Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06381.t1 | XP_003602643.2 | 97.1 | 408 | 9 | 1 | 1 | 408 | 7 | 411 | 1.70E-194 | 688.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06381.t1 | Q8RX26 | 71.6 | 334 | 86 | 4 | 78 | 408 | 13 | 340 | 1.2e-132 | 474.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06381.t1 | A0A072VBP5 | 97.1 | 408 | 9 | 1 | 1 | 408 | 24 | 428 | 1.2e-194 | 688.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049267 | MS.gene06381 | 0.83205 | 1.18E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06381.t1 | MTR_3g096520 | 95.864 | 411 | 14 | 1 | 1 | 411 | 7 | 414 | 0.0 | 816 |
| MS.gene06381.t1 | MTR_3g096520 | 95.864 | 411 | 14 | 1 | 1 | 411 | 24 | 431 | 0.0 | 816 |
| MS.gene06381.t1 | MTR_3g096520 | 95.620 | 411 | 14 | 2 | 1 | 411 | 7 | 413 | 0.0 | 810 |
| MS.gene06381.t1 | MTR_3g086520 | 60.904 | 376 | 120 | 6 | 56 | 407 | 68 | 440 | 3.39e-152 | 439 |
| MS.gene06381.t1 | MTR_3g086520 | 60.904 | 376 | 120 | 6 | 56 | 407 | 71 | 443 | 4.31e-152 | 439 |
| MS.gene06381.t1 | MTR_3g086520 | 60.904 | 376 | 120 | 6 | 56 | 407 | 71 | 443 | 5.36e-152 | 439 |
| MS.gene06381.t1 | MTR_7g033100 | 61.236 | 356 | 122 | 6 | 71 | 417 | 76 | 424 | 1.22e-150 | 434 |
| MS.gene06381.t1 | MTR_6g021730 | 57.441 | 383 | 118 | 5 | 69 | 417 | 94 | 465 | 1.65e-150 | 436 |
| MS.gene06381.t1 | MTR_3g075530 | 59.945 | 362 | 119 | 5 | 71 | 417 | 64 | 414 | 7.39e-150 | 432 |
| MS.gene06381.t1 | MTR_8g089670 | 58.904 | 365 | 131 | 4 | 57 | 407 | 89 | 448 | 9.51e-148 | 428 |
| MS.gene06381.t1 | MTR_7g033100 | 69.176 | 279 | 83 | 1 | 79 | 357 | 84 | 359 | 1.60e-141 | 410 |
| MS.gene06381.t1 | MTR_2g063857 | 60.059 | 338 | 123 | 3 | 74 | 411 | 67 | 392 | 2.07e-140 | 407 |
| MS.gene06381.t1 | MTR_2g063907 | 58.739 | 349 | 121 | 4 | 73 | 413 | 52 | 385 | 8.90e-138 | 400 |
| MS.gene06381.t1 | MTR_6g092020 | 58.772 | 342 | 121 | 5 | 74 | 411 | 46 | 371 | 3.98e-137 | 398 |
| MS.gene06381.t1 | MTR_2g063843 | 59.467 | 338 | 119 | 4 | 74 | 411 | 59 | 378 | 9.27e-137 | 397 |
| MS.gene06381.t1 | MTR_8g447220 | 58.757 | 354 | 129 | 5 | 61 | 411 | 43 | 382 | 2.14e-133 | 389 |
| MS.gene06381.t1 | MTR_2g063857 | 64.808 | 287 | 96 | 2 | 74 | 360 | 67 | 348 | 3.04e-132 | 385 |
| MS.gene06381.t1 | MTR_6g092100 | 65.493 | 284 | 91 | 3 | 77 | 360 | 4 | 280 | 1.53e-131 | 380 |
| MS.gene06381.t1 | MTR_8g447220 | 65.714 | 280 | 89 | 2 | 61 | 340 | 43 | 315 | 2.86e-124 | 362 |
| MS.gene06381.t1 | MTR_7g081160 | 56.680 | 247 | 99 | 4 | 98 | 340 | 10 | 252 | 8.64e-86 | 271 |
| MS.gene06381.t1 | MTR_7g081170 | 69.032 | 155 | 44 | 2 | 137 | 290 | 86 | 237 | 4.20e-74 | 232 |
| MS.gene06381.t1 | MTR_2g063877 | 52.252 | 111 | 40 | 2 | 157 | 267 | 3 | 100 | 9.34e-29 | 110 |
| MS.gene06381.t1 | MTR_8g096190 | 34.340 | 265 | 128 | 12 | 96 | 339 | 337 | 576 | 3.38e-22 | 99.4 |
| MS.gene06381.t1 | MTR_1g048160 | 30.034 | 293 | 155 | 11 | 81 | 354 | 319 | 580 | 1.49e-20 | 94.4 |
| MS.gene06381.t1 | MTR_8g096190 | 34.914 | 232 | 115 | 10 | 96 | 309 | 337 | 550 | 3.19e-20 | 93.2 |
| MS.gene06381.t1 | MTR_8g096190 | 34.685 | 222 | 118 | 8 | 80 | 292 | 321 | 524 | 1.22e-19 | 91.3 |
| MS.gene06381.t1 | MTR_7g114130 | 30.996 | 271 | 137 | 11 | 81 | 332 | 323 | 562 | 3.41e-19 | 90.1 |
| MS.gene06381.t1 | MTR_7g114100 | 30.435 | 276 | 145 | 10 | 73 | 332 | 149 | 393 | 3.63e-19 | 89.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06381.t1 | AT5G63970 | 68.436 | 358 | 101 | 5 | 66 | 417 | 1 | 352 | 9.51e-177 | 498 |
| MS.gene06381.t1 | AT5G63970 | 68.436 | 358 | 101 | 5 | 66 | 417 | 1 | 352 | 9.51e-177 | 498 |
| MS.gene06381.t1 | AT3G01650 | 60.165 | 364 | 126 | 5 | 62 | 417 | 116 | 468 | 1.80e-151 | 438 |
| MS.gene06381.t1 | AT3G01650 | 60.165 | 364 | 126 | 5 | 62 | 417 | 116 | 468 | 1.80e-151 | 438 |
| MS.gene06381.t1 | AT5G14420 | 57.951 | 371 | 126 | 4 | 67 | 417 | 87 | 447 | 1.05e-147 | 428 |
| MS.gene06381.t1 | AT5G14420 | 57.951 | 371 | 126 | 4 | 67 | 417 | 87 | 447 | 1.05e-147 | 428 |
| MS.gene06381.t1 | AT5G14420 | 57.951 | 371 | 126 | 4 | 67 | 417 | 87 | 447 | 1.05e-147 | 428 |
| MS.gene06381.t1 | AT5G14420 | 57.951 | 371 | 126 | 4 | 67 | 417 | 87 | 447 | 1.05e-147 | 428 |
| MS.gene06381.t1 | AT1G67800 | 55.759 | 382 | 147 | 5 | 40 | 407 | 33 | 406 | 3.56e-141 | 410 |
| MS.gene06381.t1 | AT1G67800 | 55.759 | 382 | 147 | 5 | 40 | 407 | 33 | 406 | 3.56e-141 | 410 |
| MS.gene06381.t1 | AT1G67800 | 55.759 | 382 | 147 | 5 | 40 | 407 | 33 | 406 | 3.56e-141 | 410 |
| MS.gene06381.t1 | AT1G67800 | 55.759 | 382 | 147 | 5 | 40 | 407 | 33 | 406 | 3.56e-141 | 410 |
| MS.gene06381.t1 | AT1G67800 | 55.759 | 382 | 147 | 5 | 40 | 407 | 53 | 426 | 5.45e-141 | 410 |
| MS.gene06381.t1 | AT1G79380 | 57.027 | 370 | 140 | 5 | 44 | 407 | 17 | 373 | 9.98e-139 | 402 |
| MS.gene06381.t1 | AT1G67800 | 61.059 | 321 | 114 | 3 | 40 | 357 | 53 | 365 | 5.63e-134 | 390 |
| MS.gene06381.t1 | AT1G24545 | 44.643 | 112 | 21 | 2 | 117 | 228 | 46 | 116 | 5.05e-22 | 93.2 |
| MS.gene06381.t1 | AT5G61910 | 30.182 | 275 | 135 | 12 | 102 | 356 | 1109 | 1346 | 4.28e-20 | 93.6 |
| MS.gene06381.t1 | AT5G61900 | 30.182 | 275 | 135 | 12 | 102 | 356 | 341 | 578 | 9.43e-20 | 92.0 |
| MS.gene06381.t1 | AT5G61900 | 30.182 | 275 | 135 | 12 | 102 | 356 | 341 | 578 | 9.43e-20 | 92.0 |
| MS.gene06381.t1 | AT5G07300 | 32.530 | 249 | 125 | 11 | 102 | 332 | 344 | 567 | 4.10e-19 | 90.1 |
| MS.gene06381.t1 | AT1G08860 | 30.000 | 250 | 130 | 9 | 102 | 332 | 344 | 567 | 2.05e-18 | 87.8 |
Find 99 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCAAATTCTGTTTCCTTCT+TGG | 0.060815 | 3.1:-76968894 | None:intergenic |
| TTATCCTCTCTCAATTATTT+TGG | 0.184417 | 3.1:+76967656 | MS.gene06381:CDS |
| GCGCGTATTTGACAACTTTC+AGG | 0.205094 | 3.1:+76967737 | MS.gene06381:CDS |
| CATCAACCTTCTTCTTATAC+TGG | 0.227724 | 3.1:+76965778 | MS.gene06381:CDS |
| CTCTTCTTATACCGGAAGTT+TGG | 0.232745 | 3.1:+76965831 | MS.gene06381:CDS |
| AATCCGAAGGACACGGCTTT+TGG | 0.280748 | 3.1:+76969316 | MS.gene06381:CDS |
| TTCTTCTTATACTGGGAGTT+TGG | 0.282403 | 3.1:+76965786 | MS.gene06381:CDS |
| GATAATCTGATACCATGTTT+TGG | 0.290225 | 3.1:+76966445 | MS.gene06381:CDS |
| ATGGAGATTGCTTGCTCATA+TGG | 0.297924 | 3.1:-76966391 | None:intergenic |
| CACTTTGACGATAACATTAC+TGG | 0.306302 | 3.1:+76967714 | MS.gene06381:CDS |
| ACCTGTCCACTCATTGCTTT+TGG | 0.308835 | 3.1:-76966214 | None:intergenic |
| AGACAGAGTCCGGCCAATTA+TGG | 0.312266 | 3.1:-76966410 | None:intergenic |
| ATTTGCGCTTGCTGCCCTTA+TGG | 0.316033 | 3.1:+76968910 | MS.gene06381:CDS |
| TGCTTTGAGAGAAGCTGGTT+TGG | 0.319024 | 3.1:+76966158 | MS.gene06381:CDS |
| ACTGAACTCCCATCATAATT+AGG | 0.320439 | 3.1:-76965742 | None:intergenic |
| GAGCAAGCAATCTCCATAAT+TGG | 0.320653 | 3.1:+76966397 | MS.gene06381:CDS |
| TCTTCTTATACCGGAAGTTT+GGG | 0.329348 | 3.1:+76965832 | MS.gene06381:CDS |
| TCAATTGCTGCATCAATTAC+AGG | 0.330436 | 3.1:-76967303 | None:intergenic |
| AGCCGACAATTTCAGCTCAT+TGG | 0.359139 | 3.1:+76965939 | MS.gene06381:CDS |
| GTTAGTATTCCCCAAACTTC+CGG | 0.361215 | 3.1:-76965842 | None:intergenic |
| CGGAAGAGCCTTCATCATAT+TGG | 0.365540 | 3.1:+76966346 | MS.gene06381:CDS |
| CTTCGGATTTGTTAGACAAA+TGG | 0.368918 | 3.1:-76969302 | None:intergenic |
| TTCGGATTTGTTAGACAAAT+GGG | 0.372915 | 3.1:-76969301 | None:intergenic |
| GAATCTTCAAATTTGATACT+TGG | 0.376948 | 3.1:+76966180 | MS.gene06381:CDS |
| TCGTGATCTATTATTTCCTT+AGG | 0.377030 | 3.1:-76969101 | None:intergenic |
| ATTGCTTGCTCATATGGATT+AGG | 0.378072 | 3.1:-76966385 | None:intergenic |
| AATGTACCTTGCAGCAATTA+TGG | 0.383001 | 3.1:-76967555 | None:intergenic |
| CCATGACAAACTCTATTATC+AGG | 0.398725 | 3.1:-76966596 | None:intergenic |
| GTTTCTGCTTTGAGAGAAGC+TGG | 0.409122 | 3.1:+76966153 | MS.gene06381:CDS |
| CAATTTCAGCTCATTGGATC+AGG | 0.420851 | 3.1:+76965945 | MS.gene06381:CDS |
| GTAATGGTTGCTTGTTCTTG+TGG | 0.423780 | 3.1:-76967530 | None:intergenic |
| GTTCCACATTTGAAACTGTC+AGG | 0.431306 | 3.1:+76966653 | MS.gene06381:CDS |
| TCTATTATTTCCTTAGGTGG+TGG | 0.431746 | 3.1:-76969095 | None:intergenic |
| AGCTTTCCATGCGGCGTACC+AGG | 0.440711 | 3.1:-76967503 | None:intergenic |
| TGTCATTATTGCTGATGGAC+AGG | 0.443974 | 3.1:+76967362 | MS.gene06381:CDS |
| TCTGCACTGGCTGGAGCTGT+TGG | 0.447629 | 3.1:-76969173 | None:intergenic |
| CATCCAAAAGCCGTGTCCTT+CGG | 0.449638 | 3.1:-76969319 | None:intergenic |
| CTATTATTTCCTTAGGTGGT+GGG | 0.465035 | 3.1:-76969094 | None:intergenic |
| TGTGCTGCCCGGTACTGAAA+TGG | 0.465356 | 3.1:-76968938 | None:intergenic |
| GTTCTTGTCATTATTGCTGA+TGG | 0.466502 | 3.1:+76967357 | MS.gene06381:CDS |
| CCCCAGGTTACTAGAAATCC+TGG | 0.468853 | 3.1:+76967485 | MS.gene06381:intron |
| CAACACCCTCCTAATTATGA+TGG | 0.471709 | 3.1:+76965733 | MS.gene06381:CDS |
| TGGAGATTCCATTTCAGTAC+CGG | 0.474482 | 3.1:+76968930 | MS.gene06381:CDS |
| ATCTTCACATGCTACAAGTT+CGG | 0.483413 | 3.1:+76965876 | MS.gene06381:CDS |
| ATAAGAAGAGGGTTGATCAT+AGG | 0.486114 | 3.1:-76965818 | None:intergenic |
| ATCCAATGAGCTGAAATTGT+CGG | 0.486210 | 3.1:-76965941 | None:intergenic |
| ATTTCCTTAGGTGGTGGGAG+AGG | 0.495075 | 3.1:-76969089 | None:intergenic |
| CATCAAAAGTAGACAGAGTC+CGG | 0.497235 | 3.1:-76966420 | None:intergenic |
| CTTCATCATATTGGAAGTGC+TGG | 0.500530 | 3.1:+76966355 | MS.gene06381:CDS |
| TGATCTATTATTTCCTTAGG+TGG | 0.501463 | 3.1:-76969098 | None:intergenic |
| TGCAGCAATTATGGAAGTAA+TGG | 0.506063 | 3.1:-76967546 | None:intergenic |
| CATACTGGTTCTGCACTGGC+TGG | 0.522210 | 3.1:-76969182 | None:intergenic |
| GATCAACCCTCTTCTTATAC+CGG | 0.529411 | 3.1:+76965823 | MS.gene06381:CDS |
| ATCAACCTTCTTCTTATACT+GGG | 0.532895 | 3.1:+76965779 | MS.gene06381:CDS |
| AAGACCTCTCCCACCACCTA+AGG | 0.533866 | 3.1:+76969085 | MS.gene06381:CDS |
| CAGCACTTCCAATATGATGA+AGG | 0.536975 | 3.1:-76966354 | None:intergenic |
| CAATTGCTGCATCAATTACA+GGG | 0.538242 | 3.1:-76967302 | None:intergenic |
| ACCAAAAGCAATGAGTGGAC+AGG | 0.538547 | 3.1:+76966213 | MS.gene06381:CDS |
| CTGAAATGGAATCTCCATAA+GGG | 0.542289 | 3.1:-76968924 | None:intergenic |
| AGAAATCCTGGTACGCCGCA+TGG | 0.545259 | 3.1:+76967497 | MS.gene06381:CDS |
| ATTACAGGGGCAAATGAAGT+TGG | 0.548560 | 3.1:-76967288 | None:intergenic |
| ACTGAAATGGAATCTCCATA+AGG | 0.550689 | 3.1:-76968925 | None:intergenic |
| AAACTCCCAGTATAAGAAGA+AGG | 0.556963 | 3.1:-76965784 | None:intergenic |
| CATCATAATTAGGAGGGTGT+TGG | 0.562931 | 3.1:-76965732 | None:intergenic |
| TAGGTAAGTATTCGTTCCAT+CGG | 0.563326 | 3.1:+76966326 | MS.gene06381:intron |
| TAGCATGTGAAGATGATTGA+TGG | 0.566183 | 3.1:-76965867 | None:intergenic |
| GAACTCCCATCATAATTAGG+AGG | 0.569731 | 3.1:-76965739 | None:intergenic |
| CCTGATAATAGAGTTTGTCA+TGG | 0.570822 | 3.1:+76966596 | MS.gene06381:CDS |
| GGAGATTCCATTTCAGTACC+GGG | 0.571735 | 3.1:+76968931 | MS.gene06381:CDS |
| AAGTGCTTCATCTCGTCCCA+TGG | 0.572627 | 3.1:-76967696 | None:intergenic |
| AAATTGTCGGCTATATATGC+TGG | 0.574282 | 3.1:-76965928 | None:intergenic |
| AAGCAATCTCCATAATTGGC+CGG | 0.575523 | 3.1:+76966401 | MS.gene06381:CDS |
| GAAACATACTGGTTCTGCAC+TGG | 0.575744 | 3.1:-76969186 | None:intergenic |
| TATGATGAAGGCTCTTCCGA+TGG | 0.578630 | 3.1:-76966342 | None:intergenic |
| GAATCGAAATTTGTTATGCG+TGG | 0.586429 | 3.1:-76969143 | None:intergenic |
| CAAACTTCCGGTATAAGAAG+AGG | 0.587191 | 3.1:-76965830 | None:intergenic |
| TTGGAGTTGGAGATGGACCA+TGG | 0.589444 | 3.1:+76967679 | MS.gene06381:CDS |
| ATTTCACCAAAAGCAATGAG+TGG | 0.597202 | 3.1:+76966208 | MS.gene06381:CDS |
| AACACCCTCCTAATTATGAT+GGG | 0.599452 | 3.1:+76965734 | MS.gene06381:CDS |
| TCTAACAAATCCGAAGGACA+CGG | 0.606028 | 3.1:+76969309 | MS.gene06381:CDS |
| CTTCTTATACCGGAAGTTTG+GGG | 0.608513 | 3.1:+76965833 | MS.gene06381:CDS |
| AAACTTCCGGTATAAGAAGA+GGG | 0.616560 | 3.1:-76965829 | None:intergenic |
| AACTCCCATCATAATTAGGA+GGG | 0.620871 | 3.1:-76965738 | None:intergenic |
| ACTTTGACGATAACATTACT+GGG | 0.621667 | 3.1:+76967715 | MS.gene06381:CDS |
| TGATGCAGCAATTGACATTG+TGG | 0.622992 | 3.1:+76967311 | MS.gene06381:CDS |
| TCGGATTTGTTAGACAAATG+GGG | 0.624504 | 3.1:-76969300 | None:intergenic |
| GACATTGTGGAACGAAACAA+CGG | 0.625993 | 3.1:+76967324 | MS.gene06381:CDS |
| CCATCACCAAACCCAAAACA+TGG | 0.626028 | 3.1:-76966457 | None:intergenic |
| AAACCTGACAGTTTCAAATG+TGG | 0.629100 | 3.1:-76966656 | None:intergenic |
| AAAGATCATGTCTGAGAACA+CGG | 0.629668 | 3.1:+76968865 | MS.gene06381:CDS |
| TGGAGTTGGAGATGGACCAT+GGG | 0.631244 | 3.1:+76967680 | MS.gene06381:CDS |
| CTGGTTGCTTGTTATGACGA+TGG | 0.637709 | 3.1:-76965909 | None:intergenic |
| TTACTTCCATAATTGCTGCA+AGG | 0.643987 | 3.1:+76967549 | MS.gene06381:CDS |
| CCAACCAAAATAATTGAGAG+AGG | 0.646003 | 3.1:-76967660 | None:intergenic |
| GAACACGGAAGCATCCAAGA+AGG | 0.652615 | 3.1:+76968880 | MS.gene06381:CDS |
| CATTTGTCTAACAAATCCGA+AGG | 0.659505 | 3.1:+76969303 | MS.gene06381:CDS |
| CATGTGAAGATGATTGATGG+TGG | 0.687554 | 3.1:-76965864 | None:intergenic |
| TGTGGACTAAGCTTTCCATG+CGG | 0.719964 | 3.1:-76967512 | None:intergenic |
| AATTGCTGCATCAATTACAG+GGG | 0.724712 | 3.1:-76967301 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATCCTAATATTTATTATT+AGG | - | chr3.1:76966965-76966984 | None:intergenic | 10.0% |
| !! | ATATTTGCATATTAAAAAAA+TGG | + | chr3.1:76968410-76968429 | MS.gene06381:intron | 10.0% |
| !! | TAATCCTAATAATAAATATT+AGG | + | chr3.1:76966958-76966977 | MS.gene06381:intron | 10.0% |
| !!! | TACATTAAATTCATTTTAAA+AGG | - | chr3.1:76966244-76966263 | None:intergenic | 10.0% |
| !!! | TATTTTAGTTATGATTAATT+GGG | - | chr3.1:76968172-76968191 | None:intergenic | 10.0% |
| !!! | TTATTTTAGTTATGATTAAT+TGG | - | chr3.1:76968173-76968192 | None:intergenic | 10.0% |
| !! | AAACTACAGAAATTATAAAA+TGG | - | chr3.1:76968834-76968853 | None:intergenic | 15.0% |
| !! | GCATTATAATTTATTGTATA+CGG | + | chr3.1:76966770-76966789 | MS.gene06381:intron | 15.0% |
| !!! | AAGATTAATTTTCTAAGATA+CGG | - | chr3.1:76968756-76968775 | None:intergenic | 15.0% |
| !!! | CTTTTTTATTTCTTTCAAAT+AGG | + | chr3.1:76966718-76966737 | MS.gene06381:intron | 15.0% |
| !! | AAATATTAGGATTTGATTCT+TGG | + | chr3.1:76966971-76966990 | MS.gene06381:intron | 20.0% |
| !! | ATGATTAATTGGGAAATATT+GGG | - | chr3.1:76968162-76968181 | None:intergenic | 20.0% |
| !! | GTATATGCATATATCATATA+TGG | + | chr3.1:76966261-76966280 | MS.gene06381:intron | 20.0% |
| !! | TATGATTAATTGGGAAATAT+TGG | - | chr3.1:76968163-76968182 | None:intergenic | 20.0% |
| !! | TTAACATATTCTTGTATTGA+AGG | + | chr3.1:76969273-76969292 | MS.gene06381:intron | 20.0% |
| !! | TTGATAAAGTATAACACTAA+CGG | + | chr3.1:76968246-76968265 | MS.gene06381:intron | 20.0% |
| !!! | GTTGTGGATTAATAATATAA+TGG | + | chr3.1:76968983-76969002 | MS.gene06381:intron | 20.0% |
| !!! | TTCTAGAAAAAACAATAGAA+AGG | - | chr3.1:76967452-76967471 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTGCTGTTGTTTA+TGG | + | chr3.1:76967594-76967613 | MS.gene06381:intron | 20.0% |
| ! | AAACAAAAGAAATCAGTCAT+AGG | - | chr3.1:76968384-76968403 | None:intergenic | 25.0% |
| ! | AACAAAAAGGTTAACTTAGA+AGG | - | chr3.1:76967085-76967104 | None:intergenic | 25.0% |
| ! | AACATGTAACACAAAATATC+AGG | - | chr3.1:76967146-76967165 | None:intergenic | 25.0% |
| ! | ATTTGTCGTATAAATGACAA+AGG | + | chr3.1:76967839-76967858 | MS.gene06381:intron | 25.0% |
| ! | GAATCTTCAAATTTGATACT+TGG | + | chr3.1:76966180-76966199 | MS.gene06381:CDS | 25.0% |
| ! | TCAAAAATCAAGATACGATA+CGG | - | chr3.1:76968489-76968508 | None:intergenic | 25.0% |
| ! | TTATTAATCCACAACTTACT+TGG | - | chr3.1:76968978-76968997 | None:intergenic | 25.0% |
| !! | ATAATCTGATACCATGTTTT+GGG | + | chr3.1:76966446-76966465 | MS.gene06381:CDS | 25.0% |
| !! | ATATAATGGTTCTGTATTAC+TGG | + | chr3.1:76968997-76969016 | MS.gene06381:intron | 25.0% |
| !! | TATGGTATTTGTCTTTTATG+TGG | + | chr3.1:76967612-76967631 | MS.gene06381:intron | 25.0% |
| !! | TCTAAGTTAACCTTTTTGTT+TGG | + | chr3.1:76967085-76967104 | MS.gene06381:intron | 25.0% |
| !! | TTATCCTCTCTCAATTATTT+TGG | + | chr3.1:76967656-76967675 | MS.gene06381:CDS | 25.0% |
| !!! | CTTTTATGTTGATAATGAAC+TGG | - | chr3.1:76969068-76969087 | None:intergenic | 25.0% |
| !!! | TGGATATATTGCTTCTTTTT+TGG | + | chr3.1:76968222-76968241 | MS.gene06381:intron | 25.0% |
| AACACAAAATATCAGGAGAA+AGG | - | chr3.1:76967139-76967158 | None:intergenic | 30.0% | |
| AATTGTGAGGTAACTTGAAT+TGG | + | chr3.1:76967195-76967214 | MS.gene06381:intron | 30.0% | |
| ACACTTGACAACTTATTGTT+TGG | + | chr3.1:76967045-76967064 | MS.gene06381:intron | 30.0% | |
| ACTTTGACGATAACATTACT+GGG | + | chr3.1:76967715-76967734 | MS.gene06381:CDS | 30.0% | |
| AGAAAAAACAATAGAAAGGC+AGG | - | chr3.1:76967448-76967467 | None:intergenic | 30.0% | |
| AGAAGATTTATGACACTTTC+AGG | + | chr3.1:76966128-76966147 | MS.gene06381:intron | 30.0% | |
| AGTCACTCTGTGATAATTAT+AGG | + | chr3.1:76966307-76966326 | MS.gene06381:intron | 30.0% | |
| ATACTATGGTTAGATTATGG+AGG | + | chr3.1:76968613-76968632 | MS.gene06381:intron | 30.0% | |
| ATAGAGCATATTAGCAGTAA+AGG | + | chr3.1:76965997-76966016 | MS.gene06381:intron | 30.0% | |
| ATCAACCTTCTTCTTATACT+GGG | + | chr3.1:76965779-76965798 | MS.gene06381:CDS | 30.0% | |
| ATGATTATCACAAAACAGCA+TGG | - | chr3.1:76968703-76968722 | None:intergenic | 30.0% | |
| ATTAGGTAAACCCATTTGTA+AGG | - | chr3.1:76968588-76968607 | None:intergenic | 30.0% | |
| CCTTTAATATCTCTCTACAA+AGG | - | chr3.1:76967813-76967832 | None:intergenic | 30.0% | |
| CCTTTGTAGAGAGATATTAA+AGG | + | chr3.1:76967810-76967829 | MS.gene06381:intron | 30.0% | |
| CTGATACTATGGTTAGATTA+TGG | + | chr3.1:76968610-76968629 | MS.gene06381:intron | 30.0% | |
| GCTATGTTGAATTTGTGATT+AGG | + | chr3.1:76966852-76966871 | MS.gene06381:intron | 30.0% | |
| TAACCATAGTATCAGACATT+AGG | - | chr3.1:76968605-76968624 | None:intergenic | 30.0% | |
| TAGAGAGATATTAAAGGATC+AGG | + | chr3.1:76967816-76967835 | MS.gene06381:intron | 30.0% | |
| TAGAGCATATTAGCAGTAAA+GGG | + | chr3.1:76965998-76966017 | MS.gene06381:intron | 30.0% | |
| TATCGGTGCATGATAATTAT+TGG | - | chr3.1:76968134-76968153 | None:intergenic | 30.0% | |
| TCGTGATCTATTATTTCCTT+AGG | - | chr3.1:76969104-76969123 | None:intergenic | 30.0% | |
| TGATCTATTATTTCCTTAGG+TGG | - | chr3.1:76969101-76969120 | None:intergenic | 30.0% | |
| TTACCTAATGTCTGATACTA+TGG | + | chr3.1:76968599-76968618 | MS.gene06381:intron | 30.0% | |
| TTACCTCACAATTCAAGATA+TGG | - | chr3.1:76967188-76967207 | None:intergenic | 30.0% | |
| TTTGGATGTTGGTACATAAT+AGG | + | chr3.1:76967103-76967122 | MS.gene06381:intron | 30.0% | |
| ! | AAAGAAAGCACATCATGAAA+TGG | - | chr3.1:76967416-76967435 | None:intergenic | 30.0% |
| ! | AAGAAAGCACATCATGAAAT+GGG | - | chr3.1:76967415-76967434 | None:intergenic | 30.0% |
| ! | GATAATCTGATACCATGTTT+TGG | + | chr3.1:76966445-76966464 | MS.gene06381:CDS | 30.0% |
| ! | TTTTACGTAACTTTGAGCTT+AGG | + | chr3.1:76966818-76966837 | MS.gene06381:intron | 30.0% |
| !! | AACTCCCTCATTTTTGTTAT+AGG | + | chr3.1:76967264-76967283 | MS.gene06381:intron | 30.0% |
| !! | ACTCCCTCATTTTTGTTATA+GGG | + | chr3.1:76967265-76967284 | MS.gene06381:intron | 30.0% |
| !! | TAACCTTTTTGTTTGGATGT+TGG | + | chr3.1:76967092-76967111 | MS.gene06381:intron | 30.0% |
| !! | TTCGGATTTGTTAGACAAAT+GGG | - | chr3.1:76969304-76969323 | None:intergenic | 30.0% |
| !!! | TCAATTATTTTGGTTGGAGT+TGG | + | chr3.1:76967666-76967685 | MS.gene06381:CDS | 30.0% |
| !!! | TGAGTACTGATGTTCTTTTT+TGG | + | chr3.1:76968202-76968221 | MS.gene06381:intron | 30.0% |
| AAACCTGACAGTTTCAAATG+TGG | - | chr3.1:76966659-76966678 | None:intergenic | 35.0% | |
| AAACTCCCAGTATAAGAAGA+AGG | - | chr3.1:76965787-76965806 | None:intergenic | 35.0% | |
| AAACTTCCGGTATAAGAAGA+GGG | - | chr3.1:76965832-76965851 | None:intergenic | 35.0% | |
| AAAGATCATGTCTGAGAACA+CGG | + | chr3.1:76968865-76968884 | MS.gene06381:CDS | 35.0% | |
| AACACCCTCCTAATTATGAT+GGG | + | chr3.1:76965734-76965753 | MS.gene06381:CDS | 35.0% | |
| AACTCCCATCATAATTAGGA+GGG | - | chr3.1:76965741-76965760 | None:intergenic | 35.0% | |
| AATGTACCTTGCAGCAATTA+TGG | - | chr3.1:76967558-76967577 | None:intergenic | 35.0% | |
| AATTGCTGCATCAATTACAG+GGG | - | chr3.1:76967304-76967323 | None:intergenic | 35.0% | |
| ACTGAAATGGAATCTCCATA+AGG | - | chr3.1:76968928-76968947 | None:intergenic | 35.0% | |
| ACTGAACTCCCATCATAATT+AGG | - | chr3.1:76965745-76965764 | None:intergenic | 35.0% | |
| AGAGCATATTAGCAGTAAAG+GGG | + | chr3.1:76965999-76966018 | MS.gene06381:intron | 35.0% | |
| AGGTAAGATGCCTTACAAAT+GGG | + | chr3.1:76968575-76968594 | MS.gene06381:intron | 35.0% | |
| ATCCAATGAGCTGAAATTGT+CGG | - | chr3.1:76965944-76965963 | None:intergenic | 35.0% | |
| ATCTTCACATGCTACAAGTT+CGG | + | chr3.1:76965876-76965895 | MS.gene06381:CDS | 35.0% | |
| ATTGCTTGCTCATATGGATT+AGG | - | chr3.1:76966388-76966407 | None:intergenic | 35.0% | |
| ATTTCACCAAAAGCAATGAG+TGG | + | chr3.1:76966208-76966227 | MS.gene06381:CDS | 35.0% | |
| CAATTGCTGCATCAATTACA+GGG | - | chr3.1:76967305-76967324 | None:intergenic | 35.0% | |
| CACTTTGACGATAACATTAC+TGG | + | chr3.1:76967714-76967733 | MS.gene06381:CDS | 35.0% | |
| CATAGCAGTAGAAAGATACA+GGG | - | chr3.1:76969221-76969240 | None:intergenic | 35.0% | |
| CATCAACCTTCTTCTTATAC+TGG | + | chr3.1:76965778-76965797 | MS.gene06381:CDS | 35.0% | |
| CATTTGTCTAACAAATCCGA+AGG | + | chr3.1:76969303-76969322 | MS.gene06381:CDS | 35.0% | |
| CCAACCAAAATAATTGAGAG+AGG | - | chr3.1:76967663-76967682 | None:intergenic | 35.0% | |
| CCATGACAAACTCTATTATC+AGG | - | chr3.1:76966599-76966618 | None:intergenic | 35.0% | |
| CCTGATAATAGAGTTTGTCA+TGG | + | chr3.1:76966596-76966615 | MS.gene06381:CDS | 35.0% | |
| CTATTATTTCCTTAGGTGGT+GGG | - | chr3.1:76969097-76969116 | None:intergenic | 35.0% | |
| CTGAAATGGAATCTCCATAA+GGG | - | chr3.1:76968927-76968946 | None:intergenic | 35.0% | |
| GATGTTGGTACATAATAGGA+TGG | + | chr3.1:76967107-76967126 | MS.gene06381:intron | 35.0% | |
| GTACCAACATCCAAACAAAA+AGG | - | chr3.1:76967098-76967117 | None:intergenic | 35.0% | |
| GTTCTGTATTACTGGATTCA+AGG | + | chr3.1:76969005-76969024 | MS.gene06381:intron | 35.0% | |
| GTTCTTGTCATTATTGCTGA+TGG | + | chr3.1:76967357-76967376 | MS.gene06381:CDS | 35.0% | |
| TAACTTTGAGCTTAGGATTG+AGG | + | chr3.1:76966825-76966844 | MS.gene06381:intron | 35.0% | |
| TAATTGGGAAATATTGGGAC+AGG | - | chr3.1:76968157-76968176 | None:intergenic | 35.0% | |
| TACCATAAACGCAGCAATAT+CGG | - | chr3.1:76967783-76967802 | None:intergenic | 35.0% | |
| TAGCATGTGAAGATGATTGA+TGG | - | chr3.1:76965870-76965889 | None:intergenic | 35.0% | |
| TAGGTAAGTATTCGTTCCAT+CGG | + | chr3.1:76966326-76966345 | MS.gene06381:intron | 35.0% | |
| TCAATTGCTGCATCAATTAC+AGG | - | chr3.1:76967306-76967325 | None:intergenic | 35.0% | |
| TCATAGCAGTAGAAAGATAC+AGG | - | chr3.1:76969222-76969241 | None:intergenic | 35.0% | |
| TCTATTATTTCCTTAGGTGG+TGG | - | chr3.1:76969098-76969117 | None:intergenic | 35.0% | |
| TCTTCTTATACCGGAAGTTT+GGG | + | chr3.1:76965832-76965851 | MS.gene06381:CDS | 35.0% | |
| TGCAGCAATTATGGAAGTAA+TGG | - | chr3.1:76967549-76967568 | None:intergenic | 35.0% | |
| TGGCCCTATAACAAAAATGA+GGG | - | chr3.1:76967271-76967290 | None:intergenic | 35.0% | |
| TTAACTTAGAAGGAGAGCTT+TGG | - | chr3.1:76967075-76967094 | None:intergenic | 35.0% | |
| TTACTTCCATAATTGCTGCA+AGG | + | chr3.1:76967549-76967568 | MS.gene06381:CDS | 35.0% | |
| TTCTTCTTATACTGGGAGTT+TGG | + | chr3.1:76965786-76965805 | MS.gene06381:CDS | 35.0% | |
| TTGCCATATCTTGAATTGTG+AGG | + | chr3.1:76967182-76967201 | MS.gene06381:intron | 35.0% | |
| TTGGCCCTATAACAAAAATG+AGG | - | chr3.1:76967272-76967291 | None:intergenic | 35.0% | |
| TTGTCAAGTCTAACATGTGA+AGG | - | chr3.1:76966086-76966105 | None:intergenic | 35.0% | |
| ! | AAATTGTCGGCTATATATGC+TGG | - | chr3.1:76965931-76965950 | None:intergenic | 35.0% |
| ! | AGAAAGCACATCATGAAATG+GGG | - | chr3.1:76967414-76967433 | None:intergenic | 35.0% |
| ! | ATAAGAAGAGGGTTGATCAT+AGG | - | chr3.1:76965821-76965840 | None:intergenic | 35.0% |
| ! | CTGTCTGTCTAGAATAACTA+TGG | - | chr3.1:76966748-76966767 | None:intergenic | 35.0% |
| ! | GTTTTGTGAAACTGTTCTCA+TGG | + | chr3.1:76967888-76967907 | MS.gene06381:intron | 35.0% |
| ! | TGATACGTATCGGAAAGTAT+CGG | - | chr3.1:76968033-76968052 | None:intergenic | 35.0% |
| !! | ATTTTACCGTATCGACGTAT+CGG | + | chr3.1:76968510-76968529 | MS.gene06381:intron | 35.0% |
| !! | CTTCGGATTTGTTAGACAAA+TGG | - | chr3.1:76969305-76969324 | None:intergenic | 35.0% |
| !! | GAATCGAAATTTGTTATGCG+TGG | - | chr3.1:76969146-76969165 | None:intergenic | 35.0% |
| !! | TAAATTCAGAAGCATCTGCT+TGG | - | chr3.1:76966489-76966508 | None:intergenic | 35.0% |
| !! | TAGAGTTTGTCATGGTTTTG+AGG | + | chr3.1:76966604-76966623 | MS.gene06381:CDS | 35.0% |
| !! | TCGGATTTGTTAGACAAATG+GGG | - | chr3.1:76969303-76969322 | None:intergenic | 35.0% |
| !!! | CCTCTCTCAATTATTTTGGT+TGG | + | chr3.1:76967660-76967679 | MS.gene06381:CDS | 35.0% |
| !!! | TTTTCTAAGATACGGAATGC+TGG | - | chr3.1:76968748-76968767 | None:intergenic | 35.0% |
| AAATATCAGGAGAAAGGCTG+TGG | - | chr3.1:76967133-76967152 | None:intergenic | 40.0% | |
| AAGCAATCTCCATAATTGGC+CGG | + | chr3.1:76966401-76966420 | MS.gene06381:CDS | 40.0% | |
| AATCGATGCAGCTTGAAAAG+GGG | - | chr3.1:76966028-76966047 | None:intergenic | 40.0% | |
| ACAACTTGCCAAGTAAGTTG+TGG | + | chr3.1:76968967-76968986 | MS.gene06381:intron | 40.0% | |
| ACAATCGATGCAGCTTGAAA+AGG | - | chr3.1:76966030-76966049 | None:intergenic | 40.0% | |
| ATACTCTCCTGATACGTATC+GGG | - | chr3.1:76968042-76968061 | None:intergenic | 40.0% | |
| ATCCGATATTGCTGCGTTTA+TGG | + | chr3.1:76967778-76967797 | MS.gene06381:intron | 40.0% | |
| ATGGAGATTGCTTGCTCATA+TGG | - | chr3.1:76966394-76966413 | None:intergenic | 40.0% | |
| ATTACAGGGGCAAATGAAGT+TGG | - | chr3.1:76967291-76967310 | None:intergenic | 40.0% | |
| CAAACTTCCGGTATAAGAAG+AGG | - | chr3.1:76965833-76965852 | None:intergenic | 40.0% | |
| CAACACCCTCCTAATTATGA+TGG | + | chr3.1:76965733-76965752 | MS.gene06381:CDS | 40.0% | |
| CAATCGATGCAGCTTGAAAA+GGG | - | chr3.1:76966029-76966048 | None:intergenic | 40.0% | |
| CAATTTCAGCTCATTGGATC+AGG | + | chr3.1:76965945-76965964 | MS.gene06381:CDS | 40.0% | |
| CAGCACTTCCAATATGATGA+AGG | - | chr3.1:76966357-76966376 | None:intergenic | 40.0% | |
| CAGGTAAGATGCCTTACAAA+TGG | + | chr3.1:76968574-76968593 | MS.gene06381:intron | 40.0% | |
| CATAAACGGGATTTGACACT+CGG | - | chr3.1:76969035-76969054 | None:intergenic | 40.0% | |
| CATCAAAAGTAGACAGAGTC+CGG | - | chr3.1:76966423-76966442 | None:intergenic | 40.0% | |
| CATGTGAAGATGATTGATGG+TGG | - | chr3.1:76965867-76965886 | None:intergenic | 40.0% | |
| CGCAAATTCTGTTTCCTTCT+TGG | - | chr3.1:76968897-76968916 | None:intergenic | 40.0% | |
| CTCTTCTTATACCGGAAGTT+TGG | + | chr3.1:76965831-76965850 | MS.gene06381:CDS | 40.0% | |
| CTGGTTCACTACTGCATAAA+CGG | - | chr3.1:76969049-76969068 | None:intergenic | 40.0% | |
| CTTCTTATACCGGAAGTTTG+GGG | + | chr3.1:76965833-76965852 | MS.gene06381:CDS | 40.0% | |
| CTTGGATTCTAACAAGCTAC+TGG | + | chr3.1:76966989-76967008 | MS.gene06381:intron | 40.0% | |
| GAACTCCCATCATAATTAGG+AGG | - | chr3.1:76965742-76965761 | None:intergenic | 40.0% | |
| GACATTGTGGAACGAAACAA+CGG | + | chr3.1:76967324-76967343 | MS.gene06381:CDS | 40.0% | |
| GAGCAAGCAATCTCCATAAT+TGG | + | chr3.1:76966397-76966416 | MS.gene06381:CDS | 40.0% | |
| GAGTTAGCATAGCATCAAAC+AGG | - | chr3.1:76967022-76967041 | None:intergenic | 40.0% | |
| GATACTCTCCTGATACGTAT+CGG | - | chr3.1:76968043-76968062 | None:intergenic | 40.0% | |
| GATACTTTCCGATACGTATC+AGG | + | chr3.1:76968032-76968051 | MS.gene06381:intron | 40.0% | |
| GATCAACCCTCTTCTTATAC+CGG | + | chr3.1:76965823-76965842 | MS.gene06381:CDS | 40.0% | |
| GGAAATATTGGGACAGGTAT+CGG | - | chr3.1:76968151-76968170 | None:intergenic | 40.0% | |
| GTAATGGTTGCTTGTTCTTG+TGG | - | chr3.1:76967533-76967552 | None:intergenic | 40.0% | |
| GTTAGATTATGGAGGACAGT+GGG | + | chr3.1:76968621-76968640 | MS.gene06381:intron | 40.0% | |
| GTTAGTATTCCCCAAACTTC+CGG | - | chr3.1:76965845-76965864 | None:intergenic | 40.0% | |
| TCTAACAAATCCGAAGGACA+CGG | + | chr3.1:76969309-76969328 | MS.gene06381:CDS | 40.0% | |
| TGATGCAGCAATTGACATTG+TGG | + | chr3.1:76967311-76967330 | MS.gene06381:CDS | 40.0% | |
| TGGAGATTCCATTTCAGTAC+CGG | + | chr3.1:76968930-76968949 | MS.gene06381:CDS | 40.0% | |
| TGGTTCACTACTGCATAAAC+GGG | - | chr3.1:76969048-76969067 | None:intergenic | 40.0% | |
| ! | CATCATAATTAGGAGGGTGT+TGG | - | chr3.1:76965735-76965754 | None:intergenic | 40.0% |
| ! | CGGATATAGTATAGCACTGA+TGG | + | chr3.1:76968266-76968285 | MS.gene06381:intron | 40.0% |
| ! | CTTCATCATATTGGAAGTGC+TGG | + | chr3.1:76966355-76966374 | MS.gene06381:CDS | 40.0% |
| ! | GAATGTTTTTCTTTTCCCCC+AGG | + | chr3.1:76967469-76967488 | MS.gene06381:intron | 40.0% |
| ! | GTTCCACATTTGAAACTGTC+AGG | + | chr3.1:76966653-76966672 | MS.gene06381:CDS | 40.0% |
| ! | GTTGTATATTTTGTGCTGCC+CGG | - | chr3.1:76968952-76968971 | None:intergenic | 40.0% |
| ! | TGATACGTATCGGGAAGTAT+CGG | - | chr3.1:76968102-76968121 | None:intergenic | 40.0% |
| ! | TGTCATTATTGCTGATGGAC+AGG | + | chr3.1:76967362-76967381 | MS.gene06381:CDS | 40.0% |
| !! | ACCAGGATTTCTAGTAACCT+GGG | - | chr3.1:76967489-76967508 | None:intergenic | 40.0% |
| !! | CGTCATCCACTTTGAAGTAT+CGG | - | chr3.1:76967974-76967993 | None:intergenic | 40.0% |
| !! | GATACGTATCGGAAAGTATC+GGG | - | chr3.1:76968032-76968051 | None:intergenic | 40.0% |
| !! | GTCATCCACTTTGAAGTATC+GGG | - | chr3.1:76967973-76967992 | None:intergenic | 40.0% |
| !! | TACCAGGATTTCTAGTAACC+TGG | - | chr3.1:76967490-76967509 | None:intergenic | 40.0% |
| !! | TCATCCACTTTGAAGTATCG+GGG | - | chr3.1:76967972-76967991 | None:intergenic | 40.0% |
| !!! | ATTTTGGTTGGAGTTGGAGA+TGG | + | chr3.1:76967672-76967691 | MS.gene06381:CDS | 40.0% |
| !!! | CTGATACCATGTTTTGGGTT+TGG | + | chr3.1:76966451-76966470 | MS.gene06381:CDS | 40.0% |
| ACCAAAAGCAATGAGTGGAC+AGG | + | chr3.1:76966213-76966232 | MS.gene06381:CDS | 45.0% | |
| AGCCGACAATTTCAGCTCAT+TGG | + | chr3.1:76965939-76965958 | MS.gene06381:CDS | 45.0% | |
| CCATCACCAAACCCAAAACA+TGG | - | chr3.1:76966460-76966479 | None:intergenic | 45.0% | |
| CGGAAGAGCCTTCATCATAT+TGG | + | chr3.1:76966346-76966365 | MS.gene06381:CDS | 45.0% | |
| GATACTTCCCGATACGTATC+AGG | + | chr3.1:76968101-76968120 | MS.gene06381:intron | 45.0% | |
| GCGCGTATTTGACAACTTTC+AGG | + | chr3.1:76967737-76967756 | MS.gene06381:CDS | 45.0% | |
| GGAGATTCCATTTCAGTACC+GGG | + | chr3.1:76968931-76968950 | MS.gene06381:CDS | 45.0% | |
| GGTTAGATTATGGAGGACAG+TGG | + | chr3.1:76968620-76968639 | MS.gene06381:intron | 45.0% | |
| TATGATGAAGGCTCTTCCGA+TGG | - | chr3.1:76966345-76966364 | None:intergenic | 45.0% | |
| TCCGTATCGTATCTCGTATC+CGG | + | chr3.1:76968545-76968564 | MS.gene06381:intron | 45.0% | |
| ! | ACCTGTCCACTCATTGCTTT+TGG | - | chr3.1:76966217-76966236 | None:intergenic | 45.0% |
| ! | TGTGGACTAAGCTTTCCATG+CGG | - | chr3.1:76967515-76967534 | None:intergenic | 45.0% |
| !! | CAGGATTTCTAGTAACCTGG+GGG | - | chr3.1:76967487-76967506 | None:intergenic | 45.0% |
| !! | CCAGGATTTCTAGTAACCTG+GGG | - | chr3.1:76967488-76967507 | None:intergenic | 45.0% |
| !! | CTGGTTGCTTGTTATGACGA+TGG | - | chr3.1:76965912-76965931 | None:intergenic | 45.0% |
| !! | GAAACATACTGGTTCTGCAC+TGG | - | chr3.1:76969189-76969208 | None:intergenic | 45.0% |
| !! | GTTTCTGCTTTGAGAGAAGC+TGG | + | chr3.1:76966153-76966172 | MS.gene06381:CDS | 45.0% |
| !! | TGCTTTGAGAGAAGCTGGTT+TGG | + | chr3.1:76966158-76966177 | MS.gene06381:CDS | 45.0% |
| !!! | AGCACTGATGGTGCTCTTTT+CGG | + | chr3.1:76968278-76968297 | MS.gene06381:intron | 45.0% |
| !!! | CCATGTTTTGGGTTTGGTGA+TGG | + | chr3.1:76966457-76966476 | MS.gene06381:CDS | 45.0% |
| AAGTGCTTCATCTCGTCCCA+TGG | - | chr3.1:76967699-76967718 | None:intergenic | 50.0% | |
| AGACAGAGTCCGGCCAATTA+TGG | - | chr3.1:76966413-76966432 | None:intergenic | 50.0% | |
| CATCCAAAAGCCGTGTCCTT+CGG | - | chr3.1:76969322-76969341 | None:intergenic | 50.0% | |
| CCCCAGGTTACTAGAAATCC+TGG | + | chr3.1:76967485-76967504 | MS.gene06381:intron | 50.0% | |
| CCCGGATACGAGATACGATA+CGG | - | chr3.1:76968549-76968568 | None:intergenic | 50.0% | |
| CCGTATCGTATCTCGTATCC+GGG | + | chr3.1:76968546-76968565 | MS.gene06381:intron | 50.0% | |
| GAAAGATACAGGGAGCGACA+AGG | - | chr3.1:76969211-76969230 | None:intergenic | 50.0% | |
| GAAGCCCCGATACTTCAAAG+TGG | + | chr3.1:76967965-76967984 | MS.gene06381:intron | 50.0% | |
| GGAGCGACAAGGAAACATAC+TGG | - | chr3.1:76969200-76969219 | None:intergenic | 50.0% | |
| TGGAGTTGGAGATGGACCAT+GGG | + | chr3.1:76967680-76967699 | MS.gene06381:CDS | 50.0% | |
| TTGGAGTTGGAGATGGACCA+TGG | + | chr3.1:76967679-76967698 | MS.gene06381:CDS | 50.0% | |
| ! | AAGGACACGGCTTTTGGATG+CGG | + | chr3.1:76969322-76969341 | MS.gene06381:CDS | 50.0% |
| ! | AATCCGAAGGACACGGCTTT+TGG | + | chr3.1:76969316-76969335 | MS.gene06381:CDS | 50.0% |
| ! | ACTGCACCGATACGTCGATA+CGG | - | chr3.1:76968519-76968538 | None:intergenic | 50.0% |
| ! | ATTTGCGCTTGCTGCCCTTA+TGG | + | chr3.1:76968910-76968929 | MS.gene06381:CDS | 50.0% |
| !! | ATTTCCTTAGGTGGTGGGAG+AGG | - | chr3.1:76969092-76969111 | None:intergenic | 50.0% |
| !! | GAACACGGAAGCATCCAAGA+AGG | + | chr3.1:76968880-76968899 | MS.gene06381:CDS | 50.0% |
| !! | GCACTGATGGTGCTCTTTTC+GGG | + | chr3.1:76968279-76968298 | MS.gene06381:intron | 50.0% |
| !! | GGAAAGTATCGGGCAGGTAT+CGG | - | chr3.1:76968022-76968041 | None:intergenic | 50.0% |
| AAGACCTCTCCCACCACCTA+AGG | + | chr3.1:76969085-76969104 | MS.gene06381:CDS | 55.0% | |
| AGAAATCCTGGTACGCCGCA+TGG | + | chr3.1:76967497-76967516 | MS.gene06381:CDS | 55.0% | |
| ATCTCGTATCCGGGCTTCAC+AGG | + | chr3.1:76968555-76968574 | MS.gene06381:intron | 55.0% | |
| GGCATCTTACCTGTGAAGCC+CGG | - | chr3.1:76968567-76968586 | None:intergenic | 55.0% | |
| TATCGGTGCAGGATACGCAG+GGG | - | chr3.1:76968005-76968024 | None:intergenic | 55.0% | |
| ! | GTATCGGTGCAGGATACGCA+GGG | - | chr3.1:76968006-76968025 | None:intergenic | 55.0% |
| ! | TGTGCTGCCCGGTACTGAAA+TGG | - | chr3.1:76968941-76968960 | None:intergenic | 55.0% |
| !! | CATACTGGTTCTGCACTGGC+TGG | - | chr3.1:76969185-76969204 | None:intergenic | 55.0% |
| !! | CGTATCGGAAAGTATCGGGC+AGG | - | chr3.1:76968028-76968047 | None:intergenic | 55.0% |
| AGCTTTCCATGCGGCGTACC+AGG | - | chr3.1:76967506-76967525 | None:intergenic | 60.0% | |
| !! | GGTATCGGTGCAGGATACGC+AGG | - | chr3.1:76968007-76968026 | None:intergenic | 60.0% |
| !! | TATCGGGCAGGTATCGGTGC+AGG | - | chr3.1:76968016-76968035 | None:intergenic | 60.0% |
| !! | TCTGCACTGGCTGGAGCTGT+TGG | - | chr3.1:76969176-76969195 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 76965703 | 76969384 | 76965703 | ID=MS.gene06381 |
| chr3.1 | mRNA | 76965703 | 76969384 | 76965703 | ID=MS.gene06381.t1;Parent=MS.gene06381 |
| chr3.1 | exon | 76965703 | 76965966 | 76965703 | ID=MS.gene06381.t1.exon1;Parent=MS.gene06381.t1 |
| chr3.1 | CDS | 76965703 | 76965966 | 76965703 | ID=cds.MS.gene06381.t1;Parent=MS.gene06381.t1 |
| chr3.1 | exon | 76966150 | 76966234 | 76966150 | ID=MS.gene06381.t1.exon2;Parent=MS.gene06381.t1 |
| chr3.1 | CDS | 76966150 | 76966234 | 76966150 | ID=cds.MS.gene06381.t1;Parent=MS.gene06381.t1 |
| chr3.1 | exon | 76966329 | 76966478 | 76966329 | ID=MS.gene06381.t1.exon3;Parent=MS.gene06381.t1 |
| chr3.1 | CDS | 76966329 | 76966478 | 76966329 | ID=cds.MS.gene06381.t1;Parent=MS.gene06381.t1 |
| chr3.1 | exon | 76966561 | 76966674 | 76966561 | ID=MS.gene06381.t1.exon4;Parent=MS.gene06381.t1 |
| chr3.1 | CDS | 76966561 | 76966674 | 76966561 | ID=cds.MS.gene06381.t1;Parent=MS.gene06381.t1 |
| chr3.1 | exon | 76967286 | 76967383 | 76967286 | ID=MS.gene06381.t1.exon5;Parent=MS.gene06381.t1 |
| chr3.1 | CDS | 76967286 | 76967383 | 76967286 | ID=cds.MS.gene06381.t1;Parent=MS.gene06381.t1 |
| chr3.1 | exon | 76967491 | 76967570 | 76967491 | ID=MS.gene06381.t1.exon6;Parent=MS.gene06381.t1 |
| chr3.1 | CDS | 76967491 | 76967570 | 76967491 | ID=cds.MS.gene06381.t1;Parent=MS.gene06381.t1 |
| chr3.1 | exon | 76967653 | 76967758 | 76967653 | ID=MS.gene06381.t1.exon7;Parent=MS.gene06381.t1 |
| chr3.1 | CDS | 76967653 | 76967758 | 76967653 | ID=cds.MS.gene06381.t1;Parent=MS.gene06381.t1 |
| chr3.1 | exon | 76968851 | 76968978 | 76968851 | ID=MS.gene06381.t1.exon8;Parent=MS.gene06381.t1 |
| chr3.1 | CDS | 76968851 | 76968978 | 76968851 | ID=cds.MS.gene06381.t1;Parent=MS.gene06381.t1 |
| chr3.1 | exon | 76969058 | 76969199 | 76969058 | ID=MS.gene06381.t1.exon9;Parent=MS.gene06381.t1 |
| chr3.1 | CDS | 76969058 | 76969199 | 76969058 | ID=cds.MS.gene06381.t1;Parent=MS.gene06381.t1 |
| chr3.1 | exon | 76969295 | 76969384 | 76969295 | ID=MS.gene06381.t1.exon10;Parent=MS.gene06381.t1 |
| chr3.1 | CDS | 76969295 | 76969384 | 76969295 | ID=cds.MS.gene06381.t1;Parent=MS.gene06381.t1 |
| Gene Sequence |
| Protein sequence |
