AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene064364

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064364.t1 MTR_3g053330 91.176 476 32 3 2 477 3 468 0.0 855
MS.gene064364.t1 MTR_2g023930 43.478 483 200 11 33 454 60 530 6.35e-97 303
MS.gene064364.t1 MTR_2g088000 40.808 495 201 16 35 455 81 557 1.38e-91 290
MS.gene064364.t1 MTR_4g132430 38.696 460 200 12 35 442 30 459 7.07e-87 275
MS.gene064364.t1 MTR_4g132430 51.136 264 106 4 199 442 65 325 6.43e-78 247
MS.gene064364.t1 MTR_7g110720 36.344 454 203 12 23 454 13 402 1.11e-69 228
MS.gene064364.t1 MTR_4g049760 37.470 419 206 12 88 461 100 507 1.16e-69 231
MS.gene064364.t1 MTR_7g110720 55.607 214 83 4 243 454 172 375 7.44e-67 220
MS.gene064364.t1 MTR_4g049790 38.670 406 196 14 94 462 131 520 2.17e-66 223
MS.gene064364.t1 MTR_4g047580 33.468 496 220 18 40 456 30 494 1.01e-62 213
MS.gene064364.t1 MTR_2g045360 47.863 234 107 7 234 457 185 413 1.25e-57 197
MS.gene064364.t1 MTR_7g009730 36.120 299 114 6 234 458 192 487 5.24e-46 169
MS.gene064364.t1 MTR_4g094412 40.076 262 117 7 244 468 227 485 1.77e-42 157
MS.gene064364.t1 MTR_4g094412 40.076 262 117 7 244 468 218 476 2.07e-42 157
MS.gene064364.t1 MTR_4g107970 69.767 86 26 0 235 320 153 238 6.41e-39 148
MS.gene064364.t1 MTR_4g107970 56.790 162 53 3 235 381 230 389 1.78e-38 148
MS.gene064364.t1 MTR_5g044695 72.308 65 18 0 224 288 41 105 4.41e-29 110
MS.gene064364.t1 MTR_4g007060 33.178 214 101 6 243 456 111 282 1.15e-28 115
MS.gene064364.t1 MTR_4g007060 33.178 214 101 6 243 456 145 316 1.67e-28 115
MS.gene064364.t1 MTR_6g038890 39.521 167 88 4 132 287 51 215 7.06e-28 110
MS.gene064364.t1 MTR_1g013790 47.368 95 48 1 244 336 83 177 1.62e-25 105
MS.gene064364.t1 MTR_3g106060 28.571 259 122 6 60 318 1 196 6.60e-25 104
MS.gene064364.t1 MTR_4g013260 39.416 137 72 4 192 320 262 395 1.60e-24 106
MS.gene064364.t1 MTR_4g013260 35.955 89 56 1 241 329 165 252 6.06e-13 71.2
MS.gene064364.t1 MTR_5g094430 52.564 78 36 1 243 320 235 311 7.96e-24 103
MS.gene064364.t1 MTR_5g094430 52.564 78 36 1 243 320 213 289 8.35e-24 103
MS.gene064364.t1 MTR_5g074400 47.191 89 46 1 232 320 392 479 9.54e-24 104
MS.gene064364.t1 MTR_5g074400 50.000 60 28 2 261 320 244 301 8.36e-12 67.8
MS.gene064364.t1 MTR_3g056100 52.564 78 36 1 243 320 241 317 1.67e-23 103
MS.gene064364.t1 MTR_3g056100 52.564 78 36 1 243 320 254 330 1.73e-23 103
MS.gene064364.t1 MTR_3g056100 52.564 78 36 1 243 320 398 474 1.75e-23 103
MS.gene064364.t1 MTR_5g094430 52.564 78 36 1 243 320 347 423 1.80e-23 103
MS.gene064364.t1 MTR_3g056100 52.564 78 36 1 243 320 385 461 2.00e-23 103
MS.gene064364.t1 MTR_5g097490 45.361 97 51 2 234 330 226 320 2.03e-23 102
MS.gene064364.t1 MTR_1g013760 44.444 108 59 1 245 352 125 231 4.22e-23 99.4
MS.gene064364.t1 MTR_7g011820 45.918 98 49 2 239 336 389 482 5.38e-23 102
MS.gene064364.t1 MTR_7g011820 53.333 60 26 2 261 320 229 286 4.18e-13 71.6
MS.gene064364.t1 MTR_3g031220 44.944 89 48 1 232 320 337 424 7.85e-23 101
MS.gene064364.t1 MTR_3g031220 48.333 60 29 2 261 320 199 256 1.11e-11 67.4
MS.gene064364.t1 MTR_3g009470 52.564 78 36 1 243 320 478 554 1.49e-22 101
MS.gene064364.t1 MTR_3g009470 42.683 82 44 3 261 341 281 360 9.18e-14 74.3
MS.gene064364.t1 MTR_2g105060 29.224 219 99 5 237 450 67 234 1.54e-22 96.7
MS.gene064364.t1 MTR_4g094588 35.165 182 95 5 247 415 165 336 1.68e-22 98.6
MS.gene064364.t1 MTR_7g071120 44.554 101 50 2 225 320 284 383 1.90e-22 100
MS.gene064364.t1 MTR_7g071120 42.466 73 40 2 261 333 167 237 9.75e-11 64.3
MS.gene064364.t1 MTR_2g105060 29.224 219 99 5 237 450 142 309 2.80e-22 97.8
MS.gene064364.t1 MTR_5g042920 46.988 83 43 1 238 320 298 379 4.33e-22 99.0
MS.gene064364.t1 MTR_5g042920 47.222 72 36 2 261 332 152 221 3.11e-13 72.0
MS.gene064364.t1 MTR_2g033820 48.148 81 41 1 244 324 187 266 5.93e-22 97.8
MS.gene064364.t1 MTR_4g082580 47.561 82 42 1 239 320 257 337 1.16e-21 97.1
MS.gene064364.t1 MTR_4g082580 42.500 80 43 2 261 340 146 222 3.77e-11 65.1
MS.gene064364.t1 MTR_3g104750 43.182 88 49 1 230 317 74 160 2.25e-21 91.3
MS.gene064364.t1 MTR_5g091390 49.383 81 40 1 247 327 144 223 3.16e-21 94.4
MS.gene064364.t1 MTR_7g109800 42.857 98 51 2 244 341 129 221 4.31e-21 94.0
MS.gene064364.t1 MTR_7g079010 50.575 87 39 2 244 330 125 207 4.56e-21 92.0
MS.gene064364.t1 MTR_7g080020 48.718 78 39 1 243 320 476 552 5.77e-21 96.7
MS.gene064364.t1 MTR_7g080020 46.875 64 32 2 261 324 281 342 7.27e-12 68.2
MS.gene064364.t1 MTR_7g080000 48.718 78 39 1 243 320 415 491 9.25e-21 95.9
MS.gene064364.t1 MTR_7g080000 44.928 69 36 2 256 324 230 296 4.17e-12 68.9
MS.gene064364.t1 MTR_4g122530 46.341 82 43 1 244 325 192 272 1.67e-20 94.0
MS.gene064364.t1 MTR_1g086790 40.385 104 60 2 244 346 142 244 1.70e-20 92.8
MS.gene064364.t1 MTR_5g043880 46.914 81 42 1 237 317 101 180 2.35e-20 91.3
MS.gene064364.t1 MTR_7g028415 50.667 75 36 1 249 323 82 155 2.56e-20 88.6
MS.gene064364.t1 MTR_7g028710 50.667 75 36 1 249 323 82 155 2.56e-20 88.6
MS.gene064364.t1 MTR_1g015140 49.315 73 36 1 245 317 87 158 5.66e-20 87.0
MS.gene064364.t1 MTR_8g096730 42.857 84 47 1 243 326 53 135 6.93e-20 86.7
MS.gene064364.t1 MTR_7g100510 46.988 83 43 1 238 320 339 420 8.01e-20 92.0
MS.gene064364.t1 MTR_7g100510 44.000 75 40 2 261 335 190 262 8.01e-13 70.5
MS.gene064364.t1 MTR_3g095040 50.000 74 36 1 247 320 105 177 4.91e-19 85.9
MS.gene064364.t1 MTR_1g070455 51.389 72 35 0 256 327 289 360 5.65e-19 88.6
MS.gene064364.t1 MTR_7g109600 42.857 98 47 2 242 333 29 123 6.81e-19 86.7
MS.gene064364.t1 MTR_2g016770 58.065 62 26 0 260 321 35 96 6.89e-19 85.5
MS.gene064364.t1 MTR_8g087000 46.739 92 42 2 251 341 66 151 7.65e-19 86.3
MS.gene064364.t1 MTR_8g087000 53.521 71 32 1 251 320 67 137 7.94e-19 86.3
MS.gene064364.t1 MTR_2g016770 58.065 62 26 0 260 321 27 88 8.83e-19 85.1
MS.gene064364.t1 MTR_4g094908 50.685 73 36 0 247 319 253 325 1.23e-18 87.4
MS.gene064364.t1 MTR_2g024350 41.975 81 47 0 255 335 3 83 1.24e-18 85.1
MS.gene064364.t1 MTR_8g092010 44.156 77 42 1 247 323 95 170 1.31e-18 84.0
MS.gene064364.t1 MTR_2g032030 40.000 110 65 1 227 335 233 342 1.37e-18 88.6
MS.gene064364.t1 MTR_5g016610 50.000 74 37 0 246 319 185 258 1.60e-18 85.9
MS.gene064364.t1 MTR_8g007270 46.053 76 40 1 243 318 137 211 1.77e-18 84.7
MS.gene064364.t1 MTR_2g032030 40.000 110 65 1 227 335 233 342 2.12e-18 87.8
MS.gene064364.t1 MTR_2g083870 51.429 70 34 0 251 320 71 140 2.35e-18 85.1
MS.gene064364.t1 MTR_4g130900 48.052 77 39 1 244 320 343 418 2.37e-18 87.8
MS.gene064364.t1 MTR_0117s0040 33.544 158 79 4 191 339 7 147 3.34e-18 84.3
MS.gene064364.t1 MTR_3g095080 44.737 76 41 1 243 318 127 201 4.94e-18 83.2
MS.gene064364.t1 MTR_3g095080 44.737 76 41 1 243 318 151 225 5.00e-18 84.0
MS.gene064364.t1 MTR_1g009613 43.421 76 43 0 244 319 246 321 5.87e-18 85.5
MS.gene064364.t1 MTR_4g127040 47.500 80 41 1 240 318 224 303 9.57e-18 84.3
MS.gene064364.t1 MTR_2g024380 43.210 81 46 0 255 335 246 326 1.15e-17 85.9
MS.gene064364.t1 MTR_1g099600 41.489 94 53 1 257 350 182 273 5.37e-17 82.0
MS.gene064364.t1 MTR_8g092140 44.156 77 41 2 243 318 142 217 2.06e-16 79.0
MS.gene064364.t1 MTR_1g077780 39.130 92 54 2 244 335 46 135 2.57e-16 76.3
MS.gene064364.t1 MTR_8g028565 45.946 74 40 0 257 330 152 225 3.22e-16 80.1
MS.gene064364.t1 MTR_3g108960 44.595 74 41 0 244 317 298 371 3.98e-16 80.5
MS.gene064364.t1 MTR_6g086555 46.512 86 43 3 241 324 186 270 9.81e-16 79.3
MS.gene064364.t1 MTR_7g079040 39.362 94 50 1 257 350 151 237 1.79e-15 77.8
MS.gene064364.t1 MTR_8g098945 43.056 72 41 0 259 330 128 199 5.64e-15 75.5
MS.gene064364.t1 MTR_7g062220 54.098 61 27 1 261 321 125 184 1.15e-14 75.1
MS.gene064364.t1 MTR_3g009470 42.683 82 44 3 261 341 281 360 4.59e-14 74.7
MS.gene064364.t1 MTR_4g007060 39.683 63 38 0 235 297 137 199 1.95e-13 70.5
MS.gene064364.t1 MTR_1g078260 42.466 73 40 2 247 318 234 305 3.02e-13 72.0
MS.gene064364.t1 MTR_8g067635 28.846 156 94 4 172 320 264 409 1.23e-12 70.5
MS.gene064364.t1 MTR_8g069935 32.653 98 54 1 244 329 303 400 1.67e-12 69.7
MS.gene064364.t1 MTR_3g031220 48.333 60 29 2 261 320 199 256 5.43e-12 67.8
MS.gene064364.t1 MTR_8g027860 46.575 73 32 2 259 324 135 207 8.04e-12 67.0
MS.gene064364.t1 MTR_5g067680 50.877 57 26 1 261 315 203 259 8.96e-12 67.0
MS.gene064364.t1 MTR_7g073430 43.210 81 44 1 261 339 123 203 9.41e-12 65.9
MS.gene064364.t1 MTR_8g067650 28.289 152 100 3 172 320 254 399 1.37e-11 67.0
MS.gene064364.t1 MTR_8g099350 35.593 118 58 5 222 321 83 200 2.88e-11 65.5
MS.gene064364.t1 MTR_7g073380 36.364 99 60 2 244 339 106 204 2.99e-11 64.7
MS.gene064364.t1 MTR_5g097500 34.783 92 57 3 250 340 220 309 3.85e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064364.t1 AT4G04450 40.000 495 207 19 34 453 24 503 4.61e-91 287
MS.gene064364.t1 AT4G04450 42.857 413 174 12 88 453 12 409 2.36e-89 280
MS.gene064364.t1 AT1G62300 40.638 470 220 13 35 456 84 542 8.00e-89 282
MS.gene064364.t1 AT4G22070 43.584 413 165 13 27 382 19 420 1.08e-75 247
MS.gene064364.t1 AT4G22070 43.584 413 165 13 27 382 19 420 1.08e-75 247
MS.gene064364.t1 AT4G22070 43.584 413 165 13 27 382 19 420 1.08e-75 247
MS.gene064364.t1 AT4G22070 43.584 413 165 13 27 382 19 420 1.08e-75 247
MS.gene064364.t1 AT4G01720 48.996 249 106 5 222 450 196 443 6.63e-54 188
MS.gene064364.t1 AT1G68150 40.078 257 124 8 101 356 100 327 5.06e-45 162
MS.gene064364.t1 AT5G15130 37.237 333 147 10 203 474 121 452 8.12e-45 164
MS.gene064364.t1 AT5G15130 37.237 333 147 10 203 474 163 494 9.40e-45 165
MS.gene064364.t1 AT1G18860 57.333 150 56 3 240 382 219 367 3.66e-40 152
MS.gene064364.t1 AT1G69810 33.762 311 184 8 87 382 18 321 2.25e-36 139
MS.gene064364.t1 AT1G69810 47.771 157 76 3 227 382 112 263 3.99e-34 131
MS.gene064364.t1 AT1G80840 32.569 218 98 6 237 450 119 291 1.24e-26 109
MS.gene064364.t1 AT4G31800 27.841 352 150 10 101 450 52 301 1.67e-26 109
MS.gene064364.t1 AT4G31800 31.193 218 83 5 234 450 85 236 1.19e-24 102
MS.gene064364.t1 AT2G38470 38.636 132 66 4 243 374 345 461 4.52e-24 105
MS.gene064364.t1 AT2G38470 45.205 73 37 3 248 320 173 242 8.53e-12 67.8
MS.gene064364.t1 AT1G29860 38.971 136 72 4 244 369 120 254 6.99e-24 101
MS.gene064364.t1 AT1G13960 53.012 83 38 1 238 320 234 315 7.38e-24 103
MS.gene064364.t1 AT1G13960 53.333 60 26 2 261 320 77 134 6.11e-13 70.5
MS.gene064364.t1 AT1G13960 53.012 83 38 1 238 320 387 468 9.38e-24 104
MS.gene064364.t1 AT1G13960 53.333 60 26 2 261 320 230 287 4.05e-13 72.0
MS.gene064364.t1 AT5G07100 45.361 97 47 2 240 331 121 216 2.78e-23 98.2
MS.gene064364.t1 AT5G07100 45.361 97 47 2 240 331 121 216 2.78e-23 98.2
MS.gene064364.t1 AT5G07100 45.361 97 47 2 240 331 121 216 2.78e-23 98.2
MS.gene064364.t1 AT5G07100 45.361 97 47 2 240 331 121 216 2.78e-23 98.2
MS.gene064364.t1 AT4G26640 51.282 78 37 1 243 320 188 264 3.65e-23 101
MS.gene064364.t1 AT4G26640 51.282 78 37 1 243 320 188 264 3.65e-23 101
MS.gene064364.t1 AT4G26640 51.282 78 37 1 243 320 188 264 3.65e-23 101
MS.gene064364.t1 AT4G26640 51.282 78 37 1 243 320 188 264 3.65e-23 101
MS.gene064364.t1 AT5G07100 45.361 97 47 2 240 331 214 309 4.86e-23 99.8
MS.gene064364.t1 AT5G46350 42.969 128 61 4 233 350 147 272 5.45e-23 100
MS.gene064364.t1 AT4G26640 51.282 78 37 1 243 320 324 400 6.29e-23 102
MS.gene064364.t1 AT4G26640 51.282 78 37 1 243 320 292 368 7.28e-23 101
MS.gene064364.t1 AT4G26640 51.282 78 37 1 243 320 364 440 8.93e-23 101
MS.gene064364.t1 AT2G03340 50.602 83 40 1 238 320 393 474 1.54e-22 100
MS.gene064364.t1 AT2G03340 56.667 60 24 2 261 320 251 308 1.84e-14 75.9
MS.gene064364.t1 AT2G25000 61.290 62 24 0 259 320 102 163 1.61e-22 96.3
MS.gene064364.t1 AT2G25000 61.290 62 24 0 259 320 102 163 1.61e-22 96.3
MS.gene064364.t1 AT2G25000 61.290 62 24 0 259 320 124 185 2.48e-22 96.3
MS.gene064364.t1 AT5G26170 50.685 73 35 1 246 318 99 170 3.04e-22 94.0
MS.gene064364.t1 AT2G25000 61.290 62 24 0 259 320 145 206 3.15e-22 96.7
MS.gene064364.t1 AT2G47260 45.545 101 50 2 244 340 158 257 4.26e-22 97.4
MS.gene064364.t1 AT5G41570 52.941 85 36 2 244 328 82 162 4.39e-22 93.6
MS.gene064364.t1 AT5G56270 49.398 83 41 1 238 320 465 546 4.88e-22 100
MS.gene064364.t1 AT5G56270 49.180 61 29 2 261 321 274 332 7.87e-12 68.2
MS.gene064364.t1 AT4G18170 51.948 77 36 1 244 320 156 231 6.95e-22 96.7
MS.gene064364.t1 AT2G04880 48.684 76 38 1 246 321 269 343 8.49e-22 98.2
MS.gene064364.t1 AT2G04880 33.333 129 64 4 199 320 56 169 1.04e-11 67.4
MS.gene064364.t1 AT2G04880 48.684 76 38 1 246 321 293 367 9.28e-22 98.2
MS.gene064364.t1 AT2G04880 33.333 129 64 4 199 320 56 169 9.54e-12 67.4
MS.gene064364.t1 AT5G49520 44.944 89 48 1 244 332 205 292 1.28e-21 97.1
MS.gene064364.t1 AT3G01970 42.991 107 47 2 226 319 18 123 1.29e-21 91.3
MS.gene064364.t1 AT1G64000 53.659 82 34 2 247 328 101 178 1.76e-21 92.4
MS.gene064364.t1 AT3G01080 48.718 78 39 1 243 320 289 365 3.38e-21 96.3
MS.gene064364.t1 AT3G01080 50.000 60 28 2 261 320 168 225 2.15e-11 66.2
MS.gene064364.t1 AT3G01080 48.718 78 39 1 243 320 327 403 3.56e-21 96.3
MS.gene064364.t1 AT3G01080 50.000 60 28 2 261 320 206 263 2.19e-11 66.2
MS.gene064364.t1 AT2G30250 51.282 78 37 1 243 320 311 387 4.00e-21 95.5
MS.gene064364.t1 AT2G46130 44.898 98 50 2 233 330 3 96 1.62e-20 87.0
MS.gene064364.t1 AT1G69310 44.444 81 44 1 237 317 124 203 3.66e-20 90.9
MS.gene064364.t1 AT1G69310 44.444 81 44 1 237 317 124 203 3.66e-20 90.9
MS.gene064364.t1 AT1G69310 44.444 81 44 1 237 317 124 203 3.66e-20 90.9
MS.gene064364.t1 AT5G13080 53.425 73 33 1 247 319 54 125 8.33e-20 86.3
MS.gene064364.t1 AT3G62340 53.247 77 35 1 244 320 102 177 1.95e-19 88.6
MS.gene064364.t1 AT4G30935 36.364 132 61 3 189 320 282 390 1.95e-19 91.3
MS.gene064364.t1 AT1G55600 47.436 78 40 1 244 321 291 367 7.19e-19 89.7
MS.gene064364.t1 AT2G23320 57.627 59 25 0 261 319 241 299 1.02e-18 87.4
MS.gene064364.t1 AT4G26440 40.594 101 57 2 244 344 356 453 1.16e-18 89.4
MS.gene064364.t1 AT1G29280 35.115 131 63 2 208 323 14 137 1.71e-18 85.5
MS.gene064364.t1 AT5G28650 53.968 63 29 0 256 318 258 320 2.30e-18 86.7
MS.gene064364.t1 AT4G24240 48.148 81 41 1 240 319 260 340 2.35e-18 86.7
MS.gene064364.t1 AT2G30590 45.122 82 41 1 245 322 294 375 3.07e-18 86.7
MS.gene064364.t1 AT2G44745 45.333 75 40 1 243 317 128 201 3.07e-18 84.0
MS.gene064364.t1 AT2G34830 41.748 103 59 1 226 327 180 282 5.66e-18 86.3
MS.gene064364.t1 AT2G34830 41.748 103 59 1 226 327 189 291 6.47e-18 86.3
MS.gene064364.t1 AT4G23550 44.444 81 45 0 255 335 135 215 6.48e-18 84.7
MS.gene064364.t1 AT1G30650 41.748 103 59 1 226 327 182 284 6.85e-18 86.3
MS.gene064364.t1 AT4G39410 44.737 76 41 1 243 318 206 280 7.58e-18 84.7
MS.gene064364.t1 AT5G64810 46.479 71 37 1 247 317 97 166 9.22e-18 82.0
MS.gene064364.t1 AT2G37260 42.105 95 45 3 235 326 248 335 1.05e-17 84.7
MS.gene064364.t1 AT2G37260 46.667 75 36 3 261 333 84 156 2.13e-14 74.7
MS.gene064364.t1 AT2G37260 42.105 95 45 3 235 326 250 337 1.09e-17 84.7
MS.gene064364.t1 AT2G37260 46.667 75 36 3 261 333 86 158 2.10e-14 74.7
MS.gene064364.t1 AT3G04670 52.381 63 30 0 256 318 258 320 1.14e-17 84.3
MS.gene064364.t1 AT4G01250 39.048 105 51 1 260 351 128 232 1.35e-17 83.6
MS.gene064364.t1 AT2G37260 42.105 95 45 3 235 326 330 417 1.82e-17 84.7
MS.gene064364.t1 AT2G37260 46.667 75 36 3 261 333 166 238 3.25e-14 75.1
MS.gene064364.t1 AT2G46130 41.837 98 49 3 233 330 3 92 2.35e-17 78.2
MS.gene064364.t1 AT3G58710 51.429 70 34 0 251 320 61 130 2.46e-17 82.4
MS.gene064364.t1 AT3G58710 51.429 70 34 0 251 320 62 131 2.47e-17 82.4
MS.gene064364.t1 AT4G31550 44.737 76 42 0 242 317 227 302 3.38e-17 82.8
MS.gene064364.t1 AT4G31550 44.737 76 42 0 242 317 228 303 3.38e-17 82.8
MS.gene064364.t1 AT2G24570 44.737 76 42 0 242 317 225 300 4.39e-17 82.4
MS.gene064364.t1 AT5G52830 44.156 77 43 0 254 330 159 235 2.28e-16 80.9
MS.gene064364.t1 AT1G69310 40.741 81 43 2 237 317 124 199 3.47e-15 76.3
MS.gene064364.t1 AT4G31800 28.283 198 105 5 101 297 52 213 1.63e-14 73.6
MS.gene064364.t1 AT5G45260 43.434 99 49 3 239 335 1192 1285 2.14e-14 76.6
MS.gene064364.t1 AT5G45050 43.678 87 38 1 260 335 1180 1266 5.74e-14 75.1
MS.gene064364.t1 AT5G45050 43.678 87 38 1 260 335 1152 1238 6.29e-14 75.1
MS.gene064364.t1 AT5G45050 43.678 87 38 1 260 335 1041 1127 6.31e-14 75.1
MS.gene064364.t1 AT5G43290 40.244 82 47 2 241 321 94 174 7.76e-14 72.0
MS.gene064364.t1 AT2G21900 42.424 66 37 1 255 320 104 168 3.31e-13 68.9
MS.gene064364.t1 AT2G46400 43.210 81 44 1 237 315 81 161 2.64e-12 67.8
MS.gene064364.t1 AT3G01080 50.000 60 28 2 261 320 206 263 1.19e-11 66.2
MS.gene064364.t1 AT2G40740 42.500 80 42 2 261 336 174 253 4.47e-11 64.3
MS.gene064364.t1 AT2G40740 42.500 80 42 2 261 336 183 262 5.30e-11 63.9

Find 86 sgRNAs with CRISPR-Local

Find 191 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACCTCCTTCAACCAATTT+TGG 0.147893 3.1:+40452901 MS.gene064364:CDS
TAATGGAAAACGACTAATTA+TGG 0.190758 3.1:+40449539 MS.gene064364:CDS
ACTATGCTTTATTGCAATTC+TGG 0.191922 3.1:-40453117 None:intergenic
ATAAATTTCTGAGCCAAAAT+TGG 0.226174 3.1:-40452914 None:intergenic
GCTGCATAATATGCTCTTCT+AGG 0.248057 3.1:-40450599 None:intergenic
TCCAAGGCCATTCCTGGAAA+TGG 0.312360 3.1:+40450940 MS.gene064364:CDS
GCAGCATCAATGTTACTTTC+AGG 0.317662 3.1:+40452701 MS.gene064364:CDS
GGATGTCAATGGAGAAAATA+TGG 0.325975 3.1:+40451800 MS.gene064364:CDS
TATGATTCCAAGGCCATTCC+TGG 0.344803 3.1:+40450934 MS.gene064364:CDS
GATCCACTTTCTAATATTGT+TGG 0.346118 3.1:-40452755 None:intergenic
GGCAAGATCAGAAGCTAATA+TGG 0.362767 3.1:+40451225 MS.gene064364:CDS
AGAAAGCTCGTGTCTCAGTT+AGG 0.368659 3.1:+40451203 MS.gene064364:CDS
TTAGTAGGACCATTATTGTT+TGG 0.374768 3.1:-40453079 None:intergenic
GCTCCATTTGGTGTAGGGTT+AGG 0.385260 3.1:-40449608 None:intergenic
CCTTAGCAAAACCCATTTCC+AGG 0.390273 3.1:-40450952 None:intergenic
AACAATAATGGTCCTACTAA+TGG 0.392733 3.1:+40453082 MS.gene064364:CDS
TGTAGGGTTAGGTCATTAAC+TGG 0.394243 3.1:-40449597 None:intergenic
GTATATACTTGCTTCCGAAC+TGG 0.394378 3.1:-40451890 None:intergenic
ACTTCCAATGATGGAAGTTA+TGG 0.397710 3.1:-40453047 None:intergenic
CCAAGGCCATTCCTGGAAAT+GGG 0.400787 3.1:+40450941 MS.gene064364:CDS
AAACCATCTGCACTTGTCAT+TGG 0.402705 3.1:-40452725 None:intergenic
TGCTGAAGATAGAAGTGTTT+TGG 0.402931 3.1:+40452604 MS.gene064364:CDS
TTTGTTGCTAGGAGAAATCT+TGG 0.415907 3.1:-40449765 None:intergenic
GCTGCCATAACTTCCATCAT+TGG 0.425352 3.1:+40453043 MS.gene064364:CDS
ACTAGAGCAGAAGTGAATTT+CGG 0.430200 3.1:-40453019 None:intergenic
AATTCAAATCCAAACAATAA+TGG 0.432073 3.1:+40453070 MS.gene064364:CDS
AAGAATTCACCCTTGGAACT+TGG 0.434846 3.1:-40451141 None:intergenic
TGTTGTTGATGCCATTGCTT+TGG 0.436889 3.1:-40452672 None:intergenic
ATTTGAATTACTTCCAATGA+TGG 0.439445 3.1:-40453056 None:intergenic
TCTGAGCCAAAATTGGTTGA+AGG 0.441172 3.1:-40452907 None:intergenic
GCTTATTATCGTTGCACAAT+GGG 0.441190 3.1:+40451857 MS.gene064364:CDS
CAAGCAAATAAAGCATTTCA+AGG 0.441399 3.1:+40451106 MS.gene064364:CDS
GATTTCTCCTAGCAACAAAC+TGG 0.442717 3.1:+40449769 MS.gene064364:CDS
CCCATTTCCAGGAATGGCCT+TGG 0.445899 3.1:-40450941 None:intergenic
GTTTGAGAGAGCTAATTGAT+AGG 0.446725 3.1:+40450556 MS.gene064364:CDS
TCTCCACTTGTACCATTAGT+AGG 0.450332 3.1:-40453094 None:intergenic
CTATCATCCAGTTTGTTGCT+AGG 0.450663 3.1:-40449776 None:intergenic
GTCATTTGCAATGATACTAT+AGG 0.455756 3.1:+40449456 MS.gene064364:CDS
TGACCTAACCCTACACCAAA+TGG 0.459298 3.1:+40449605 MS.gene064364:CDS
GATGCCATTGCTTTGGCTGT+TGG 0.463658 3.1:-40452665 None:intergenic
TCCAAGGGTGAATTCTTTCA+AGG 0.464827 3.1:+40451147 MS.gene064364:CDS
TCTAGTGTGATAGTTGGAAA+TGG 0.482456 3.1:-40452821 None:intergenic
CTACGTGATGATGCTCCATT+TGG 0.485074 3.1:-40449620 None:intergenic
CCAAGGGTGAATTCTTTCAA+GGG 0.492785 3.1:+40451148 MS.gene064364:CDS
TATACAAGAGAAGATTGAAA+AGG 0.493618 3.1:+40451060 MS.gene064364:CDS
GAAAGCTCGTGTCTCAGTTA+GGG 0.497941 3.1:+40451204 MS.gene064364:CDS
GTGCAACGATAATAAGCTCT+TGG 0.499916 3.1:-40451851 None:intergenic
TGGGGACTGCTTGTCCAGTT+CGG 0.502808 3.1:+40451876 MS.gene064364:CDS
GAGAAAATATGGACAGAAGA+TGG 0.503010 3.1:+40451811 MS.gene064364:CDS
GCCATTGCTTTGGCTGTTGG+TGG 0.508626 3.1:-40452662 None:intergenic
TATGGACAGAAGATGGCAAA+GGG 0.509004 3.1:+40451818 MS.gene064364:CDS
CGATAATAAGCTCTTGGACA+TGG 0.509444 3.1:-40451845 None:intergenic
AATCCAACAATATTAGAAAG+TGG 0.511191 3.1:+40452752 MS.gene064364:CDS
TCTATTAAGTATAGGTTCAA+AGG 0.511735 3.1:+40452579 MS.gene064364:intron
GTGAGATCTAGTGTGATAGT+TGG 0.515834 3.1:-40452827 None:intergenic
GCAAAACCCATTTCCAGGAA+TGG 0.518007 3.1:-40450947 None:intergenic
GGCTTTCAAACCAAGTTCCA+AGG 0.521439 3.1:+40451131 MS.gene064364:CDS
CCCTTGAAAGAATTCACCCT+TGG 0.522368 3.1:-40451148 None:intergenic
TTATGCAGCTGAAGCAGAAA+CGG 0.537748 3.1:+40450613 MS.gene064364:CDS
AGCTTATTATCGTTGCACAA+TGG 0.538266 3.1:+40451856 MS.gene064364:CDS
GATGATGCTCCATTTGGTGT+AGG 0.540710 3.1:-40449614 None:intergenic
TGGCTGTTGGTGGTAGAGCA+TGG 0.541988 3.1:-40452652 None:intergenic
ATGATGCTCCATTTGGTGTA+GGG 0.544067 3.1:-40449613 None:intergenic
AGATTTCAGATGGATGTCAA+TGG 0.544482 3.1:+40451789 MS.gene064364:intron
AATGTATCACAGATTTCAGA+TGG 0.548456 3.1:+40451779 MS.gene064364:intron
CTGCATAATATGCTCTTCTA+GGG 0.557538 3.1:-40450598 None:intergenic
ATGGTATGAATATGATTCCA+AGG 0.557677 3.1:+40450924 MS.gene064364:CDS
AAAACGACTAATTATGGATG+AGG 0.558731 3.1:+40449545 MS.gene064364:CDS
CAAATAAAGCATTTCAAGGG+TGG 0.566998 3.1:+40451110 MS.gene064364:CDS
GGACCAATGACAAGTGCAGA+TGG 0.572451 3.1:+40452722 MS.gene064364:CDS
GGTCCTACTAATGGTACAAG+TGG 0.573879 3.1:+40453091 MS.gene064364:CDS
GAAGCAACTGAAGAAAAGAA+TGG 0.574998 3.1:+40450905 MS.gene064364:CDS
TGATGCAAGGAACGAAAATG+AGG 0.583927 3.1:+40449808 MS.gene064364:CDS
GAGCCAAAATTGGTTGAAGG+AGG 0.586653 3.1:-40452904 None:intergenic
ATAGAGAATATTCTGATGCA+AGG 0.587268 3.1:+40449795 MS.gene064364:CDS
GTTGCCATGGTGTGTGAACA+AGG 0.603956 3.1:-40452782 None:intergenic
GCTTTCAAACCAAGTTCCAA+GGG 0.616257 3.1:+40451132 MS.gene064364:CDS
AAGCAAATAAAGCATTTCAA+GGG 0.619803 3.1:+40451107 MS.gene064364:CDS
ACCACCAACAGCCAAAGCAA+TGG 0.628337 3.1:+40452661 MS.gene064364:CDS
TGAAGCTGAGAGTGTTGCCA+TGG 0.636245 3.1:-40452795 None:intergenic
ATATGGACAGAAGATGGCAA+AGG 0.645418 3.1:+40451817 MS.gene064364:CDS
ACTCCCTTGTTCACACACCA+TGG 0.651056 3.1:+40452778 MS.gene064364:CDS
GCAGAAACGGAGTAAACTTG+AGG 0.652579 3.1:+40450626 MS.gene064364:CDS
CTTATTATCGTTGCACAATG+GGG 0.668170 3.1:+40451858 MS.gene064364:CDS
ATGGACAGAAGATGGCAAAG+GGG 0.709928 3.1:+40451819 MS.gene064364:CDS
TTGCCATGGTGTGTGAACAA+GGG 0.728086 3.1:-40452781 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAATAAATAGTGAA+GGG + chr3.1:40452093-40452112 MS.gene064364:intron 10.0%
!! AATAAAATAAAATTGCAAAA+TGG - chr3.1:40449678-40449697 None:intergenic 10.0%
!! TAAAAAAAAATAAATAGTGA+AGG + chr3.1:40452092-40452111 MS.gene064364:intron 10.0%
!! AGTATATAAATCTTTGTTAA+TGG - chr3.1:40452506-40452525 None:intergenic 15.0%
!! ATGTAATCAAATTTCATAAA+AGG - chr3.1:40451926-40451945 None:intergenic 15.0%
!! ATTAAAGTGACATTAATAAT+CGG + chr3.1:40452130-40452149 MS.gene064364:intron 15.0%
!! CAAATATATTCTTAATGTAA+AGG - chr3.1:40450472-40450491 None:intergenic 15.0%
!!! GTAGTTCAAATATTTTAAAT+TGG + chr3.1:40452001-40452020 MS.gene064364:intron 15.0%
!!! TAGTTTTTTATATTATTTCC+AGG - chr3.1:40450080-40450099 None:intergenic 15.0%
!! AAATCTGTACCTTAAAATTA+AGG + chr3.1:40452372-40452391 MS.gene064364:intron 20.0%
!! AATTCAAATCCAAACAATAA+TGG + chr3.1:40453070-40453089 MS.gene064364:CDS 20.0%
!! CAATGATTATAATTAAGTGT+AGG + chr3.1:40450021-40450040 MS.gene064364:intron 20.0%
!! TTCATTCAAATAATCGAAAA+CGG + chr3.1:40450345-40450364 MS.gene064364:intron 20.0%
!!! AGAGTTTAACCTTAATTTTA+AGG - chr3.1:40452384-40452403 None:intergenic 20.0%
!!! ATTTTTCCTGTAATTAAATC+CGG - chr3.1:40450694-40450713 None:intergenic 20.0%
!!! GAATTGAGTTTTACAAATAT+TGG + chr3.1:40449972-40449991 MS.gene064364:intron 20.0%
!!! TAAGATTTTGTACTTACAAA+TGG + chr3.1:40450806-40450825 MS.gene064364:intron 20.0%
!!! TACTTTTATGTTCAGTAATT+TGG + chr3.1:40451945-40451964 MS.gene064364:intron 20.0%
!!! TAGTATATAGACAAGTTTTA+CGG - chr3.1:40451669-40451688 None:intergenic 20.0%
!!! TATTTGAACTACACTAATTT+TGG - chr3.1:40451993-40452012 None:intergenic 20.0%
!!! TGTTTTGATTTTGTTAAGAA+TGG + chr3.1:40449869-40449888 MS.gene064364:intron 20.0%
!!! TTTTACTAAAAGAGCTAATT+TGG + chr3.1:40449698-40449717 MS.gene064364:intron 20.0%
!!! TTTTCCATTCCAAAAATATT+TGG - chr3.1:40452947-40452966 None:intergenic 20.0%
! AATCCAACAATATTAGAAAG+TGG + chr3.1:40452752-40452771 MS.gene064364:CDS 25.0%
! ACTTCACAAAAATGTAATGT+GGG + chr3.1:40450114-40450133 MS.gene064364:intron 25.0%
! AGTTACTCATCATTCTTTAA+AGG + chr3.1:40452298-40452317 MS.gene064364:intron 25.0%
! ATAAATTTCTGAGCCAAAAT+TGG - chr3.1:40452917-40452936 None:intergenic 25.0%
! ATTTGAATTACTTCCAATGA+TGG - chr3.1:40453059-40453078 None:intergenic 25.0%
! CAAAGTTAAACACAAAACTA+CGG + chr3.1:40450144-40450163 MS.gene064364:intron 25.0%
! CTAGTTTAATGACTAACATA+TGG + chr3.1:40450857-40450876 MS.gene064364:intron 25.0%
! GTTATATATCCATGGAAAAA+TGG + chr3.1:40452163-40452182 MS.gene064364:intron 25.0%
! TAATGACTAACATATGGATT+TGG + chr3.1:40450863-40450882 MS.gene064364:intron 25.0%
! TAATGGAAAACGACTAATTA+TGG + chr3.1:40449539-40449558 MS.gene064364:CDS 25.0%
! TACTTCACAAAAATGTAATG+TGG + chr3.1:40450113-40450132 MS.gene064364:intron 25.0%
! TAGCGAAGAAAAATGTTATT+TGG + chr3.1:40450400-40450419 MS.gene064364:intron 25.0%
! TATAAAAGTTGAAATAGCGA+CGG + chr3.1:40451374-40451393 MS.gene064364:intron 25.0%
! TATACAAGAGAAGATTGAAA+AGG + chr3.1:40451060-40451079 MS.gene064364:CDS 25.0%
! TCAACTTTATAATAGAGTGA+TGG - chr3.1:40450051-40450070 None:intergenic 25.0%
! TCTATTAAGTATAGGTTCAA+AGG + chr3.1:40452579-40452598 MS.gene064364:intron 25.0%
! TGTATGCTTCTATTAAGTAT+AGG + chr3.1:40452571-40452590 MS.gene064364:intron 25.0%
! TTGATCAAATTTCTCTACTT+AGG - chr3.1:40452470-40452489 None:intergenic 25.0%
!! AAAATGAGGTATGTTTTTCT+TGG + chr3.1:40449822-40449841 MS.gene064364:intron 25.0%
!! AAGCAAATAAAGCATTTCAA+GGG + chr3.1:40451107-40451126 MS.gene064364:CDS 25.0%
!! GAGTTTTACAAATATTGGAT+TGG + chr3.1:40449977-40449996 MS.gene064364:intron 25.0%
!! TAACATTTTTCTTCGCTATA+AGG - chr3.1:40450398-40450417 None:intergenic 25.0%
!!! ATATTTTTACAACCTTTGAG+AGG + chr3.1:40452344-40452363 MS.gene064364:intron 25.0%
!!! CGCTATTTCAACTTTTATAT+CGG - chr3.1:40451373-40451392 None:intergenic 25.0%
!!! TTAACAAGTTTTAGCATAGA+TGG + chr3.1:40451329-40451348 MS.gene064364:intron 25.0%
!!! TTAATGTTTTGGACAAGTTT+TGG + chr3.1:40451600-40451619 MS.gene064364:intron 25.0%
!!! TTACAAAGATTTGTTCCTTT+TGG + chr3.1:40452038-40452057 MS.gene064364:intron 25.0%
AAAACGACTAATTATGGATG+AGG + chr3.1:40449545-40449564 MS.gene064364:CDS 30.0%
AAAGAAGAATGATCATGTGA+TGG - chr3.1:40449951-40449970 None:intergenic 30.0%
AACAATAATGGTCCTACTAA+TGG + chr3.1:40453082-40453101 MS.gene064364:CDS 30.0%
AATATGTTTATATGTCCACG+AGG - chr3.1:40452424-40452443 None:intergenic 30.0%
AATGTATCACAGATTTCAGA+TGG + chr3.1:40451779-40451798 MS.gene064364:intron 30.0%
AGTTACCTAATATACGTTCA+TGG - chr3.1:40450273-40450292 None:intergenic 30.0%
AGTTTGATAAATGTTGTGAC+CGG - chr3.1:40451640-40451659 None:intergenic 30.0%
ATAGAGAATATTCTGATGCA+AGG + chr3.1:40449795-40449814 MS.gene064364:CDS 30.0%
ATGGTATGAATATGATTCCA+AGG + chr3.1:40450924-40450943 MS.gene064364:CDS 30.0%
GATCCACTTTCTAATATTGT+TGG - chr3.1:40452758-40452777 None:intergenic 30.0%
GTCATTTGCAATGATACTAT+AGG + chr3.1:40449456-40449475 MS.gene064364:CDS 30.0%
TGTGACTAATGTTCATTGAT+CGG - chr3.1:40452201-40452220 None:intergenic 30.0%
TTAGTAGGACCATTATTGTT+TGG - chr3.1:40453082-40453101 None:intergenic 30.0%
TTCACAAGAGAGAAAAAACA+TGG + chr3.1:40450982-40451001 MS.gene064364:CDS 30.0%
TTCAGTCGTTATGTCAAATT+TGG + chr3.1:40451474-40451493 MS.gene064364:intron 30.0%
TTTCCATGGATATATAACCT+AGG - chr3.1:40452161-40452180 None:intergenic 30.0%
! AAAGACTCGTTTTCATTTGT+TGG + chr3.1:40452269-40452288 MS.gene064364:intron 30.0%
! ATGTCAGCTCCAAATATTTT+TGG + chr3.1:40452935-40452954 MS.gene064364:CDS 30.0%
! CAAGCAAATAAAGCATTTCA+AGG + chr3.1:40451106-40451125 MS.gene064364:CDS 30.0%
! TATATAGACAAGTTTTACGG+CGG - chr3.1:40451666-40451685 None:intergenic 30.0%
! TCTCAAGTCATGTCTTTTAA+TGG + chr3.1:40449522-40449541 MS.gene064364:CDS 30.0%
! TTTGGACAATTTTCAAACAC+CGG + chr3.1:40451618-40451637 MS.gene064364:intron 30.0%
!! AAAAAACATGGTTGACTTGA+TGG + chr3.1:40450994-40451013 MS.gene064364:CDS 30.0%
!! AAAAAATCAACTAGTTCTGC+CGG + chr3.1:40450672-40450691 MS.gene064364:intron 30.0%
!! AATTACTCACCATTTTTCCA+TGG - chr3.1:40452175-40452194 None:intergenic 30.0%
!! CACTGGTTTGAAAATCTTAA+GGG - chr3.1:40451524-40451543 None:intergenic 30.0%
!! GTTTTGGTAACAACATATGA+AGG + chr3.1:40452620-40452639 MS.gene064364:CDS 30.0%
!!! AACAATTTTGTTGTTCGACA+AGG + chr3.1:40450425-40450444 MS.gene064364:intron 30.0%
!!! AGCTCCAAATATTTTTGGAA+TGG + chr3.1:40452940-40452959 MS.gene064364:CDS 30.0%
!!! ATGTTTTTTCTCTCTTGTGA+AGG - chr3.1:40450983-40451002 None:intergenic 30.0%
AAAACGAGTCTTTGTTAGTG+GGG - chr3.1:40452262-40452281 None:intergenic 35.0%
AAGGGAATTCACCAACTTAA+GGG - chr3.1:40451506-40451525 None:intergenic 35.0%
ACACCTAGGTTATATATCCA+TGG + chr3.1:40452155-40452174 MS.gene064364:intron 35.0%
ACTAGAGCAGAAGTGAATTT+CGG - chr3.1:40453022-40453041 None:intergenic 35.0%
AGATTTCAGATGGATGTCAA+TGG + chr3.1:40451789-40451808 MS.gene064364:intron 35.0%
AGCTTATTATCGTTGCACAA+TGG + chr3.1:40451856-40451875 MS.gene064364:CDS 35.0%
AGTCTATATGAGTGACCAAA+AGG - chr3.1:40452056-40452075 None:intergenic 35.0%
ATTAATAATCGGTGACACCT+AGG + chr3.1:40452141-40452160 MS.gene064364:intron 35.0%
CAACACCATGAACGTATATT+AGG + chr3.1:40450265-40450284 MS.gene064364:intron 35.0%
CACTACTTAAAAGAGAGACT+TGG - chr3.1:40451551-40451570 None:intergenic 35.0%
CAGATTTCAAATCCTCTCAA+AGG - chr3.1:40452359-40452378 None:intergenic 35.0%
CTGCATAATATGCTCTTCTA+GGG - chr3.1:40450601-40450620 None:intergenic 35.0%
CTTATTATCGTTGCACAATG+GGG + chr3.1:40451858-40451877 MS.gene064364:CDS 35.0%
CTTGAACATATAACGATGAG+TGG - chr3.1:40450833-40450852 None:intergenic 35.0%
GAAAACGAGTCTTTGTTAGT+GGG - chr3.1:40452263-40452282 None:intergenic 35.0%
GAAGAAGAAGAAGAAGAATG+TGG - chr3.1:40449504-40449523 None:intergenic 35.0%
GAAGCAACTGAAGAAAAGAA+TGG + chr3.1:40450905-40450924 MS.gene064364:CDS 35.0%
GAGAAAATATGGACAGAAGA+TGG + chr3.1:40451811-40451830 MS.gene064364:CDS 35.0%
GCTTATTATCGTTGCACAAT+GGG + chr3.1:40451857-40451876 MS.gene064364:CDS 35.0%
GGATGTCAATGGAGAAAATA+TGG + chr3.1:40451800-40451819 MS.gene064364:CDS 35.0%
GTGACTAATGTTCATTGATC+GGG - chr3.1:40452200-40452219 None:intergenic 35.0%
GTTTGAGAGAGCTAATTGAT+AGG + chr3.1:40450556-40450575 MS.gene064364:CDS 35.0%
TAAGGGAATTCACCAACTTA+AGG - chr3.1:40451507-40451526 None:intergenic 35.0%
TCGCTATAAGGCTTATTCTA+GGG - chr3.1:40450386-40450405 None:intergenic 35.0%
TCTAGTGTGATAGTTGGAAA+TGG - chr3.1:40452824-40452843 None:intergenic 35.0%
TGAAAACGAGTCTTTGTTAG+TGG - chr3.1:40452264-40452283 None:intergenic 35.0%
TTCGCTATAAGGCTTATTCT+AGG - chr3.1:40450387-40450406 None:intergenic 35.0%
TTGAAATAGCGACGGAAAAA+AGG + chr3.1:40451382-40451401 MS.gene064364:intron 35.0%
TTTGGTGAATTCCCTTAAGT+TGG + chr3.1:40451492-40451511 MS.gene064364:intron 35.0%
TTTGTTGCTAGGAGAAATCT+TGG - chr3.1:40449768-40449787 None:intergenic 35.0%
! ACTTAAAAGAGAGACTTGGT+TGG - chr3.1:40451547-40451566 None:intergenic 35.0%
! ACTTCCAATGATGGAAGTTA+TGG - chr3.1:40453050-40453069 None:intergenic 35.0%
! CAAATAAAGCATTTCAAGGG+TGG + chr3.1:40451110-40451129 MS.gene064364:CDS 35.0%
! TAACCTCCTTCAACCAATTT+TGG + chr3.1:40452901-40452920 MS.gene064364:CDS 35.0%
! TTTTAGCATAGATGGCTAGT+TGG + chr3.1:40451337-40451356 MS.gene064364:intron 35.0%
!! AGTCTCTCTTTTAAGTAGTG+TGG + chr3.1:40451551-40451570 MS.gene064364:intron 35.0%
!! ATGATCATGTGATGGATGAT+AGG - chr3.1:40449943-40449962 None:intergenic 35.0%
!! GCACTGGTTTGAAAATCTTA+AGG - chr3.1:40451525-40451544 None:intergenic 35.0%
!! GTTGATTTTCAGCATTCGTT+TGG - chr3.1:40450536-40450555 None:intergenic 35.0%
!! TTATAAAGTTGAGTTGAGCC+TGG + chr3.1:40450059-40450078 MS.gene064364:intron 35.0%
!!! TGCTGAAGATAGAAGTGTTT+TGG + chr3.1:40452604-40452623 MS.gene064364:CDS 35.0%
AAACCATCTGCACTTGTCAT+TGG - chr3.1:40452728-40452747 None:intergenic 40.0%
AAGAATTCACCCTTGGAACT+TGG - chr3.1:40451144-40451163 None:intergenic 40.0%
ATATGGACAGAAGATGGCAA+AGG + chr3.1:40451817-40451836 MS.gene064364:CDS 40.0%
CCAAGGGTGAATTCTTTCAA+GGG + chr3.1:40451148-40451167 MS.gene064364:CDS 40.0%
CGATAATAAGCTCTTGGACA+TGG - chr3.1:40451848-40451867 None:intergenic 40.0%
GATTTCTCCTAGCAACAAAC+TGG + chr3.1:40449769-40449788 MS.gene064364:CDS 40.0%
GCTGCATAATATGCTCTTCT+AGG - chr3.1:40450602-40450621 None:intergenic 40.0%
GCTTTCAAACCAAGTTCCAA+GGG + chr3.1:40451132-40451151 MS.gene064364:CDS 40.0%
GGCAAGATCAGAAGCTAATA+TGG + chr3.1:40451225-40451244 MS.gene064364:CDS 40.0%
GTATATACTTGCTTCCGAAC+TGG - chr3.1:40451893-40451912 None:intergenic 40.0%
GTGAGATCTAGTGTGATAGT+TGG - chr3.1:40452830-40452849 None:intergenic 40.0%
GTGCAACGATAATAAGCTCT+TGG - chr3.1:40451854-40451873 None:intergenic 40.0%
GTTCTGCCGGATTTAATTAC+AGG + chr3.1:40450685-40450704 MS.gene064364:intron 40.0%
TATGGACAGAAGATGGCAAA+GGG + chr3.1:40451818-40451837 MS.gene064364:CDS 40.0%
TCCAAGGGTGAATTCTTTCA+AGG + chr3.1:40451147-40451166 MS.gene064364:CDS 40.0%
TCTCCACTTGTACCATTAGT+AGG - chr3.1:40453097-40453116 None:intergenic 40.0%
TCTGAGCCAAAATTGGTTGA+AGG - chr3.1:40452910-40452929 None:intergenic 40.0%
TGATGCAAGGAACGAAAATG+AGG + chr3.1:40449808-40449827 MS.gene064364:CDS 40.0%
TGTAGGGTTAGGTCATTAAC+TGG - chr3.1:40449600-40449619 None:intergenic 40.0%
TGTTGTTGATGCCATTGCTT+TGG - chr3.1:40452675-40452694 None:intergenic 40.0%
TTATGCAGCTGAAGCAGAAA+CGG + chr3.1:40450613-40450632 MS.gene064364:CDS 40.0%
! GTTGAAAACCTGGACTTGTT+AGG - chr3.1:40450249-40450268 None:intergenic 40.0%
!! ATGATGCTCCATTTGGTGTA+GGG - chr3.1:40449616-40449635 None:intergenic 40.0%
!! CTATCATCCAGTTTGTTGCT+AGG - chr3.1:40449779-40449798 None:intergenic 40.0%
!! CTGGAAATGGGTTTTGCTAA+GGG + chr3.1:40450953-40450972 MS.gene064364:CDS 40.0%
!! GCAGCATCAATGTTACTTTC+AGG + chr3.1:40452701-40452720 MS.gene064364:CDS 40.0%
AGAAAGCTCGTGTCTCAGTT+AGG + chr3.1:40451203-40451222 MS.gene064364:CDS 45.0%
AGCAGCGTACTGTATACACA+AGG - chr3.1:40450496-40450515 None:intergenic 45.0%
ATGGACAGAAGATGGCAAAG+GGG + chr3.1:40451819-40451838 MS.gene064364:CDS 45.0%
CCCTTGAAAGAATTCACCCT+TGG - chr3.1:40451151-40451170 None:intergenic 45.0%
CCTTAGCAAAACCCATTTCC+AGG - chr3.1:40450955-40450974 None:intergenic 45.0%
GAAAGCTCGTGTCTCAGTTA+GGG + chr3.1:40451204-40451223 MS.gene064364:CDS 45.0%
GAGCCAAAATTGGTTGAAGG+AGG - chr3.1:40452907-40452926 None:intergenic 45.0%
GCAAAACCCATTTCCAGGAA+TGG - chr3.1:40450950-40450969 None:intergenic 45.0%
GCAGAAACGGAGTAAACTTG+AGG + chr3.1:40450626-40450645 MS.gene064364:CDS 45.0%
GCTGCCATAACTTCCATCAT+TGG + chr3.1:40453043-40453062 MS.gene064364:CDS 45.0%
GGCTTTCAAACCAAGTTCCA+AGG + chr3.1:40451131-40451150 MS.gene064364:CDS 45.0%
GGTCCTACTAATGGTACAAG+TGG + chr3.1:40453091-40453110 MS.gene064364:CDS 45.0%
TATGATTCCAAGGCCATTCC+TGG + chr3.1:40450934-40450953 MS.gene064364:CDS 45.0%
TGACCTAACCCTACACCAAA+TGG + chr3.1:40449605-40449624 MS.gene064364:CDS 45.0%
TTGCCATGGTGTGTGAACAA+GGG - chr3.1:40452784-40452803 None:intergenic 45.0%
! CGTTCATGGTGTTGAAAACC+TGG - chr3.1:40450259-40450278 None:intergenic 45.0%
! CTACGTGATGATGCTCCATT+TGG - chr3.1:40449623-40449642 None:intergenic 45.0%
! GGACGGCGTCATTAATGTTT+TGG + chr3.1:40451589-40451608 MS.gene064364:intron 45.0%
!! CCTGGAAATGGGTTTTGCTA+AGG + chr3.1:40450952-40450971 MS.gene064364:CDS 45.0%
!! GATGATGCTCCATTTGGTGT+AGG - chr3.1:40449617-40449636 None:intergenic 45.0%
!! AAAAAGTAATTTAATTATAT+TGG + chr3.1:40450763-40450782 MS.gene064364:intron 5.0%
ACCACCAACAGCCAAAGCAA+TGG + chr3.1:40452661-40452680 MS.gene064364:CDS 50.0%
ACCACTTAGCTTAGACCTCG+TGG + chr3.1:40452406-40452425 MS.gene064364:intron 50.0%
ACTCCCTTGTTCACACACCA+TGG + chr3.1:40452778-40452797 MS.gene064364:CDS 50.0%
CCAAGGCCATTCCTGGAAAT+GGG + chr3.1:40450941-40450960 MS.gene064364:CDS 50.0%
GATGCCATTGCTTTGGCTGT+TGG - chr3.1:40452668-40452687 None:intergenic 50.0%
GGACCAATGACAAGTGCAGA+TGG + chr3.1:40452722-40452741 MS.gene064364:CDS 50.0%
GTCTTTGTTAGTGGGGTCGA+TGG - chr3.1:40452255-40452274 None:intergenic 50.0%
GTGTGGACCTCTACTTCTAG+AGG + chr3.1:40451568-40451587 MS.gene064364:intron 50.0%
GTTGCCATGGTGTGTGAACA+AGG - chr3.1:40452785-40452804 None:intergenic 50.0%
TCCAAGGCCATTCCTGGAAA+TGG + chr3.1:40450940-40450959 MS.gene064364:CDS 50.0%
TCCACGAGGTCTAAGCTAAG+TGG - chr3.1:40452410-40452429 None:intergenic 50.0%
! AAGAGAGACTTGGTTGGCAC+TGG - chr3.1:40451541-40451560 None:intergenic 50.0%
! GGACCTCTACTTCTAGAGGA+CGG + chr3.1:40451572-40451591 MS.gene064364:intron 50.0%
!! ACCTGGACTTGTTAGGTGTC+AGG - chr3.1:40450242-40450261 None:intergenic 50.0%
!! GCTCCATTTGGTGTAGGGTT+AGG - chr3.1:40449611-40449630 None:intergenic 50.0%
!! TGAAGCTGAGAGTGTTGCCA+TGG - chr3.1:40452798-40452817 None:intergenic 50.0%
CCCATTTCCAGGAATGGCCT+TGG - chr3.1:40450944-40450963 None:intergenic 55.0%
GCCATTGCTTTGGCTGTTGG+TGG - chr3.1:40452665-40452684 None:intergenic 55.0%
GCCTGACACCTAACAAGTCC+AGG + chr3.1:40450238-40450257 MS.gene064364:intron 55.0%
GTGGGGTCGATGGTAGTTTG+TGG - chr3.1:40452245-40452264 None:intergenic 55.0%
TGGGGACTGCTTGTCCAGTT+CGG + chr3.1:40451876-40451895 MS.gene064364:CDS 55.0%
! ACGCCGTCCTCTAGAAGTAG+AGG - chr3.1:40451578-40451597 None:intergenic 55.0%
!! TGGCTGTTGGTGGTAGAGCA+TGG - chr3.1:40452655-40452674 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 40449447 40453138 40449447 ID=MS.gene064364
chr3.1 mRNA 40449447 40453138 40449447 ID=MS.gene064364.t1;Parent=MS.gene064364
chr3.1 exon 40449447 40449644 40449447 ID=MS.gene064364.t1.exon1;Parent=MS.gene064364.t1
chr3.1 CDS 40449447 40449644 40449447 ID=cds.MS.gene064364.t1;Parent=MS.gene064364.t1
chr3.1 exon 40449746 40449829 40449746 ID=MS.gene064364.t1.exon2;Parent=MS.gene064364.t1
chr3.1 CDS 40449746 40449829 40449746 ID=cds.MS.gene064364.t1;Parent=MS.gene064364.t1
chr3.1 exon 40450507 40450647 40450507 ID=MS.gene064364.t1.exon3;Parent=MS.gene064364.t1
chr3.1 CDS 40450507 40450647 40450507 ID=cds.MS.gene064364.t1;Parent=MS.gene064364.t1
chr3.1 exon 40450896 40451246 40450896 ID=MS.gene064364.t1.exon4;Parent=MS.gene064364.t1
chr3.1 CDS 40450896 40451246 40450896 ID=cds.MS.gene064364.t1;Parent=MS.gene064364.t1
chr3.1 exon 40451791 40451904 40451791 ID=MS.gene064364.t1.exon5;Parent=MS.gene064364.t1
chr3.1 CDS 40451791 40451904 40451791 ID=cds.MS.gene064364.t1;Parent=MS.gene064364.t1
chr3.1 exon 40452593 40453138 40452593 ID=MS.gene064364.t1.exon6;Parent=MS.gene064364.t1
chr3.1 CDS 40452593 40453138 40452593 ID=cds.MS.gene064364.t1;Parent=MS.gene064364.t1
Gene Sequence

>MS.gene064364

ATGGAAGAAGTCATTTGCAATGATACTATAGGAAATTCTAGTGTTGTTGAAGTTCCACATTCTTCTTCTTCTTCTTCTCAAGTCATGTCTTTTAATGGAAAACGACTAATTATGGATGAGGTTGATTTCTTTGCAGAGAAGAAAATGAGTCCAGTTAATGACCTAACCCTACACCAAATGGAGCATCATCACGTAGATGTAATTGAACTCATAATTTCATTAGATATTCCATTTTGCAATTTTATTTTATTTTTTACTAAAAGAGCTAATTTGGCTTATCATTGTTGATGATTTTTTAGACTAGTTTAGATCTTCTCACCAAGATTTCTCCTAGCAACAAACTGGATGATAGAGAATATTCTGATGCAAGGAACGAAAATGAGGTATGTTTTTCTTGGTGTTCATCTATAGACTATAGATATTGTTTTGATTTTGTTAAGAATGGTTTTTAATTTTCTTTCACATTATCACAACATATAGCTTTCTATATTTTCCTATCATCCATCACATGATCATTCTTCTTTCGAATTGAGTTTTACAAATATTGGATTGGATATGTGATATATGAGTTCAACAATGATTATAATTAAGTGTAGGAAATCCATCACTCTATTATAAAGTTGAGTTGAGCCTGGAAATAATATAAAAAACTAAGAAATTACACGATACTTCACAAAAATGTAATGTGGGAAAACTTCAAAGTTAAACACAAAACTACGGTTTTTGTCTAATGAAGACTAAATAATTAGAACACTCTAATTTTTTTCACAATACATGAAATTTTCTCAAACGCCTGACACCTAACAAGTCCAGGTTTTCAACACCATGAACGTATATTAGGTAACTTAATTATACAATGATTATTAATGATTTTATGCATAAAAAAATACTAAAAGAATTCATTCAAATAATCGAAAACGGTTTCATTTCTTCTTGCCCTAGAATAAGCCTTATAGCGAAGAAAAATGTTATTTGGACAACAATTTTGTTGTTCGACAAGGTGTGTTTGTATGTATATTTTTCCTTTACATTAAGAATATATTTGTCCTTGTGTATACAGTACGCTGCTGTGTTAGCTAAATTGCACCAAACGAATGCTGAAAATCAACGTTTGAGAGAGCTAATTGATAGGCTTAGAATTGATCACAATGCCCTAGAAGAGCATATTATGCAGCTGAAGCAGAAACGGAGTAAACTTGAGGTAGTTCGATTCTTTCTTTTATAAAAAAAATCAACTAGTTCTGCCGGATTTAATTACAGGAAAAATAATTAATTATAATCATATTGAAAATAATTTAATTATATAATACAATTAAAAAAAGTAATTTAATTATATTGGATTTAAAGTATAATTTATTATAAGATTTTGTACTTACAAATGGACCACTCATCGTTATATGTTCAAGCTAGCTAGTTTAATGACTAACATATGGATTTGGTTTTGTATAGATTAATGATGAAGCAACTGAAGAAAAGAATGGTATGAATATGATTCCAAGGCCATTCCTGGAAATGGGTTTTGCTAAGGGTGAGCCTTCACAAGAGAGAAAAAACATGGTTGACTTGATGGAGTGCGATAAAAAGAGTACTCAAAAGTTTTGCAATAATGAAATTATACAAGAGAAGATTGAAAAGGAAGAAGATCATCATGAGAATTCACAAGCAAATAAAGCATTTCAAGGGTGGCTTTCAAACCAAGTTCCAAGGGTGAATTCTTTCAAGGGTGTTGATGATCAAGCATCAGAATCAATGATTAAGAAAGCTCGTGTCTCAGTTAGGGCAAGATCAGAAGCTAATATGGTTAGTGTCAAATTAATTAGCTAATGATGCTTGTTTATATCTTTCAAAACTTTTCAATTAATGATATCTCACATCTAATTAATTAACAAGTTTTAGCATAGATGGCTAGTTGGTGAATTCTAACCGATATAAAAGTTGAAATAGCGACGGAAAAAAGGAAAATATGTCTCTAACTTCGTCGCTAAGTGTTTAATTCAGTGAGCAATTTTATTTTTTATGTCTCAAATTTCAGTCGTTATGTCAAATTTGGTGAATTCCCTTAAGTTGGTGAATTCCCTTAAGATTTTCAAACCAGTGCCAACCAAGTCTCTCTTTTAAGTAGTGTGGACCTCTACTTCTAGAGGACGGCGTCATTAATGTTTTGGACAAGTTTTGGACAATTTTCAAACACCGGTCACAACATTTATCAAACTAGTCCGCCGTAAAACTTGTCTATATACTAGTGTATATTGTGTGTATTGTTGAAGTACAACAATATTGTGTGCTATATGAATTATAATTACTGCTAGACTAATTTTCTTTTTGATCAATTAATGTATCACAGATTTCAGATGGATGTCAATGGAGAAAATATGGACAGAAGATGGCAAAGGGGAATCCATGTCCAAGAGCTTATTATCGTTGCACAATGGGGACTGCTTGTCCAGTTCGGAAGCAAGTATATACAATCTCTCTACCTTTTATGAAATTTGATTACATACTTTTATGTTCAGTAATTTGGACATATATATAAAAGAGTCAGTCCAAAATTAGTGTAGTTCAAATATTTTAAATTGGTTCTAATATAAAAGTTACAAAGATTTGTTCCTTTTGGTCACTCATATAGACTTGTTAAGATTTTTTTATAAAAAAAAATAAATAGTGAAGGGAAAAATTAGTTTTAATTAAAGTGACATTAATAATCGGTGACACCTAGGTTATATATCCATGGAAAAATGGTGAGTAATTTACCCGATCAATGAACATTAGTCACATAATGACATTTCAAGTGACATCCACAAACTACCATCGACCCCACTAACAAAGACTCGTTTTCATTTGTTGGTGTGTAAGTTACTCATCATTCTTTAAAGGCAATCTATAAAAAAATCTTAATAATATTTTTACAACCTTTGAGAGGATTTGAAATCTGTACCTTAAAATTAAGGTTAAACTCTTAACCACTTAGCTTAGACCTCGTGGACATATAAACATATTAAAATCAAATTTAACGTTCATTACCTAAGTAGAGAAATTTGATCAACTTGACTTAAAGACCATTAACAAAGATTTATATACTCTTAACATGAATTTGCACAAATTAACTTATACATTTTAATTATTATGTATGCTTCTATTAAGTATAGGTTCAAAGGTGTGCTGAAGATAGAAGTGTTTTGGTAACAACATATGAAGGACAACATAACCATGCTCTACCACCAACAGCCAAAGCAATGGCATCAACAACAACATCAGCAGCATCAATGTTACTTTCAGGACCAATGACAAGTGCAGATGGTTTAATAAATCCAACAATATTAGAAAGTGGATCACTCCCTTGTTCACACACCATGGCAACACTCTCAGCTTCAGCTCCATTTCCAACTATCACACTAGATCTCACTGAAGAAGCTATCAATAATTCATCACAAAAACAACTACAACAAAGTCAATTTAACCTCCTTCAACCAATTTTGGCTCAGAAATTTATGTCAGCTCCAAATATTTTTGGAATGGAAAATGCTTCATTTGCTGATACAGTTAGTGCTGCAACAGCTGCTATGACTTCTGATCCGAAATTCACTTCTGCTCTAGTTGCTGCCATAACTTCCATCATTGGAAGTAATTCAAATCCAAACAATAATGGTCCTACTAATGGTACAAGTGGAGACCAGAATTGCAATAAAGCATAG
Protein sequence

>MS.gene064364.t1

MEEVICNDTIGNSSVVEVPHSSSSSSQVMSFNGKRLIMDEVDFFAEKKMSPVNDLTLHQMEHHHVDTSLDLLTKISPSNKLDDREYSDARNENEYAAVLAKLHQTNAENQRLRELIDRLRIDHNALEEHIMQLKQKRSKLEINDEATEEKNGMNMIPRPFLEMGFAKGEPSQERKNMVDLMECDKKSTQKFCNNEIIQEKIEKEEDHHENSQANKAFQGWLSNQVPRVNSFKGVDDQASESMIKKARVSVRARSEANMISDGCQWRKYGQKMAKGNPCPRAYYRCTMGTACPVRKQVQRCAEDRSVLVTTYEGQHNHALPPTAKAMASTTTSAASMLLSGPMTSADGLINPTILESGSLPCSHTMATLSASAPFPTITLDLTEEAINNSSQKQLQQSQFNLLQPILAQKFMSAPNIFGMENASFADTVSAATAAMTSDPKFTSALVAAITSIIGSNSNPNNNGPTNGTSGDQNCNKA