Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064444.t1 | KEH19918.1 | 96 | 275 | 11 | 0 | 1 | 275 | 2 | 276 | 1.20E-148 | 535.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064444.t1 | Q500U8 | 50.2 | 271 | 127 | 3 | 8 | 273 | 8 | 275 | 2.1e-69 | 263.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064444.t1 | A0A072U2D5 | 96.0 | 275 | 11 | 0 | 1 | 275 | 2 | 276 | 8.5e-149 | 535.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051838 | MS.gene064444 | 0.82081 | 5.64E-53 | -1.69E-46 |
| MS.gene05494 | MS.gene064444 | 0.804962 | 1.68E-49 | -1.69E-46 |
| MS.gene05666 | MS.gene064444 | 0.806462 | 8.13E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064444.t1 | MTR_8g062110 | 96.000 | 275 | 11 | 0 | 1 | 275 | 11 | 285 | 0.0 | 546 |
| MS.gene064444.t1 | MTR_8g062110 | 96.000 | 275 | 11 | 0 | 1 | 275 | 2 | 276 | 0.0 | 546 |
| MS.gene064444.t1 | MTR_8g062110 | 96.000 | 275 | 11 | 0 | 1 | 275 | 2 | 276 | 0.0 | 546 |
| MS.gene064444.t1 | MTR_8g062110 | 96.000 | 275 | 11 | 0 | 1 | 275 | 2 | 276 | 0.0 | 545 |
| MS.gene064444.t1 | MTR_8g062440 | 89.091 | 275 | 30 | 0 | 1 | 275 | 1 | 275 | 0.0 | 507 |
| MS.gene064444.t1 | MTR_8g062440 | 89.091 | 275 | 30 | 0 | 1 | 275 | 1 | 275 | 0.0 | 506 |
| MS.gene064444.t1 | MTR_8g062440 | 88.406 | 276 | 31 | 1 | 1 | 275 | 1 | 276 | 0.0 | 501 |
| MS.gene064444.t1 | MTR_4g077100 | 73.091 | 275 | 73 | 1 | 2 | 275 | 5 | 279 | 2.79e-151 | 424 |
| MS.gene064444.t1 | MTR_3g005170 | 72.727 | 275 | 74 | 1 | 2 | 275 | 4 | 278 | 5.15e-151 | 423 |
| MS.gene064444.t1 | MTR_4g077100 | 73.091 | 275 | 73 | 1 | 2 | 275 | 5 | 279 | 8.76e-151 | 424 |
| MS.gene064444.t1 | MTR_3g005170 | 72.727 | 275 | 74 | 1 | 2 | 275 | 4 | 278 | 1.16e-150 | 424 |
| MS.gene064444.t1 | MTR_4g077130 | 72.727 | 275 | 74 | 1 | 2 | 275 | 3 | 277 | 5.14e-150 | 422 |
| MS.gene064444.t1 | MTR_3g005210 | 69.630 | 270 | 81 | 1 | 7 | 275 | 5 | 274 | 5.33e-142 | 402 |
| MS.gene064444.t1 | MTR_8g062110 | 97.778 | 180 | 4 | 0 | 96 | 275 | 11 | 190 | 1.04e-129 | 365 |
| MS.gene064444.t1 | MTR_8g062110 | 97.778 | 180 | 4 | 0 | 96 | 275 | 11 | 190 | 1.65e-129 | 367 |
| MS.gene064444.t1 | MTR_3g005170 | 65.091 | 275 | 64 | 2 | 2 | 275 | 4 | 247 | 7.80e-128 | 365 |
| MS.gene064444.t1 | MTR_5g056600 | 47.191 | 267 | 132 | 5 | 9 | 270 | 5 | 267 | 6.60e-79 | 241 |
| MS.gene064444.t1 | MTR_2g101330 | 46.296 | 270 | 140 | 3 | 8 | 273 | 5 | 273 | 1.39e-77 | 238 |
| MS.gene064444.t1 | MTR_4g006940 | 49.077 | 271 | 129 | 5 | 1 | 269 | 10 | 273 | 7.93e-77 | 235 |
| MS.gene064444.t1 | MTR_4g006940 | 49.077 | 271 | 129 | 5 | 1 | 269 | 10 | 273 | 7.93e-77 | 235 |
| MS.gene064444.t1 | MTR_5g072620 | 46.324 | 272 | 139 | 5 | 6 | 273 | 3 | 271 | 1.13e-76 | 236 |
| MS.gene064444.t1 | MTR_4g006940 | 49.077 | 271 | 129 | 5 | 1 | 269 | 10 | 273 | 7.89e-76 | 234 |
| MS.gene064444.t1 | MTR_1g022440 | 44.128 | 281 | 144 | 7 | 1 | 273 | 1 | 276 | 4.63e-75 | 232 |
| MS.gene064444.t1 | MTR_2g104960 | 48.339 | 271 | 131 | 5 | 5 | 273 | 17 | 280 | 7.52e-73 | 227 |
| MS.gene064444.t1 | MTR_1g022445 | 42.456 | 285 | 143 | 6 | 1 | 273 | 1 | 276 | 6.37e-72 | 224 |
| MS.gene064444.t1 | MTR_3g031650 | 41.544 | 272 | 154 | 4 | 6 | 274 | 3 | 272 | 9.46e-72 | 222 |
| MS.gene064444.t1 | MTR_3g031650 | 41.544 | 272 | 154 | 4 | 6 | 274 | 3 | 272 | 3.53e-71 | 222 |
| MS.gene064444.t1 | MTR_4g009040 | 43.542 | 271 | 145 | 6 | 6 | 272 | 11 | 277 | 5.79e-67 | 211 |
| MS.gene064444.t1 | MTR_4g009040 | 43.116 | 276 | 145 | 7 | 5 | 272 | 10 | 281 | 3.04e-65 | 207 |
| MS.gene064444.t1 | MTR_4g009690 | 42.751 | 269 | 149 | 4 | 6 | 272 | 11 | 276 | 2.44e-64 | 204 |
| MS.gene064444.t1 | MTR_4g092080 | 40.636 | 283 | 153 | 5 | 4 | 273 | 10 | 290 | 2.89e-64 | 204 |
| MS.gene064444.t1 | MTR_4g081440 | 42.268 | 291 | 133 | 6 | 9 | 272 | 25 | 307 | 1.58e-62 | 201 |
| MS.gene064444.t1 | MTR_4g081440 | 42.268 | 291 | 133 | 6 | 9 | 272 | 21 | 303 | 1.68e-62 | 201 |
| MS.gene064444.t1 | MTR_4g009690 | 42.593 | 270 | 149 | 5 | 6 | 272 | 11 | 277 | 1.71e-62 | 200 |
| MS.gene064444.t1 | MTR_7g074880 | 40.072 | 277 | 156 | 6 | 3 | 273 | 4 | 276 | 6.03e-62 | 198 |
| MS.gene064444.t1 | MTR_2g028620 | 41.935 | 279 | 145 | 10 | 1 | 268 | 1 | 273 | 1.29e-59 | 192 |
| MS.gene064444.t1 | MTR_2g028620 | 41.935 | 279 | 145 | 10 | 1 | 268 | 1 | 273 | 1.36e-59 | 192 |
| MS.gene064444.t1 | MTR_7g074730 | 39.068 | 279 | 158 | 5 | 3 | 273 | 4 | 278 | 1.89e-58 | 189 |
| MS.gene064444.t1 | MTR_7g074820 | 39.643 | 280 | 156 | 5 | 3 | 273 | 4 | 279 | 4.03e-58 | 189 |
| MS.gene064444.t1 | MTR_7g074710 | 40.072 | 277 | 156 | 5 | 3 | 273 | 4 | 276 | 5.77e-58 | 188 |
| MS.gene064444.t1 | MTR_7g074850 | 38.929 | 280 | 158 | 5 | 3 | 273 | 4 | 279 | 1.45e-57 | 187 |
| MS.gene064444.t1 | MTR_0685s0030 | 65.517 | 116 | 39 | 1 | 161 | 275 | 1 | 116 | 1.49e-47 | 156 |
| MS.gene064444.t1 | MTR_0685s0030 | 65.517 | 116 | 39 | 1 | 161 | 275 | 1 | 116 | 1.68e-47 | 154 |
| MS.gene064444.t1 | MTR_3g011130 | 62.931 | 116 | 42 | 1 | 99 | 213 | 30 | 145 | 1.18e-44 | 148 |
| MS.gene064444.t1 | MTR_4g023730 | 32.862 | 283 | 177 | 5 | 1 | 274 | 1 | 279 | 2.92e-44 | 152 |
| MS.gene064444.t1 | MTR_4g077150 | 47.458 | 177 | 42 | 3 | 98 | 274 | 21 | 146 | 3.61e-43 | 145 |
| MS.gene064444.t1 | MTR_0164s0070 | 54.762 | 126 | 56 | 1 | 8 | 132 | 5 | 130 | 9.60e-43 | 145 |
| MS.gene064444.t1 | MTR_7g074870 | 35.897 | 234 | 142 | 3 | 45 | 273 | 8 | 238 | 2.14e-41 | 144 |
| MS.gene064444.t1 | MTR_5g029990 | 29.151 | 271 | 168 | 7 | 7 | 270 | 11 | 264 | 3.81e-32 | 120 |
| MS.gene064444.t1 | MTR_6g406250 | 28.309 | 272 | 177 | 7 | 7 | 267 | 54 | 318 | 2.64e-29 | 114 |
| MS.gene064444.t1 | MTR_2g013230 | 30.241 | 291 | 177 | 7 | 8 | 275 | 8 | 295 | 5.50e-29 | 113 |
| MS.gene064444.t1 | MTR_6g406250 | 30.808 | 198 | 123 | 4 | 7 | 196 | 54 | 245 | 2.19e-28 | 109 |
| MS.gene064444.t1 | MTR_7g117190 | 32.215 | 298 | 161 | 13 | 8 | 274 | 7 | 294 | 3.99e-28 | 110 |
| MS.gene064444.t1 | MTR_7g117190 | 31.633 | 294 | 168 | 11 | 8 | 274 | 7 | 294 | 1.00e-27 | 109 |
| MS.gene064444.t1 | MTR_2g013250 | 30.822 | 292 | 174 | 8 | 8 | 275 | 7 | 294 | 1.35e-27 | 109 |
| MS.gene064444.t1 | MTR_2g013260 | 28.125 | 288 | 187 | 5 | 8 | 275 | 8 | 295 | 8.74e-26 | 103 |
| MS.gene064444.t1 | MTR_2g013260 | 28.125 | 288 | 187 | 5 | 8 | 275 | 8 | 295 | 2.58e-25 | 103 |
| MS.gene064444.t1 | MTR_1g099230 | 68.852 | 61 | 19 | 0 | 99 | 159 | 36 | 96 | 3.40e-24 | 96.3 |
| MS.gene064444.t1 | MTR_8g062490 | 80.435 | 46 | 9 | 0 | 226 | 271 | 66 | 111 | 2.96e-18 | 79.3 |
| MS.gene064444.t1 | MTR_8g062710 | 46.809 | 94 | 38 | 3 | 8 | 100 | 20 | 102 | 1.34e-16 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064444.t1 | AT5G19440 | 68.364 | 275 | 86 | 1 | 2 | 275 | 4 | 278 | 1.26e-140 | 399 |
| MS.gene064444.t1 | AT1G51410 | 66.182 | 275 | 92 | 1 | 2 | 275 | 3 | 277 | 4.63e-136 | 387 |
| MS.gene064444.t1 | AT1G09480 | 61.957 | 276 | 104 | 1 | 1 | 275 | 1 | 276 | 3.59e-120 | 347 |
| MS.gene064444.t1 | AT1G09480 | 61.957 | 276 | 104 | 1 | 1 | 275 | 48 | 323 | 7.08e-120 | 348 |
| MS.gene064444.t1 | AT1G09490 | 61.957 | 276 | 104 | 1 | 1 | 275 | 1 | 276 | 9.12e-119 | 343 |
| MS.gene064444.t1 | AT1G09510 | 59.783 | 276 | 110 | 1 | 1 | 275 | 1 | 276 | 6.33e-116 | 336 |
| MS.gene064444.t1 | AT1G66800 | 59.926 | 272 | 104 | 2 | 1 | 271 | 1 | 268 | 1.72e-109 | 319 |
| MS.gene064444.t1 | AT1G09500 | 56.318 | 277 | 119 | 2 | 1 | 275 | 1 | 277 | 3.73e-108 | 315 |
| MS.gene064444.t1 | AT1G09500 | 56.318 | 277 | 119 | 2 | 1 | 275 | 1 | 277 | 8.67e-108 | 315 |
| MS.gene064444.t1 | AT1G09490 | 60.086 | 233 | 92 | 1 | 44 | 275 | 13 | 245 | 8.59e-95 | 281 |
| MS.gene064444.t1 | AT4G35420 | 49.814 | 269 | 131 | 2 | 8 | 273 | 8 | 275 | 4.12e-87 | 263 |
| MS.gene064444.t1 | AT1G09500 | 53.138 | 239 | 110 | 2 | 39 | 275 | 5 | 243 | 1.03e-84 | 255 |
| MS.gene064444.t1 | AT5G58490 | 45.290 | 276 | 146 | 4 | 1 | 273 | 2 | 275 | 1.45e-75 | 233 |
| MS.gene064444.t1 | AT1G68540 | 46.067 | 267 | 133 | 6 | 10 | 269 | 6 | 268 | 4.19e-75 | 232 |
| MS.gene064444.t1 | AT1G15950 | 48.148 | 270 | 131 | 6 | 2 | 269 | 7 | 269 | 2.09e-74 | 229 |
| MS.gene064444.t1 | AT1G15950 | 48.148 | 270 | 131 | 6 | 2 | 269 | 7 | 269 | 2.71e-74 | 228 |
| MS.gene064444.t1 | AT1G15950 | 48.148 | 270 | 131 | 6 | 2 | 269 | 7 | 269 | 5.50e-74 | 228 |
| MS.gene064444.t1 | AT1G15950 | 48.315 | 267 | 129 | 6 | 5 | 269 | 10 | 269 | 8.88e-74 | 229 |
| MS.gene064444.t1 | AT1G15950 | 48.315 | 267 | 129 | 6 | 5 | 269 | 10 | 269 | 8.88e-74 | 229 |
| MS.gene064444.t1 | AT1G15950 | 48.148 | 270 | 131 | 6 | 2 | 269 | 7 | 269 | 1.54e-73 | 228 |
| MS.gene064444.t1 | AT1G80820 | 47.761 | 268 | 131 | 6 | 4 | 269 | 4 | 264 | 2.32e-71 | 221 |
| MS.gene064444.t1 | AT1G80820 | 47.761 | 268 | 131 | 6 | 4 | 269 | 4 | 264 | 1.71e-70 | 220 |
| MS.gene064444.t1 | AT2G02400 | 42.491 | 273 | 146 | 7 | 6 | 273 | 4 | 270 | 4.11e-70 | 219 |
| MS.gene064444.t1 | AT5G42800 | 42.705 | 281 | 148 | 6 | 1 | 273 | 1 | 276 | 6.06e-69 | 218 |
| MS.gene064444.t1 | AT1G25460 | 42.642 | 265 | 143 | 5 | 10 | 269 | 6 | 266 | 4.52e-63 | 201 |
| MS.gene064444.t1 | AT2G33590 | 41.573 | 267 | 147 | 6 | 8 | 269 | 9 | 271 | 2.35e-59 | 191 |
| MS.gene064444.t1 | AT2G33600 | 44.151 | 265 | 141 | 5 | 8 | 268 | 9 | 270 | 3.39e-59 | 191 |
| MS.gene064444.t1 | AT4G27250 | 41.036 | 251 | 134 | 4 | 9 | 248 | 14 | 261 | 1.39e-56 | 185 |
| MS.gene064444.t1 | AT1G61720 | 38.078 | 281 | 159 | 4 | 6 | 273 | 11 | 289 | 9.41e-56 | 183 |
| MS.gene064444.t1 | AT4G27250 | 40.996 | 261 | 130 | 6 | 9 | 248 | 14 | 271 | 1.08e-55 | 183 |
| MS.gene064444.t1 | AT1G76470 | 41.791 | 268 | 147 | 5 | 8 | 269 | 7 | 271 | 1.61e-53 | 177 |
| MS.gene064444.t1 | AT2G45400 | 36.786 | 280 | 167 | 3 | 4 | 273 | 36 | 315 | 1.51e-48 | 164 |
| MS.gene064444.t1 | AT2G45400 | 36.786 | 280 | 167 | 3 | 4 | 273 | 36 | 315 | 2.97e-48 | 164 |
| MS.gene064444.t1 | AT2G45400 | 40.183 | 219 | 124 | 2 | 4 | 215 | 36 | 254 | 6.87e-43 | 147 |
| MS.gene064444.t1 | AT2G23910 | 30.651 | 261 | 166 | 7 | 9 | 264 | 11 | 261 | 4.73e-40 | 140 |
| MS.gene064444.t1 | AT2G23910 | 30.651 | 261 | 166 | 7 | 9 | 264 | 11 | 261 | 5.16e-40 | 140 |
| MS.gene064444.t1 | AT2G23910 | 30.651 | 261 | 166 | 7 | 9 | 264 | 11 | 261 | 6.97e-40 | 140 |
| MS.gene064444.t1 | AT4G30470 | 30.418 | 263 | 163 | 6 | 9 | 264 | 11 | 260 | 4.04e-39 | 139 |
| MS.gene064444.t1 | AT1G68540 | 39.024 | 164 | 92 | 4 | 111 | 269 | 1 | 161 | 4.32e-34 | 123 |
| MS.gene064444.t1 | AT1G15950 | 42.197 | 173 | 96 | 3 | 99 | 269 | 1 | 171 | 1.08e-33 | 123 |
| MS.gene064444.t1 | AT2G45400 | 31.950 | 241 | 156 | 2 | 41 | 273 | 18 | 258 | 3.13e-30 | 115 |
| MS.gene064444.t1 | AT2G23910 | 29.464 | 224 | 143 | 7 | 46 | 264 | 14 | 227 | 1.15e-29 | 113 |
| MS.gene064444.t1 | AT5G14700 | 29.804 | 255 | 163 | 7 | 6 | 248 | 53 | 303 | 4.85e-28 | 110 |
| MS.gene064444.t1 | AT5G14700 | 31.841 | 201 | 123 | 5 | 6 | 196 | 53 | 249 | 2.90e-26 | 104 |
| MS.gene064444.t1 | AT4G33360 | 27.273 | 253 | 158 | 7 | 4 | 250 | 11 | 243 | 7.30e-17 | 79.3 |
| MS.gene064444.t1 | AT4G33360 | 27.309 | 249 | 155 | 7 | 8 | 250 | 3 | 231 | 8.15e-17 | 79.3 |
| MS.gene064444.t1 | AT4G33360 | 27.273 | 253 | 158 | 7 | 4 | 250 | 11 | 243 | 9.88e-17 | 79.3 |
Find 60 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCATCCATATGCTTTATT+TGG | 0.080401 | 8.1:-42012200 | None:intergenic |
| GGAGAGGTTGCAACTCTTTA+AGG | 0.141949 | 8.1:+42009146 | MS.gene064444:CDS |
| CCATTTATTAGGTTTAAAAT+TGG | 0.243613 | 8.1:-42010973 | None:intergenic |
| CAGTCTCATACGCCAGAATA+TGG | 0.258064 | 8.1:-42012247 | None:intergenic |
| AGCAAGTGGTCAACCTTATT+AGG | 0.265908 | 8.1:-42009105 | None:intergenic |
| TGTTGCTAACGCCCATATTC+TGG | 0.300399 | 8.1:+42012235 | MS.gene064444:CDS |
| TTTGATTCCCTACATAAATC+TGG | 0.326261 | 8.1:-42010488 | None:intergenic |
| TTGTCTGAAATTTGTAAAGT+TGG | 0.353800 | 8.1:-42012350 | None:intergenic |
| GACCACTTGCTTAAACTTGA+TGG | 0.374425 | 8.1:+42009117 | MS.gene064444:CDS |
| GTCTCATCAACTATGATTCC+AGG | 0.385079 | 8.1:-42010452 | None:intergenic |
| AGCTAGTGGAAGATATTGTT+TGG | 0.390621 | 8.1:+42012274 | MS.gene064444:CDS |
| CTCTTACAACCAGAGCTTAA+CGG | 0.407447 | 8.1:+42010940 | MS.gene064444:CDS |
| AACGAACAGGTGAAGCAGTA+TGG | 0.409489 | 8.1:-42009227 | None:intergenic |
| CCATATGCTTTATTTGGAAA+AGG | 0.409931 | 8.1:-42012194 | None:intergenic |
| ACTCTTTAAGGCGGATCTCT+TGG | 0.410511 | 8.1:+42009158 | MS.gene064444:CDS |
| TGTCTGAAATTTGTAAAGTT+GGG | 0.417946 | 8.1:-42012349 | None:intergenic |
| AGAGGTCCTGCCACCATTGT+TGG | 0.428227 | 8.1:-42010919 | None:intergenic |
| GCAAGCAGGTAATCCTAATA+AGG | 0.431032 | 8.1:+42009092 | MS.gene064444:intron |
| TTTCAGATCCAGATTTATGT+AGG | 0.435231 | 8.1:+42010480 | MS.gene064444:CDS |
| TCCTTTGACTATGTTGTTGA+GGG | 0.439038 | 8.1:+42009189 | MS.gene064444:CDS |
| TTCCTTTGACTATGTTGTTG+AGG | 0.451838 | 8.1:+42009188 | MS.gene064444:CDS |
| GTACACACTTTCGAAGACTT+TGG | 0.455183 | 8.1:+42010837 | MS.gene064444:CDS |
| CTTTGGCTGAGGCTGCTGCC+TGG | 0.462996 | 8.1:+42010854 | MS.gene064444:CDS |
| GAGGTCCTGCCACCATTGTT+GGG | 0.466002 | 8.1:-42010918 | None:intergenic |
| TCAGGCTGAGTTGATTGATC+CGG | 0.473743 | 8.1:+42010316 | MS.gene064444:intron |
| CTGCAGTTGTATATGATACA+AGG | 0.475514 | 8.1:+42010420 | MS.gene064444:CDS |
| CACCATCAAGTTTAAGCAAG+TGG | 0.475735 | 8.1:-42009119 | None:intergenic |
| GTGTGTGTGACAGGTGCTGC+TGG | 0.477693 | 8.1:+42008901 | MS.gene064444:CDS |
| TCAACACTTCCGTTAAGCTC+TGG | 0.486325 | 8.1:-42010949 | None:intergenic |
| GGAAAAGTGGTGTGTGTGAC+AGG | 0.486873 | 8.1:+42008892 | MS.gene064444:CDS |
| AAGGCGGATCTCTTGGAAGA+AGG | 0.495574 | 8.1:+42009165 | MS.gene064444:CDS |
| TATGAGTGGGGAAGGAAAAG+TGG | 0.501831 | 8.1:+42008879 | None:intergenic |
| GTTGATTGATCCGGCACTGA+AGG | 0.508391 | 8.1:+42010325 | MS.gene064444:CDS |
| AGTCTCATACGCCAGAATAT+GGG | 0.517552 | 8.1:-42012246 | None:intergenic |
| TCATTTACGACAAAACGAAC+AGG | 0.531722 | 8.1:-42009240 | None:intergenic |
| TATGAGACTGCTTCAGCTAG+TGG | 0.532203 | 8.1:+42012260 | MS.gene064444:CDS |
| TTAAGAGTTCCCTTCAGTGC+CGG | 0.539925 | 8.1:-42010335 | None:intergenic |
| TTCAGATCCAGATTTATGTA+GGG | 0.546056 | 8.1:+42010481 | MS.gene064444:CDS |
| AGATTTATGTAGGGAATCAA+AGG | 0.549744 | 8.1:+42010490 | MS.gene064444:CDS |
| AAAAGGATTATGAGTGGGGA+AGG | 0.549887 | 8.1:+42008871 | None:intergenic |
| TTCCAAATAAAGCATATGGA+TGG | 0.552811 | 8.1:+42012198 | MS.gene064444:CDS |
| AAGATAACTCGTTTCACAGA+TGG | 0.555240 | 8.1:-42010383 | None:intergenic |
| ACTTTCGAAGACTTTGGCTG+AGG | 0.557625 | 8.1:+42010843 | MS.gene064444:CDS |
| TGACAGTGTAACCACGTTGG+AGG | 0.560969 | 8.1:-42008954 | None:intergenic |
| GCTTAAACTTGATGGTGCAA+AGG | 0.582641 | 8.1:+42009125 | MS.gene064444:CDS |
| ATTAACCCAACAATGGTGGC+AGG | 0.586153 | 8.1:+42010913 | MS.gene064444:CDS |
| ACCCTCAACAACATAGTCAA+AGG | 0.587229 | 8.1:-42009190 | None:intergenic |
| TTAAGCTCTGGTTGTAAGAG+AGG | 0.589725 | 8.1:-42010937 | None:intergenic |
| ATATTGTTTGGCTGAGAGAG+TGG | 0.592698 | 8.1:+42012286 | MS.gene064444:CDS |
| TTGATTGATCCGGCACTGAA+GGG | 0.592808 | 8.1:+42010326 | MS.gene064444:CDS |
| AACTTGATGGTGCAAAGGAG+AGG | 0.594203 | 8.1:+42009130 | MS.gene064444:CDS |
| TGCTATTAACCCAACAATGG+TGG | 0.600626 | 8.1:+42010909 | MS.gene064444:CDS |
| GAATCATAGTTGATGAGACA+TGG | 0.618543 | 8.1:+42010456 | MS.gene064444:CDS |
| TATGTTGTTGAGGGTTGTGA+CGG | 0.623069 | 8.1:+42009198 | MS.gene064444:CDS |
| CTAACTTGGGTCACGAACAG+TGG | 0.644352 | 8.1:-42008980 | None:intergenic |
| GAGGTTGCAACTCTTTAAGG+CGG | 0.649841 | 8.1:+42009149 | MS.gene064444:CDS |
| AAATGAAAACAGCATTGACA+TGG | 0.650659 | 8.1:+42010885 | MS.gene064444:CDS |
| CTCTGACAGTGTAACCACGT+TGG | 0.665690 | 8.1:-42008957 | None:intergenic |
| GGTTGCTATTAACCCAACAA+TGG | 0.678942 | 8.1:+42010906 | MS.gene064444:CDS |
| GTTAAGTTTCTCCTCCAACG+TGG | 0.706690 | 8.1:+42008943 | MS.gene064444:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAATAGATAAAAATATT+TGG | - | chr8.1:42011860-42011879 | None:intergenic | 10.0% |
| !! | TCATAATATATAATGAAATA+TGG | + | chr8.1:42010690-42010709 | MS.gene064444:intron | 10.0% |
| !!! | ACTCTTTATAAAAATATTTT+GGG | + | chr8.1:42009433-42009452 | MS.gene064444:intron | 10.0% |
| !! | AAAAGATTCCTAATTAAATA+AGG | + | chr8.1:42010660-42010679 | MS.gene064444:intron | 15.0% |
| !! | AAATTAAGAACTAAGAAAAT+TGG | + | chr8.1:42010104-42010123 | MS.gene064444:intron | 15.0% |
| !! | AAGAAAAATTACCATTTATT+AGG | - | chr8.1:42010987-42011006 | None:intergenic | 15.0% |
| !! | AAGTAATATAATATATTGGA+TGG | + | chr8.1:42009998-42010017 | MS.gene064444:intron | 15.0% |
| !! | AATTAAGAACTAAGAAAATT+GGG | + | chr8.1:42010105-42010124 | MS.gene064444:intron | 15.0% |
| !! | ATTGATATTAGATAAGATTT+AGG | + | chr8.1:42011880-42011899 | MS.gene064444:intron | 15.0% |
| !!! | ATAAATGGTAATTTTTCTTT+AGG | + | chr8.1:42010988-42011007 | MS.gene064444:intron | 15.0% |
| !!! | CACTCTTTATAAAAATATTT+TGG | + | chr8.1:42009432-42009451 | MS.gene064444:intron | 15.0% |
| !!! | GTAAAATAATAATACAGTTT+TGG | + | chr8.1:42009875-42009894 | MS.gene064444:intron | 15.0% |
| !!! | GTAAAATGTAAATGAAATTT+TGG | + | chr8.1:42009651-42009670 | MS.gene064444:intron | 15.0% |
| !!! | TTTCATTTTGAATAACTTTT+AGG | - | chr8.1:42010530-42010549 | None:intergenic | 15.0% |
| !! | AAAGTTTAATAAACTGCTAA+CGG | + | chr8.1:42011622-42011641 | MS.gene064444:intron | 20.0% |
| !! | AATTTAAAAGAAACTCAAAG+AGG | + | chr8.1:42011505-42011524 | MS.gene064444:intron | 20.0% |
| !! | ATAACATTTATAGTGATTGT+TGG | + | chr8.1:42011954-42011973 | MS.gene064444:intron | 20.0% |
| !! | ATCATTAACAAAATCACAAA+GGG | - | chr8.1:42011251-42011270 | None:intergenic | 20.0% |
| !! | ATGATAGATTTGATAAAGAA+TGG | + | chr8.1:42011266-42011285 | MS.gene064444:intron | 20.0% |
| !! | ATTAAGAACTAAGAAAATTG+GGG | + | chr8.1:42010106-42010125 | MS.gene064444:intron | 20.0% |
| !! | CGTGAAGTAATATAATATAT+TGG | + | chr8.1:42009994-42010013 | MS.gene064444:intron | 20.0% |
| !! | CTTTGATTAATCAATAATAG+TGG | + | chr8.1:42012069-42012088 | MS.gene064444:intron | 20.0% |
| !! | GACATATTAAAGACAAATAT+TGG | - | chr8.1:42012016-42012035 | None:intergenic | 20.0% |
| !! | TATCATTAACAAAATCACAA+AGG | - | chr8.1:42011252-42011271 | None:intergenic | 20.0% |
| !!! | AAAAAGCTTATATTAGTTTG+TGG | + | chr8.1:42011051-42011070 | MS.gene064444:intron | 20.0% |
| !!! | ACTTGTTTCCTTATTTAATT+AGG | - | chr8.1:42010671-42010690 | None:intergenic | 20.0% |
| !!! | ACTTTTGATTTCTTTATTTC+AGG | + | chr8.1:42010298-42010317 | MS.gene064444:intron | 20.0% |
| !!! | ATAACAACTTTTTGAATTGT+TGG | + | chr8.1:42012160-42012179 | MS.gene064444:intron | 20.0% |
| !!! | ATCTTTTGTAATATCATTCA+AGG | - | chr8.1:42010647-42010666 | None:intergenic | 20.0% |
| !!! | CCAATTTTAAACCTAATAAA+TGG | + | chr8.1:42010973-42010992 | MS.gene064444:CDS | 20.0% |
| !!! | CCATTTATTAGGTTTAAAAT+TGG | - | chr8.1:42010976-42010995 | None:intergenic | 20.0% |
| !!! | TCTATTTGTGTTATTAGTTA+TGG | + | chr8.1:42010815-42010834 | MS.gene064444:intron | 20.0% |
| ! | AAGTTGTTATATTATGCAAG+AGG | - | chr8.1:42012150-42012169 | None:intergenic | 25.0% |
| ! | ATAAAATTGTACACATGTTG+AGG | - | chr8.1:42011790-42011809 | None:intergenic | 25.0% |
| ! | ATACACAAAAACACATGAAA+TGG | + | chr8.1:42010077-42010096 | MS.gene064444:intron | 25.0% |
| ! | ATGGACATTTGCTTAATAAT+TGG | + | chr8.1:42009785-42009804 | MS.gene064444:intron | 25.0% |
| ! | GTCTTTAATATGTCATTGAA+TGG | + | chr8.1:42012022-42012041 | MS.gene064444:intron | 25.0% |
| ! | TCATTAACAAAATCACAAAG+GGG | - | chr8.1:42011250-42011269 | None:intergenic | 25.0% |
| ! | TCTCAACAAGATAATAACTT+AGG | + | chr8.1:42011192-42011211 | MS.gene064444:intron | 25.0% |
| ! | TGAAAATCAATTAACGTTGA+AGG | - | chr8.1:42009575-42009594 | None:intergenic | 25.0% |
| ! | TTCATTGTTACAACTATTGA+AGG | + | chr8.1:42011928-42011947 | MS.gene064444:intron | 25.0% |
| ! | TTGTGTATAAATCGTTCAAT+TGG | + | chr8.1:42009285-42009304 | MS.gene064444:intron | 25.0% |
| !! | AATGGTAATTTTTCTTTAGG+AGG | + | chr8.1:42010991-42011010 | MS.gene064444:intron | 25.0% |
| !! | GTTTTCATTTACAAATTTCC+AGG | - | chr8.1:42010875-42010894 | None:intergenic | 25.0% |
| !! | TGTCTGAAATTTGTAAAGTT+GGG | - | chr8.1:42012352-42012371 | None:intergenic | 25.0% |
| !! | TGTGCTGATGAATTTATATA+AGG | - | chr8.1:42009017-42009036 | None:intergenic | 25.0% |
| !! | TTGTCTGAAATTTGTAAAGT+TGG | - | chr8.1:42012353-42012372 | None:intergenic | 25.0% |
| !!! | ACCAATTTTAGAGTTTTGAA+TGG | + | chr8.1:42009920-42009939 | MS.gene064444:intron | 25.0% |
| !!! | CCAATTTTAGAGTTTTGAAT+GGG | + | chr8.1:42009921-42009940 | MS.gene064444:intron | 25.0% |
| !!! | CGTTTTAAAAATCACTTAAC+TGG | - | chr8.1:42011651-42011670 | None:intergenic | 25.0% |
| !!! | GTTAAGTGATTTTTAAAACG+TGG | + | chr8.1:42011651-42011670 | MS.gene064444:intron | 25.0% |
| !!! | TAAATTTTGTTTCATTTCCC+TGG | - | chr8.1:42011491-42011510 | None:intergenic | 25.0% |
| !!! | TTGTTATTAGGTTTTATACC+CGG | + | chr8.1:42009313-42009332 | MS.gene064444:intron | 25.0% |
| !!! | TTTTGAAATGATGAAAGACA+CGG | - | chr8.1:42009845-42009864 | None:intergenic | 25.0% |
| AAAACCAATTTGTAAGGTGA+GGG | + | chr8.1:42009399-42009418 | MS.gene064444:intron | 30.0% | |
| AACATGTGTTTGTGTATGAA+AGG | - | chr8.1:42009631-42009650 | None:intergenic | 30.0% | |
| AACTCAAGTTACACATTGAA+AGG | - | chr8.1:42009467-42009486 | None:intergenic | 30.0% | |
| ACCAAATAGCTGAAACATAA+AGG | - | chr8.1:42009050-42009069 | None:intergenic | 30.0% | |
| ACGATTTATACACAATAGCA+TGG | - | chr8.1:42009280-42009299 | None:intergenic | 30.0% | |
| AGATTGTGTTTGAATACGAA+AGG | - | chr8.1:42011466-42011485 | None:intergenic | 30.0% | |
| AGATTTATGTAGGGAATCAA+AGG | + | chr8.1:42010490-42010509 | MS.gene064444:CDS | 30.0% | |
| AGTAACATAAGTTGTTCCTT+TGG | - | chr8.1:42010723-42010742 | None:intergenic | 30.0% | |
| ATAATTATGCTCTTGAGTCT+TGG | - | chr8.1:42009710-42009729 | None:intergenic | 30.0% | |
| ATAGAAGTAGTCAAGAAAGT+TGG | - | chr8.1:42010800-42010819 | None:intergenic | 30.0% | |
| CCTTACAAAACCAATTTGTA+AGG | + | chr8.1:42009393-42009412 | MS.gene064444:intron | 30.0% | |
| GAAATATGGAACTAATCCAA+AGG | + | chr8.1:42010704-42010723 | MS.gene064444:intron | 30.0% | |
| GATTGTGTTTGAATACGAAA+GGG | - | chr8.1:42011465-42011484 | None:intergenic | 30.0% | |
| TAATTATGCTCTTGAGTCTT+GGG | - | chr8.1:42009709-42009728 | None:intergenic | 30.0% | |
| TCCATTTATACTACCAAGTT+GGG | + | chr8.1:42010021-42010040 | MS.gene064444:intron | 30.0% | |
| TCCTTTATGTTTCAGCTATT+TGG | + | chr8.1:42009046-42009065 | MS.gene064444:intron | 30.0% | |
| TTCAGATCCAGATTTATGTA+GGG | + | chr8.1:42010481-42010500 | MS.gene064444:CDS | 30.0% | |
| TTCCAAATAAAGCATATGGA+TGG | + | chr8.1:42012198-42012217 | MS.gene064444:CDS | 30.0% | |
| TTTCAGATCCAGATTTATGT+AGG | + | chr8.1:42010480-42010499 | MS.gene064444:CDS | 30.0% | |
| TTTGATTCCCTACATAAATC+TGG | - | chr8.1:42010491-42010510 | None:intergenic | 30.0% | |
| ! | AATGTGGTTTATCTGAAGTT+AGG | + | chr8.1:42010584-42010603 | MS.gene064444:intron | 30.0% |
| ! | ACTATGATTCCAGGATTTTT+CGG | - | chr8.1:42010446-42010465 | None:intergenic | 30.0% |
| ! | AGACTCAAGAGCATAATTAT+CGG | + | chr8.1:42009710-42009729 | MS.gene064444:intron | 30.0% |
| ! | CCTTTTCCAAATAAAGCATA+TGG | + | chr8.1:42012194-42012213 | MS.gene064444:CDS | 30.0% |
| ! | TGGGACATGTTATTTAAATG+TGG | + | chr8.1:42010568-42010587 | MS.gene064444:intron | 30.0% |
| ! | TTTTCTTTATGCTACACTTC+TGG | + | chr8.1:42011216-42011235 | MS.gene064444:intron | 30.0% |
| !! | AAATGAAAACAGCATTGACA+TGG | + | chr8.1:42010885-42010904 | MS.gene064444:CDS | 30.0% |
| !! | CATGTGTTTTTGTGTATGAA+AGG | - | chr8.1:42010074-42010093 | None:intergenic | 30.0% |
| !! | CCATATGCTTTATTTGGAAA+AGG | - | chr8.1:42012197-42012216 | None:intergenic | 30.0% |
| !! | CCCATTCAAAACTCTAAAAT+TGG | - | chr8.1:42009924-42009943 | None:intergenic | 30.0% |
| !!! | ATTTTTAAAACGTGGTGTCT+TGG | + | chr8.1:42011659-42011678 | MS.gene064444:intron | 30.0% |
| !!! | ATTTTTCTTTAGGAGGCATT+TGG | + | chr8.1:42010998-42011017 | MS.gene064444:intron | 30.0% |
| !!! | CCTTACAAATTGGTTTTGTA+AGG | - | chr8.1:42009396-42009415 | None:intergenic | 30.0% |
| AAACTTGAAGCTCTTGAAGT+TGG | + | chr8.1:42010548-42010567 | MS.gene064444:intron | 35.0% | |
| AAAGTTAATAGCGCATAGAG+TGG | - | chr8.1:42010283-42010302 | None:intergenic | 35.0% | |
| AACTTGAAGCTCTTGAAGTT+GGG | + | chr8.1:42010549-42010568 | MS.gene064444:intron | 35.0% | |
| AAGATAACTCGTTTCACAGA+TGG | - | chr8.1:42010386-42010405 | None:intergenic | 35.0% | |
| AGATTATGACTGATAGCAAG+AGG | - | chr8.1:42011992-42012011 | None:intergenic | 35.0% | |
| AGCTAGTGGAAGATATTGTT+TGG | + | chr8.1:42012274-42012293 | MS.gene064444:CDS | 35.0% | |
| ATTCAAACACAATCTCTCCA+GGG | + | chr8.1:42011471-42011490 | MS.gene064444:intron | 35.0% | |
| CAAAACCAATTTGTAAGGTG+AGG | + | chr8.1:42009398-42009417 | MS.gene064444:intron | 35.0% | |
| CATTCCTCATAAGAGAATGA+GGG | + | chr8.1:42011734-42011753 | MS.gene064444:intron | 35.0% | |
| CTGCAGTTGTATATGATACA+AGG | + | chr8.1:42010420-42010439 | MS.gene064444:CDS | 35.0% | |
| GATTATGACTGATAGCAAGA+GGG | - | chr8.1:42011991-42012010 | None:intergenic | 35.0% | |
| GGAACTTCAATTTGAAAGTG+TGG | - | chr8.1:42010262-42010281 | None:intergenic | 35.0% | |
| GGCATCACTCGAAAAATTAA+TGG | + | chr8.1:42011437-42011456 | MS.gene064444:intron | 35.0% | |
| GTCCATTTATACTACCAAGT+TGG | + | chr8.1:42010020-42010039 | MS.gene064444:intron | 35.0% | |
| TATTCAAACACAATCTCTCC+AGG | + | chr8.1:42011470-42011489 | MS.gene064444:intron | 35.0% | |
| TCAGAGTCTAAGAATAAGCT+AGG | - | chr8.1:42009339-42009358 | None:intergenic | 35.0% | |
| TCATTTACGACAAAACGAAC+AGG | - | chr8.1:42009243-42009262 | None:intergenic | 35.0% | |
| TCCAACATAACTTTGCTGAA+GGG | - | chr8.1:42011145-42011164 | None:intergenic | 35.0% | |
| TCCTTTGACTATGTTGTTGA+GGG | + | chr8.1:42009189-42009208 | MS.gene064444:CDS | 35.0% | |
| TGCACACCAATCATTCATAA+GGG | - | chr8.1:42009075-42009094 | None:intergenic | 35.0% | |
| TGGTTTCCCTTATGAATGAT+TGG | + | chr8.1:42009066-42009085 | MS.gene064444:intron | 35.0% | |
| TTCCAACATAACTTTGCTGA+AGG | - | chr8.1:42011146-42011165 | None:intergenic | 35.0% | |
| TTCCTTTGACTATGTTGTTG+AGG | + | chr8.1:42009188-42009207 | MS.gene064444:CDS | 35.0% | |
| TTCTCTTATGAGGAATGCTA+AGG | - | chr8.1:42011731-42011750 | None:intergenic | 35.0% | |
| TTGCACACCAATCATTCATA+AGG | - | chr8.1:42009076-42009095 | None:intergenic | 35.0% | |
| ! | ACCCAACTTGGTAGTATAAA+TGG | - | chr8.1:42010025-42010044 | None:intergenic | 35.0% |
| ! | AGAATTCGTCTTTTTCTGTC+AGG | + | chr8.1:42010212-42010231 | MS.gene064444:intron | 35.0% |
| ! | ATTTATACTACCAAGTTGGG+TGG | + | chr8.1:42010024-42010043 | MS.gene064444:intron | 35.0% |
| ! | CACCATCCATATGCTTTATT+TGG | - | chr8.1:42012203-42012222 | None:intergenic | 35.0% |
| ! | CTTTTTGAATTGTTGGATGC+AGG | + | chr8.1:42012167-42012186 | MS.gene064444:intron | 35.0% |
| ! | GGTAAAGTGATTTTCATACC+AGG | + | chr8.1:42009672-42009691 | MS.gene064444:intron | 35.0% |
| ! | TCAAGAGCATAATTATCGGT+GGG | + | chr8.1:42009714-42009733 | MS.gene064444:intron | 35.0% |
| ! | TGATTTTCATACCAGGTTAG+CGG | + | chr8.1:42009679-42009698 | MS.gene064444:intron | 35.0% |
| ! | TGCAATTAGTTTGAACCGTT+TGG | + | chr8.1:42011416-42011435 | MS.gene064444:intron | 35.0% |
| !! | CAATTGGTGTGCTTGTTATT+AGG | + | chr8.1:42009301-42009320 | MS.gene064444:intron | 35.0% |
| !! | GAATCATAGTTGATGAGACA+TGG | + | chr8.1:42010456-42010475 | MS.gene064444:CDS | 35.0% |
| !! | TGCAAATTTTAGTCCATGTG+TGG | + | chr8.1:42009743-42009762 | MS.gene064444:intron | 35.0% |
| !!! | AGAGTTTTGAATGGGTTGTA+TGG | + | chr8.1:42009929-42009948 | MS.gene064444:intron | 35.0% |
| !!! | ATTTTTCGAGTGATGCCAAA+CGG | - | chr8.1:42011434-42011453 | None:intergenic | 35.0% |
| AATAGCATGGAATGAACCTG+TGG | - | chr8.1:42009267-42009286 | None:intergenic | 40.0% | |
| AATCATCCTCGAGCAATTGA+AGG | + | chr8.1:42011392-42011411 | MS.gene064444:intron | 40.0% | |
| AATTTGTAAGGTGAGGGTGA+GGG | + | chr8.1:42009405-42009424 | MS.gene064444:intron | 40.0% | |
| ACCCTCAACAACATAGTCAA+AGG | - | chr8.1:42009193-42009212 | None:intergenic | 40.0% | |
| AGCAAGTGGTCAACCTTATT+AGG | - | chr8.1:42009108-42009127 | None:intergenic | 40.0% | |
| AGTCTAAGAATAAGCTAGGC+CGG | - | chr8.1:42009335-42009354 | None:intergenic | 40.0% | |
| AGTCTCATACGCCAGAATAT+GGG | - | chr8.1:42012249-42012268 | None:intergenic | 40.0% | |
| ATACTCTTGTAGTCTCAGTC+AGG | - | chr8.1:42011835-42011854 | None:intergenic | 40.0% | |
| ATAGCATGGAATGAACCTGT+GGG | - | chr8.1:42009266-42009285 | None:intergenic | 40.0% | |
| ATATTGTTTGGCTGAGAGAG+TGG | + | chr8.1:42012286-42012305 | MS.gene064444:CDS | 40.0% | |
| CACCATCAAGTTTAAGCAAG+TGG | - | chr8.1:42009122-42009141 | None:intergenic | 40.0% | |
| CGAATTCTCACAGAAATAGC+TGG | - | chr8.1:42010200-42010219 | None:intergenic | 40.0% | |
| CTCTTACAACCAGAGCTTAA+CGG | + | chr8.1:42010940-42010959 | MS.gene064444:CDS | 40.0% | |
| GACCACTTGCTTAAACTTGA+TGG | + | chr8.1:42009117-42009136 | MS.gene064444:CDS | 40.0% | |
| GCAAGCAGGTAATCCTAATA+AGG | + | chr8.1:42009092-42009111 | MS.gene064444:intron | 40.0% | |
| GCATTCCTCATAAGAGAATG+AGG | + | chr8.1:42011733-42011752 | MS.gene064444:intron | 40.0% | |
| GGTACGAAGAAGTTCATTGA+CGG | + | chr8.1:42011544-42011563 | MS.gene064444:intron | 40.0% | |
| GTACACACTTTCGAAGACTT+TGG | + | chr8.1:42010837-42010856 | MS.gene064444:CDS | 40.0% | |
| GTCTCATCAACTATGATTCC+AGG | - | chr8.1:42010455-42010474 | None:intergenic | 40.0% | |
| TATGCCCTCATTCTCTTATG+AGG | - | chr8.1:42011741-42011760 | None:intergenic | 40.0% | |
| TATGTTGTTGAGGGTTGTGA+CGG | + | chr8.1:42009198-42009217 | MS.gene064444:CDS | 40.0% | |
| TGCTATTAACCCAACAATGG+TGG | + | chr8.1:42010909-42010928 | MS.gene064444:CDS | 40.0% | |
| TTAAGCAGACACAGATGAAC+TGG | - | chr8.1:42010144-42010163 | None:intergenic | 40.0% | |
| ! | CTCAAGAGCATAATTATCGG+TGG | + | chr8.1:42009713-42009732 | MS.gene064444:intron | 40.0% |
| ! | GGTTGCTATTAACCCAACAA+TGG | + | chr8.1:42010906-42010925 | MS.gene064444:CDS | 40.0% |
| ! | TTAAGCTCTGGTTGTAAGAG+AGG | - | chr8.1:42010940-42010959 | None:intergenic | 40.0% |
| ! | TTTTGTCGTAAATGACCCAC+AGG | + | chr8.1:42009248-42009267 | MS.gene064444:CDS | 40.0% |
| !! | AGGAGAAAGAAGCACTAACT+TGG | - | chr8.1:42008997-42009016 | None:intergenic | 40.0% |
| !! | GAAACTCAAAGAGGTGTTGA+TGG | + | chr8.1:42011514-42011533 | MS.gene064444:intron | 40.0% |
| !! | GCTTAAACTTGATGGTGCAA+AGG | + | chr8.1:42009125-42009144 | MS.gene064444:CDS | 40.0% |
| !! | GGAGAAAGAAGCACTAACTT+GGG | - | chr8.1:42008996-42009015 | None:intergenic | 40.0% |
| !! | TTGGTAGCTTTTCTTGACCA+CGG | + | chr8.1:42009804-42009823 | MS.gene064444:intron | 40.0% |
| !!! | CTGCTGGTTTTATTGCTTCA+TGG | + | chr8.1:42008917-42008936 | MS.gene064444:CDS | 40.0% |
| AAAGACACGGTTGCTGAAGT+TGG | - | chr8.1:42009832-42009851 | None:intergenic | 45.0% | |
| AACGAACAGGTGAAGCAGTA+TGG | - | chr8.1:42009230-42009249 | None:intergenic | 45.0% | |
| AAGAAGTTCATTGACGGTGG+GGG | + | chr8.1:42011550-42011569 | MS.gene064444:intron | 45.0% | |
| AAGTTGGGTGGCATGAATGT+GGG | + | chr8.1:42010036-42010055 | MS.gene064444:intron | 45.0% | |
| ACGAAGAAGTTCATTGACGG+TGG | + | chr8.1:42011547-42011566 | MS.gene064444:intron | 45.0% | |
| ACTTTCGAAGACTTTGGCTG+AGG | + | chr8.1:42010843-42010862 | MS.gene064444:CDS | 45.0% | |
| AGAGCATAATTATCGGTGGG+TGG | + | chr8.1:42009717-42009736 | MS.gene064444:intron | 45.0% | |
| ATTAACCCAACAATGGTGGC+AGG | + | chr8.1:42010913-42010932 | MS.gene064444:CDS | 45.0% | |
| CAATTTGTAAGGTGAGGGTG+AGG | + | chr8.1:42009404-42009423 | MS.gene064444:intron | 45.0% | |
| CAGTCTCATACGCCAGAATA+TGG | - | chr8.1:42012250-42012269 | None:intergenic | 45.0% | |
| CGAAGAAGTTCATTGACGGT+GGG | + | chr8.1:42011548-42011567 | MS.gene064444:intron | 45.0% | |
| CTCACCCTCACCTTACAAAT+TGG | - | chr8.1:42009406-42009425 | None:intergenic | 45.0% | |
| GAAGAAGTTCATTGACGGTG+GGG | + | chr8.1:42011549-42011568 | MS.gene064444:intron | 45.0% | |
| GATACAAGGCCGAAAAATCC+TGG | + | chr8.1:42010434-42010453 | MS.gene064444:CDS | 45.0% | |
| GCAAGAGGACAATTCTTGTC+TGG | - | chr8.1:42012135-42012154 | None:intergenic | 45.0% | |
| GCCCTTCAGCAAAGTTATGT+TGG | + | chr8.1:42011141-42011160 | MS.gene064444:intron | 45.0% | |
| GGAGAGGTTGCAACTCTTTA+AGG | + | chr8.1:42009146-42009165 | MS.gene064444:CDS | 45.0% | |
| GTCTAAGAATAAGCTAGGCC+GGG | - | chr8.1:42009334-42009353 | None:intergenic | 45.0% | |
| GTTAAGTTTCTCCTCCAACG+TGG | + | chr8.1:42008943-42008962 | MS.gene064444:CDS | 45.0% | |
| TATGAGACTGCTTCAGCTAG+TGG | + | chr8.1:42012260-42012279 | MS.gene064444:CDS | 45.0% | |
| TCAACACTTCCGTTAAGCTC+TGG | - | chr8.1:42010952-42010971 | None:intergenic | 45.0% | |
| TGAATGATTGGTGTGCAAGC+AGG | + | chr8.1:42009078-42009097 | MS.gene064444:intron | 45.0% | |
| TGTCTTGGACCAATGGTTGA+GGG | + | chr8.1:42011674-42011693 | MS.gene064444:intron | 45.0% | |
| TGTTGCTAACGCCCATATTC+TGG | + | chr8.1:42012235-42012254 | MS.gene064444:CDS | 45.0% | |
| TTAAGAGTTCCCTTCAGTGC+CGG | - | chr8.1:42010338-42010357 | None:intergenic | 45.0% | |
| TTGAACACTCCCTCAACCAT+TGG | - | chr8.1:42011686-42011705 | None:intergenic | 45.0% | |
| TTGCAACCTTCAATTGCTCG+AGG | - | chr8.1:42011401-42011420 | None:intergenic | 45.0% | |
| ! | CTTTGCTGAAGGGCATGTTA+AGG | - | chr8.1:42011135-42011154 | None:intergenic | 45.0% |
| ! | GAGGTTGCAACTCTTTAAGG+CGG | + | chr8.1:42009149-42009168 | MS.gene064444:CDS | 45.0% |
| ! | TTGATTGATCCGGCACTGAA+GGG | + | chr8.1:42010326-42010345 | MS.gene064444:CDS | 45.0% |
| !! | AACTTGATGGTGCAAAGGAG+AGG | + | chr8.1:42009130-42009149 | MS.gene064444:CDS | 45.0% |
| !! | ACTCAAAGAGGTGTTGATGG+TGG | + | chr8.1:42011517-42011536 | MS.gene064444:intron | 45.0% |
| !! | ACTCTTTAAGGCGGATCTCT+TGG | + | chr8.1:42009158-42009177 | MS.gene064444:CDS | 45.0% |
| !! | ATGGTTGAGGGAGTGTTCAA+AGG | + | chr8.1:42011686-42011705 | MS.gene064444:intron | 45.0% |
| !! | CTCAAAGAGGTGTTGATGGT+GGG | + | chr8.1:42011518-42011537 | MS.gene064444:intron | 45.0% |
| !! | TCAGGCTGAGTTGATTGATC+CGG | + | chr8.1:42010316-42010335 | MS.gene064444:intron | 45.0% |
| AACGTGGTGTCTTGGACCAA+TGG | + | chr8.1:42011667-42011686 | MS.gene064444:intron | 50.0% | |
| AAGGCGGATCTCTTGGAAGA+AGG | + | chr8.1:42009165-42009184 | MS.gene064444:CDS | 50.0% | |
| AGAAGTTCATTGACGGTGGG+GGG | + | chr8.1:42011551-42011570 | MS.gene064444:intron | 50.0% | |
| AGTTGGGTGGCATGAATGTG+GGG | + | chr8.1:42010037-42010056 | MS.gene064444:intron | 50.0% | |
| CACATTCATGCCACCCAACT+TGG | - | chr8.1:42010037-42010056 | None:intergenic | 50.0% | |
| CTAACTTGGGTCACGAACAG+TGG | - | chr8.1:42008983-42009002 | None:intergenic | 50.0% | |
| CTCTGACAGTGTAACCACGT+TGG | - | chr8.1:42008960-42008979 | None:intergenic | 50.0% | |
| GGAAAAGTGGTGTGTGTGAC+AGG | + | chr8.1:42008892-42008911 | MS.gene064444:CDS | 50.0% | |
| GTGTCTTGGACCAATGGTTG+AGG | + | chr8.1:42011673-42011692 | MS.gene064444:intron | 50.0% | |
| TAGTCTCAGTCAGGCATGAC+AGG | - | chr8.1:42011826-42011845 | None:intergenic | 50.0% | |
| TGACAGTGTAACCACGTTGG+AGG | - | chr8.1:42008957-42008976 | None:intergenic | 50.0% | |
| ! | CAAGTTGGGTGGCATGAATG+TGG | + | chr8.1:42010035-42010054 | MS.gene064444:intron | 50.0% |
| ! | GTTGATTGATCCGGCACTGA+AGG | + | chr8.1:42010325-42010344 | MS.gene064444:CDS | 50.0% |
| !! | AAGAGGTGTTGATGGTGGGT+TGG | + | chr8.1:42011522-42011541 | MS.gene064444:intron | 50.0% |
| !! | AGAGGTGTTGATGGTGGGTT+GGG | + | chr8.1:42011523-42011542 | MS.gene064444:intron | 50.0% |
| AGAGGTCCTGCCACCATTGT+TGG | - | chr8.1:42010922-42010941 | None:intergenic | 55.0% | |
| CAACTGCTGTCAGAGAGGGA+TGG | + | chr8.1:42009766-42009785 | MS.gene064444:intron | 55.0% | |
| CTGACAGCAGTTGCCACACA+TGG | - | chr8.1:42009759-42009778 | None:intergenic | 55.0% | |
| GAAGTTCATTGACGGTGGGG+GGG | + | chr8.1:42011552-42011571 | MS.gene064444:intron | 55.0% | |
| GAGGTCCTGCCACCATTGTT+GGG | - | chr8.1:42010921-42010940 | None:intergenic | 55.0% | |
| GGTTGCTGAAGTTGGAACCG+TGG | - | chr8.1:42009824-42009843 | None:intergenic | 55.0% | |
| GTGGCAACTGCTGTCAGAGA+GGG | + | chr8.1:42009762-42009781 | MS.gene064444:intron | 55.0% | |
| TCTTGGGATCTCCGCTAACC+TGG | - | chr8.1:42009693-42009712 | None:intergenic | 55.0% | |
| TGTGGCAACTGCTGTCAGAG+AGG | + | chr8.1:42009761-42009780 | MS.gene064444:intron | 55.0% | |
| TTCATTGACGGTGGGGGGGT+GGG | + | chr8.1:42011556-42011575 | MS.gene064444:intron | 60.0% | |
| ! | GTGTGTGTGACAGGTGCTGC+TGG | + | chr8.1:42008901-42008920 | MS.gene064444:CDS | 60.0% |
| CTTTGGCTGAGGCTGCTGCC+TGG | + | chr8.1:42010854-42010873 | MS.gene064444:CDS | 65.0% | |
| GTTCATTGACGGTGGGGGGG+TGG | + | chr8.1:42011555-42011574 | MS.gene064444:intron | 65.0% | |
| ATTGACGGTGGGGGGGTGGG+TGG | + | chr8.1:42011559-42011578 | MS.gene064444:intron | 70.0% | |
| CGGTGGGGGGGTGGGTGGAA+AGG | + | chr8.1:42011564-42011583 | MS.gene064444:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 42008880 | 42012372 | 42008880 | ID=MS.gene064444 |
| chr8.1 | mRNA | 42008880 | 42012372 | 42008880 | ID=MS.gene064444.t1;Parent=MS.gene064444 |
| chr8.1 | exon | 42008880 | 42008997 | 42008880 | ID=MS.gene064444.t1.exon1;Parent=MS.gene064444.t1 |
| chr8.1 | CDS | 42008880 | 42008997 | 42008880 | ID=cds.MS.gene064444.t1;Parent=MS.gene064444.t1 |
| chr8.1 | exon | 42009100 | 42009269 | 42009100 | ID=MS.gene064444.t1.exon2;Parent=MS.gene064444.t1 |
| chr8.1 | CDS | 42009100 | 42009269 | 42009100 | ID=cds.MS.gene064444.t1;Parent=MS.gene064444.t1 |
| chr8.1 | exon | 42010320 | 42010511 | 42010320 | ID=MS.gene064444.t1.exon3;Parent=MS.gene064444.t1 |
| chr8.1 | CDS | 42010320 | 42010511 | 42010320 | ID=cds.MS.gene064444.t1;Parent=MS.gene064444.t1 |
| chr8.1 | exon | 42010832 | 42010994 | 42010832 | ID=MS.gene064444.t1.exon4;Parent=MS.gene064444.t1 |
| chr8.1 | CDS | 42010832 | 42010994 | 42010832 | ID=cds.MS.gene064444.t1;Parent=MS.gene064444.t1 |
| chr8.1 | exon | 42012189 | 42012372 | 42012189 | ID=MS.gene064444.t1.exon5;Parent=MS.gene064444.t1 |
| chr8.1 | CDS | 42012189 | 42012372 | 42012189 | ID=cds.MS.gene064444.t1;Parent=MS.gene064444.t1 |
| Gene Sequence |
| Protein sequence |
