AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene06335

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06335.t1 MTR_3g097260 97.042 710 13 4 1 707 1 705 0.0 1407
MS.gene06335.t1 MTR_8g095170 74.332 674 142 11 39 707 20 667 0.0 981
MS.gene06335.t1 MTR_5g459450 65.473 698 197 8 41 706 47 732 0.0 910
MS.gene06335.t1 MTR_3g073100 62.672 726 211 12 28 707 21 732 0.0 882
MS.gene06335.t1 MTR_8g095170 74.028 566 130 8 39 600 20 572 0.0 833
MS.gene06335.t1 MTR_1g050740 50.683 732 281 13 48 706 56 780 0.0 696
MS.gene06335.t1 MTR_8g039100 53.305 711 272 10 48 706 48 750 0.0 696
MS.gene06335.t1 MTR_7g089950 49.027 771 291 13 11 706 48 791 0.0 685
MS.gene06335.t1 MTR_3g014650 51.397 716 265 12 48 706 84 773 0.0 669
MS.gene06335.t1 MTR_1g062740 41.272 802 291 14 49 703 47 815 0.0 558
MS.gene06335.t1 MTR_8g088930 37.662 770 354 18 49 705 9 765 1.95e-155 469
MS.gene06335.t1 MTR_8g088930 40.449 89 53 0 139 227 7 95 1.84e-13 74.3
MS.gene06335.t1 MTR_8g088930 37.451 769 356 17 49 705 9 764 2.91e-155 468
MS.gene06335.t1 MTR_8g088930 40.449 89 53 0 139 227 7 95 1.84e-13 74.3
MS.gene06335.t1 MTR_8g088930 40.034 587 282 12 49 569 9 591 4.30e-131 403
MS.gene06335.t1 MTR_8g088930 40.449 89 53 0 139 227 7 95 3.58e-13 73.6
MS.gene06335.t1 MTR_8g088930 40.034 587 282 12 49 569 9 591 4.38e-131 403
MS.gene06335.t1 MTR_8g088930 40.449 89 53 0 139 227 7 95 3.56e-13 73.6
MS.gene06335.t1 MTR_3g005910 79.167 72 15 0 431 502 1 72 2.34e-33 122
MS.gene06335.t1 MTR_8g080860 40.000 175 105 0 49 223 16 190 1.92e-32 127
MS.gene06335.t1 MTR_8g080860 36.478 159 101 0 53 211 112 270 8.61e-22 96.7
MS.gene06335.t1 MTR_8g080860 38.406 138 85 0 52 189 134 271 7.04e-21 94.0
MS.gene06335.t1 MTR_8g080860 33.918 171 113 0 53 223 89 259 2.61e-20 92.4
MS.gene06335.t1 MTR_8g080860 40.000 175 105 0 49 223 12 186 2.86e-32 127
MS.gene06335.t1 MTR_8g080860 36.478 159 101 0 53 211 108 266 1.31e-21 95.9
MS.gene06335.t1 MTR_8g080860 38.406 138 85 0 52 189 130 267 9.92e-21 93.6
MS.gene06335.t1 MTR_8g080860 33.918 171 113 0 53 223 85 255 4.04e-20 91.7
MS.gene06335.t1 MTR_6g043150 37.989 179 111 0 45 223 2 180 2.02e-30 122
MS.gene06335.t1 MTR_6g043150 36.269 193 115 2 53 245 79 263 8.26e-28 115
MS.gene06335.t1 MTR_6g043150 36.842 171 108 0 53 223 148 318 4.31e-24 104
MS.gene06335.t1 MTR_4g107460 40.782 179 105 1 49 226 5 183 3.36e-29 119
MS.gene06335.t1 MTR_4g107460 38.012 171 106 0 53 223 56 226 4.34e-29 119
MS.gene06335.t1 MTR_8g007500 35.052 194 123 1 35 225 176 369 6.04e-28 118
MS.gene06335.t1 MTR_8g007500 36.719 128 81 0 55 182 245 372 4.82e-18 87.8
MS.gene06335.t1 MTR_8g007500 34.906 106 69 0 55 160 268 373 8.12e-14 74.7
MS.gene06335.t1 MTR_5g010840 33.333 195 115 1 44 223 103 297 1.55e-27 115
MS.gene06335.t1 MTR_5g010840 33.526 173 107 1 54 226 182 346 2.59e-24 106
MS.gene06335.t1 MTR_5g010840 38.384 99 61 0 54 152 266 364 6.83e-15 77.8
MS.gene06335.t1 MTR_7g451440 33.684 190 126 0 36 225 175 364 1.90e-27 116
MS.gene06335.t1 MTR_7g451440 38.281 128 79 0 55 182 240 367 2.30e-18 89.0
MS.gene06335.t1 MTR_7g451440 36.220 127 81 0 100 226 193 319 3.54e-16 82.0
MS.gene06335.t1 MTR_7g451440 34.906 106 69 0 55 160 263 368 7.02e-13 71.6
MS.gene06335.t1 MTR_8g092090 39.264 163 99 0 60 222 47 209 3.02e-27 111
MS.gene06335.t1 MTR_8g092090 33.149 181 106 1 53 233 9 174 4.02e-21 93.6
MS.gene06335.t1 MTR_8g092090 36.054 147 94 0 53 199 86 232 1.24e-18 86.3
MS.gene06335.t1 MTR_2g078470 35.673 171 110 0 53 223 79 249 3.71e-27 114
MS.gene06335.t1 MTR_2g078470 40.000 175 105 0 49 223 6 180 1.98e-26 112
MS.gene06335.t1 MTR_2g078470 34.503 171 112 0 53 223 148 318 6.77e-25 107
MS.gene06335.t1 MTR_2g078470 37.931 145 90 0 52 196 216 360 1.52e-21 97.8
MS.gene06335.t1 MTR_2g078470 33.728 169 112 0 54 222 195 363 2.41e-20 94.0
MS.gene06335.t1 MTR_2g078470 33.628 113 75 0 52 164 262 374 7.96e-11 65.1
MS.gene06335.t1 MTR_4g099180 36.047 172 110 0 54 225 173 344 5.92e-27 114
MS.gene06335.t1 MTR_4g099180 35.938 128 82 0 55 182 220 347 4.84e-15 78.6
MS.gene06335.t1 MTR_4g099180 34.109 129 85 0 98 226 171 299 1.92e-14 76.6
MS.gene06335.t1 MTR_4g099180 33.962 106 70 0 55 160 243 348 1.18e-11 67.8
MS.gene06335.t1 MTR_8g080340 40.426 141 83 1 49 189 16 155 6.06e-27 108
MS.gene06335.t1 MTR_8g080340 38.614 101 62 0 126 226 23 123 5.04e-15 73.9
MS.gene06335.t1 MTR_8g095240 37.000 200 93 3 57 223 8 207 1.92e-26 113
MS.gene06335.t1 MTR_8g095240 33.516 182 110 2 52 222 118 299 6.03e-18 87.4
MS.gene06335.t1 MTR_8g095240 32.500 160 107 1 55 213 177 336 1.94e-12 70.1
MS.gene06335.t1 MTR_5g058920 36.471 170 108 0 54 223 198 367 4.36e-25 109
MS.gene06335.t1 MTR_5g058920 38.281 128 79 0 55 182 245 372 8.12e-17 84.0
MS.gene06335.t1 MTR_3g072650 31.771 192 123 1 40 223 164 355 4.40e-23 102
MS.gene06335.t1 MTR_3g072650 36.719 128 81 0 55 182 233 360 5.06e-16 81.3
MS.gene06335.t1 MTR_3g072650 32.558 129 87 0 98 226 184 312 1.61e-13 73.6
MS.gene06335.t1 MTR_3g072650 31.771 192 123 1 40 223 164 355 4.81e-23 102
MS.gene06335.t1 MTR_3g072650 36.719 128 81 0 55 182 233 360 5.16e-16 81.6
MS.gene06335.t1 MTR_3g072650 32.558 129 87 0 98 226 184 312 1.68e-13 73.6
MS.gene06335.t1 MTR_8g080350 29.302 215 114 3 52 228 125 339 4.58e-18 87.4
MS.gene06335.t1 MTR_8g080350 27.136 199 144 1 53 250 103 301 7.96e-18 86.7
MS.gene06335.t1 MTR_8g080350 32.919 161 96 3 53 211 195 345 5.34e-16 81.3
MS.gene06335.t1 MTR_8g080310 37.121 132 83 0 92 223 3 134 5.54e-18 82.0
MS.gene06335.t1 MTR_8g080310 36.242 149 95 0 75 223 9 157 1.12e-17 81.3
MS.gene06335.t1 MTR_8g080310 34.028 144 95 0 57 200 14 157 7.26e-14 70.1
MS.gene06335.t1 MTR_1g112280 28.646 192 112 3 14 204 574 741 4.23e-14 76.6
MS.gene06335.t1 MTR_3g023310 36.000 125 67 1 68 192 11 122 4.72e-14 71.2
MS.gene06335.t1 MTR_3g023310 34.426 122 67 1 92 213 12 120 1.07e-11 64.3
MS.gene06335.t1 MTR_3g023310 36.735 98 52 1 136 223 10 107 1.33e-11 64.3
MS.gene06335.t1 MTR_4g099180 35.156 128 81 2 74 200 170 296 3.12e-13 71.6
MS.gene06335.t1 MTR_4g099180 35.043 117 76 0 98 214 171 287 4.58e-13 71.2
MS.gene06335.t1 MTR_4g099180 33.913 115 76 0 54 168 173 287 1.60e-12 69.3
MS.gene06335.t1 MTR_4g099180 35.043 117 76 0 98 214 171 287 8.68e-13 70.5
MS.gene06335.t1 MTR_4g099180 37.719 114 69 2 74 186 170 282 1.06e-12 70.1
MS.gene06335.t1 MTR_4g099180 33.913 115 76 0 54 168 173 287 3.72e-12 68.6
MS.gene06335.t1 MTR_8g092410 36.207 116 69 3 112 223 146 260 4.95e-12 68.6
MS.gene06335.t1 MTR_8g092410 31.757 148 96 3 80 222 135 282 3.95e-11 65.9
MS.gene06335.t1 MTR_4g085090 30.120 166 96 6 416 566 1495 1655 7.32e-12 69.7
MS.gene06335.t1 MTR_4g124590 30.539 167 94 8 416 566 1553 1713 3.66e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06335.t1 AT1G21980 63.941 746 216 11 4 706 16 751 0.0 948
MS.gene06335.t1 AT1G77740 66.809 705 185 8 40 706 60 753 0.0 944
MS.gene06335.t1 AT1G77740 66.809 705 185 8 40 706 60 753 0.0 944
MS.gene06335.t1 AT2G26420 59.508 731 246 9 1 707 1 705 0.0 850
MS.gene06335.t1 AT2G26420 58.943 738 253 9 1 707 1 719 0.0 848
MS.gene06335.t1 AT2G26420 58.943 738 253 9 1 707 1 719 0.0 848
MS.gene06335.t1 AT3G07960 52.841 704 276 11 48 706 22 714 0.0 715
MS.gene06335.t1 AT2G41210 48.840 733 275 13 48 706 65 771 0.0 679
MS.gene06335.t1 AT3G56960 49.384 731 279 17 48 706 67 778 0.0 666
MS.gene06335.t1 AT3G56960 49.384 731 279 17 48 706 67 778 0.0 666
MS.gene06335.t1 AT3G07960 52.284 591 240 8 48 600 22 608 0.0 598
MS.gene06335.t1 AT3G07960 54.189 561 219 7 48 570 22 582 0.0 597
MS.gene06335.t1 AT3G07960 54.189 561 219 7 48 570 22 582 0.0 597
MS.gene06335.t1 AT3G09920 41.538 780 318 18 49 706 49 812 0.0 538
MS.gene06335.t1 AT3G09920 41.538 780 318 18 49 706 49 812 0.0 538
MS.gene06335.t1 AT3G09920 41.538 780 318 18 49 706 49 812 0.0 538
MS.gene06335.t1 AT3G09920 41.538 780 318 18 49 706 49 812 0.0 538
MS.gene06335.t1 AT1G10900 40.731 766 329 16 49 707 7 754 0.0 534
MS.gene06335.t1 AT1G10900 40.476 84 50 0 140 223 6 89 2.30e-11 67.8
MS.gene06335.t1 AT1G10900 40.731 766 329 16 49 707 7 754 0.0 534
MS.gene06335.t1 AT1G10900 40.476 84 50 0 140 223 6 89 2.30e-11 67.8
MS.gene06335.t1 AT1G10900 40.731 766 329 16 49 707 7 754 0.0 534
MS.gene06335.t1 AT1G10900 40.476 84 50 0 140 223 6 89 2.30e-11 67.8
MS.gene06335.t1 AT1G60890 47.477 436 173 6 316 705 342 767 2.73e-127 396
MS.gene06335.t1 AT1G60890 48.454 194 100 0 47 240 5 198 1.57e-54 200
MS.gene06335.t1 AT1G60890 47.477 436 173 6 316 705 354 779 3.26e-127 396
MS.gene06335.t1 AT1G60890 48.485 198 102 0 43 240 13 210 3.82e-55 202
MS.gene06335.t1 AT4G01190 38.346 399 175 10 358 704 12 391 9.36e-78 255
MS.gene06335.t1 AT4G01190 38.346 399 175 10 358 704 22 401 1.30e-77 255
MS.gene06335.t1 AT4G01190 38.346 399 175 10 358 704 22 401 1.30e-77 255
MS.gene06335.t1 AT1G01460 45.175 228 122 2 342 569 4 228 1.80e-61 212
MS.gene06335.t1 AT1G01460 48.454 97 44 2 612 707 332 423 7.74e-18 87.0
MS.gene06335.t1 AT1G21920 31.390 223 150 2 1 223 125 344 7.80e-27 113
MS.gene06335.t1 AT1G21920 37.209 129 81 0 55 183 222 350 7.69e-16 80.5
MS.gene06335.t1 AT1G21920 34.109 129 85 0 98 226 173 301 3.52e-12 69.3
MS.gene06335.t1 AT1G77660 29.596 223 157 0 1 223 126 348 8.77e-27 114
MS.gene06335.t1 AT1G77660 35.659 129 83 0 55 183 226 354 2.58e-15 79.3
MS.gene06335.t1 AT1G77660 33.333 129 86 0 98 226 177 305 1.76e-14 76.6
MS.gene06335.t1 AT1G21920 31.390 223 150 2 1 223 125 344 1.41e-26 113
MS.gene06335.t1 AT1G21920 37.209 129 81 0 55 183 222 350 7.92e-16 80.9
MS.gene06335.t1 AT1G21920 34.109 129 85 0 98 226 173 301 3.49e-12 69.3
MS.gene06335.t1 AT4G17080 34.118 170 112 0 54 223 258 427 7.60e-26 112
MS.gene06335.t1 AT4G17080 36.719 128 81 0 55 182 305 432 2.60e-18 89.4
MS.gene06335.t1 AT4G17080 32.738 168 107 2 59 226 223 384 3.47e-16 82.4
MS.gene06335.t1 AT2G35170 32.821 195 128 2 29 223 205 396 5.15e-25 109
MS.gene06335.t1 AT2G35170 36.719 128 81 0 55 182 274 401 8.25e-19 90.5
MS.gene06335.t1 AT2G35170 34.146 123 81 0 104 226 231 353 1.44e-14 77.4
MS.gene06335.t1 AT1G75010 29.375 160 88 3 46 204 595 730 3.37e-12 70.5
MS.gene06335.t1 AT1G71010 30.120 166 96 7 416 566 1417 1577 9.81e-12 69.3

Find 204 sgRNAs with CRISPR-Local

Find 352 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAATCTTCAATTGGGTATT+AGG 0.146414 3.1:-77595452 MS.gene06335:intron
TCTGATGTAATCCTTTATTT+TGG 0.181773 3.1:-77592835 MS.gene06335:CDS
CTTGGTTTCAAGAGCTAAAA+TGG 0.216088 3.1:-77594333 MS.gene06335:intron
TATGAAATCCCTAAACCTTT+TGG 0.258022 3.1:+77592702 None:intergenic
AGAAACATGTTGATAGTAAC+TGG 0.261885 3.1:+77594693 None:intergenic
TTGATCCAAAGGAGAAATTC+TGG 0.268700 3.1:-77595273 MS.gene06335:CDS
GCTATATTCCAAAAGGTTTA+GGG 0.268928 3.1:-77592710 MS.gene06335:CDS
CCATTATTCCCTCTGCTTCC+AGG 0.269835 3.1:+77594194 None:intergenic
AGCTATATTCCAAAAGGTTT+AGG 0.285097 3.1:-77592711 MS.gene06335:CDS
GGTGTTGGTGTTGGTGATGT+AGG 0.285814 3.1:-77595576 MS.gene06335:CDS
AGAAACATTATTAACTATTT+CGG 0.287516 3.1:-77596417 MS.gene06335:CDS
GGAGTGTTTCATCAGGGAAT+TGG 0.303949 3.1:-77595776 MS.gene06335:CDS
GTGATACTTATAAAGGTTCT+TGG 0.319831 3.1:-77596052 MS.gene06335:CDS
CTTGTCCAGAATTTCTCCTT+TGG 0.321711 3.1:+77595268 None:intergenic
CACACTCTCTCCGCTCTTGC+TGG 0.322769 3.1:+77592928 None:intergenic
GAGTGTTTCATCAGGGAATT+GGG 0.334465 3.1:-77595775 MS.gene06335:CDS
CAGACCCGATTTATTGTAAT+GGG 0.335217 3.1:-77594508 MS.gene06335:CDS
TGATAGAGACTGTGAGTTCC+TGG 0.341577 3.1:-77594212 MS.gene06335:CDS
ACTACTGTCCCGTGGTGTTC+AGG 0.341724 3.1:-77595183 MS.gene06335:intron
GGCGTAAACTTGGAACCTTC+TGG 0.344560 3.1:+77595238 None:intergenic
CATTGCCCATTACAATAAAT+CGG 0.346280 3.1:+77594503 None:intergenic
ACTCACAGAAACCCTCTTCT+TGG 0.347045 3.1:+77595743 None:intergenic
AATATCCTTACGGAGTTTAT+CGG 0.347395 3.1:+77594414 None:intergenic
TTTGATTCTTAATCTTCAAT+TGG 0.355941 3.1:-77595460 MS.gene06335:CDS
TCAGGGGCCATGGAAGGTTC+TGG 0.355954 3.1:-77596095 MS.gene06335:CDS
GTTCATTGTGTCAAACCTAT+TGG 0.370452 3.1:-77594634 MS.gene06335:CDS
TGTCAATGATGCCAAAATAA+AGG 0.379878 3.1:+77592824 None:intergenic
TACCTTTCTTCCATTCTCCT+TGG 0.380033 3.1:+77596180 None:intergenic
TCACCTAATGAATTGTGTTC+TGG 0.380345 3.1:-77594109 MS.gene06335:intron
CCTTTCGCCTGGAGCAGTCT+TGG 0.384297 3.1:-77594351 MS.gene06335:CDS
CTCGTTGGTTACGAAATTCC+TGG 0.384416 3.1:-77594659 MS.gene06335:CDS
ACCGGGTTATACTGTTTGTA+AGG 0.392688 3.1:-77595499 MS.gene06335:CDS
GTAAACACACCTTTCCCTTT+CGG 0.395044 3.1:+77595810 None:intergenic
GGAGGTATATGTGGAGGAAT+GGG 0.400881 3.1:-77595935 MS.gene06335:CDS
GTATACAGTGGAAGTTTATC+AGG 0.401485 3.1:-77596254 MS.gene06335:CDS
CTTGACTTCAGACTTCTTCA+AGG 0.404538 3.1:+77594900 None:intergenic
GGCCATGTCAGGTGCTCATC+AGG 0.408142 3.1:-77594723 MS.gene06335:intron
ATTTGTATTTGGGAGCTTGA+TGG 0.412365 3.1:-77595684 MS.gene06335:CDS
CCACTGTATACGTCGCCGTT+TGG 0.415330 3.1:+77596266 None:intergenic
TTGATTCTTAATCTTCAATT+GGG 0.418290 3.1:-77595459 MS.gene06335:CDS
GGGAAATTCTCATGGCCATC+AGG 0.424679 3.1:-77596143 MS.gene06335:CDS
TATGTGGGTTGTTGGGAGAA+TGG 0.426025 3.1:-77595837 MS.gene06335:CDS
GTGTTGGTGTTGGTGATGTA+GGG 0.426176 3.1:-77595575 MS.gene06335:CDS
GATGGAAGTGAATCAGAGAT+TGG 0.430424 3.1:-77595600 MS.gene06335:CDS
CCTGGAAGCAGAGGGAATAA+TGG 0.435359 3.1:-77594194 MS.gene06335:CDS
ACAAATAGCAAGCATGTAAT+CGG 0.437021 3.1:+77595011 None:intergenic
TTTCATACACAGAATCTTTG+TGG 0.437698 3.1:-77592686 MS.gene06335:CDS
TGATACTTATAAAGGTTCTT+GGG 0.438562 3.1:-77596051 MS.gene06335:CDS
GGAATCGTTATGTGGGTTGT+TGG 0.438945 3.1:-77595845 MS.gene06335:CDS
ATACCAGAACACAATTCATT+AGG 0.439028 3.1:+77594106 None:intergenic
TTTGTATTTGGGAGCTTGAT+GGG 0.440443 3.1:-77595683 MS.gene06335:CDS
CGATGGGGATGTTAAGAAAC+CGG 0.442381 3.1:-77595517 MS.gene06335:CDS
ATCTAAAATCCACCGATTGA+TGG 0.444477 3.1:+77595212 None:intergenic
TGCTAATGGTGATGTGTATG+AGG 0.445109 3.1:-77595991 MS.gene06335:CDS
GGATTGGATCAGCAGCAAAC+TGG 0.447072 3.1:-77592898 MS.gene06335:CDS
TTAATTCCCAGCCGGATTAG+AGG 0.447492 3.1:+77592955 None:intergenic
GTTGGGTATTTAGGCATTTG+AGG 0.449375 3.1:-77595056 MS.gene06335:intron
TTGGGTATTTAGGCATTTGA+GGG 0.449393 3.1:-77595055 MS.gene06335:intron
AAGGTTCTTGGGTTTCTGAT+AGG 0.451720 3.1:-77596040 MS.gene06335:CDS
CGTGATGGGAGTGTTTCATC+AGG 0.451975 3.1:-77595783 MS.gene06335:CDS
GTGGAAGGTGATACTTATAA+AGG 0.453599 3.1:-77596059 MS.gene06335:CDS
ACAGACCCGATTTATTGTAA+TGG 0.455479 3.1:-77594509 MS.gene06335:intron
TCTAAAATCCACCGATTGAT+GGG 0.456122 3.1:+77595213 None:intergenic
TCTGATAGGAAACATGGGTT+TGG 0.456876 3.1:-77596026 MS.gene06335:CDS
CTTGGGATCAACGGCTGAGA+TGG 0.457259 3.1:+77592732 None:intergenic
GATTACATGCTTGCTATTTG+TGG 0.457685 3.1:-77595009 MS.gene06335:CDS
ATGGGGAAGGGAGGTATATG+TGG 0.461629 3.1:-77595944 MS.gene06335:CDS
ATACCAGAGGACCTCTAATC+CGG 0.461846 3.1:-77592966 MS.gene06335:intron
TGGGAGCTTGATGGGGAAGC+TGG 0.464916 3.1:-77595675 MS.gene06335:CDS
ATCCCAAGCTATATTCCAAA+AGG 0.465411 3.1:-77592717 MS.gene06335:CDS
GTCCTTGTTATTCGATCGAT+GGG 0.468826 3.1:-77595533 MS.gene06335:CDS
GCGGAGAGAGTGTGTAAAGC+TGG 0.469147 3.1:-77592919 MS.gene06335:CDS
GAAGAGTGCATACCGGCCTA+TGG 0.469968 3.1:+77593941 None:intergenic
GCCGTGTTCGCGGTGGTCGA+CGG 0.472053 3.1:+77596321 None:intergenic
GGTGAGAAATGTTATGCTAA+TGG 0.475438 3.1:-77596005 MS.gene06335:CDS
GAATCGTTATGTGGGTTGTT+GGG 0.476688 3.1:-77595844 MS.gene06335:CDS
GAGATTGGTGGTGTTGGTGT+TGG 0.478650 3.1:-77595585 MS.gene06335:CDS
CAAATCGGTCATCTTGAGTA+AGG 0.481065 3.1:+77594932 None:intergenic
GGGAGGTATATGTGGAGGAA+TGG 0.483176 3.1:-77595936 MS.gene06335:CDS
GTTTCTGTGAGTGTGGATGA+TGG 0.484895 3.1:-77595732 MS.gene06335:CDS
CAAACCTATTGGAGGCCAAA+AGG 0.485887 3.1:-77594623 MS.gene06335:intron
GGTGACACGCGCCGTGTTCG+CGG 0.487367 3.1:+77596311 None:intergenic
CTTGAAACCAAGACTGCTCC+AGG 0.487985 3.1:+77594344 None:intergenic
GGAGGTGCAATTTGCAAGAT+GGG 0.490169 3.1:-77595962 MS.gene06335:CDS
GAAGAATGGGAATCGTTATG+TGG 0.493445 3.1:-77595853 MS.gene06335:CDS
TTGAGGGAAATGTCTTCTCC+TGG 0.493901 3.1:-77594976 MS.gene06335:CDS
TTGATGGGGAGGCGTAAACT+TGG 0.495578 3.1:+77595228 None:intergenic
GGAATATAGCTTGGGATCAA+CGG 0.495725 3.1:+77592723 None:intergenic
GAGAGTGTGTAAAGCTGGAT+TGG 0.495931 3.1:-77592914 MS.gene06335:CDS
GACCATGAGATGAACCTTTG+AGG 0.496961 3.1:+77594443 None:intergenic
CAGAGGACCTCTAATCCGGC+TGG 0.499620 3.1:-77592962 MS.gene06335:CDS
TCAACGGCTGAGATGGATGT+GGG 0.500864 3.1:+77592739 None:intergenic
GTGATGTGTATGAGGGTTGG+TGG 0.503545 3.1:-77595983 MS.gene06335:CDS
TGCAATTTGCAAGATGGGGA+AGG 0.504770 3.1:-77595957 MS.gene06335:CDS
TGTATACGTCGCCGTTTGGA+AGG 0.506660 3.1:+77596270 None:intergenic
ATGTGTATGAGGGTTGGTGG+AGG 0.506922 3.1:-77595980 MS.gene06335:CDS
TTGTGTTGGGAAGCATGCTT+CGG 0.507813 3.1:-77595323 MS.gene06335:CDS
TAGTCTCATCAATATCCTTA+CGG 0.513121 3.1:+77594404 None:intergenic
GACCTCAAAGGTTCATCTCA+TGG 0.520619 3.1:-77594445 MS.gene06335:CDS
CATAAGCGATTTGACCTCAA+AGG 0.521058 3.1:-77594457 MS.gene06335:CDS
TGGGTTTCTGATAGGAAACA+TGG 0.521152 3.1:-77596032 MS.gene06335:CDS
TGTGGTGCTATATGTGGTAA+TGG 0.522855 3.1:-77595888 MS.gene06335:CDS
GTGCCTCGAGAGCTTAGATC+AGG 0.523004 3.1:-77595301 MS.gene06335:CDS
TGGAGGTGCAATTTGCAAGA+TGG 0.525391 3.1:-77595963 MS.gene06335:CDS
CAAAGGAGAAATTCTGGACA+AGG 0.526565 3.1:-77595267 MS.gene06335:CDS
ATCAACGGCTGAGATGGATG+TGG 0.528438 3.1:+77592738 None:intergenic
AGTAATCATCACGAAAATGA+AGG 0.531530 3.1:+77594152 None:intergenic
TACCAAGGAGAATGGAAGAA+AGG 0.532077 3.1:-77596182 MS.gene06335:CDS
GGTGTTGGTGATGTAGGGTA+TGG 0.535016 3.1:-77595570 MS.gene06335:CDS
GATGCATGTACCAAGGAGAA+TGG 0.535617 3.1:-77596190 MS.gene06335:CDS
TTGTGGCAATGATACGTTGA+GGG 0.538744 3.1:-77594992 MS.gene06335:CDS
AGTCCTTGTTATTCGATCGA+TGG 0.540552 3.1:-77595534 MS.gene06335:CDS
TTGTGATATTGTTGATAATG+TGG 0.540603 3.1:-77595643 MS.gene06335:CDS
TGCATACAAGTCACTACAAG+TGG 0.541017 3.1:-77592764 MS.gene06335:CDS
TATTTCCACCTGAACACCAC+GGG 0.543557 3.1:+77595175 None:intergenic
GTGTGTTTACGTGGCGTGAT+GGG 0.545765 3.1:-77595797 MS.gene06335:CDS
CCATCAGGAGCTACTTATGA+AGG 0.545903 3.1:-77596128 MS.gene06335:CDS
GAAAGGCAAAACTAAGATCA+AGG 0.546651 3.1:+77594368 None:intergenic
GCCGTCGACCACCGCGAACA+CGG 0.548092 3.1:-77596322 MS.gene06335:CDS
GTTCGCGGTGGTCGACGGCA+TGG 0.548954 3.1:+77596326 None:intergenic
ATGGTGATGTGTATGAGGGT+TGG 0.549055 3.1:-77595986 MS.gene06335:CDS
TGGACAAGGTTTCCTCCAGA+AGG 0.550122 3.1:-77595253 MS.gene06335:CDS
CTTGAAGAAGTCTGAAGTCA+AGG 0.551924 3.1:-77594899 MS.gene06335:intron
TTTATTTCAGGGGCCATGGA+AGG 0.553483 3.1:-77596101 MS.gene06335:CDS
GGAATGAGTATGTTGGTGAA+TGG 0.558164 3.1:-77595914 MS.gene06335:CDS
ATTGCCCATTACAATAAATC+GGG 0.558443 3.1:+77594504 None:intergenic
AGCTCCCAAATACAAATCCT+AGG 0.558462 3.1:+77595690 None:intergenic
AATGGAAGAAAGGTAAAGCA+TGG 0.560447 3.1:-77596172 MS.gene06335:CDS
CCAAGACTGCTCCAGGCGAA+AGG 0.561092 3.1:+77594351 None:intergenic
ATAGCAAGCATGTAATCGGC+AGG 0.561196 3.1:+77595015 None:intergenic
CTGGCATGTTAATTCCCAGC+CGG 0.561746 3.1:+77592947 None:intergenic
ACGGCAAAGGTAAATACGTA+TGG 0.563043 3.1:-77596220 MS.gene06335:CDS
ATCTCACCGCTACTCTCTGA+AGG 0.563905 3.1:+77592859 None:intergenic
TTGTATTTGGGAGCTTGATG+GGG 0.567064 3.1:-77595682 MS.gene06335:CDS
GTTTACGCCTCCCCATCAAT+CGG 0.568425 3.1:-77595224 MS.gene06335:CDS
GGTGTGTTTACGTGGCGTGA+TGG 0.569414 3.1:-77595798 MS.gene06335:CDS
TCGTTGGTTACGAAATTCCT+GGG 0.571328 3.1:-77594658 MS.gene06335:CDS
GCAATTTGCAAGATGGGGAA+GGG 0.571866 3.1:-77595956 MS.gene06335:CDS
GGGAGAATGGTGTGCCGAAA+GGG 0.571892 3.1:-77595824 MS.gene06335:CDS
AAGAGTGCATACCGGCCTAT+GGG 0.572174 3.1:+77593942 None:intergenic
CCCTTACAAACAGTATAACC+CGG 0.573249 3.1:+77595498 None:intergenic
ATGACACTCAGGACACGAGA+TGG 0.576124 3.1:-77593968 MS.gene06335:CDS
CTGTGAGTTCCTGGAAGCAG+AGG 0.577302 3.1:-77594203 MS.gene06335:CDS
AAAAGTTCCAGAACCTTCCA+TGG 0.577662 3.1:+77596088 None:intergenic
AATGGTGTGCCGAAAGGGAA+AGG 0.577935 3.1:-77595819 MS.gene06335:CDS
CATTGTGTCAAACCTATTGG+AGG 0.578059 3.1:-77594631 MS.gene06335:CDS
GGGGAATGATGCCAAGAAGA+GGG 0.579761 3.1:-77595754 MS.gene06335:CDS
ATGGAAGAAAGGTAAAGCAT+GGG 0.583487 3.1:-77596171 MS.gene06335:CDS
GGATGATGGTTCTAAGAGTG+TGG 0.588270 3.1:-77595718 MS.gene06335:CDS
AATTAACATGCCAGCAAGAG+CGG 0.589839 3.1:-77592938 MS.gene06335:CDS
GGTAAATACGTATGGAACGA+TGG 0.590153 3.1:-77596212 MS.gene06335:CDS
GACAACCGATAAACTCCGTA+AGG 0.596237 3.1:-77594419 MS.gene06335:CDS
CCGGGTTATACTGTTTGTAA+GGG 0.599766 3.1:-77595498 MS.gene06335:CDS
AGAGGACCTCTAATCCGGCT+GGG 0.601886 3.1:-77592961 MS.gene06335:CDS
GAATCAGAGATTGGTGGTGT+TGG 0.602478 3.1:-77595591 MS.gene06335:CDS
TTCTCAGTACAAGAACTCGT+TGG 0.608088 3.1:-77594674 MS.gene06335:CDS
CGAGATGGATACCCATAGGC+CGG 0.610897 3.1:-77593953 MS.gene06335:intron
AGTGTTTCATCAGGGAATTG+GGG 0.612643 3.1:-77595774 MS.gene06335:CDS
TGGAAGAAAGGTAAAGCATG+GGG 0.615750 3.1:-77596170 MS.gene06335:CDS
AAATCCACCGATTGATGGGG+AGG 0.615911 3.1:+77595217 None:intergenic
GCTAATGGTGATGTGTATGA+GGG 0.617886 3.1:-77595990 MS.gene06335:CDS
TGGAAATGTGGTGCTATATG+TGG 0.618355 3.1:-77595894 MS.gene06335:CDS
TCTCACCGCTACTCTCTGAA+GGG 0.618386 3.1:+77592860 None:intergenic
GGGTTTCTGATAGGAAACAT+GGG 0.619609 3.1:-77596031 MS.gene06335:CDS
CCTTCATAAGTAGCTCCTGA+TGG 0.620490 3.1:+77596128 None:intergenic
AAGGGAAAGGTGTGTTTACG+TGG 0.620553 3.1:-77595806 MS.gene06335:CDS
TGTGAGTTCCTGGAAGCAGA+GGG 0.621723 3.1:-77594202 MS.gene06335:CDS
GGGAAGGGAGGTATATGTGG+AGG 0.626837 3.1:-77595941 MS.gene06335:CDS
TCAAAGGTTCATCTCATGGT+CGG 0.627326 3.1:-77594441 MS.gene06335:CDS
TCTCCTGATCTAAGCTCTCG+AGG 0.629245 3.1:+77595298 None:intergenic
GAAGAGGGTTTCTGTGAGTG+TGG 0.631349 3.1:-77595739 MS.gene06335:CDS
ACGTATTTACCTTTGCCGTG+TGG 0.632527 3.1:+77596224 None:intergenic
TGGGAGAATGGTGTGCCGAA+AGG 0.634731 3.1:-77595825 MS.gene06335:CDS
GTGTTTCATCAGGGAATTGG+GGG 0.636387 3.1:-77595773 MS.gene06335:CDS
AAGAATGGGAATCGTTATGT+GGG 0.637878 3.1:-77595852 MS.gene06335:CDS
GACACGAGATGGATACCCAT+AGG 0.639932 3.1:-77593957 MS.gene06335:CDS
GTTTGACACAATGAACTCCC+AGG 0.642986 3.1:+77594641 None:intergenic
AGGAATGGGAATGAGTATGT+TGG 0.643494 3.1:-77595921 MS.gene06335:CDS
TACGCCTCCCCATCAATCGG+TGG 0.646074 3.1:-77595221 MS.gene06335:CDS
ATTTGCAAGATGGGGAAGGG+AGG 0.650775 3.1:-77595953 MS.gene06335:CDS
TATGTTGGTGAATGGAAATG+TGG 0.655881 3.1:-77595906 MS.gene06335:CDS
CATACACAGAATCTTTGTGG+AGG 0.658046 3.1:-77592683 MS.gene06335:CDS
CCAAACGGCGACGTATACAG+TGG 0.660988 3.1:-77596266 MS.gene06335:CDS
CTAAAATCCACCGATTGATG+GGG 0.661133 3.1:+77595214 None:intergenic
GATGGGGATGTTAAGAAACC+GGG 0.661758 3.1:-77595516 MS.gene06335:CDS
CATGCAAAATGATGACACTC+AGG 0.664084 3.1:-77593979 MS.gene06335:CDS
GGAAACACACCACACGGCAA+AGG 0.664480 3.1:-77596233 MS.gene06335:CDS
GACACGCGCCGTGTTCGCGG+TGG 0.667971 3.1:+77596314 None:intergenic
GTAAACTTGGAACCTTCTGG+AGG 0.668383 3.1:+77595241 None:intergenic
TTATTTCCACCTGAACACCA+CGG 0.668462 3.1:+77595174 None:intergenic
TTATCAGGAAACACACCACA+CGG 0.669927 3.1:-77596239 MS.gene06335:CDS
GAAACATGTTGATAGTAACT+GGG 0.673484 3.1:+77594694 None:intergenic
GTGATGGGAGTGTTTCATCA+GGG 0.673719 3.1:-77595782 MS.gene06335:CDS
AACGATGGATGCATGTACCA+AGG 0.678792 3.1:-77596197 MS.gene06335:CDS
GAGGTGCAATTTGCAAGATG+GGG 0.686193 3.1:-77595961 MS.gene06335:CDS
GGAAGAAAGGTAAAGCATGG+GGG 0.686830 3.1:-77596169 MS.gene06335:CDS
CTCACCGCTACTCTCTGAAG+GGG 0.694466 3.1:+77592861 None:intergenic
ATGGAAAGACTACTGTCCCG+TGG 0.696500 3.1:-77595191 MS.gene06335:CDS
CAACGGCTGAGATGGATGTG+GGG 0.698303 3.1:+77592740 None:intergenic
TTTGTGGCAATGATACGTTG+AGG 0.698388 3.1:-77594993 MS.gene06335:CDS
TCTACCCCTTCAGAGAGTAG+CGG 0.711188 3.1:-77592865 MS.gene06335:CDS
GGAAGTGAATCAGAGATTGG+TGG 0.714127 3.1:-77595597 MS.gene06335:CDS
TCCCCATCGATCGAATAACA+AGG 0.724583 3.1:+77595531 None:intergenic
TCCTTGTTATTCGATCGATG+GGG 0.734954 3.1:-77595532 MS.gene06335:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAATTTTTATAATTTCACA+AGG + chr3.1:77595233-77595252 None:intergenic 10.0%
!! AAAAAAACTTACTATAACAT+TGG + chr3.1:77595795-77595814 None:intergenic 15.0%
!! AGAAACATTATTAACTATTT+CGG - chr3.1:77592680-77592699 MS.gene06335:CDS 15.0%
!! TAAAATGTAGCAATAAAAAA+TGG + chr3.1:77595440-77595459 None:intergenic 15.0%
!! TATGAAAAGATTATTCATTT+AGG - chr3.1:77595458-77595477 MS.gene06335:CDS 15.0%
!!! TATTAATGATGTTTGTATTT+TGG - chr3.1:77593997-77594016 MS.gene06335:intron 15.0%
!! AGAACAAATCAATAAATGAT+GGG + chr3.1:77595372-77595391 None:intergenic 20.0%
!! TAGAACAAATCAATAAATGA+TGG + chr3.1:77595373-77595392 None:intergenic 20.0%
!! TATTAAATATCTGCATAGTT+AGG + chr3.1:77596086-77596105 None:intergenic 20.0%
!! TCAAGTCTAGTAATTAATTA+AGG + chr3.1:77594242-77594261 None:intergenic 20.0%
!! TGTCAATATTTATATGTAAC+TGG + chr3.1:77595944-77595963 None:intergenic 20.0%
!! TTGATTCTTAATCTTCAATT+GGG - chr3.1:77593638-77593657 MS.gene06335:intron 20.0%
!! TTTGATTCTTAATCTTCAAT+TGG - chr3.1:77593637-77593656 MS.gene06335:intron 20.0%
!!! TTGGTTTATTTTTATGTGTT+TGG - chr3.1:77593711-77593730 MS.gene06335:intron 20.0%
!!! TTTGTTTTAGATATTGTGTT+GGG - chr3.1:77593761-77593780 MS.gene06335:intron 20.0%
!!! TTTTGCTAATATCATAATCT+TGG + chr3.1:77596303-77596322 None:intergenic 20.0%
!!! TTTTGTTTTAGATATTGTGT+TGG - chr3.1:77593760-77593779 MS.gene06335:intron 20.0%
! AATGAATACTTGTATTGCTA+TGG - chr3.1:77594561-77594580 MS.gene06335:intron 25.0%
! ACAACAAAAACAATCAGATA+CGG + chr3.1:77595191-77595210 None:intergenic 25.0%
! GACTAAATATGGAAAATTCA+AGG + chr3.1:77595272-77595291 None:intergenic 25.0%
! TAAAAGTAAAAGAAATGACC+CGG + chr3.1:77595516-77595535 None:intergenic 25.0%
! TAGAAATCAAAGTCACTTAT+GGG - chr3.1:77595391-77595410 MS.gene06335:intron 25.0%
! TATAAAACCTATATTGAGCA+AGG - chr3.1:77594288-77594307 MS.gene06335:intron 25.0%
! TCTAGTAATTAATTAAGGCT+AGG + chr3.1:77594237-77594256 None:intergenic 25.0%
! TGATACTTATAAAGGTTCTT+GGG - chr3.1:77593046-77593065 MS.gene06335:intron 25.0%
! TGTTATCTACATTGTTAGTT+TGG - chr3.1:77593680-77593699 MS.gene06335:intron 25.0%
! TTAAAAGATTTGTGGGATTA+TGG - chr3.1:77595076-77595095 MS.gene06335:intron 25.0%
! TTAATCTTCAATTGGGTATT+AGG - chr3.1:77593645-77593664 MS.gene06335:intron 25.0%
! TTCAGTGCAAAATTTAAACT+AGG + chr3.1:77594509-77594528 None:intergenic 25.0%
!! TTTTATGATGTTCTTAGAGT+TGG - chr3.1:77594832-77594851 MS.gene06335:intron 25.0%
!! TTTTCCTAGGATTTGTATTT+GGG - chr3.1:77593403-77593422 MS.gene06335:intron 25.0%
!! TTTTCTTTGCATTTGTGTTT+TGG + chr3.1:77592716-77592735 None:intergenic 25.0%
!! TTTTGCTTCTATTTGCATTA+TGG + chr3.1:77595580-77595599 None:intergenic 25.0%
!! TTTTGTAATGATTTTTGCTC+AGG - chr3.1:77594857-77594876 MS.gene06335:intron 25.0%
!! TTTTTCCTAGGATTTGTATT+TGG - chr3.1:77593402-77593421 MS.gene06335:intron 25.0%
!!! AATGATGTTTGTATTTTGGT+GGG - chr3.1:77594001-77594020 MS.gene06335:intron 25.0%
!!! ATGAAGGTGATTTTATTTCA+GGG - chr3.1:77592985-77593004 MS.gene06335:intron 25.0%
!!! GTGTTTTAATTTGGAAGAAT+GGG - chr3.1:77593231-77593250 MS.gene06335:intron 25.0%
!!! TAATGATGTTTGTATTTTGG+TGG - chr3.1:77594000-77594019 MS.gene06335:intron 25.0%
!!! TATGAAGGTGATTTTATTTC+AGG - chr3.1:77592984-77593003 MS.gene06335:intron 25.0%
!!! TCAAGGTTTTGATTACAAAT+CGG + chr3.1:77594183-77594202 None:intergenic 25.0%
!!! TCTGATGTAATCCTTTATTT+TGG - chr3.1:77596262-77596281 MS.gene06335:CDS 25.0%
!!! TTGTGATATTGTTGATAATG+TGG - chr3.1:77593454-77593473 MS.gene06335:intron 25.0%
AATATCCTTACGGAGTTTAT+CGG + chr3.1:77594686-77594705 None:intergenic 30.0%
AATTCACATGAAAGGAAACA+TGG + chr3.1:77595041-77595060 None:intergenic 30.0%
AATTTCACCTTGCTCAATAT+AGG + chr3.1:77594298-77594317 None:intergenic 30.0%
ACAAATAGCAAGCATGTAAT+CGG + chr3.1:77594089-77594108 None:intergenic 30.0%
AGCTATATTCCAAAAGGTTT+AGG - chr3.1:77596386-77596405 MS.gene06335:CDS 30.0%
AGTAATCATCACGAAAATGA+AGG + chr3.1:77594948-77594967 None:intergenic 30.0%
AGTGAAAGAAACTTTACACA+AGG + chr3.1:77594804-77594823 None:intergenic 30.0%
ATACCAGAACACAATTCATT+AGG + chr3.1:77594994-77595013 None:intergenic 30.0%
ATCCTCAAAACTTATCTCTT+TGG + chr3.1:77595295-77595314 None:intergenic 30.0%
ATTGCCCATTACAATAAATC+GGG + chr3.1:77594596-77594615 None:intergenic 30.0%
CAATGATATTGATAGAGCAA+TGG - chr3.1:77595878-77595897 MS.gene06335:CDS 30.0%
CATTGCCCATTACAATAAAT+CGG + chr3.1:77594597-77594616 None:intergenic 30.0%
CTAGAAATCAAAGTCACTTA+TGG - chr3.1:77595390-77595409 MS.gene06335:intron 30.0%
GCTATATTCCAAAAGGTTTA+GGG - chr3.1:77596387-77596406 MS.gene06335:CDS 30.0%
GTGATACTTATAAAGGTTCT+TGG - chr3.1:77593045-77593064 MS.gene06335:intron 30.0%
TAGTCTCATCAATATCCTTA+CGG + chr3.1:77594696-77594715 None:intergenic 30.0%
TATGATTCTTGATATACCAG+AGG - chr3.1:77596118-77596137 MS.gene06335:CDS 30.0%
TCCTCAAAACTTATCTCTTT+GGG + chr3.1:77595294-77595313 None:intergenic 30.0%
TGTCAATGATGCCAAAATAA+AGG + chr3.1:77596276-77596295 None:intergenic 30.0%
TGTTTCTTTGTTGGGTATTT+AGG - chr3.1:77594032-77594051 MS.gene06335:intron 30.0%
TTTAGTAATCCGTTTCTCTT+GGG - chr3.1:77596035-77596054 MS.gene06335:CDS 30.0%
TTTCATACACAGAATCTTTG+TGG - chr3.1:77596411-77596430 MS.gene06335:CDS 30.0%
! AAATCTTTTAACCCTTGGAT+CGG + chr3.1:77595067-77595086 None:intergenic 30.0%
! AACAAATAGCTTTACAGAGA+AGG + chr3.1:77595852-77595871 None:intergenic 30.0%
! CTACATTGTTAGTTTGGATT+TGG - chr3.1:77593686-77593705 MS.gene06335:intron 30.0%
! GCTTGTATGTTTTATAGAGA+TGG - chr3.1:77593479-77593498 MS.gene06335:intron 30.0%
! TATGAAATCCCTAAACCTTT+TGG + chr3.1:77596398-77596417 None:intergenic 30.0%
! TATTTCTACATGACTAGTAG+TGG + chr3.1:77595666-77595685 None:intergenic 30.0%
! TGGCGTTTTTAATAAGATTG+TGG - chr3.1:77593731-77593750 MS.gene06335:intron 30.0%
! TGTTAGTTTGGATTTGGATT+TGG - chr3.1:77593692-77593711 MS.gene06335:intron 30.0%
! TTTTAGTAATCCGTTTCTCT+TGG - chr3.1:77596034-77596053 MS.gene06335:CDS 30.0%
! TTTTCGTGATGATTACTCAT+CGG - chr3.1:77594951-77594970 MS.gene06335:CDS 30.0%
!! AGAAACATGTTGATAGTAAC+TGG + chr3.1:77594407-77594426 None:intergenic 30.0%
!! CAAATCAATAAATGATGGGT+TGG + chr3.1:77595368-77595387 None:intergenic 30.0%
!! GAAACATGTTGATAGTAACT+GGG + chr3.1:77594406-77594425 None:intergenic 30.0%
!! TATCTCTTTGGGACTAAATA+TGG + chr3.1:77595283-77595302 None:intergenic 30.0%
!! TGAAGGTGATTTTATTTCAG+GGG - chr3.1:77592986-77593005 MS.gene06335:intron 30.0%
!! TTTTGAGGATTTAGAAATGC+TGG - chr3.1:77595305-77595324 MS.gene06335:CDS 30.0%
!!! AAACCTTTTGGAATATAGCT+TGG + chr3.1:77596386-77596405 None:intergenic 30.0%
!!! AACCTTTTGGAATATAGCTT+GGG + chr3.1:77596385-77596404 None:intergenic 30.0%
!!! ATGATGTTTGTATTTTGGTG+GGG - chr3.1:77594002-77594021 MS.gene06335:intron 30.0%
!!! GGTGTTTTAATTTGGAAGAA+TGG - chr3.1:77593230-77593249 MS.gene06335:intron 30.0%
!!! GTGGTAATGGTGTTTTAATT+TGG - chr3.1:77593222-77593241 MS.gene06335:intron 30.0%
!!! GTTTTTTTGACAACAAATGC+TGG - chr3.1:77595807-77595826 MS.gene06335:CDS 30.0%
!!! TTGTTTTTGTTGTTTCAGCT+TGG - chr3.1:77595198-77595217 MS.gene06335:CDS 30.0%
AAGAATGGGAATCGTTATGT+GGG - chr3.1:77593245-77593264 MS.gene06335:intron 35.0%
AATGGAAGAAAGGTAAAGCA+TGG - chr3.1:77592925-77592944 MS.gene06335:CDS 35.0%
ACAGACCCGATTTATTGTAA+TGG - chr3.1:77594588-77594607 MS.gene06335:intron 35.0%
ATCCCAAGCTATATTCCAAA+AGG - chr3.1:77596380-77596399 MS.gene06335:CDS 35.0%
ATCGGACAAATTCACATGAA+AGG + chr3.1:77595049-77595068 None:intergenic 35.0%
ATGAAAGGAAACATGGAACT+AGG + chr3.1:77595034-77595053 None:intergenic 35.0%
ATGGAAGAAAGGTAAAGCAT+GGG - chr3.1:77592926-77592945 MS.gene06335:CDS 35.0%
ATTTGTATTTGGGAGCTTGA+TGG - chr3.1:77593413-77593432 MS.gene06335:intron 35.0%
CACAAATGCAAAGAAAAACG+AGG - chr3.1:77592719-77592738 MS.gene06335:CDS 35.0%
CACTTCTAAATCACAGATAG+AGG + chr3.1:77595721-77595740 None:intergenic 35.0%
CAGACCCGATTTATTGTAAT+GGG - chr3.1:77594589-77594608 MS.gene06335:intron 35.0%
CATGACAAATCAAGTCATTG+TGG + chr3.1:77595771-77595790 None:intergenic 35.0%
CCAACTAATCATTGAAACAG+AGG + chr3.1:77594353-77594372 None:intergenic 35.0%
CCAAGGGTTAAAAGATTTGT+GGG - chr3.1:77595069-77595088 MS.gene06335:intron 35.0%
CCTCTGTTTCAATGATTAGT+TGG - chr3.1:77594350-77594369 MS.gene06335:CDS 35.0%
CTTGGTTTCAAGAGCTAAAA+TGG - chr3.1:77594764-77594783 MS.gene06335:intron 35.0%
GAAAGGCAAAACTAAGATCA+AGG + chr3.1:77594732-77594751 None:intergenic 35.0%
GGTGAGAAATGTTATGCTAA+TGG - chr3.1:77593092-77593111 MS.gene06335:intron 35.0%
GTAGAAAAACACCTTCCAAA+CGG - chr3.1:77592816-77592835 MS.gene06335:CDS 35.0%
GTATACAGTGGAAGTTTATC+AGG - chr3.1:77592843-77592862 MS.gene06335:CDS 35.0%
GTCATGTAGAAATAAAGCAG+TGG - chr3.1:77595672-77595691 MS.gene06335:CDS 35.0%
GTGGAAGGTGATACTTATAA+AGG - chr3.1:77593038-77593057 MS.gene06335:intron 35.0%
GTTCATTGTGTCAAACCTAT+TGG - chr3.1:77594463-77594482 MS.gene06335:CDS 35.0%
TAGACTAAAGCTCAAGAACA+TGG + chr3.1:77595547-77595566 None:intergenic 35.0%
TCACCTAATGAATTGTGTTC+TGG - chr3.1:77594988-77595007 MS.gene06335:CDS 35.0%
TCCAAGGGTTAAAAGATTTG+TGG - chr3.1:77595068-77595087 MS.gene06335:intron 35.0%
TGATATTGATAGAGCAATGG+TGG - chr3.1:77595881-77595900 MS.gene06335:CDS 35.0%
TGCAAAGAAAAACGAGGAAA+TGG - chr3.1:77592725-77592744 MS.gene06335:CDS 35.0%
TGCTTCTATTTGCATTATGG+CGG + chr3.1:77595577-77595596 None:intergenic 35.0%
TTATGGGAATGTGGATTCAT+GGG - chr3.1:77595407-77595426 MS.gene06335:intron 35.0%
TTGATCCAAAGGAGAAATTC+TGG - chr3.1:77593824-77593843 MS.gene06335:intron 35.0%
TTGGGTATTTAGGCATTTGA+GGG - chr3.1:77594042-77594061 MS.gene06335:intron 35.0%
TTTGTATTTGGGAGCTTGAT+GGG - chr3.1:77593414-77593433 MS.gene06335:intron 35.0%
! ATAAAGTGAAGAGTGCATAC+CGG + chr3.1:77595166-77595185 None:intergenic 35.0%
! ATCTAAAATCCACCGATTGA+TGG + chr3.1:77593888-77593907 None:intergenic 35.0%
! CTGTTTCAATGATTAGTTGG+TGG - chr3.1:77594353-77594372 MS.gene06335:CDS 35.0%
! GGGTTGTTTGTTTCTTTGTT+GGG - chr3.1:77594024-77594043 MS.gene06335:intron 35.0%
! TATGTTGGTGAATGGAAATG+TGG - chr3.1:77593191-77593210 MS.gene06335:intron 35.0%
! TCCCAAAGAGATAAGTTTTG+AGG - chr3.1:77595290-77595309 MS.gene06335:CDS 35.0%
! TCTAAAATCCACCGATTGAT+GGG + chr3.1:77593887-77593906 None:intergenic 35.0%
! TTCTTGAGCTTTAGTCTATC+TGG - chr3.1:77595549-77595568 MS.gene06335:CDS 35.0%
!! AATGGGCAATGTGTTTTGTT+CGG - chr3.1:77594606-77594625 MS.gene06335:intron 35.0%
!! ATCAATCGGTGGATTTTAGA+TGG - chr3.1:77593887-77593906 MS.gene06335:intron 35.0%
!! ATCAGGAGATTTTGATCCAA+AGG - chr3.1:77593813-77593832 MS.gene06335:intron 35.0%
!! ATGGACTACAGTTTTCTCAT+TGG - chr3.1:77594922-77594941 MS.gene06335:CDS 35.0%
!! CACAATGACTTGATTTGTCA+TGG - chr3.1:77595769-77595788 MS.gene06335:CDS 35.0%
!! GATTACATGCTTGCTATTTG+TGG - chr3.1:77594088-77594107 MS.gene06335:intron 35.0%
!! TCTTTGCATTTGTGTTTTGG+TGG + chr3.1:77592713-77592732 None:intergenic 35.0%
!!! TGATGTTTGTATTTTGGTGG+GGG - chr3.1:77594003-77594022 MS.gene06335:intron 35.0%
!!! TTTGGAAGGTGTTTTTCTAC+TGG + chr3.1:77592816-77592835 None:intergenic 35.0%
AAAAGTTCCAGAACCTTCCA+TGG + chr3.1:77593012-77593031 None:intergenic 40.0%
AAAGGAAACATGGAACTAGG+AGG + chr3.1:77595031-77595050 None:intergenic 40.0%
AAGGTTCTTGGGTTTCTGAT+AGG - chr3.1:77593057-77593076 MS.gene06335:intron 40.0%
AAGTAAAAGAAATGACCCGG+TGG + chr3.1:77595513-77595532 None:intergenic 40.0%
AATTAACATGCCAGCAAGAG+CGG - chr3.1:77596159-77596178 MS.gene06335:CDS 40.0%
ACCGGGTTATACTGTTTGTA+AGG - chr3.1:77593598-77593617 MS.gene06335:intron 40.0%
ACGGCAAAGGTAAATACGTA+TGG - chr3.1:77592877-77592896 MS.gene06335:CDS 40.0%
AGCTCCCAAATACAAATCCT+AGG + chr3.1:77593410-77593429 None:intergenic 40.0%
AGGAATGGGAATGAGTATGT+TGG - chr3.1:77593176-77593195 MS.gene06335:intron 40.0%
AGGATTTAGAAATGCTGGTG+CGG - chr3.1:77595310-77595329 MS.gene06335:CDS 40.0%
AGTGTTTCATCAGGGAATTG+GGG - chr3.1:77593323-77593342 MS.gene06335:intron 40.0%
ATGTCTTCTCCTGGAAAAAG+TGG - chr3.1:77594130-77594149 MS.gene06335:CDS 40.0%
ATGTGAATTTGTCCGATCCA+AGG - chr3.1:77595052-77595071 MS.gene06335:intron 40.0%
ATTGATAGAGCAATGGTGGT+TGG - chr3.1:77595885-77595904 MS.gene06335:CDS 40.0%
CAAAGGAGAAATTCTGGACA+AGG - chr3.1:77593830-77593849 MS.gene06335:intron 40.0%
CAAAGTCACTTATGGGAATG+TGG - chr3.1:77595398-77595417 MS.gene06335:intron 40.0%
CAAATCGGTCATCTTGAGTA+AGG + chr3.1:77594168-77594187 None:intergenic 40.0%
CATAAGCGATTTGACCTCAA+AGG - chr3.1:77594640-77594659 MS.gene06335:CDS 40.0%
CATACACAGAATCTTTGTGG+AGG - chr3.1:77596414-77596433 MS.gene06335:CDS 40.0%
CATGCAAAATGATGACACTC+AGG - chr3.1:77595118-77595137 MS.gene06335:intron 40.0%
CATTGTGTCAAACCTATTGG+AGG - chr3.1:77594466-77594485 MS.gene06335:CDS 40.0%
CCACCCTAAACTAGCAATAT+TGG - chr3.1:77595605-77595624 MS.gene06335:CDS 40.0%
CCCTTACAAACAGTATAACC+CGG + chr3.1:77593602-77593621 None:intergenic 40.0%
CCGGGTTATACTGTTTGTAA+GGG - chr3.1:77593599-77593618 MS.gene06335:intron 40.0%
CTAAATCACAGATAGAGGAC+TGG + chr3.1:77595716-77595735 None:intergenic 40.0%
CTTATGGGAATGTGGATTCA+TGG - chr3.1:77595406-77595425 MS.gene06335:intron 40.0%
CTTGACTTCAGACTTCTTCA+AGG + chr3.1:77594200-77594219 None:intergenic 40.0%
CTTGTCCAGAATTTCTCCTT+TGG + chr3.1:77593832-77593851 None:intergenic 40.0%
GAAGAATGGGAATCGTTATG+TGG - chr3.1:77593244-77593263 MS.gene06335:intron 40.0%
GAGTGTTTCATCAGGGAATT+GGG - chr3.1:77593322-77593341 MS.gene06335:intron 40.0%
GATGGAAGTGAATCAGAGAT+TGG - chr3.1:77593497-77593516 MS.gene06335:intron 40.0%
GCTTCTATTTGCATTATGGC+GGG + chr3.1:77595576-77595595 None:intergenic 40.0%
GGAATATAGCTTGGGATCAA+CGG + chr3.1:77596377-77596396 None:intergenic 40.0%
GGGTTTCTGATAGGAAACAT+GGG - chr3.1:77593066-77593085 MS.gene06335:intron 40.0%
GGTAAATACGTATGGAACGA+TGG - chr3.1:77592885-77592904 MS.gene06335:CDS 40.0%
GTAAACACACCTTTCCCTTT+CGG + chr3.1:77593290-77593309 None:intergenic 40.0%
GTTGGGTATTTAGGCATTTG+AGG - chr3.1:77594041-77594060 MS.gene06335:intron 40.0%
TACCAAGGAGAATGGAAGAA+AGG - chr3.1:77592915-77592934 MS.gene06335:CDS 40.0%
TACCTTTCTTCCATTCTCCT+TGG + chr3.1:77592920-77592939 None:intergenic 40.0%
TCAAAGGTTCATCTCATGGT+CGG - chr3.1:77594656-77594675 MS.gene06335:CDS 40.0%
TCTGATAGGAAACATGGGTT+TGG - chr3.1:77593071-77593090 MS.gene06335:intron 40.0%
TGCATACAAGTCACTACAAG+TGG - chr3.1:77596333-77596352 MS.gene06335:CDS 40.0%
TGGAAGAAAGGTAAAGCATG+GGG - chr3.1:77592927-77592946 MS.gene06335:CDS 40.0%
TGGGTTTCTGATAGGAAACA+TGG - chr3.1:77593065-77593084 MS.gene06335:intron 40.0%
TGTGAATTTGTCCGATCCAA+GGG - chr3.1:77595053-77595072 MS.gene06335:intron 40.0%
TTATCAGGAAACACACCACA+CGG - chr3.1:77592858-77592877 MS.gene06335:CDS 40.0%
TTATTTCCACCTGAACACCA+CGG + chr3.1:77593926-77593945 None:intergenic 40.0%
TTCTCAGTACAAGAACTCGT+TGG - chr3.1:77594423-77594442 MS.gene06335:CDS 40.0%
TTGTATTTGGGAGCTTGATG+GGG - chr3.1:77593415-77593434 MS.gene06335:intron 40.0%
TTGTGGCAATGATACGTTGA+GGG - chr3.1:77594105-77594124 MS.gene06335:intron 40.0%
TTTGACAACAAATGCTGGAG+TGG - chr3.1:77595812-77595831 MS.gene06335:CDS 40.0%
TTTGTGGCAATGATACGTTG+AGG - chr3.1:77594104-77594123 MS.gene06335:intron 40.0%
! ACTAGGTAGTCCATACCTTT+TGG + chr3.1:77594492-77594511 None:intergenic 40.0%
! CCAATATTGCTAGTTTAGGG+TGG + chr3.1:77595608-77595627 None:intergenic 40.0%
! CCCACAAATCTTTTAACCCT+TGG + chr3.1:77595072-77595091 None:intergenic 40.0%
! CTAAAATCCACCGATTGATG+GGG + chr3.1:77593886-77593905 None:intergenic 40.0%
! CTTGAAGAAGTCTGAAGTCA+AGG - chr3.1:77594198-77594217 MS.gene06335:CDS 40.0%
! GAATCGTTATGTGGGTTGTT+GGG - chr3.1:77593253-77593272 MS.gene06335:intron 40.0%
! GCTAATGGTGATGTGTATGA+GGG - chr3.1:77593107-77593126 MS.gene06335:intron 40.0%
! GGAATGAGTATGTTGGTGAA+TGG - chr3.1:77593183-77593202 MS.gene06335:intron 40.0%
! GGGCCAATATTGCTAGTTTA+GGG + chr3.1:77595611-77595630 None:intergenic 40.0%
! GGGGTTGTTTGTTTCTTTGT+TGG - chr3.1:77594023-77594042 MS.gene06335:intron 40.0%
! TATGCTCCTGTTTGTTGAGA+TGG - chr3.1:77595744-77595763 MS.gene06335:CDS 40.0%
! TCGTTGGTTACGAAATTCCT+GGG - chr3.1:77594439-77594458 MS.gene06335:CDS 40.0%
! TGCTAATGGTGATGTGTATG+AGG - chr3.1:77593106-77593125 MS.gene06335:intron 40.0%
! TGGGCCAATATTGCTAGTTT+AGG + chr3.1:77595612-77595631 None:intergenic 40.0%
! TGTGGGATTATGGTTTTTGC+AGG - chr3.1:77595086-77595105 MS.gene06335:intron 40.0%
!! AGTCCTTGTTATTCGATCGA+TGG - chr3.1:77593563-77593582 MS.gene06335:intron 40.0%
!! CTAAGAGTGTGGTTTTTCCT+AGG - chr3.1:77593390-77593409 MS.gene06335:intron 40.0%
!! GTCCTTGTTATTCGATCGAT+GGG - chr3.1:77593564-77593583 MS.gene06335:intron 40.0%
!! TCCTTGTTATTCGATCGATG+GGG - chr3.1:77593565-77593584 MS.gene06335:intron 40.0%
!! TGATTTTATTTCAGGGGCCA+TGG - chr3.1:77592992-77593011 MS.gene06335:intron 40.0%
!! TGGAAATGTGGTGCTATATG+TGG - chr3.1:77593203-77593222 MS.gene06335:intron 40.0%
!! TGTGGTGCTATATGTGGTAA+TGG - chr3.1:77593209-77593228 MS.gene06335:intron 40.0%
!!! AAGAAGCTTCCACTTTTTCC+AGG + chr3.1:77594142-77594161 None:intergenic 40.0%
!!! GAAGGTTCTGGAACTTTTGT+TGG - chr3.1:77593014-77593033 MS.gene06335:intron 40.0%
!!! GATGTTTGTATTTTGGTGGG+GGG - chr3.1:77594004-77594023 MS.gene06335:intron 40.0%
!!! TTCTGGAACTTTTGTTGGTG+TGG - chr3.1:77593019-77593038 MS.gene06335:intron 40.0%
!!! TTGCATTTGTGTTTTGGTGG+TGG + chr3.1:77592710-77592729 None:intergenic 40.0%
AAAGGTAAAGCATGGGGGAA+AGG - chr3.1:77592933-77592952 MS.gene06335:CDS 45.0%
AACGATGGATGCATGTACCA+AGG - chr3.1:77592900-77592919 MS.gene06335:CDS 45.0%
AAGGTAAAGCATGGGGGAAA+GGG - chr3.1:77592934-77592953 MS.gene06335:CDS 45.0%
ACGTATTTACCTTTGCCGTG+TGG + chr3.1:77592876-77592895 None:intergenic 45.0%
ACTCACAGAAACCCTCTTCT+TGG + chr3.1:77593357-77593376 None:intergenic 45.0%
ATACCAGAGGACCTCTAATC+CGG - chr3.1:77596131-77596150 MS.gene06335:CDS 45.0%
ATAGAGCAATGGTGGTTGGT+AGG - chr3.1:77595889-77595908 MS.gene06335:CDS 45.0%
ATAGCAAGCATGTAATCGGC+AGG + chr3.1:77594085-77594104 None:intergenic 45.0%
CAAACCTATTGGAGGCCAAA+AGG - chr3.1:77594474-77594493 MS.gene06335:CDS 45.0%
CCATCAGGAGCTACTTATGA+AGG - chr3.1:77592969-77592988 MS.gene06335:intron 45.0%
CCTTCATAAGTAGCTCCTGA+TGG + chr3.1:77592972-77592991 None:intergenic 45.0%
CGATGGGGATGTTAAGAAAC+CGG - chr3.1:77593580-77593599 MS.gene06335:intron 45.0%
CTATTGGAGGCCAAAAGGTA+TGG - chr3.1:77594479-77594498 MS.gene06335:CDS 45.0%
GAAAGAGAGCCCAAGAGAAA+CGG + chr3.1:77596047-77596066 None:intergenic 45.0%
GAATGTGGATTCATGGGACA+TGG - chr3.1:77595413-77595432 MS.gene06335:intron 45.0%
GACAACCGATAAACTCCGTA+AGG - chr3.1:77594678-77594697 MS.gene06335:CDS 45.0%
GACCATGAGATGAACCTTTG+AGG + chr3.1:77594657-77594676 None:intergenic 45.0%
GACCTCAAAGGTTCATCTCA+TGG - chr3.1:77594652-77594671 MS.gene06335:CDS 45.0%
GAGGTGCAATTTGCAAGATG+GGG - chr3.1:77593136-77593155 MS.gene06335:intron 45.0%
GATGCATGTACCAAGGAGAA+TGG - chr3.1:77592907-77592926 MS.gene06335:CDS 45.0%
GATGGGGATGTTAAGAAACC+GGG - chr3.1:77593581-77593600 MS.gene06335:intron 45.0%
GCAATTTGCAAGATGGGGAA+GGG - chr3.1:77593141-77593160 MS.gene06335:intron 45.0%
GGAAGAAAGGTAAAGCATGG+GGG - chr3.1:77592928-77592947 MS.gene06335:CDS 45.0%
GGAAGTGAATCAGAGATTGG+TGG - chr3.1:77593500-77593519 MS.gene06335:intron 45.0%
GTAAACTTGGAACCTTCTGG+AGG + chr3.1:77593859-77593878 None:intergenic 45.0%
GTGTTTCATCAGGGAATTGG+GGG - chr3.1:77593324-77593343 MS.gene06335:intron 45.0%
GTTTCTGTGAGTGTGGATGA+TGG - chr3.1:77593365-77593384 MS.gene06335:intron 45.0%
GTTTGACACAATGAACTCCC+AGG + chr3.1:77594459-77594478 None:intergenic 45.0%
TATTTCCACCTGAACACCAC+GGG + chr3.1:77593925-77593944 None:intergenic 45.0%
TCCCCATCGATCGAATAACA+AGG + chr3.1:77593569-77593588 None:intergenic 45.0%
TCTCTTCTGCTTTCATCCAC+CGG - chr3.1:77595494-77595513 MS.gene06335:CDS 45.0%
TGATAGAGACTGTGAGTTCC+TGG - chr3.1:77594885-77594904 MS.gene06335:intron 45.0%
TGCAATTTGCAAGATGGGGA+AGG - chr3.1:77593140-77593159 MS.gene06335:intron 45.0%
TGTGGTCCATCTCAACAAAC+AGG + chr3.1:77595753-77595772 None:intergenic 45.0%
TTGAGGGAAATGTCTTCTCC+TGG - chr3.1:77594121-77594140 MS.gene06335:CDS 45.0%
TTTATTTCAGGGGCCATGGA+AGG - chr3.1:77592996-77593015 MS.gene06335:intron 45.0%
! AAGGGAAAGGTGTGTTTACG+TGG - chr3.1:77593291-77593310 MS.gene06335:intron 45.0%
! AGGTGTTTTTCTACTGGCGT+CGG + chr3.1:77592810-77592829 None:intergenic 45.0%
! ATGGTGATGTGTATGAGGGT+TGG - chr3.1:77593111-77593130 MS.gene06335:intron 45.0%
! CATACCTTTTGGCCTCCAAT+AGG + chr3.1:77594481-77594500 None:intergenic 45.0%
! CTCGTTGGTTACGAAATTCC+TGG - chr3.1:77594438-77594457 MS.gene06335:CDS 45.0%
! GAGAGTGTGTAAAGCTGGAT+TGG - chr3.1:77596183-77596202 MS.gene06335:CDS 45.0%
! GGAACTTTTGTTGGTGTGGA+AGG - chr3.1:77593023-77593042 MS.gene06335:intron 45.0%
! GGAATCGTTATGTGGGTTGT+TGG - chr3.1:77593252-77593271 MS.gene06335:intron 45.0%
! GGAGGTATATGTGGAGGAAT+GGG - chr3.1:77593162-77593181 MS.gene06335:intron 45.0%
! GGAGGTGCAATTTGCAAGAT+GGG - chr3.1:77593135-77593154 MS.gene06335:intron 45.0%
! GGAGTGTTTCATCAGGGAAT+TGG - chr3.1:77593321-77593340 MS.gene06335:intron 45.0%
! TATGTGGGTTGTTGGGAGAA+TGG - chr3.1:77593260-77593279 MS.gene06335:intron 45.0%
! TGGAGGTGCAATTTGCAAGA+TGG - chr3.1:77593134-77593153 MS.gene06335:intron 45.0%
! TTAATTCCCAGCCGGATTAG+AGG + chr3.1:77596145-77596164 None:intergenic 45.0%
! TTGTGTTGGGAAGCATGCTT+CGG - chr3.1:77593774-77593793 MS.gene06335:intron 45.0%
! TTTGCTACTTGCATGCGCAT+GGG + chr3.1:77595631-77595650 None:intergenic 45.0%
!! GAATCAGAGATTGGTGGTGT+TGG - chr3.1:77593506-77593525 MS.gene06335:intron 45.0%
!! GGATGATGGTTCTAAGAGTG+TGG - chr3.1:77593379-77593398 MS.gene06335:intron 45.0%
!! GTGATGGGAGTGTTTCATCA+GGG - chr3.1:77593315-77593334 MS.gene06335:intron 45.0%
!! GTGTTGGTGTTGGTGATGTA+GGG - chr3.1:77593522-77593541 MS.gene06335:intron 45.0%
!!! TCTTAGTTTTGCCTTTCGCC+TGG - chr3.1:77594735-77594754 MS.gene06335:intron 45.0%
AATGGTGTGCCGAAAGGGAA+AGG - chr3.1:77593278-77593297 MS.gene06335:intron 50.0%
ATCAACGGCTGAGATGGATG+TGG + chr3.1:77596362-77596381 None:intergenic 50.0%
ATCCTGATGAGCACCTGACA+TGG + chr3.1:77594379-77594398 None:intergenic 50.0%
ATCTCACCGCTACTCTCTGA+AGG + chr3.1:77596241-77596260 None:intergenic 50.0%
ATGACACTCAGGACACGAGA+TGG - chr3.1:77595129-77595148 MS.gene06335:intron 50.0%
ATGGAAAGACTACTGTCCCG+TGG - chr3.1:77593906-77593925 MS.gene06335:intron 50.0%
ATTTGCAAGATGGGGAAGGG+AGG - chr3.1:77593144-77593163 MS.gene06335:intron 50.0%
CCATTATTCCCTCTGCTTCC+AGG + chr3.1:77594906-77594925 None:intergenic 50.0%
CCTGGAAGCAGAGGGAATAA+TGG - chr3.1:77594903-77594922 MS.gene06335:CDS 50.0%
CTCTTCTGCTTTCATCCACC+GGG - chr3.1:77595495-77595514 MS.gene06335:CDS 50.0%
CTGGCATGTTAATTCCCAGC+CGG + chr3.1:77596153-77596172 None:intergenic 50.0%
CTTGAAACCAAGACTGCTCC+AGG + chr3.1:77594756-77594775 None:intergenic 50.0%
GAAGAGGGTTTCTGTGAGTG+TGG - chr3.1:77593358-77593377 MS.gene06335:intron 50.0%
GACACGAGATGGATACCCAT+AGG - chr3.1:77595140-77595159 MS.gene06335:intron 50.0%
GCGCATGCAAGTAGCAAAGA+GGG - chr3.1:77595633-77595652 MS.gene06335:CDS 50.0%
GGATTGGATCAGCAGCAAAC+TGG - chr3.1:77596199-77596218 MS.gene06335:CDS 50.0%
GGCGTAAACTTGGAACCTTC+TGG + chr3.1:77593862-77593881 None:intergenic 50.0%
GGGAAATTCTCATGGCCATC+AGG - chr3.1:77592954-77592973 MS.gene06335:CDS 50.0%
GGGGAATGATGCCAAGAAGA+GGG - chr3.1:77593343-77593362 MS.gene06335:intron 50.0%
GGGGGAAAGGGAAATTCTCA+TGG - chr3.1:77592946-77592965 MS.gene06335:CDS 50.0%
GTGATGTGTATGAGGGTTGG+TGG - chr3.1:77593114-77593133 MS.gene06335:intron 50.0%
GTGTGTTTACGTGGCGTGAT+GGG - chr3.1:77593300-77593319 MS.gene06335:intron 50.0%
GTTTACGCCTCCCCATCAAT+CGG - chr3.1:77593873-77593892 MS.gene06335:intron 50.0%
TCAACGGCTGAGATGGATGT+GGG + chr3.1:77596361-77596380 None:intergenic 50.0%
TCTACCCCTTCAGAGAGTAG+CGG - chr3.1:77596232-77596251 MS.gene06335:CDS 50.0%
TCTCACCGCTACTCTCTGAA+GGG + chr3.1:77596240-77596259 None:intergenic 50.0%
TCTCCTGATCTAAGCTCTCG+AGG + chr3.1:77593802-77593821 None:intergenic 50.0%
TGCGCATGCAAGTAGCAAAG+AGG - chr3.1:77595632-77595651 MS.gene06335:CDS 50.0%
TGGACAAGGTTTCCTCCAGA+AGG - chr3.1:77593844-77593863 MS.gene06335:intron 50.0%
TGTATACGTCGCCGTTTGGA+AGG + chr3.1:77592830-77592849 None:intergenic 50.0%
TGTGAGTTCCTGGAAGCAGA+GGG - chr3.1:77594895-77594914 MS.gene06335:intron 50.0%
! AAATCCACCGATTGATGGGG+AGG + chr3.1:77593883-77593902 None:intergenic 50.0%
! AAGAGTGCATACCGGCCTAT+GGG + chr3.1:77595158-77595177 None:intergenic 50.0%
! ATGGGGAAGGGAGGTATATG+TGG - chr3.1:77593153-77593172 MS.gene06335:intron 50.0%
! CTTTGCTACTTGCATGCGCA+TGG + chr3.1:77595632-77595651 None:intergenic 50.0%
! GGGAGGTATATGTGGAGGAA+TGG - chr3.1:77593161-77593180 MS.gene06335:intron 50.0%
! GTTGGTAGGACTTGAGGCTT+AGG - chr3.1:77595903-77595922 MS.gene06335:CDS 50.0%
! TTGATGGGGAGGCGTAAACT+TGG + chr3.1:77593872-77593891 None:intergenic 50.0%
!! ATGGTGGTTGGTAGGACTTG+AGG - chr3.1:77595897-77595916 MS.gene06335:CDS 50.0%
!! ATGTGTATGAGGGTTGGTGG+AGG - chr3.1:77593117-77593136 MS.gene06335:intron 50.0%
!! CGTGATGGGAGTGTTTCATC+AGG - chr3.1:77593314-77593333 MS.gene06335:intron 50.0%
!! GAGATTGGTGGTGTTGGTGT+TGG - chr3.1:77593512-77593531 MS.gene06335:intron 50.0%
!! GATTAGTTGGTGGCCATGTC+AGG - chr3.1:77594363-77594382 MS.gene06335:CDS 50.0%
!! GGTGTTGGTGATGTAGGGTA+TGG - chr3.1:77593527-77593546 MS.gene06335:intron 50.0%
!! GGTGTTGGTGTTGGTGATGT+AGG - chr3.1:77593521-77593540 MS.gene06335:intron 50.0%
ACTACTGTCCCGTGGTGTTC+AGG - chr3.1:77593914-77593933 MS.gene06335:intron 55.0%
AGAGGACCTCTAATCCGGCT+GGG - chr3.1:77596136-77596155 MS.gene06335:CDS 55.0%
CAACGGCTGAGATGGATGTG+GGG + chr3.1:77596360-77596379 None:intergenic 55.0%
CCAAACGGCGACGTATACAG+TGG - chr3.1:77592831-77592850 MS.gene06335:CDS 55.0%
CCACTGTATACGTCGCCGTT+TGG + chr3.1:77592834-77592853 None:intergenic 55.0%
CGAGATGGATACCCATAGGC+CGG - chr3.1:77595144-77595163 MS.gene06335:intron 55.0%
CTGTGAGTTCCTGGAAGCAG+AGG - chr3.1:77594894-77594913 MS.gene06335:intron 55.0%
CTTGGGATCAACGGCTGAGA+TGG + chr3.1:77596368-77596387 None:intergenic 55.0%
GGAAACACACCACACGGCAA+AGG - chr3.1:77592864-77592883 MS.gene06335:CDS 55.0%
GGGAGAATGGTGTGCCGAAA+GGG - chr3.1:77593273-77593292 MS.gene06335:intron 55.0%
GGGGGAATGATGCCAAGAAG+AGG - chr3.1:77593342-77593361 MS.gene06335:intron 55.0%
GGTGTGTTTACGTGGCGTGA+TGG - chr3.1:77593299-77593318 MS.gene06335:intron 55.0%
GTGCCTCGAGAGCTTAGATC+AGG - chr3.1:77593796-77593815 MS.gene06335:intron 55.0%
TGGGAGAATGGTGTGCCGAA+AGG - chr3.1:77593272-77593291 MS.gene06335:intron 55.0%
! CTCACCGCTACTCTCTGAAG+GGG + chr3.1:77596239-77596258 None:intergenic 55.0%
! GAAGAGTGCATACCGGCCTA+TGG + chr3.1:77595159-77595178 None:intergenic 55.0%
! GCGGAGAGAGTGTGTAAAGC+TGG - chr3.1:77596178-77596197 MS.gene06335:CDS 55.0%
! GGGAAGGGAGGTATATGTGG+AGG - chr3.1:77593156-77593175 MS.gene06335:intron 55.0%
ACTGTCCCGTGGTGTTCAGG+TGG - chr3.1:77593917-77593936 MS.gene06335:intron 60.0%
CACACTCTCTCCGCTCTTGC+TGG + chr3.1:77596172-77596191 None:intergenic 60.0%
CAGAGGACCTCTAATCCGGC+TGG - chr3.1:77596135-77596154 MS.gene06335:CDS 60.0%
CCAAGACTGCTCCAGGCGAA+AGG + chr3.1:77594749-77594768 None:intergenic 60.0%
CCTTTCGCCTGGAGCAGTCT+TGG - chr3.1:77594746-77594765 MS.gene06335:intron 60.0%
GGCCATGTCAGGTGCTCATC+AGG - chr3.1:77594374-77594393 MS.gene06335:CDS 60.0%
TACGCCTCCCCATCAATCGG+TGG - chr3.1:77593876-77593895 MS.gene06335:intron 60.0%
TCAGGGGCCATGGAAGGTTC+TGG - chr3.1:77593002-77593021 MS.gene06335:intron 60.0%
TGGGAGCTTGATGGGGAAGC+TGG - chr3.1:77593422-77593441 MS.gene06335:intron 60.0%
! CAGCCGGATTAGAGGTCCTC+TGG + chr3.1:77596137-77596156 None:intergenic 60.0%
GCCGTCGACCACCGCGAACA+CGG - chr3.1:77592775-77592794 MS.gene06335:CDS 70.0%
GCCGTGTTCGCGGTGGTCGA+CGG + chr3.1:77592779-77592798 None:intergenic 70.0%
GGTGACACGCGCCGTGTTCG+CGG + chr3.1:77592789-77592808 None:intergenic 70.0%
GTTCGCGGTGGTCGACGGCA+TGG + chr3.1:77592774-77592793 None:intergenic 70.0%
GACACGCGCCGTGTTCGCGG+TGG + chr3.1:77592786-77592805 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 77592675 77596444 77592675 ID=MS.gene06335
chr3.1 mRNA 77592675 77596444 77592675 ID=MS.gene06335.t1;Parent=MS.gene06335
chr3.1 exon 77595453 77596444 77595453 ID=MS.gene06335.t1.exon1;Parent=MS.gene06335.t1
chr3.1 CDS 77595453 77596444 77595453 ID=cds.MS.gene06335.t1;Parent=MS.gene06335.t1
chr3.1 exon 77595184 77595348 77595184 ID=MS.gene06335.t1.exon2;Parent=MS.gene06335.t1
chr3.1 CDS 77595184 77595348 77595184 ID=cds.MS.gene06335.t1;Parent=MS.gene06335.t1
chr3.1 exon 77594900 77595065 77594900 ID=MS.gene06335.t1.exon3;Parent=MS.gene06335.t1
chr3.1 CDS 77594900 77595065 77594900 ID=cds.MS.gene06335.t1;Parent=MS.gene06335.t1
chr3.1 exon 77594624 77594734 77594624 ID=MS.gene06335.t1.exon4;Parent=MS.gene06335.t1
chr3.1 CDS 77594624 77594734 77594624 ID=cds.MS.gene06335.t1;Parent=MS.gene06335.t1
chr3.1 exon 77594334 77594527 77594334 ID=MS.gene06335.t1.exon5;Parent=MS.gene06335.t1
chr3.1 CDS 77594334 77594527 77594334 ID=cds.MS.gene06335.t1;Parent=MS.gene06335.t1
chr3.1 exon 77594110 77594240 77594110 ID=MS.gene06335.t1.exon6;Parent=MS.gene06335.t1
chr3.1 CDS 77594110 77594240 77594110 ID=cds.MS.gene06335.t1;Parent=MS.gene06335.t1
chr3.1 exon 77593954 77594011 77593954 ID=MS.gene06335.t1.exon7;Parent=MS.gene06335.t1
chr3.1 CDS 77593954 77594011 77593954 ID=cds.MS.gene06335.t1;Parent=MS.gene06335.t1
chr3.1 exon 77592675 77592981 77592675 ID=MS.gene06335.t1.exon8;Parent=MS.gene06335.t1
chr3.1 CDS 77592675 77592981 77592675 ID=cds.MS.gene06335.t1;Parent=MS.gene06335.t1
Gene Sequence

>MS.gene06335

ATGCAAGAAACATTATTAACTATTTCGGAGCACCACCACCAAAACACAAATGCAAAGAAAAACGAGGAAATGGAAGTAGTAATAGTATCATCATCACCATGCCGTCGACCACCGCGAACACGGCGCGTGTCACCGACGCCAGTAGAAAAACACCTTCCAAACGGCGACGTATACAGTGGAAGTTTATCAGGAAACACACCACACGGCAAAGGTAAATACGTATGGAACGATGGATGCATGTACCAAGGAGAATGGAAGAAAGGTAAAGCATGGGGGAAAGGGAAATTCTCATGGCCATCAGGAGCTACTTATGAAGGTGATTTTATTTCAGGGGCCATGGAAGGTTCTGGAACTTTTGTTGGTGTGGAAGGTGATACTTATAAAGGTTCTTGGGTTTCTGATAGGAAACATGGGTTTGGTGAGAAATGTTATGCTAATGGTGATGTGTATGAGGGTTGGTGGAGGTGCAATTTGCAAGATGGGGAAGGGAGGTATATGTGGAGGAATGGGAATGAGTATGTTGGTGAATGGAAATGTGGTGCTATATGTGGTAATGGTGTTTTAATTTGGAAGAATGGGAATCGTTATGTGGGTTGTTGGGAGAATGGTGTGCCGAAAGGGAAAGGTGTGTTTACGTGGCGTGATGGGAGTGTTTCATCAGGGAATTGGGGGAATGATGCCAAGAAGAGGGTTTCTGTGAGTGTGGATGATGGTTCTAAGAGTGTGGTTTTTCCTAGGATTTGTATTTGGGAGCTTGATGGGGAAGCTGGTGATATTACTTGTGATATTGTTGATAATGTGGAAGCTTGTATGTTTTATAGAGATGGAAGTGAATCAGAGATTGGTGGTGTTGGTGTTGGTGATGTAGGGTATGGACATTCACAGAAGAGTCCTTGTTATTCGATCGATGGGGATGTTAAGAAACCGGGTTATACTGTTTGTAAGGGACATAAGAACTATGATTTGATTCTTAATCTTCAATTGGGTATTAGGTGTGTTGTTTTGTGTTATCTACATTGTTAGTTTGGATTTGGATTTGGTTTATTTTTATGTGTTTGGCGTTTTTAATAAGATTGTGGTTTTGTTTTTGTTTTAGATATTGTGTTGGGAAGCATGCTTCGGTGCCTCGAGAGCTTAGATCAGGAGATTTTGATCCAAAGGAGAAATTCTGGACAAGGTTTCCTCCAGAAGGTTCCAAGTTTACGCCTCCCCATCAATCGGTGGATTTTAGATGGAAAGACTACTGTCCCGTGGTGTTCAGGTGGAAATAATATCTGAATCAATTTTCTTATATGTTGATTGTTTAATTGATGTTATGTGTGTATTAATGATGTTTGTATTTTGGTGGGGGGTTGTTTGTTTCTTTGTTGGGTATTTAGGCATTTGAGGGAATTATTTGCGATTGATCCTGCCGATTACATGCTTGCTATTTGTGGCAATGATACGTTGAGGGAAATGTCTTCTCCTGGAAAAAGTGGAAGCTTCTTTTACCTTACTCAAGATGACCGATTTGTAATCAAAACCTTGAAGAAGTCTGAAGTCAAGGTTAGTTGTTAGTTCCTAGCCTTAATTAATTACTAGACTTGAAAAAGCATTATGTTTGATGAGAAAAGTATAAAACCTATATTGAGCAAGGTGAAATTTCAATCACAGCTTTTAGTCACTATGCTTTTTTCCTCTGTTTCAATGATTAGTTGGTGGCCATGTCAGGTGCTCATCAGGATGCTTCCCAGTTACTATCAACATGTTTCTCAGTACAAGAACTCGTTGGTTACGAAATTCCTGGGAGTTCATTGTGTCAAACCTATTGGAGGCCAAAAGGTATGGACTACCTAGTTTAAATTTTGCACTGAACTGATGTACTATATGAATGTTTGTAATAATATAATGAATACTTGTATTGCTATGGAAAAACAGACCCGATTTATTGTAATGGGCAATGTGTTTTGTTCGGAGTATCGAATTCATAAGCGATTTGACCTCAAAGGTTCATCTCATGGTCGGACAACCGATAAACTCCGTAAGGATATTGATGAGACTACTACTCTTAAAGACCTTGATCTTAGTTTTGCCTTTCGCCTGGAGCAGTCTTGGTTTCAAGAGCTAAAATGGTACAGAATTTACGTCCTTGTGTAAAGTTTCTTTCACTTTTAGCATTTTTATGATGTTCTTAGAGTTGGTCTTTTGTAATGATTTTTGCTCAGGCAACTTGATAGAGACTGTGAGTTCCTGGAAGCAGAGGGAATAATGGACTACAGTTTTCTCATTGGCCTTCATTTTCGTGATGATTACTCATCGGATGAAATGAAAAGTTCACCTAATGAATTGTGTTCTGGTATGTGTCTTCTTGCTTCCTCCTAGTTCCATGTTTCCTTTCATGTGAATTTGTCCGATCCAAGGGTTAAAAGATTTGTGGGATTATGGTTTTTGCAGGCAAGAGAGACATGCAAAATGATGACACTCAGGACACGAGATGGATACCCATAGGCCGGTATGCACTCTTCACTTTATCACCGTATCTGATTGTTTTTGTTGTTTCAGCTTGGTGAATAAATCCTTGTGAAATTATAAAAATTTACTGCTAAGATTGTCTTCCTTGAATTTTCCATATTTAGTCCCAAAGAGATAAGTTTTGAGGATTTAGAAATGCTGGTGCGGTTCTACTATTAGCTTAAGCTGTTATGTGAATTCCAACCCATCATTTATTGATTTGTTCTAGAAATCAAAGTCACTTATGGGAATGTGGATTCATGGGACATGGACCATTTTTTATTGCTACATTTTATGAAAAGATTATTCATTTAGGATATAGCAGTTTGTCTCTTCTGCTTTCATCCACCGGGTCATTTCTTTTACTTTTATGCATGTGCCATGTTCTTGAGCTTTAGTCTATCTGGACCCGCCATAATGCAAATAGAAGCAAAATGCTTCCACCCTAAACTAGCAATATTGGCCCATGCGCATGCAAGTAGCAAAGAGGGATATGAACCACTACTAGTCATGTAGAAATAAAGCAGTGGCAGATGAATTAGCATTCTCCAGTCCTCTATCTGTGATTTAGAAGTGACATATGCTCCTGTTTGTTGAGATGGACCACAATGACTTGATTTGTCATGGCCAATGTTATAGTAAGTTTTTTTGACAACAAATGCTGGAGTGGTCGTTTGAGCAGAACCTTCTCTGTAAAGCTATTTGTTAGTTGACAATGATATTGATAGAGCAATGGTGGTTGGTAGGACTTGAGGCTTAGGAAATACATTTGTGTGCCAGTTACATATAAATATTGACATTTTTTCTGATATACATTACTCTTTCTTTGTTAAAAATGCTAAATTCTAAACTGTATTTTAAGTCATAAGTTTTAGTAATCCGTTTCTCTTGGGCTCTCTTTCTTATGTGAGTTTACATCCTAACTATGCAGATATTTAATATTTGATTTGAATTATGATTCTTGATATACCAGAGGACCTCTAATCCGGCTGGGAATTAACATGCCAGCAAGAGCGGAGAGAGTGTGTAAAGCTGGATTGGATCAGCAGCAAACTGGAAGTAGCAAATCTACCCCTTCAGAGAGTAGCGGTGAGATCTCTGATGTAATCCTTTATTTTGGCATCATTGACATTCTCCAAGATTATGATATTAGCAAAAAGCTAGAGCATGCATACAAGTCACTACAAGTGGACCCCACATCCATCTCAGCCGTTGATCCCAAGCTATATTCCAAAAGGTTTAGGGATTTCATACACAGAATCTTTGTGGAGGACAAATAA
Protein sequence

>MS.gene06335.t1

MQETLLTISEHHHQNTNAKKNEEMEVVIVSSSPCRRPPRTRRVSPTPVEKHLPNGDVYSGSLSGNTPHGKGKYVWNDGCMYQGEWKKGKAWGKGKFSWPSGATYEGDFISGAMEGSGTFVGVEGDTYKGSWVSDRKHGFGEKCYANGDVYEGWWRCNLQDGEGRYMWRNGNEYVGEWKCGAICGNGVLIWKNGNRYVGCWENGVPKGKGVFTWRDGSVSSGNWGNDAKKRVSVSVDDGSKSVVFPRICIWELDGEAGDITCDIVDNVEACMFYRDGSESEIGGVGVGDVGYGHSQKSPCYSIDGDVKKPGYTVCKGHKNYDLILNLQLGIRYCVGKHASVPRELRSGDFDPKEKFWTRFPPEGSKFTPPHQSVDFRWKDYCPVVFRHLRELFAIDPADYMLAICGNDTLREMSSPGKSGSFFYLTQDDRFVIKTLKKSEVKVLIRMLPSYYQHVSQYKNSLVTKFLGVHCVKPIGGQKTRFIVMGNVFCSEYRIHKRFDLKGSSHGRTTDKLRKDIDETTTLKDLDLSFAFRLEQSWFQELKWQLDRDCEFLEAEGIMDYSFLIGLHFRDDYSSDEMKSSPNELCSGKRDMQNDDTQDTRWIPIGRGPLIRLGINMPARAERVCKAGLDQQQTGSSKSTPSESSGEISDVILYFGIIDILQDYDISKKLEHAYKSLQVDPTSISAVDPKLYSKRFRDFIHRIFVEDK