Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064659.t1 | XP_013462112.1 | 93.3 | 284 | 18 | 1 | 1 | 284 | 1 | 283 | 5.30E-120 | 440.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064659.t1 | Q9ZU65 | 63.5 | 63 | 23 | 0 | 202 | 264 | 229 | 291 | 8.9e-15 | 82.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064659.t1 | A0A072V2Q5 | 93.3 | 284 | 18 | 1 | 1 | 284 | 1 | 283 | 3.8e-120 | 440.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene064659.t1 | TF | OFP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055942 | MS.gene064659 | 0.817684 | 2.90E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064659.t1 | MTR_3g111780 | 94.366 | 284 | 15 | 1 | 1 | 284 | 1 | 283 | 2.06e-180 | 498 |
| MS.gene064659.t1 | MTR_8g103520 | 51.389 | 72 | 35 | 0 | 193 | 264 | 218 | 289 | 1.50e-20 | 89.4 |
| MS.gene064659.t1 | MTR_0907s0020 | 54.545 | 66 | 30 | 0 | 199 | 264 | 102 | 167 | 1.23e-19 | 84.7 |
| MS.gene064659.t1 | MTR_5g075210 | 43.000 | 100 | 57 | 0 | 164 | 263 | 245 | 344 | 4.89e-19 | 85.9 |
| MS.gene064659.t1 | MTR_7g072875 | 32.468 | 154 | 80 | 2 | 129 | 260 | 129 | 280 | 2.01e-18 | 83.6 |
| MS.gene064659.t1 | MTR_7g105790 | 53.623 | 69 | 32 | 0 | 202 | 270 | 113 | 181 | 6.05e-18 | 80.5 |
| MS.gene064659.t1 | MTR_4g052040 | 53.846 | 65 | 30 | 0 | 200 | 264 | 100 | 164 | 1.84e-17 | 78.6 |
| MS.gene064659.t1 | MTR_7g072630 | 26.829 | 287 | 155 | 8 | 27 | 260 | 58 | 342 | 4.44e-17 | 80.5 |
| MS.gene064659.t1 | MTR_5g079710 | 50.725 | 69 | 34 | 0 | 196 | 264 | 88 | 156 | 5.36e-17 | 79.0 |
| MS.gene064659.t1 | MTR_8g087530 | 47.692 | 65 | 34 | 0 | 199 | 263 | 258 | 322 | 6.48e-16 | 77.0 |
| MS.gene064659.t1 | MTR_2g018030 | 46.774 | 62 | 33 | 0 | 199 | 260 | 277 | 338 | 9.53e-16 | 76.6 |
| MS.gene064659.t1 | MTR_4g028930 | 50.820 | 61 | 30 | 0 | 200 | 260 | 315 | 375 | 6.92e-15 | 74.3 |
| MS.gene064659.t1 | MTR_4g052060 | 51.667 | 60 | 29 | 0 | 205 | 264 | 99 | 158 | 1.98e-13 | 67.8 |
| MS.gene064659.t1 | MTR_1g111640 | 45.161 | 62 | 34 | 0 | 198 | 259 | 136 | 197 | 3.74e-11 | 62.4 |
| MS.gene064659.t1 | MTR_4g132740 | 37.500 | 88 | 44 | 1 | 178 | 265 | 71 | 147 | 6.18e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064659.t1 | AT5G19650 | 62.121 | 66 | 25 | 0 | 199 | 264 | 154 | 219 | 7.03e-23 | 94.4 |
| MS.gene064659.t1 | AT2G18500 | 61.538 | 65 | 25 | 0 | 199 | 263 | 226 | 290 | 2.81e-20 | 89.0 |
| MS.gene064659.t1 | AT2G30400 | 50.000 | 70 | 35 | 0 | 194 | 263 | 247 | 316 | 1.65e-18 | 84.3 |
| MS.gene064659.t1 | AT3G52525 | 56.452 | 62 | 27 | 0 | 200 | 261 | 67 | 128 | 6.94e-18 | 79.3 |
| MS.gene064659.t1 | AT5G58360 | 53.731 | 67 | 31 | 0 | 197 | 263 | 222 | 288 | 2.07e-17 | 80.9 |
| MS.gene064659.t1 | AT2G36026 | 55.000 | 60 | 27 | 0 | 205 | 264 | 92 | 151 | 5.15e-17 | 77.4 |
| MS.gene064659.t1 | AT1G06920 | 33.010 | 103 | 64 | 1 | 167 | 264 | 206 | 308 | 4.60e-16 | 77.4 |
| MS.gene064659.t1 | AT5G01840 | 48.529 | 68 | 35 | 0 | 203 | 270 | 202 | 269 | 4.30e-15 | 73.9 |
| MS.gene064659.t1 | AT5G22240 | 44.118 | 68 | 38 | 0 | 196 | 263 | 93 | 160 | 1.19e-13 | 68.6 |
| MS.gene064659.t1 | AT4G18830 | 45.902 | 61 | 33 | 0 | 199 | 259 | 282 | 342 | 8.61e-12 | 65.1 |
Find 66 sgRNAs with CRISPR-Local
Find 70 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGGCAGGGCCTGGATTCC+CGG | 0.272464 | 3.4:+96928842 | None:intergenic |
| CTCAAATTATAGTGATAAAA+AGG | 0.274257 | 3.4:-96928538 | MS.gene064659:CDS |
| GGTCCATTCTTCTAGTACTA+TGG | 0.311039 | 3.4:-96928583 | MS.gene064659:CDS |
| GGGGAAAGAGGAAAGGTTAT+TGG | 0.328740 | 3.4:+96928863 | None:intergenic |
| TGCGAGCTTTCATGGAGATT+TGG | 0.332540 | 3.4:-96928161 | MS.gene064659:CDS |
| AGTAATTGTGCGAGCTTTCA+TGG | 0.344864 | 3.4:-96928169 | MS.gene064659:CDS |
| GACACGTTGCATTGGTGTTC+CGG | 0.349518 | 3.4:+96928753 | None:intergenic |
| CACCGGAGAAAGACGGTATA+TGG | 0.359937 | 3.4:+96928824 | None:intergenic |
| TCCTCTTTCCCCGGGAATCC+AGG | 0.367021 | 3.4:-96928852 | MS.gene064659:CDS |
| TTTGGCAACAAATGTTCGTT+TGG | 0.381425 | 3.4:-96928143 | MS.gene064659:CDS |
| GGCGACGAAGCAGGAAGGTT+TGG | 0.382600 | 3.4:+96928774 | None:intergenic |
| TTATCACTATAATTTGAGAT+AGG | 0.385663 | 3.4:+96928543 | None:intergenic |
| ATACCCTATGTCATATGCTT+TGG | 0.387292 | 3.4:+96928797 | None:intergenic |
| GGTAAAAGAAAGCTTTGCTT+TGG | 0.392617 | 3.4:-96928331 | MS.gene064659:CDS |
| AGTGAGGTTTCAAAGTATTA+CGG | 0.405418 | 3.4:-96928454 | MS.gene064659:CDS |
| ATTTAACTAGCTCGAATAGA+AGG | 0.424510 | 3.4:-96928506 | MS.gene064659:CDS |
| ACTTGACATAACCTTCGTTT+CGG | 0.428668 | 3.4:+96928368 | None:intergenic |
| GATGTCCGAGGCCAAGGACT+TGG | 0.437700 | 3.4:-96928241 | MS.gene064659:CDS |
| ATGGCAGGGCCTGGATTCCC+GGG | 0.439698 | 3.4:+96928843 | None:intergenic |
| GTTAGAGATGATAGAAGAGA+TGG | 0.441612 | 3.4:-96928265 | MS.gene064659:CDS |
| TTCTTGCTTAGCAAGATTCT+CGG | 0.449560 | 3.4:-96928616 | MS.gene064659:CDS |
| AATAACCTTTCCTCTTTCCC+CGG | 0.452894 | 3.4:-96928861 | MS.gene064659:CDS |
| GAAGGTTATGTCAAGTAGAA+TGG | 0.463702 | 3.4:-96928361 | MS.gene064659:CDS |
| GAAGGTTATGTCAAGTAGAA+TGG | 0.463702 | 3.4:-96928409 | MS.gene064659:CDS |
| CTATGGATAGTACTAAAGTT+AGG | 0.470027 | 3.4:-96928566 | MS.gene064659:CDS |
| CAATAGTTGCTCCAAGTCCT+TGG | 0.478606 | 3.4:+96928230 | None:intergenic |
| TCAAACAAATGTTCAAACTA+AGG | 0.481359 | 3.4:-96928097 | MS.gene064659:CDS |
| AGACGGTATATGGCAGGGCC+TGG | 0.484707 | 3.4:+96928834 | None:intergenic |
| ACTAGAAGAATGGACCTTCT+CGG | 0.488884 | 3.4:+96928590 | None:intergenic |
| GCCTGGATTCCCGGGGAAAG+AGG | 0.494617 | 3.4:+96928851 | None:intergenic |
| TATCCATAGTACTAGAAGAA+TGG | 0.495158 | 3.4:+96928580 | None:intergenic |
| AGAAACTCACTTCTTCTTGA+GGG | 0.501729 | 3.4:+96928678 | None:intergenic |
| TGGTGTTCCGGCGACGAAGC+AGG | 0.502249 | 3.4:+96928765 | None:intergenic |
| GATGGAGATGTCCGAGGCCA+AGG | 0.503048 | 3.4:-96928247 | MS.gene064659:CDS |
| TGCCATATACCGTCTTTCTC+CGG | 0.503136 | 3.4:-96928826 | MS.gene064659:CDS |
| GAGCGACACATTTGAAAAGA+AGG | 0.503682 | 3.4:+96928885 | None:intergenic |
| GTCAAGTAGAATGGAGGAGA+AGG | 0.514162 | 3.4:-96928352 | MS.gene064659:CDS |
| AAACCTTCCTGCTTCGTCGC+CGG | 0.514759 | 3.4:-96928772 | MS.gene064659:CDS |
| TTGCTCCAAGTCCTTGGCCT+CGG | 0.515968 | 3.4:+96928236 | None:intergenic |
| AGCGACACATTTGAAAAGAA+GGG | 0.522344 | 3.4:+96928886 | None:intergenic |
| GGAGAAAGACGGTATATGGC+AGG | 0.531009 | 3.4:+96928828 | None:intergenic |
| TAGAAACTCACTTCTTCTTG+AGG | 0.531127 | 3.4:+96928677 | None:intergenic |
| ATAACCTTTCCTCTTTCCCC+GGG | 0.540129 | 3.4:-96928860 | MS.gene064659:CDS |
| TCATATGCTTTGGAGTTCAC+CGG | 0.541099 | 3.4:+96928807 | None:intergenic |
| CTAAATTCTAGAGATTATCA+TGG | 0.544872 | 3.4:-96928192 | MS.gene064659:CDS |
| GATTTCTTGAAGTCTTCGTA+AGG | 0.562850 | 3.4:+96928291 | None:intergenic |
| AATTGATAAAATCAATGAAG+AGG | 0.573253 | 3.4:-96928655 | MS.gene064659:CDS |
| AAGATTCTCGGAAGCCGAGA+AGG | 0.578226 | 3.4:-96928604 | MS.gene064659:CDS |
| AACTCCAAAGCATATGACAT+AGG | 0.582440 | 3.4:-96928801 | MS.gene064659:CDS |
| TCTTTGATGACACGTTGCAT+TGG | 0.597146 | 3.4:+96928745 | None:intergenic |
| TCTTCTTGAGGGAACGTCGG+AGG | 0.601171 | 3.4:+96928689 | None:intergenic |
| ACTCCAAAGCATATGACATA+GGG | 0.601832 | 3.4:-96928800 | MS.gene064659:CDS |
| TCGAAGAGGAACCGAAACGA+AGG | 0.602284 | 3.4:-96928379 | MS.gene064659:CDS |
| TGAAGAATGTTGAGAGAGTG+AGG | 0.603540 | 3.4:-96928470 | MS.gene064659:CDS |
| ATTAAGAAAGTGAAATCCAA+AGG | 0.608408 | 3.4:-96928723 | MS.gene064659:CDS |
| TGGAGTTCACCGGAGAAAGA+CGG | 0.608559 | 3.4:+96928817 | None:intergenic |
| GTTCCGGCGACGAAGCAGGA+AGG | 0.630275 | 3.4:+96928769 | None:intergenic |
| GAGAAAGACGGTATATGGCA+GGG | 0.639308 | 3.4:+96928829 | None:intergenic |
| GATTCCCGGGGAAAGAGGAA+AGG | 0.642563 | 3.4:+96928856 | None:intergenic |
| ACTTCTTCTTGAGGGAACGT+CGG | 0.649804 | 3.4:+96928686 | None:intergenic |
| AGTATTACGGAGAATCAAAG+AGG | 0.650942 | 3.4:-96928441 | MS.gene064659:CDS |
| TGGCAGGGCCTGGATTCCCG+GGG | 0.653477 | 3.4:+96928844 | None:intergenic |
| GGTTATGTCAAGTAGAATGG+AGG | 0.656874 | 3.4:-96928358 | MS.gene064659:CDS |
| AGAATGGAAGAGAATCGAAG+AGG | 0.657497 | 3.4:-96928393 | MS.gene064659:CDS |
| TCAAAGAGGAAAAGAAACGA+AGG | 0.672215 | 3.4:-96928427 | MS.gene064659:CDS |
| AGAAGAGATGGAGATGTCCG+AGG | 0.675634 | 3.4:-96928253 | MS.gene064659:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGATAAAATCAATGAAG+AGG | - | chr3.4:96928346-96928365 | MS.gene064659:CDS | 20.0% |
| !! | CTCAAATTATAGTGATAAAA+AGG | - | chr3.4:96928463-96928482 | MS.gene064659:CDS | 20.0% |
| !!! | TTATCACTATAATTTGAGAT+AGG | + | chr3.4:96928461-96928480 | None:intergenic | 20.0% |
| ! | ATTAAGAAAGTGAAATCCAA+AGG | - | chr3.4:96928278-96928297 | MS.gene064659:CDS | 25.0% |
| ! | TCAAACAAATGTTCAAACTA+AGG | - | chr3.4:96928904-96928923 | MS.gene064659:CDS | 25.0% |
| !! | CTAAATTCTAGAGATTATCA+TGG | - | chr3.4:96928809-96928828 | MS.gene064659:CDS | 25.0% |
| !!! | TGAAGATTTTTTACTGACTT+AGG | + | chr3.4:96928887-96928906 | None:intergenic | 25.0% |
| ATTTAACTAGCTCGAATAGA+AGG | - | chr3.4:96928495-96928514 | MS.gene064659:CDS | 30.0% | |
| CTATGGATAGTACTAAAGTT+AGG | - | chr3.4:96928435-96928454 | MS.gene064659:CDS | 30.0% | |
| TATCCATAGTACTAGAAGAA+TGG | + | chr3.4:96928424-96928443 | None:intergenic | 30.0% | |
| ! | AGTGAGGTTTCAAAGTATTA+CGG | - | chr3.4:96928547-96928566 | MS.gene064659:CDS | 30.0% |
| AACTCCAAAGCATATGACAT+AGG | - | chr3.4:96928200-96928219 | MS.gene064659:CDS | 35.0% | |
| ACTCCAAAGCATATGACATA+GGG | - | chr3.4:96928201-96928220 | MS.gene064659:CDS | 35.0% | |
| ACTTGACATAACCTTCGTTT+CGG | + | chr3.4:96928588-96928607 | None:intergenic | 35.0% | |
| AGAAACTCACTTCTTCTTGA+GGG | + | chr3.4:96928326-96928345 | None:intergenic | 35.0% | |
| AGCGACACATTTGAAAAGAA+GGG | + | chr3.4:96928118-96928137 | None:intergenic | 35.0% | |
| AGTATTACGGAGAATCAAAG+AGG | - | chr3.4:96928560-96928579 | MS.gene064659:CDS | 35.0% | |
| ATACCCTATGTCATATGCTT+TGG | + | chr3.4:96928207-96928226 | None:intergenic | 35.0% | |
| GAAGGTTATGTCAAGTAGAA+TGG | - | chr3.4:96928592-96928611 | MS.gene064659:CDS | 35.0% | |
| GATTTCTTGAAGTCTTCGTA+AGG | + | chr3.4:96928713-96928732 | None:intergenic | 35.0% | |
| GGTAAAAGAAAGCTTTGCTT+TGG | - | chr3.4:96928670-96928689 | MS.gene064659:CDS | 35.0% | |
| GTTAGAGATGATAGAAGAGA+TGG | - | chr3.4:96928736-96928755 | MS.gene064659:CDS | 35.0% | |
| TAGAAACTCACTTCTTCTTG+AGG | + | chr3.4:96928327-96928346 | None:intergenic | 35.0% | |
| TCAAAGAGGAAAAGAAACGA+AGG | - | chr3.4:96928574-96928593 | MS.gene064659:CDS | 35.0% | |
| TGCTTTGGTGAAAAAGTCAA+AGG | - | chr3.4:96928685-96928704 | MS.gene064659:CDS | 35.0% | |
| TTCTTGCTTAGCAAGATTCT+CGG | - | chr3.4:96928385-96928404 | MS.gene064659:CDS | 35.0% | |
| TTTGGCAACAAATGTTCGTT+TGG | - | chr3.4:96928858-96928877 | MS.gene064659:CDS | 35.0% | |
| !!! | GCAACTATTGCAGTGTTTTT+TGG | - | chr3.4:96928784-96928803 | MS.gene064659:CDS | 35.0% |
| AATAACCTTTCCTCTTTCCC+CGG | - | chr3.4:96928140-96928159 | MS.gene064659:CDS | 40.0% | |
| ACTAGAAGAATGGACCTTCT+CGG | + | chr3.4:96928414-96928433 | None:intergenic | 40.0% | |
| AGAATGGAAGAGAATCGAAG+AGG | - | chr3.4:96928608-96928627 | MS.gene064659:CDS | 40.0% | |
| AGTAATTGTGCGAGCTTTCA+TGG | - | chr3.4:96928832-96928851 | MS.gene064659:CDS | 40.0% | |
| GAGCGACACATTTGAAAAGA+AGG | + | chr3.4:96928119-96928138 | None:intergenic | 40.0% | |
| GGTCCATTCTTCTAGTACTA+TGG | - | chr3.4:96928418-96928437 | MS.gene064659:CDS | 40.0% | |
| GGTTATGTCAAGTAGAATGG+AGG | - | chr3.4:96928595-96928614 | MS.gene064659:CDS | 40.0% | |
| TGAAGAATGTTGAGAGAGTG+AGG | - | chr3.4:96928531-96928550 | MS.gene064659:CDS | 40.0% | |
| ! | TCTTTGATGACACGTTGCAT+TGG | + | chr3.4:96928259-96928278 | None:intergenic | 40.0% |
| !! | TCATATGCTTTGGAGTTCAC+CGG | + | chr3.4:96928197-96928216 | None:intergenic | 40.0% |
| ACTTCTTCTTGAGGGAACGT+CGG | + | chr3.4:96928318-96928337 | None:intergenic | 45.0% | |
| ATAACCTTTCCTCTTTCCCC+GGG | - | chr3.4:96928141-96928160 | MS.gene064659:CDS | 45.0% | |
| CAATAGTTGCTCCAAGTCCT+TGG | + | chr3.4:96928774-96928793 | None:intergenic | 45.0% | |
| GAGAAAGACGGTATATGGCA+GGG | + | chr3.4:96928175-96928194 | None:intergenic | 45.0% | |
| GGGGAAAGAGGAAAGGTTAT+TGG | + | chr3.4:96928141-96928160 | None:intergenic | 45.0% | |
| GTCAAGTAGAATGGAGGAGA+AGG | - | chr3.4:96928649-96928668 | MS.gene064659:CDS | 45.0% | |
| TGCCATATACCGTCTTTCTC+CGG | - | chr3.4:96928175-96928194 | MS.gene064659:CDS | 45.0% | |
| TGCGAGCTTTCATGGAGATT+TGG | - | chr3.4:96928840-96928859 | MS.gene064659:CDS | 45.0% | |
| AAGATTCTCGGAAGCCGAGA+AGG | - | chr3.4:96928397-96928416 | MS.gene064659:CDS | 50.0% | |
| AGAAGAGATGGAGATGTCCG+AGG | - | chr3.4:96928748-96928767 | MS.gene064659:CDS | 50.0% | |
| CACCGGAGAAAGACGGTATA+TGG | + | chr3.4:96928180-96928199 | None:intergenic | 50.0% | |
| GGAGAAAGACGGTATATGGC+AGG | + | chr3.4:96928176-96928195 | None:intergenic | 50.0% | |
| TCGAAGAGGAACCGAAACGA+AGG | - | chr3.4:96928622-96928641 | MS.gene064659:CDS | 50.0% | |
| TGGAGTTCACCGGAGAAAGA+CGG | + | chr3.4:96928187-96928206 | None:intergenic | 50.0% | |
| ! | GACACGTTGCATTGGTGTTC+CGG | + | chr3.4:96928251-96928270 | None:intergenic | 50.0% |
| AAACCTTCCTGCTTCGTCGC+CGG | - | chr3.4:96928229-96928248 | MS.gene064659:CDS | 55.0% | |
| GATTCCCGGGGAAAGAGGAA+AGG | + | chr3.4:96928148-96928167 | None:intergenic | 55.0% | |
| TCTTCTTGAGGGAACGTCGG+AGG | + | chr3.4:96928315-96928334 | None:intergenic | 55.0% | |
| TTGCTCCAAGTCCTTGGCCT+CGG | + | chr3.4:96928768-96928787 | None:intergenic | 55.0% | |
| !!! | GAACGTCGGAGGTGCTTTTG+CGG | + | chr3.4:96928304-96928323 | None:intergenic | 55.0% |
| AGACGGTATATGGCAGGGCC+TGG | + | chr3.4:96928170-96928189 | None:intergenic | 60.0% | |
| GATGGAGATGTCCGAGGCCA+AGG | - | chr3.4:96928754-96928773 | MS.gene064659:CDS | 60.0% | |
| GATGTCCGAGGCCAAGGACT+TGG | - | chr3.4:96928760-96928779 | MS.gene064659:CDS | 60.0% | |
| GGCGACGAAGCAGGAAGGTT+TGG | + | chr3.4:96928230-96928249 | None:intergenic | 60.0% | |
| TATGGCAGGGCCTGGATTCC+CGG | + | chr3.4:96928162-96928181 | None:intergenic | 60.0% | |
| TCCTCTTTCCCCGGGAATCC+AGG | - | chr3.4:96928149-96928168 | MS.gene064659:CDS | 60.0% | |
| !!! | GGAGGTGCTTTTGCGGCCTT+TGG | + | chr3.4:96928297-96928316 | None:intergenic | 60.0% |
| ATGGCAGGGCCTGGATTCCC+GGG | + | chr3.4:96928161-96928180 | None:intergenic | 65.0% | |
| GCCTGGATTCCCGGGGAAAG+AGG | + | chr3.4:96928153-96928172 | None:intergenic | 65.0% | |
| GTTCCGGCGACGAAGCAGGA+AGG | + | chr3.4:96928235-96928254 | None:intergenic | 65.0% | |
| TGGTGTTCCGGCGACGAAGC+AGG | + | chr3.4:96928239-96928258 | None:intergenic | 65.0% | |
| TGGCAGGGCCTGGATTCCCG+GGG | + | chr3.4:96928160-96928179 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 96928083 | 96928940 | 96928083 | ID=MS.gene064659 |
| chr3.4 | mRNA | 96928083 | 96928940 | 96928083 | ID=MS.gene064659.t1;Parent=MS.gene064659 |
| chr3.4 | exon | 96928083 | 96928940 | 96928083 | ID=MS.gene064659.t1.exon1;Parent=MS.gene064659.t1 |
| chr3.4 | CDS | 96928083 | 96928940 | 96928083 | ID=cds.MS.gene064659.t1;Parent=MS.gene064659.t1 |
| Gene Sequence |
| Protein sequence |
