0% |
!!! | ATGATAATTTGCTTATTAGT+TGG | + | chr3.3:90628296-90628315 | MS.gene063179:intron | 20.0% |
!!! | ATGATATTAAATATGGCTTT+TGG | + | chr3.3:90626182-90626201 | MS.gene063179:intron | 20.0% |
!!! | ATTTCCAAAACATGAATTTT+TGG | - | chr3.3:90628555-90628574 | None:intergenic | 20.0% |
!!! | CATTCTTTTTAGGTAAATTT+AGG | + | chr3.3:90627696-90627715 | MS.gene063179:intron | 20.0% |
!!! | TAAGTTATAAAAGAAGCATT+TGG | + | chr3.3:90625874-90625893 | MS.gene063179:intron | 20.0% |
!!! | TAGGTATTTTTTGCTTATAA+TGG | + | chr3.3:90627150-90627169 | MS.gene063179:intron | 20.0% |
!!! | TCATGTTTTTACATGTTATA+AGG | + | chr3.3:90626691-90626710 | MS.gene063179:intron | 20.0% |
!!! | TCATTTGGTGAAATTTATAT+AGG | + | chr3.3:90625189-90625208 | MS.gene063179:intron | 20.0% |
!!! | TGAAAGTGTGTAAAAAATAA+AGG | - | chr3.3:90625708-90625727 | None:intergenic | 20.0% |
!!! | TGAACCTTTAAACATTTTTA+TGG | + | chr3.3:90628851-90628870 | MS.gene063179:intron | 20.0% |
!!! | TTCCTTGATGATATTAAATA+TGG | + | chr3.3:90626175-90626194 | MS.gene063179:intron | 20.0% |
! | AAAACTGCTACTATATTGAT+AGG | - | chr3.3:90626229-90626248 | None:intergenic | 25.0% |
! | AAGAAAGGTTAAATACTTAG+TGG | - | chr3.3:90628364-90628383 | None:intergenic | 25.0% |
! | AGAGAGAATAAAAGTTTAAC+AGG | + | chr3.3:90627411-90627430 | MS.gene063179:intron | 25.0% |
! | AGCATTTAGATTCTTTAGAT+TGG | - | chr3.3:90629573-90629592 | None:intergenic | 25.0% |
! | AGCCATATTTAATATCATCA+AGG | - | chr3.3:90626180-90626199 | None:intergenic | 25.0% |
! | AGTTTAACTAGTCAAGTTAA+TGG | + | chr3.3:90627356-90627375 | MS.gene063179:intron | 25.0% |
! | ATAAACTTCTTATTACATCG+GGG | - | chr3.3:90628712-90628731 | None:intergenic | 25.0% |
! | ATCAGGAAAGTTTAATAATC+GGG | - | chr3.3:90628919-90628938 | None:intergenic | 25.0% |
! | CACAAAATTTGCATAACTAA+AGG | - | chr3.3:90628393-90628412 | None:intergenic | 25.0% |
! | CATTGGATAACAGTTAATAA+AGG | + | chr3.3:90626874-90626893 | MS.gene063179:intron | 25.0% |
! | CCAAAATAGAATGAAATTTG+TGG | - | chr3.3:90627522-90627541 | None:intergenic | 25.0% |
! | GAGAGAATAAAAGTTTAACA+GGG | + | chr3.3:90627412-90627431 | MS.gene063179:intron | 25.0% |
! | GGAAATTAAAAACTAGATTG+AGG | - | chr3.3:90627874-90627893 | None:intergenic | 25.0% |
! | GTTAATACTTTAATGTTGTG+AGG | + | chr3.3:90627103-90627122 | MS.gene063179:intron | 25.0% |
! | TAAATTCTAACTCATTCTAC+TGG | - | chr3.3:90629183-90629202 | None:intergenic | 25.0% |
! | TACAAAATGTTGATCTCATT+AGG | - | chr3.3:90625468-90625487 | None:intergenic | 25.0% |
! | TCTAAATGCTAAGAATCATA+CGG | + | chr3.3:90629583-90629602 | MS.gene063179:CDS | 25.0% |
! | TCTAAATTCATTATCTTCAC+TGG | + | chr3.3:90626458-90626477 | MS.gene063179:intron | 25.0% |
! | TGTGTAAAAAATAAAGGTCA+TGG | - | chr3.3:90625702-90625721 | None:intergenic | 25.0% |
! | TTATCAAGGTCAAAACATTA+GGG | - | chr3.3:90627383-90627402 | None:intergenic | 25.0% |
! | TTCTATTCAACATTCATATG+CGG | + | chr3.3:90625253-90625272 | MS.gene063179:intron | 25.0% |
! | TTTAGATTCTTTAGATTGGA+TGG | - | chr3.3:90629569-90629588 | None:intergenic | 25.0% |
! | TTTATAACTTACTTTCTCCT+TGG | - | chr3.3:90625865-90625884 | None:intergenic | 25.0% |
! | TTTATCAAGGTCAAAACATT+AGG | - | chr3.3:90627384-90627403 | None:intergenic | 25.0% |
!! | AAAGAAACAAACCATTTTGA+CGG | - | chr3.3:90625337-90625356 | None:intergenic | 25.0% |
!! | AGATCATAATATTCTGGTTA+TGG | + | chr3.3:90626007-90626026 | MS.gene063179:CDS | 25.0% |
!! | ATCAATTGCACATTCTTTTT+AGG | + | chr3.3:90627686-90627705 | MS.gene063179:intron | 25.0% |
!! | ATCTCAAATAATTCCTTTTC+CGG | + | chr3.3:90627283-90627302 | MS.gene063179:intron | 25.0% |
!! | ATGAGATCAACATTTTGTAT+CGG | + | chr3.3:90625469-90625488 | MS.gene063179:intron | 25.0% |
!! | CCACAAATTTCATTCTATTT+TGG | + | chr3.3:90627519-90627538 | MS.gene063179:intron | 25.0% |
!! | TCTATTTACAAAAGTTCTAG+AGG | + | chr3.3:90626752-90626771 | MS.gene063179:intron | 25.0% |
!! | TTTTAATGCTCATTGCAAAA+CGG | + | chr3.3:90629211-90629230 | MS.gene063179:intron | 25.0% |
!!! | ATTATTTTTCACTTGGAAGT+TGG | + | chr3.3:90629339-90629358 | MS.gene063179:intron | 25.0% |
!!! | CTGCAATTTGTTACATTTAT+AGG | + | chr3.3:90626548-90626567 | MS.gene063179:intron | 25.0% |
!!! | GCTACATTTCTTTATTTTGT+AGG | + | chr3.3:90625781-90625800 | MS.gene063179:intron | 25.0% |
!!! | TATATTATTGATTTCGGACT+AGG | + | chr3.3:90626573-90626592 | MS.gene063179:CDS | 25.0% |
!!! | TGAATTATTGATTCCTGAAA+AGG | - | chr3.3:90629480-90629499 | None:intergenic | 25.0% |
!!! | TGCTTGCTTTATTTTTCAAT+TGG | + | chr3.3:90626143-90626162 | MS.gene063179:intron | 25.0% |
AAACCAGATAACTTCCTAAT+GGG | + | chr3.3:90626404-90626423 | MS.gene063179:CDS | 30.0% | |
AAATTATACAGTCTTCTCCA+AGG | + | chr3.3:90625845-90625864 | MS.gene063179:CDS | 30.0% | |
AACGAATTCTGTTCAATTGT+GGG | + | chr3.3:90629101-90629120 | MS.gene063179:intron | 30.0% | |
AACTAAAGGAGAAAGAAGAA+AGG | - | chr3.3:90628379-90628398 | None:intergenic | 30.0% | |
ACATAAAAGGAATTATGGGA+CGG | - | chr3.3:90626505-90626524 | None:intergenic | 30.0% | |
ACCATAATAAGTTTGGAAGT+AGG | + | chr3.3:90627131-90627150 | MS.gene063179:intron | 30.0% | |
ACCTACTTCCAAACTTATTA+TGG | - | chr3.3:90627135-90627154 | None:intergenic | 30.0% | |
ACTATGACAATTTATTCGAC+TGG | + | chr3.3:90628759-90628778 | MS.gene063179:CDS | 30.0% | |
AGATTACACAGATTACAAGT+TGG | - | chr3.3:90627267-90627286 | None:intergenic | 30.0% | |
ATGTACTAGTAACCAATCTT+AGG | + | chr3.3:90628639-90628658 | MS.gene063179:intron | 30.0% | |
ATTAAGACATGTACATCATC+AGG | - | chr3.3:90629455-90629474 | None:intergenic | 30.0% | |
ATTCTTCATTTGTGTTTGCT+TGG | + | chr3.3:90628594-90628613 | MS.gene063179:intron | 30.0% | |
ATTGAAAATGTATACCTCAG+TGG | - | chr3.3:90627827-90627846 | None:intergenic | 30.0% | |
ATTTGGATCTCATATGGAAA+AGG | + | chr3.3:90625901-90625920 | MS.gene063179:intron | 30.0% | |
CATGTCTTAGCAATTAATAG+AGG | - | chr3.3:90629677-90629696 | None:intergenic | 30.0% | |
CTAAATGCTAAGAATCATAC+GGG | + | chr3.3:90629584-90629603 | MS.gene063179:CDS | 30.0% | |
CTCTATTAATTGCTAAGACA+TGG | + | chr3.3:90629675-90629694 | MS.gene063179:intron | 30.0% | |
CTCTCTGTATAAGTTTATCA+AGG | - | chr3.3:90627397-90627416 | None:intergenic | 30.0% | |
CTTCTTATGTTCATACAATG+AGG | + | chr3.3:90629068-90629087 | MS.gene063179:intron | 30.0% | |
GAAGATAAATACAACACAAG+AGG | - | chr3.3:90628687-90628706 | None:intergenic | 30.0% | |
GAATAAAAGTTTAACAGGGA+CGG | + | chr3.3:90627416-90627435 | MS.gene063179:CDS | 30.0% | |
GCAATTAATAGAGGATATAG+AGG | - | chr3.3:90629668-90629687 | None:intergenic | 30.0% | |
GTGATGAATGATAAAGAGAT+GGG | - | chr3.3:90625371-90625390 | None:intergenic | 30.0% | |
TAAACTTATACTTGCTTGCT+AGG | + | chr3.3:90625670-90625689 | MS.gene063179:intron | 30.0% | |
TAAACTTCTTATTACATCGG+GGG | - | chr3.3:90628711-90628730 | None:intergenic | 30.0% | |
TATTAATTGCTAAGACATGG+TGG | + | chr3.3:90629678-90629697 | MS.gene063179:intron | 30.0% | |
TATTAGGAGAAAATCAAGTC+AGG | + | chr3.3:90626427-90626446 | MS.gene063179:CDS | 30.0% | |
TGATCTATTCCTTAGATTAC+CGG | - | chr3.3:90625439-90625458 | None:intergenic | 30.0% | |
TGATGGAGATCATAATATTC+TGG | + | chr3.3:90626001-90626020 | MS.gene063179:CDS | 30.0% | |
TGGTAAATATCTGTCAATCT+TGG | - | chr3.3:90629299-90629318 | None:intergenic | 30.0% | |
TGTACTAGTAACCAATCTTA+GGG | + | chr3.3:90628640-90628659 | MS.gene063179:intron | 30.0% | |
TGTGTGACATTAAAACAATC+TGG | - | chr3.3:90626793-90626812 | None:intergenic | 30.0% | |
TTACCAAAAACTTCTGTAAC+TGG | + | chr3.3:90626933-90626952 | MS.gene063179:intron | 30.0% | |
TTACTGTCAATTGGACATAT+AGG | + | chr3.3:90628251-90628270 | MS.gene063179:intron | 30.0% | |
TTATGTACTTCTTAAGAGGA+AGG | + | chr3.3:90627598-90627617 | MS.gene063179:CDS | 30.0% | |
TTGGAGAAGACTGTATAATT+TGG | - | chr3.3:90625846-90625865 | None:intergenic | 30.0% | |
TTTGATCAAGATCCAGATTA+TGG | + | chr3.3:90628147-90628166 | MS.gene063179:CDS | 30.0% | |
! | AAATTTAGGGCTTGACTATA+TGG | + | chr3.3:90627710-90627729 | MS.gene063179:intron | 30.0% |
! | AGCTTGATAACATGGAATTA+GGG | + | chr3.3:90625603-90625622 | MS.gene063179:intron | 30.0% |
! | ATAACTTCCTAATGGGTATT+AGG | + | chr3.3:90626411-90626430 | MS.gene063179:CDS | 30.0% |
! | ATGAATGTAGCTTGATAACA+TGG | + | chr3.3:90625595-90625614 | MS.gene063179:intron | 30.0% |
! | ATTTTCTCCTAATACCCATT+AGG | - | chr3.3:90626421-90626440 | None:intergenic | 30.0% |
! | CATGTCTTAATTTCCTTTTC+AGG | + | chr3.3:90629464-90629483 | MS.gene063179:intron | 30.0% |
! | CTTGTCATATTTTTCCTCTT+TGG | - | chr3.3:90627779-90627798 | None:intergenic | 30.0% |
! | GATCATTGCCTATTTTCTTA+TGG | + | chr3.3:90626959-90626978 | MS.gene063179:intron | 30.0% |
! | TAAAACAATCTGGTTTCATG+TGG | - | chr3.3:90626783-90626802 | None:intergenic | 30.0% |
! | TAGCTTGATAACATGGAATT+AGG | + | chr3.3:90625602-90625621 | MS.gene063179:intron | 30.0% |
! | TGAGATCAACATTTTGTATC+GGG | + | chr3.3:90625470-90625489 | MS.gene063179:intron | 30.0% |
! | TGCTTATAATGGAGTTTAGA+GGG | + | chr3.3:90627161-90627180 | MS.gene063179:intron | 30.0% |
! | TGTATAATTTGTGAATGCTC+CGG | + | chr3.3:90625417-90625436 | MS.gene063179:intron | 30.0% |
! | TTCCTCTTAAGAAGTACATA+AGG | - | chr3.3:90627599-90627618 | None:intergenic | 30.0% |
! | TTGCTTATAATGGAGTTTAG+AGG | + | chr3.3:90627160-90627179 | MS.gene063179:intron | 30.0% |
! | TTTAAGATTGGTCGCAAAAT+CGG | + | chr3.3:90625159-90625178 | MS.gene063179:CDS | 30.0% |
!! | AAGAAGCATTTGGGTATATT+TGG | + | chr3.3:90625884-90625903 | MS.gene063179:intron | 30.0% |
!! | AATAGTCATTGATTCAAGTG+AGG | - | chr3.3:90628953-90628972 | None:intergenic | 30.0% |
!! | ACATTTTCTGCAGTTGATTT+GGG | - | chr3.3:90629850-90629869 | None:intergenic | 30.0% |
!! | CTTTTAAGGATTGCTATTAC+TGG | + | chr3.3:90627962-90627981 | MS.gene063179:intron | 30.0% |
!!! | AGTTTTGTTACAGTAACTTG+AGG | - | chr3.3:90629503-90629522 | None:intergenic | 30.0% |
AAAAACTAGATTGAGGGTCA+GGG | - | chr3.3:90627867-90627886 | None:intergenic | 35.0% | |
AAAATGTCTCTAAGCCTGAA+AGG | + | chr3.3:90629863-90629882 | MS.gene063179:CDS | 35.0% | |
AAGGAGACAAAAGCAATCAT+CGG | + | chr3.3:90628814-90628833 | MS.gene063179:CDS | 35.0% | |
AATAGAGTACATGCATTCCA+AGG | + | chr3.3:90626361-90626380 | MS.gene063179:CDS | 35.0% | |
AATCCAGCTGCTTGAAATAT+GGG | - | chr3.3:90629932-90629951 | None:intergenic | 35.0% | |
ACATACTGCATACAGTACAT+AGG | + | chr3.3:90628434-90628453 | MS.gene063179:intron | 35.0% | |
AGTCTTTCTTAGTTGAACAG+CGG | - | chr3.3:90629390-90629409 | None:intergenic | 35.0% | |
AGTTTAAACCCTGATCATCA+AGG | + | chr3.3:90625548-90625567 | MS.gene063179:intron | 35.0% | |
ATACCCATTAGGAAGTTATC+TGG | - | chr3.3:90626410-90626429 | None:intergenic | 35.0% | |
ATAGAGTACATGCATTCCAA+GGG | + | chr3.3:90626362-90626381 | MS.gene063179:CDS | 35.0% | |
ATAGTTCCAGGTATTCATGT+AGG | - | chr3.3:90627922-90627941 | None:intergenic | 35.0% | |
ATCGAAAAGTTACCTCTTGT+AGG | + | chr3.3:90626251-90626270 | MS.gene063179:intron | 35.0% | |
ATTGTTTCGTCAATAGTTCC+AGG | - | chr3.3:90627934-90627953 | None:intergenic | 35.0% | |
CAAACCAGATAACTTCCTAA+TGG | + | chr3.3:90626403-90626422 | MS.gene063179:CDS | 35.0% | |
CAAGCAAGCATATTCCTTAT+AGG | + | chr3.3:90626619-90626638 | MS.gene063179:CDS | 35.0% | |
CAAGGATGCCATAAGAAAAT+AGG | - | chr3.3:90626970-90626989 | None:intergenic | 35.0% | |
CAATAGACTCCAAATCATCA+CGG | - | chr3.3:90627569-90627588 | None:intergenic | 35.0% | |
CATAAAAGGAATTATGGGAC+GGG | - | chr3.3:90626504-90626523 | None:intergenic | 35.0% | |
CGTGATGAATGATAAAGAGA+TGG | - | chr3.3:90625372-90625391 | None:intergenic | 35.0% | |
CTCAACAACTATTGTGTACA+AGG | + | chr3.3:90625738-90625757 | MS.gene063179:intron | 35.0% | |
CTCAACTGATTAGGGTTAAA+AGG | + | chr3.3:90625511-90625530 | MS.gene063179:intron | 35.0% | |
CTCATTGCAAAACGGAAAAA+AGG | + | chr3.3:90629219-90629238 | MS.gene063179:intron | 35.0% | |
CTTCAATGATAAAACCTCTC+AGG | - | chr3.3:90628016-90628035 | None:intergenic | 35.0% | |
GAACGAATTCTGTTCAATTG+TGG | + | chr3.3:90629100-90629119 | MS.gene063179:intron | 35.0% | |
GGAGATGACCATAATAAGTT+TGG | + | chr3.3:90627124-90627143 | MS.gene063179:intron | 35.0% | |
GGGTATATTTGGATCTCATA+TGG | + | chr3.3:90625895-90625914 | MS.gene063179:intron | 35.0% | |
GTCCTTATGTACTTCTTAAG+AGG | + | chr3.3:90627594-90627613 | MS.gene063179:CDS | 35.0% | |
GTCTCTATGTAAAAATCCCT+TGG | - | chr3.3:90626381-90626400 | None:intergenic | 35.0% | |
GTGAGGAAGAGAATAAAATC+AGG | - | chr3.3:90628936-90628955 | None:intergenic | 35.0% | |
GTGCTTAAGTAGAGATATTC+TGG | - | chr3.3:90628416-90628435 | None:intergenic | 35.0% | |
TAAAAACTAGATTGAGGGTC+AGG | - | chr3.3:90627868-90627887 | None:intergenic | 35.0% | |
TACAAGCTTAGCTGTAAAGA+AGG | - | chr3.3:90627497-90627516 | None:intergenic | 35.0% | |
TCATGTAGGTCAAAGTATGA+GGG | - | chr3.3:90627908-90627927 | None:intergenic | 35.0% | |
TGATGATCAGGGTTTAAACT+CGG | - | chr3.3:90625548-90625567 | None:intergenic | 35.0% | |
TGCAATACTCACTTAGGAAT+CGG | + | chr3.3:90627453-90627472 | MS.gene063179:CDS | 35.0% | |
TGCATTTACTGGAATGCATA+TGG | + | chr3.3:90628881-90628900 | MS.gene063179:intron | 35.0% | |
TGGATCTTGATCAAATGTCA+AGG | - | chr3.3:90628142-90628161 | None:intergenic | 35.0% | |
TTAGGGTTAAAAGGAGTTTG+AGG | + | chr3.3:90625520-90625539 | MS.gene063179:intron | 35.0% | |
TTATAACTGCACAGTAGTAC+TGG | - | chr3.3:90627000-90627019 | None:intergenic | 35.0% | |
TTCATGTAGGTCAAAGTATG+AGG | - | chr3.3:90627909-90627928 | None:intergenic | 35.0% | |
TTCTTTAGATTGGATGGCTT+AGG | - | chr3.3:90629563-90629582 | None:intergenic | 35.0% | |
TTTGGCTGAATTTAATGAGC+AGG | + | chr3.3:90628731-90628750 | MS.gene063179:intron | 35.0% | |
! | ACACCAGTTACAGAAGTTTT+TGG | - | chr3.3:90626939-90626958 | None:intergenic | 35.0% |
! | ACATTTTGTATCGGGTTTGA+TGG | + | chr3.3:90625478-90625497 | MS.gene063179:intron | 35.0% |
! | AGGAATATGCTTGCTTGTTT+TGG | - | chr3.3:90626616-90626635 | None:intergenic | 35.0% |
! | ATTCTGGTTATGGATCTTCT+GGG | + | chr3.3:90626017-90626036 | MS.gene063179:CDS | 35.0% |
! | CATTTTGTATCGGGTTTGAT+GGG | + | chr3.3:90625479-90625498 | MS.gene063179:intron | 35.0% |
! | CTTATAATGGAGTTTAGAGG+GGG | + | chr3.3:90627163-90627182 | MS.gene063179:intron | 35.0% |
! | CTTCTGAGAACAAGGAATAT+GGG | - | chr3.3:90628067-90628086 | None:intergenic | 35.0% |
! | GACATTTTCTGCAGTTGATT+TGG | - | chr3.3:90629851-90629870 | None:intergenic | 35.0% |
! | GCTTATAATGGAGTTTAGAG+GGG | + | chr3.3:90627162-90627181 | MS.gene063179:intron | 35.0% |
! | GTCAGGGGTTAATCATTTTA+TGG | - | chr3.3:90627851-90627870 | None:intergenic | 35.0% |
! | TATTCTGGTTATGGATCTTC+TGG | + | chr3.3:90626016-90626035 | MS.gene063179:CDS | 35.0% |
! | TGGAATTAGGGATGTGTTTT+TGG | + | chr3.3:90625615-90625634 | MS.gene063179:intron | 35.0% |
! | TTCTGATTCGTCTTACACTT+CGG | + | chr3.3:90625940-90625959 | MS.gene063179:intron | 35.0% |
!! | CGCTTTAAGAATCCATAATC+TGG | - | chr3.3:90628162-90628181 | None:intergenic | 35.0% |
!! | GGAATATGCTTGCTTGTTTT+GGG | - | chr3.3:90626615-90626634 | None:intergenic | 35.0% |
!! | TTTTGCATTTTAGCCTTCCT+TGG | + | chr3.3:90627734-90627753 | MS.gene063179:intron | 35.0% |
!!! | GAATATGCTTGCTTGTTTTG+GGG | - | chr3.3:90626614-90626633 | None:intergenic | 35.0% |
!!! | TGTTTTAGCCTGTTGAATGT+AGG | + | chr3.3:90628320-90628339 | MS.gene063179:intron | 35.0% |
AAAACTAGATTGAGGGTCAG+GGG | - | chr3.3:90627866-90627885 | None:intergenic | 40.0% | |
AAAATCGGAAGCGGTTCATT+TGG | + | chr3.3:90625174-90625193 | MS.gene063179:intron | 40.0% | |
AAAGTAAGACGCAAACTCCA+CGG | - | chr3.3:90628106-90628125 | None:intergenic | 40.0% | |
AATCAGAACTCAGAAGAGTC+CGG | - | chr3.3:90627305-90627324 | None:intergenic | 40.0% | |
AGAAGAAATCCAATGGCAGT+CGG | - | chr3.3:90629637-90629656 | None:intergenic | 40.0% | |
AGCTAGTACGAATCAGCATT+AGG | - | chr3.3:90625764-90625783 | None:intergenic | 40.0% | |
ATGAATCAGTGGTTACCATC+TGG | - | chr3.3:90626115-90626134 | None:intergenic | 40.0% | |
ATTCCAACTATGAGATGGTG+CGG | + | chr3.3:90625975-90625994 | MS.gene063179:CDS | 40.0% | |
CAAACCTAGGTCGTGTATTT+GGG | + | chr3.3:90629899-90629918 | MS.gene063179:CDS | 40.0% | |
CAATGATAAAACCTCTCAGG+AGG | - | chr3.3:90628013-90628032 | None:intergenic | 40.0% | |
CACATTTGGACGATCAAGAT+TGG | - | chr3.3:90629531-90629550 | None:intergenic | 40.0% | |
CTTTGACCTACATGAATACC+TGG | + | chr3.3:90627913-90627932 | MS.gene063179:intron | 40.0% | |
GAAGAAATTCGCCGTAAAGA+AGG | - | chr3.3:90629955-90629974 | None:intergenic | 40.0% | |
GAAGTTATCAACTTCCACTG+AGG | + | chr3.3:90627810-90627829 | MS.gene063179:CDS | 40.0% | |
GAATCCAGCTGCTTGAAATA+TGG | - | chr3.3:90629933-90629952 | None:intergenic | 40.0% | |
GCAAGTTGCAATACTCACTT+AGG | + | chr3.3:90627447-90627466 | MS.gene063179:CDS | 40.0% | |
GCAATCCAGATATGAATCAG+TGG | - | chr3.3:90626126-90626145 | None:intergenic | 40.0% | |
GCATCCACAACTATTGTATG+AGG | + | chr3.3:90625820-90625839 | MS.gene063179:CDS | 40.0% | |
GTGGTATTCCAACTATGAGA+TGG | + | chr3.3:90625970-90625989 | MS.gene063179:CDS | 40.0% | |
GTGGTTGTGGAAAAACATAC+AGG | + | chr3.3:90629035-90629054 | MS.gene063179:CDS | 40.0% | |
TAATGCCTCCTACATTCAAC+AGG | - | chr3.3:90628331-90628350 | None:intergenic | 40.0% | |
TAATTTCTTCCGACTGCCAT+TGG | + | chr3.3:90629625-90629644 | MS.gene063179:intron | 40.0% | |
TACTCTATTCTCGAAAGCTG+TGG | - | chr3.3:90626350-90626369 | None:intergenic | 40.0% | |
TATTCCCAAATACACGACCT+AGG | - | chr3.3:90629906-90629925 | None:intergenic | 40.0% | |
TCAAACCTAGGTCGTGTATT+TGG | + | chr3.3:90629898-90629917 | MS.gene063179:CDS | 40.0% | |
TGTAGGAGAAGAAGAGAACA+AGG | + | chr3.3:90625798-90625817 | MS.gene063179:intron | 40.0% | |
TTCACTTGGAAGTTGGAACT+TGG | + | chr3.3:90629346-90629365 | MS.gene063179:intron | 40.0% | |
TTGGCCTCATACAATAGTTG+TGG | - | chr3.3:90625827-90625846 | None:intergenic | 40.0% | |
TTGGGTAGCTCAACTGATTA+GGG | + | chr3.3:90625503-90625522 | MS.gene063179:intron | 40.0% | |
TTGTTCTCAAGACCACATGT+AGG | - | chr3.3:90628478-90628497 | None:intergenic | 40.0% | |
TTTAGCCTGTTGAATGTAGG+AGG | + | chr3.3:90628323-90628342 | MS.gene063179:intron | 40.0% | |
TTTGATGTTAGCAGACCAGA+TGG | + | chr3.3:90626097-90626116 | MS.gene063179:CDS | 40.0% | |
TTTGGGTAGCTCAACTGATT+AGG | + | chr3.3:90625502-90625521 | MS.gene063179:intron | 40.0% | |
! | AGTAGCTACCTTGATGATCA+GGG | - | chr3.3:90625559-90625578 | None:intergenic | 40.0% |
! | ATGGTCTAGCTTGCATTTAC+TGG | + | chr3.3:90628870-90628889 | MS.gene063179:intron | 40.0% |
! | CGTCTTACACTTCGGATTTT+AGG | + | chr3.3:90625948-90625967 | MS.gene063179:intron | 40.0% |
! | CGTGATGATTTGGAGTCTAT+TGG | + | chr3.3:90627567-90627586 | MS.gene063179:CDS | 40.0% |
! | CTTACACTTCGGATTTTAGG+TGG | + | chr3.3:90625951-90625970 | MS.gene063179:intron | 40.0% |
! | GCTTCTGAGAACAAGGAATA+TGG | - | chr3.3:90628068-90628087 | None:intergenic | 40.0% |
! | GTATGTTTTTCCACAACCAC+TGG | - | chr3.3:90629035-90629054 | None:intergenic | 40.0% |
! | GTTGCGTCTGCTGATATTTT+AGG | - | chr3.3:90628790-90628809 | None:intergenic | 40.0% |
! | GTTGGCGGAAAGTTTAAGAT+TGG | + | chr3.3:90625147-90625166 | MS.gene063179:CDS | 40.0% |
! | TAGGGTTTCAGAGTTGTTTC+TGG | + | chr3.3:90628658-90628677 | MS.gene063179:intron | 40.0% |
! | TAGTAGCTACCTTGATGATC+AGG | - | chr3.3:90625560-90625579 | None:intergenic | 40.0% |
! | TCGGACTAGGAAAAAGATAC+CGG | + | chr3.3:90626586-90626605 | MS.gene063179:CDS | 40.0% |
! | TTTGAGATGAGACCTACATG+TGG | + | chr3.3:90628463-90628482 | MS.gene063179:intron | 40.0% |
!! | AGTAGTACTGGTACACATCA+AGG | - | chr3.3:90626988-90627007 | None:intergenic | 40.0% |
!! | ATAGGAGCATTTCCTACAAG+AGG | - | chr3.3:90626266-90626285 | None:intergenic | 40.0% |
!! | CAACTCTGAAACCCTAAGAT+TGG | - | chr3.3:90628654-90628673 | None:intergenic | 40.0% |
!! | CGTCTGCTGATATTTTAGGA+TGG | - | chr3.3:90628786-90628805 | None:intergenic | 40.0% |
!! | GGTAACCACTGATTCATATC+TGG | + | chr3.3:90626118-90626137 | MS.gene063179:intron | 40.0% |
!!! | AGAGGGGGTATTTTGTGAAA+TGG | + | chr3.3:90627178-90627197 | MS.gene063179:intron | 40.0% |
AACTCAGAAGAGTCCGGAAA+AGG | - | chr3.3:90627299-90627318 | None:intergenic | 45.0% | |
AAGTAAGACGCAAACTCCAC+GGG | - | chr3.3:90628105-90628124 | None:intergenic | 45.0% | |
ACTAGGAACAGCACTAGGTA+CGG | - | chr3.3:90628991-90629010 | None:intergenic | 45.0% | |
ACTCCCATATTTCAAGCAGC+TGG | + | chr3.3:90629926-90629945 | MS.gene063179:CDS | 45.0% | |
AGGAAATGCTCCTATCCACA+GGG | + | chr3.3:90626271-90626290 | MS.gene063179:intron | 45.0% | |
AGTATGAGGGCGAGAAGAAA+AGG | - | chr3.3:90627895-90627914 | None:intergenic | 45.0% | |
ATAAAACCTCTCAGGAGGAG+GGG | - | chr3.3:90628008-90628027 | None:intergenic | 45.0% | |
ATTGGTCGCAAAATCGGAAG+CGG | + | chr3.3:90625165-90625184 | MS.gene063179:CDS | 45.0% | |
CAATGATCCGTCCACTTCAT+CGG | + | chr3.3:90629819-90629838 | MS.gene063179:CDS | 45.0% | |
CATTGAAAGTCCCTGTGGAT+AGG | - | chr3.3:90626284-90626303 | None:intergenic | 45.0% | |
GATAAAACCTCTCAGGAGGA+GGG | - | chr3.3:90628009-90628028 | None:intergenic | 45.0% | |
GCAGCTGGATTCCTTCTTTA+CGG | + | chr3.3:90629941-90629960 | MS.gene063179:CDS | 45.0% | |
GCTTTCATTGAAAGTCCCTG+TGG | - | chr3.3:90626289-90626308 | None:intergenic | 45.0% | |
GTGAATGCTCCGGTAATCTA+AGG | + | chr3.3:90625427-90625446 | MS.gene063179:intron | 45.0% | |
TAGGAAATGCTCCTATCCAC+AGG | + | chr3.3:90626270-90626289 | MS.gene063179:intron | 45.0% | |
TCTGAAAGCTGTCACCAAAG+AGG | + | chr3.3:90627762-90627781 | MS.gene063179:CDS | 45.0% | |
TGATAAAACCTCTCAGGAGG+AGG | - | chr3.3:90628010-90628029 | None:intergenic | 45.0% | |
! | ACCTAGGTTTGAAGTTCCTG+TGG | - | chr3.3:90629890-90629909 | None:intergenic | 45.0% |
! | AGGACCTTTTTGTCTTCTGC+GGG | + | chr3.3:90626051-90626070 | MS.gene063179:CDS | 45.0% |
! | CCTAGGTTTGAAGTTCCTGT+GGG | - | chr3.3:90629889-90629908 | None:intergenic | 45.0% |
! | CGGACTAGGAAAAAGATACC+GGG | + | chr3.3:90626587-90626606 | MS.gene063179:CDS | 45.0% |
! | GAGGACCTTTTTGTCTTCTG+CGG | + | chr3.3:90626050-90626069 | MS.gene063179:CDS | 45.0% |
! | GATGGACTCAAAGTGTCTAC+TGG | + | chr3.3:90627041-90627060 | MS.gene063179:intron | 45.0% |
! | GCTTTTTGCAGCCTCTGATA+TGG | + | chr3.3:90625293-90625312 | MS.gene063179:intron | 45.0% |
! | TCGCAAAGCTTCTGAGAACA+AGG | - | chr3.3:90628075-90628094 | None:intergenic | 45.0% |
!! | CATTTTAGCCTTCCTTGGCA+GGG | + | chr3.3:90627739-90627758 | MS.gene063179:intron | 45.0% |
!! | GTATCGGGTTTGATGGGTTT+GGG | + | chr3.3:90625485-90625504 | MS.gene063179:intron | 45.0% |
!! | TGTATCGGGTTTGATGGGTT+TGG | + | chr3.3:90625484-90625503 | MS.gene063179:intron | 45.0% |
ACAGCACTAGGAACAGCACT+AGG | - | chr3.3:90628996-90629015 | None:intergenic | 50.0% | |
ATCAGCAGACGCAACAGACA+AGG | + | chr3.3:90628795-90628814 | MS.gene063179:CDS | 50.0% | |
CAGTCTACAACCAGTGGTTG+TGG | + | chr3.3:90629022-90629041 | MS.gene063179:CDS | 50.0% | |
CCCACAGGAACTTCAAACCT+AGG | + | chr3.3:90629886-90629905 | MS.gene063179:CDS | 50.0% | |
CGTGAGTTGTTCACTCGTGA+AGG | + | chr3.3:90628189-90628208 | MS.gene063179:CDS | 50.0% | |
CTCTGATATGGACACCTCTG+AGG | + | chr3.3:90625305-90625324 | MS.gene063179:CDS | 50.0% | |
GCAAAGTCGCCGTGATGATT+TGG | + | chr3.3:90627557-90627576 | MS.gene063179:CDS | 50.0% | |
GCTTTGCGAATCATATCCCG+TGG | + | chr3.3:90628086-90628105 | MS.gene063179:CDS | 50.0% | |
GTACCGCACCATCTCATAGT+TGG | - | chr3.3:90625981-90626000 | None:intergenic | 50.0% | |
TGAGGTCGTTGCCGTCAAAA+TGG | + | chr3.3:90625323-90625342 | MS.gene063179:CDS | 50.0% | |
TGCTCCCGCAGAAGACAAAA+AGG | - | chr3.3:90626058-90626077 | None:intergenic | 50.0% | |
TTAGGCTGCACACGCACATT+TGG | - | chr3.3:90629545-90629564 | None:intergenic | 50.0% | |
TTTGGGCAAAGCCGATGAAG+TGG | - | chr3.3:90629833-90629852 | None:intergenic | 50.0% | |
! | ACCACTGGTTGTAGACTGCT+AGG | - | chr3.3:90629020-90629039 | None:intergenic | 50.0% |
! | ATGAGATGGTGCGGTACTGA+TGG | + | chr3.3:90625984-90626003 | MS.gene063179:CDS | 50.0% |
!! | CTCAGAGGTGTCCATATCAG+AGG | - | chr3.3:90625307-90625326 | None:intergenic | 50.0% |
!! | GCATTTTAGCCTTCCTTGGC+AGG | + | chr3.3:90627738-90627757 | MS.gene063179:intron | 50.0% |
ACAGCTTTCAGACCCTGCCA+AGG | - | chr3.3:90627754-90627773 | None:intergenic | 55.0% | |
AGACTGCTAGGCACAGCACT+AGG | - | chr3.3:90629008-90629027 | None:intergenic | 55.0% | |
CTTTCAGACCCTGCCAAGGA+AGG | - | chr3.3:90627750-90627769 | None:intergenic | 55.0% | |
GAAGTTCCTGTGGGCCTTTC+AGG | - | chr3.3:90629880-90629899 | None:intergenic | 55.0% | |
GCACTAGGTACGGCATCTGA+AGG | - | chr3.3:90628981-90629000 | None:intergenic | 55.0% | |
GCCTAGCAGTCTACAACCAG+TGG | + | chr3.3:90629016-90629035 | MS.gene063179:CDS | 55.0% | |
GGCAAAGCCGATGAAGTGGA+CGG | - | chr3.3:90629829-90629848 | None:intergenic | 55.0% | |
TCTAAGCCTGAAAGGCCCAC+AGG | + | chr3.3:90629871-90629890 | MS.gene063179:CDS | 55.0% | |
TTTGACGGCAACGACCTCAG+AGG | - | chr3.3:90625322-90625341 | None:intergenic | 55.0% | |
!! | GGATCTTCTGGGACGTAGTC+TGG | + | chr3.3:90626028-90626047 | MS.gene063179:CDS | 55.0% |
!! | TCTTCTGGGACGTAGTCTGG+AGG | + | chr3.3:90626031-90626050 | MS.gene063179:CDS | 55.0% |
!!! | GCTTGCTTGTTTTGGGGTCC+CGG | - | chr3.3:90626608-90626627 | None:intergenic | 55.0% |
AGTTAGCCCCTCCTCCTGAG+AGG | + | chr3.3:90627999-90628018 | MS.gene063179:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 90625135 | 90629984 | 90625135 | ID=MS.gene063179 |
chr3.3 | mRNA | 90625135 | 90629984 | 90625135 | ID=MS.gene063179.t1;Parent=MS.gene063179 |
chr3.3 | exon | 90625135 | 90625186 | 90625135 | ID=MS.gene063179.t1.exon1;Parent=MS.gene063179.t1 |
chr3.3 | CDS | 90625135 | 90625186 | 90625135 | ID=cds.MS.gene063179.t1;Parent=MS.gene063179.t1 |
chr3.3 | exon | 90625304 | 90625344 | 90625304 | ID=MS.gene063179.t1.exon2;Parent=MS.gene063179.t1 |
chr3.3 | CDS | 90625304 | 90625344 | 90625304 | ID=cds.MS.gene063179.t1;Parent=MS.gene063179.t1 |
chr3.3 | exon | 90625803 | 90625872 | 90625803 | ID=MS.gene063179.t1.exon3;Parent=MS.gene063179.t1 |
chr3.3 | CDS | 90625803 | 90625872 | 90625803 | ID=cds.MS.gene063179.t1;Parent=MS.gene063179.t1 |
chr3.3 | exon | 90625970 | 90626118 | 90625970 | ID=MS.gene063179.t1.exon4;Parent=MS.gene063179.t1 |
chr3.3 | CDS | 90625970 | 90626118 | 90625970 | ID=cds.MS.gene063179.t1;Parent=MS.gene063179.t1 |
chr3.3 | exon | 90626353 | 90626448 | 90626353 | ID=MS.gene063179.t1.exon5;Parent=MS.gene063179.t1 |
chr3.3 | CDS | 90626353 | 90626448 | 90626353 | ID=cds.MS.gene063179.t1;Parent=MS.gene063179.t1 |
chr3.3 | exon | 90626570 | 90626640 | 90626570 | ID=MS.gene063179.t1.exon6;Parent=MS.gene063179.t1 |
chr3.3 | CDS | 90626570 | 90626640 | 90626570 | ID=cds.MS.gene063179.t1;Parent=MS.gene063179.t1 |
chr3.3 | exon | 90627413 | 90627474 | 90627413 | ID=MS.gene063179.t1.exon7;Parent=MS.gene063179.t1 |
chr3.3 | CDS | 90627413 | 90627474 | 90627413 | ID=cds.MS.gene063179.t1;Parent=MS.gene063179.t1 |
chr3.3 | exon | 90627556 | 90627619 | 90627556 | ID=MS.gene063179.t1.exon8;Parent=MS.gene063179.t1 |
chr3.3 | CDS | 90627556 | 90627619 | 90627556 | ID=cds.MS.gene063179.t1;Parent=MS.gene063179.t1 |
chr3.3 | exon | 90627747 | 90627831 | 90627747 | ID=MS.gene063179.t1.exon9;Parent=MS.gene063179.t1 |
chr3.3 | CDS | 90627747 | 90627831 | 90627747 | ID=cds.MS.gene063179.t1;Parent=MS.gene063179.t1 |
chr3.3 | exon | 90628084 | 90628210 | 90628084 | ID=MS.gene063179.t1.exon10;Parent=MS.gene063179.t1 |
chr3.3 | CDS | 90628084 | 90628210 | 90628084 | ID=cds.MS.gene063179.t1;Parent=MS.gene063179.t1 |
chr3.3 | exon | 90628753 | 90628835 | 90628753 | ID=MS.gene063179.t1.exon11;Parent=MS.gene063179.t1 |
chr3.3 | CDS | 90628753 | 90628835 | 90628753 | ID=cds.MS.gene063179.t1;Parent=MS.gene063179.t1 |
chr3.3 | exon | 90628978 | 90629056 | 90628978 | ID=MS.gene063179.t1.exon12;Parent=MS.gene063179.t1 |
chr3.3 | CDS | 90628978 | 90629056 | 90628978 | ID=cds.MS.gene063179.t1;Parent=MS.gene063179.t1 |
chr3.3 | exon | 90629486 | 90629613 | 90629486 | ID=MS.gene063179.t1.exon13;Parent=MS.gene063179.t1 |
chr3.3 | CDS | 90629486 | 90629613 | 90629486 | ID=cds.MS.gene063179.t1;Parent=MS.gene063179.t1 |
chr3.3 | exon | 90629811 | 90629984 | 90629811 | ID=MS.gene063179.t1.exon14;Parent=MS.gene063179.t1 |
chr3.3 | CDS | 90629811 | 90629984 | 90629811 | ID=cds.MS.gene063179.t1;Parent=MS.gene063179.t1 |
Gene Sequence |
Protein sequence |