AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene064872

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064872.t1 MTR_3g116070 89.628 376 13 8 1 373 1 353 0.0 643
MS.gene064872.t1 MTR_2g078700 71.975 157 38 3 23 176 23 176 4.04e-76 240
MS.gene064872.t1 MTR_1g008740 64.242 165 56 2 17 180 7 169 3.34e-74 234
MS.gene064872.t1 MTR_1g008740 61.932 176 61 2 6 177 6 179 3.64e-74 234
MS.gene064872.t1 MTR_3g109340 61.765 170 61 2 11 180 10 175 1.96e-72 230
MS.gene064872.t1 MTR_3g109340 61.765 170 62 2 11 180 10 176 3.38e-72 229
MS.gene064872.t1 MTR_6g012670 49.804 255 109 8 1 254 1 237 1.38e-70 224
MS.gene064872.t1 MTR_6g084430 66.456 158 45 4 20 176 2 152 3.48e-70 223
MS.gene064872.t1 MTR_7g085260 51.101 227 94 7 23 237 17 238 1.27e-68 221
MS.gene064872.t1 MTR_4g108760 53.604 222 81 8 7 220 2 209 1.28e-68 220
MS.gene064872.t1 MTR_3g435150 63.743 171 51 5 8 176 6 167 2.28e-68 218
MS.gene064872.t1 MTR_6g032770 62.500 160 48 3 23 176 18 171 7.10e-67 216
MS.gene064872.t1 MTR_3g070030 61.905 168 56 5 12 175 7 170 2.58e-66 214
MS.gene064872.t1 MTR_7g011130 55.779 199 66 6 12 195 7 198 9.34e-66 213
MS.gene064872.t1 MTR_7g011120 51.376 218 88 6 23 229 8 218 2.05e-63 205
MS.gene064872.t1 MTR_2g064470 56.604 159 64 2 20 178 8 161 8.39e-63 203
MS.gene064872.t1 MTR_1g069805 53.939 165 70 2 23 187 10 168 2.42e-61 198
MS.gene064872.t1 MTR_7g097090 39.677 310 155 10 23 330 10 289 4.48e-60 196
MS.gene064872.t1 MTR_2g064090 57.051 156 62 3 23 176 6 158 1.42e-55 186
MS.gene064872.t1 MTR_7g100990 51.744 172 79 2 14 182 2 172 3.21e-55 184
MS.gene064872.t1 MTR_4g036030 54.487 156 62 4 23 175 7 156 3.71e-55 185
MS.gene064872.t1 MTR_6g477900 45.833 216 96 8 22 225 5 211 8.19e-55 181
MS.gene064872.t1 MTR_5g021710 55.346 159 62 4 20 175 5 157 9.22e-55 184
MS.gene064872.t1 MTR_4g101680 55.769 156 60 4 23 175 7 156 2.08e-54 183
MS.gene064872.t1 MTR_4g035590 50.000 188 79 5 22 206 7 182 2.64e-54 182
MS.gene064872.t1 MTR_2g062730 51.462 171 75 4 20 187 7 172 4.87e-54 182
MS.gene064872.t1 MTR_8g076110 54.717 159 63 4 20 175 3 155 6.40e-54 181
MS.gene064872.t1 MTR_2157s0010 53.659 164 66 4 23 177 8 170 2.77e-53 177
MS.gene064872.t1 MTR_5g012080 54.140 157 63 5 23 175 7 158 6.30e-53 179
MS.gene064872.t1 MTR_2g080010 47.826 184 84 3 11 183 2 184 1.25e-52 178
MS.gene064872.t1 MTR_8g024480 48.901 182 67 6 23 182 15 192 4.73e-52 179
MS.gene064872.t1 MTR_5g041940 51.282 156 70 3 23 175 3 155 5.57e-51 171
MS.gene064872.t1 MTR_8g094580 52.830 159 68 3 23 178 7 161 7.10e-51 172
MS.gene064872.t1 MTR_1g096430 51.220 164 61 5 20 175 4 156 1.08e-50 173
MS.gene064872.t1 MTR_4g089135 47.727 176 69 3 23 176 15 189 1.32e-50 173
MS.gene064872.t1 MTR_7g005280 49.714 175 79 5 16 188 8 175 1.57e-50 170
MS.gene064872.t1 MTR_3g088110 50.932 161 73 3 19 177 3 159 1.90e-50 171
MS.gene064872.t1 MTR_3g070040 53.750 160 63 5 27 181 12 165 2.84e-50 172
MS.gene064872.t1 MTR_7g085220 48.503 167 75 4 20 176 5 170 5.96e-50 171
MS.gene064872.t1 MTR_4g081870 52.564 156 68 4 23 175 9 161 1.84e-49 167
MS.gene064872.t1 MTR_3g096920 50.920 163 74 3 18 178 2 160 2.93e-49 168
MS.gene064872.t1 MTR_2g093810 48.503 167 82 2 18 181 9 174 3.12e-49 169
MS.gene064872.t1 MTR_3g064580 53.846 156 67 4 23 176 6 158 3.32e-49 176
MS.gene064872.t1 MTR_8g467490 40.323 248 112 7 17 251 8 232 1.16e-48 169
MS.gene064872.t1 MTR_2g079990 47.929 169 84 3 8 176 1 165 1.67e-48 167
MS.gene064872.t1 MTR_5g040420 49.711 173 78 4 11 176 3 173 4.88e-48 167
MS.gene064872.t1 MTR_5g076850 42.616 237 112 10 23 253 6 224 1.74e-47 171
MS.gene064872.t1 MTR_8g059170 49.091 165 74 4 23 183 14 172 1.96e-47 164
MS.gene064872.t1 MTR_6g011860 46.893 177 80 4 23 191 15 185 2.70e-47 165
MS.gene064872.t1 MTR_4g134460 50.327 153 71 3 25 177 56 203 1.30e-45 162
MS.gene064872.t1 MTR_5g014300 50.602 166 69 6 23 181 6 165 5.56e-45 158
MS.gene064872.t1 MTR_3g096920 42.000 200 73 4 18 178 2 197 1.58e-44 156
MS.gene064872.t1 MTR_2g079990 41.327 196 85 3 8 176 1 193 3.48e-44 157
MS.gene064872.t1 MTR_4g098630 48.235 170 82 5 23 188 6 173 5.87e-44 154
MS.gene064872.t1 MTR_0036s0150 49.045 157 70 5 25 177 7 157 9.64e-44 159
MS.gene064872.t1 MTR_8g063550 39.091 220 116 7 23 231 6 218 3.92e-43 153
MS.gene064872.t1 MTR_1g090723 47.097 155 77 3 25 177 10 161 4.07e-43 159
MS.gene064872.t1 MTR_8g063550 39.091 220 116 7 23 231 6 218 6.33e-43 155
MS.gene064872.t1 MTR_1g090723 46.452 155 77 3 25 177 10 160 1.05e-42 157
MS.gene064872.t1 MTR_1g090723 46.452 155 77 3 25 177 10 160 1.07e-42 157
MS.gene064872.t1 MTR_4g075980 43.258 178 82 6 2 176 1 162 1.21e-42 150
MS.gene064872.t1 MTR_8g063550 39.091 220 116 7 23 231 6 218 1.65e-42 154
MS.gene064872.t1 MTR_5g090970 44.379 169 84 4 16 175 11 178 1.75e-42 150
MS.gene064872.t1 MTR_5g069030 49.367 158 74 4 23 178 25 178 1.88e-42 157
MS.gene064872.t1 MTR_3g093050 41.667 204 109 6 23 220 22 221 2.54e-42 156
MS.gene064872.t1 MTR_3g093040 41.463 205 111 5 23 225 108 305 3.06e-42 150
MS.gene064872.t1 MTR_3g093050 41.667 204 109 6 23 220 22 221 3.83e-42 155
MS.gene064872.t1 MTR_1g097300 51.282 156 68 6 25 177 21 171 6.11e-42 154
MS.gene064872.t1 MTR_3g096140 45.161 155 79 4 25 177 9 159 8.19e-42 148
MS.gene064872.t1 MTR_3g096140 45.161 155 79 4 25 177 9 159 2.43e-41 149
MS.gene064872.t1 MTR_8g093580 44.586 157 81 4 23 177 6 158 5.23e-41 150
MS.gene064872.t1 MTR_5g090970 44.379 169 83 5 16 175 11 177 1.17e-40 145
MS.gene064872.t1 MTR_2g068880 41.477 176 89 4 25 187 24 198 4.80e-40 144
MS.gene064872.t1 MTR_1g090720 48.750 160 72 4 23 175 42 198 3.76e-39 145
MS.gene064872.t1 MTR_2g068920 40.341 176 91 4 25 187 23 197 6.05e-39 140
MS.gene064872.t1 MTR_4g052620 43.114 167 88 3 20 180 2 167 4.17e-37 135
MS.gene064872.t1 MTR_8g099750 41.212 165 87 4 23 183 14 172 1.95e-36 132
MS.gene064872.t1 MTR_2g086880 45.399 163 71 6 25 186 20 165 2.09e-36 139
MS.gene064872.t1 MTR_2g086880 45.399 163 71 6 25 186 20 165 2.23e-36 139
MS.gene064872.t1 MTR_8g023840 36.842 228 129 6 23 242 11 231 3.36e-35 133
MS.gene064872.t1 MTR_2g086690 43.558 163 80 5 24 177 5 164 1.47e-34 128
MS.gene064872.t1 MTR_8g094580 54.545 110 44 2 72 178 1 107 5.06e-34 126
MS.gene064872.t1 MTR_3g098810 43.293 164 75 5 23 175 14 170 1.17e-33 125
MS.gene064872.t1 MTR_8g023860 40.571 175 95 4 23 195 12 179 2.67e-33 128
MS.gene064872.t1 MTR_3g096140 41.844 141 76 4 39 177 2 138 5.80e-32 123
MS.gene064872.t1 MTR_8g023900 35.071 211 118 6 23 227 12 209 6.75e-32 125
MS.gene064872.t1 MTR_8g023900 36.000 175 98 5 8 175 173 340 1.30e-27 113
MS.gene064872.t1 MTR_3g098810 45.324 139 71 3 17 153 8 143 6.61e-31 116
MS.gene064872.t1 MTR_8g023880 35.829 187 93 6 23 193 7 182 3.87e-29 114
MS.gene064872.t1 MTR_8g023930 40.385 156 84 4 23 176 24 172 7.00e-29 117
MS.gene064872.t1 MTR_7g105170 39.264 163 89 6 23 176 4 165 7.18e-29 113
MS.gene064872.t1 MTR_4g094302 36.364 165 91 3 23 182 11 166 1.52e-26 105
MS.gene064872.t1 MTR_7g070140 51.220 82 40 0 77 158 17 98 2.02e-25 100
MS.gene064872.t1 MTR_4g094302 41.085 129 67 2 23 151 11 130 3.20e-24 97.8
MS.gene064872.t1 MTR_8g093790 40.000 160 70 8 23 182 10 143 1.24e-20 89.0
MS.gene064872.t1 MTR_3g096400 31.875 160 93 3 23 173 7 159 1.44e-17 80.9
MS.gene064872.t1 MTR_7g083360 34.848 132 79 5 20 149 7 133 7.36e-17 77.4
MS.gene064872.t1 MTR_7g070150 56.140 57 21 1 119 175 5 57 5.24e-16 73.2
MS.gene064872.t1 MTR_7g083330 31.544 149 92 6 3 149 1 141 2.31e-15 74.3
MS.gene064872.t1 MTR_7g083370 31.690 142 86 5 20 157 7 141 3.12e-15 72.4
MS.gene064872.t1 MTR_4g078875 32.886 149 79 6 22 153 47 191 6.74e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064872.t1 AT1G76420 74.725 182 40 4 1 181 1 177 5.00e-95 287
MS.gene064872.t1 AT2G24430 64.881 168 54 3 11 176 2 166 4.22e-76 238
MS.gene064872.t1 AT2G24430 64.881 168 54 3 11 176 2 166 4.22e-76 238
MS.gene064872.t1 AT5G61430 57.826 230 74 10 7 221 2 223 1.77e-75 237
MS.gene064872.t1 AT3G15170 54.545 209 87 4 18 221 15 220 2.65e-73 231
MS.gene064872.t1 AT3G18400 68.790 157 44 3 20 176 2 153 9.39e-73 229
MS.gene064872.t1 AT5G53950 67.702 161 46 3 19 176 13 170 2.31e-72 230
MS.gene064872.t1 AT5G07680 60.101 198 65 8 15 204 8 199 3.10e-71 226
MS.gene064872.t1 AT5G39610 68.153 157 46 3 23 178 20 173 3.27e-71 224
MS.gene064872.t1 AT5G07680 61.376 189 60 7 23 204 3 185 1.69e-70 223
MS.gene064872.t1 AT5G18270 49.225 258 95 10 1 248 1 232 5.27e-70 223
MS.gene064872.t1 AT5G18270 49.225 258 95 10 1 248 1 232 7.20e-70 223
MS.gene064872.t1 AT3G29035 63.529 170 55 4 6 174 10 173 3.53e-68 218
MS.gene064872.t1 AT3G04060 64.331 157 49 4 23 176 20 172 1.59e-67 216
MS.gene064872.t1 AT1G56010 45.714 245 115 8 20 259 16 247 2.04e-64 208
MS.gene064872.t1 AT3G12977 54.487 156 68 2 20 175 15 167 2.50e-60 196
MS.gene064872.t1 AT4G28530 51.786 168 61 2 23 175 10 172 4.43e-57 190
MS.gene064872.t1 AT5G62380 55.414 157 59 5 23 175 7 156 6.64e-56 187
MS.gene064872.t1 AT5G62380 55.414 157 59 5 23 175 7 156 6.64e-56 187
MS.gene064872.t1 AT1G33280 44.395 223 104 8 22 239 7 214 2.06e-55 184
MS.gene064872.t1 AT4G36160 56.024 166 61 6 23 182 10 169 3.51e-55 186
MS.gene064872.t1 AT4G36160 56.024 166 61 6 23 182 10 169 3.51e-55 186
MS.gene064872.t1 AT4G36160 56.024 166 61 6 23 182 14 173 3.60e-55 186
MS.gene064872.t1 AT2G46770 52.381 168 62 4 23 175 16 180 9.48e-55 184
MS.gene064872.t1 AT2G18060 53.333 165 66 5 23 182 9 167 1.09e-54 184
MS.gene064872.t1 AT2G18060 53.333 165 66 5 23 182 9 167 1.09e-54 184
MS.gene064872.t1 AT1G12260 55.414 157 59 5 23 175 7 156 2.30e-54 182
MS.gene064872.t1 AT1G12260 55.414 157 59 5 23 175 7 156 3.44e-54 184
MS.gene064872.t1 AT4G10350 56.051 157 62 4 22 175 8 160 4.57e-54 182
MS.gene064872.t1 AT1G62700 55.128 156 61 4 23 175 7 156 1.62e-53 182
MS.gene064872.t1 AT1G62700 55.128 156 61 4 23 175 7 156 1.62e-53 182
MS.gene064872.t1 AT1G69490 50.595 168 77 3 16 180 2 166 2.32e-53 177
MS.gene064872.t1 AT1G61110 49.143 175 76 4 23 186 16 188 3.25e-53 179
MS.gene064872.t1 AT4G27410 52.096 167 73 5 23 187 14 175 4.33e-53 178
MS.gene064872.t1 AT1G71930 51.829 164 60 5 20 175 6 158 7.03e-53 178
MS.gene064872.t1 AT1G71930 51.829 164 60 5 20 175 6 158 7.03e-53 178
MS.gene064872.t1 AT5G66300 55.063 158 61 5 22 175 11 162 1.16e-52 177
MS.gene064872.t1 AT3G17730 54.430 158 66 5 22 177 5 158 1.96e-52 174
MS.gene064872.t1 AT5G08790 53.049 164 69 3 18 177 2 161 2.45e-52 176
MS.gene064872.t1 AT3G61910 47.727 176 74 5 23 183 11 183 4.04e-52 176
MS.gene064872.t1 AT5G63790 53.659 164 68 3 18 177 45 204 6.92e-52 175
MS.gene064872.t1 AT5G63790 53.659 164 68 3 18 177 55 214 8.02e-52 175
MS.gene064872.t1 AT1G79580 53.704 162 64 5 23 180 17 171 1.49e-51 176
MS.gene064872.t1 AT1G79580 53.704 162 64 5 23 180 17 171 1.49e-51 176
MS.gene064872.t1 AT1G79580 53.704 162 64 5 23 180 17 171 1.49e-51 176
MS.gene064872.t1 AT1G79580 53.704 162 64 5 23 180 17 171 1.49e-51 176
MS.gene064872.t1 AT1G79580 53.704 162 64 5 23 180 17 171 1.49e-51 176
MS.gene064872.t1 AT5G39820 45.178 197 82 6 1 176 1 192 2.41e-51 174
MS.gene064872.t1 AT1G32770 49.412 170 71 4 23 180 16 182 3.67e-51 175
MS.gene064872.t1 AT1G01720 44.286 210 101 7 23 224 7 208 6.57e-51 172
MS.gene064872.t1 AT5G61430 58.788 165 48 8 72 221 1 160 7.03e-51 171
MS.gene064872.t1 AT3G03200 55.769 156 64 4 22 175 5 157 8.06e-51 177
MS.gene064872.t1 AT1G77450 50.299 167 75 4 23 185 10 172 2.39e-50 169
MS.gene064872.t1 AT3G04070 48.824 170 75 4 17 176 4 171 2.59e-50 172
MS.gene064872.t1 AT5G17260 54.839 155 65 4 23 175 6 157 3.59e-50 175
MS.gene064872.t1 AT5G46590 50.909 165 77 3 23 185 6 168 2.43e-49 168
MS.gene064872.t1 AT5G04410 53.503 157 67 4 23 177 9 161 4.10e-49 174
MS.gene064872.t1 AT1G65910 52.866 157 68 4 23 177 6 158 6.02e-49 174
MS.gene064872.t1 AT4G27410 47.283 184 73 6 23 187 14 192 1.44e-48 167
MS.gene064872.t1 AT3G15500 52.564 156 64 4 23 175 14 162 3.20e-48 166
MS.gene064872.t1 AT3G10480 44.928 207 100 6 23 220 27 228 3.77e-48 169
MS.gene064872.t1 AT2G43000 46.784 171 87 3 14 184 10 176 5.00e-48 164
MS.gene064872.t1 AT3G10500 51.592 157 70 4 23 177 9 161 7.51e-48 170
MS.gene064872.t1 AT2G02450 52.941 153 67 4 25 177 53 200 8.13e-48 166
MS.gene064872.t1 AT1G54330 56.774 155 58 6 23 175 6 153 9.21e-48 164
MS.gene064872.t1 AT3G04070 44.624 186 75 4 17 176 4 187 9.30e-48 166
MS.gene064872.t1 AT2G02450 52.941 153 67 4 25 177 53 200 9.36e-48 167
MS.gene064872.t1 AT1G52890 52.564 156 64 4 23 175 14 162 1.06e-47 164
MS.gene064872.t1 AT1G26870 47.368 171 81 2 14 176 7 176 1.14e-47 167
MS.gene064872.t1 AT3G15510 41.284 218 108 4 27 233 21 229 2.12e-47 165
MS.gene064872.t1 AT3G10490 50.318 157 71 4 23 176 27 179 3.97e-47 160
MS.gene064872.t1 AT3G10480 44.928 207 99 7 23 220 27 227 8.87e-47 165
MS.gene064872.t1 AT4G35580 47.590 166 79 5 21 183 7 167 6.51e-46 164
MS.gene064872.t1 AT3G10490 50.318 157 71 4 23 176 27 179 7.56e-46 163
MS.gene064872.t1 AT4G35580 47.590 166 79 5 21 183 7 167 9.04e-46 164
MS.gene064872.t1 AT4G35580 47.590 166 79 5 21 183 7 167 1.03e-45 164
MS.gene064872.t1 AT5G46590 54.110 146 63 3 23 166 6 149 1.10e-45 158
MS.gene064872.t1 AT5G13180 52.288 153 67 3 23 175 14 160 2.51e-45 156
MS.gene064872.t1 AT1G33060 50.318 157 72 4 21 175 22 174 5.64e-45 164
MS.gene064872.t1 AT1G33060 50.318 157 72 4 21 175 22 174 5.86e-45 164
MS.gene064872.t1 AT4G17980 50.000 160 68 5 23 175 6 160 2.53e-43 151
MS.gene064872.t1 AT4G17980 50.000 160 68 5 23 175 6 160 3.30e-43 152
MS.gene064872.t1 AT2G17040 46.104 154 73 4 25 176 8 153 4.72e-43 151
MS.gene064872.t1 AT3G10480 36.042 283 128 8 23 261 27 300 7.06e-43 156
MS.gene064872.t1 AT5G24590 46.061 165 82 5 14 175 4 164 9.34e-43 155
MS.gene064872.t1 AT1G56010 45.078 193 88 8 72 259 1 180 1.21e-42 149
MS.gene064872.t1 AT3G49530 43.011 186 95 6 23 201 13 194 2.30e-42 153
MS.gene064872.t1 AT3G49530 48.077 156 74 5 23 175 13 164 7.53e-42 152
MS.gene064872.t1 AT1G34190 50.000 158 67 6 25 177 18 168 8.18e-42 154
MS.gene064872.t1 AT1G34180 48.387 155 74 5 25 177 18 168 1.10e-41 152
MS.gene064872.t1 AT1G52880 49.057 159 71 4 27 176 21 178 2.59e-41 148
MS.gene064872.t1 AT2G33480 48.750 160 73 4 23 182 15 165 5.69e-41 145
MS.gene064872.t1 AT1G34180 48.387 155 74 5 25 177 18 168 7.69e-41 151
MS.gene064872.t1 AT3G12910 43.575 179 86 6 16 180 13 190 1.53e-40 145
MS.gene064872.t1 AT2G33480 48.125 160 76 4 23 182 15 167 1.60e-40 144
MS.gene064872.t1 AT2G27300 43.478 184 83 8 22 196 13 184 4.79e-40 145
MS.gene064872.t1 AT1G32870 50.314 159 71 6 22 177 9 162 7.03e-40 148
MS.gene064872.t1 AT1G32870 50.314 159 71 6 22 177 9 162 7.81e-40 148
MS.gene064872.t1 AT1G34180 44.910 167 74 5 25 177 18 180 9.39e-40 147
MS.gene064872.t1 AT1G32870 50.314 159 71 6 22 177 45 198 1.29e-39 148
MS.gene064872.t1 AT5G09330 44.586 157 81 5 23 177 6 158 2.90e-39 146
MS.gene064872.t1 AT5G09330 44.586 157 81 5 23 177 6 158 2.90e-39 146
MS.gene064872.t1 AT5G09330 44.586 157 81 5 23 177 6 158 2.90e-39 146
MS.gene064872.t1 AT5G09330 44.586 157 81 5 23 177 6 158 2.90e-39 146
MS.gene064872.t1 AT5G09330 44.586 157 81 5 23 177 6 158 2.90e-39 146
MS.gene064872.t1 AT1G32510 46.584 161 78 3 23 176 6 165 3.57e-39 141
MS.gene064872.t1 AT1G34180 44.910 167 74 5 25 177 18 180 3.94e-39 147
MS.gene064872.t1 AT3G12977 56.075 107 45 1 69 175 10 114 5.01e-39 139
MS.gene064872.t1 AT5G64060 41.401 157 86 4 23 177 6 158 8.71e-37 137
MS.gene064872.t1 AT4G28530 49.219 128 50 1 23 135 10 137 2.09e-35 132
MS.gene064872.t1 AT4G10350 56.364 110 42 3 69 175 7 113 5.32e-34 127
MS.gene064872.t1 AT5G22290 42.553 141 77 3 25 164 23 160 7.56e-33 125
MS.gene064872.t1 AT3G44290 41.104 163 81 6 25 185 16 165 8.70e-32 120
MS.gene064872.t1 AT3G44290 41.104 163 81 6 25 185 16 165 1.95e-31 122
MS.gene064872.t1 AT5G04395 42.466 146 69 3 20 151 25 169 2.55e-31 117
MS.gene064872.t1 AT3G44350 39.634 164 90 3 23 180 5 165 6.05e-30 115
MS.gene064872.t1 AT4G01550 35.025 197 100 7 26 213 7 184 5.34e-29 117
MS.gene064872.t1 AT4G01520 34.161 161 88 5 24 176 5 155 1.00e-26 108
MS.gene064872.t1 AT2G33480 49.057 106 51 2 77 182 8 110 1.91e-26 105
MS.gene064872.t1 AT5G22380 37.267 161 94 4 26 180 8 167 2.07e-26 105
MS.gene064872.t1 AT3G44350 41.791 134 69 3 23 150 5 135 2.44e-25 100
MS.gene064872.t1 AT4G01540 33.962 159 87 5 26 176 7 155 2.79e-25 106
MS.gene064872.t1 AT4G01540 33.962 159 87 5 26 176 7 155 3.11e-25 105
MS.gene064872.t1 AT4G01540 33.962 159 87 5 26 176 7 155 4.12e-25 106
MS.gene064872.t1 AT4G01540 33.962 159 87 5 26 176 7 155 4.16e-25 105
MS.gene064872.t1 AT3G04420 36.774 155 87 5 24 175 4 150 1.11e-23 99.8
MS.gene064872.t1 AT3G04420 36.774 155 87 5 24 175 4 150 2.22e-23 100
MS.gene064872.t1 AT5G64530 35.542 166 81 4 23 175 3 155 5.67e-23 95.1
MS.gene064872.t1 AT2G18060 54.217 83 31 3 102 182 2 79 9.12e-23 97.1
MS.gene064872.t1 AT2G43000 46.000 100 52 1 85 184 1 98 1.08e-22 94.7
MS.gene064872.t1 AT1G02230 39.474 152 79 7 24 167 4 150 1.55e-22 97.8
MS.gene064872.t1 AT3G10490 55.000 80 34 1 97 176 2 79 1.57e-22 97.8
MS.gene064872.t1 AT3G10490 55.000 80 34 1 97 176 2 79 1.57e-22 97.8
MS.gene064872.t1 AT1G02250 35.404 161 91 7 24 180 4 155 3.84e-22 96.7
MS.gene064872.t1 AT5G64530 38.760 129 66 3 23 151 3 118 7.78e-22 91.3
MS.gene064872.t1 AT1G01010 31.120 241 124 11 26 254 6 216 6.83e-21 94.0
MS.gene064872.t1 AT1G02220 35.862 145 84 5 24 164 4 143 4.97e-18 85.1
MS.gene064872.t1 AT5G50820 36.806 144 58 8 23 153 17 140 6.42e-15 73.2
MS.gene064872.t1 AT5G22290 48.387 62 30 1 103 164 2 61 2.28e-14 72.4
MS.gene064872.t1 AT5G14000 30.189 159 100 6 23 179 15 164 4.35e-14 70.9
MS.gene064872.t1 AT3G55210 29.697 165 94 6 23 173 11 167 7.51e-14 71.6
MS.gene064872.t1 AT3G56530 29.221 154 102 4 22 173 51 199 1.07e-13 71.6
MS.gene064872.t1 AT5G14000 32.824 131 81 4 23 151 15 140 3.45e-13 67.4
MS.gene064872.t1 AT3G04430 31.915 141 79 5 29 158 6 140 2.17e-12 65.9
MS.gene064872.t1 AT1G28470 30.588 170 93 7 23 176 77 237 8.27e-11 63.2

Find 91 sgRNAs with CRISPR-Local

Find 148 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCTAAATGTCCTTGAATT+TGG 0.113855 3.3:+94660398 None:intergenic
TGGATTATTATTGTTGTTTC+TGG 0.174409 3.3:+94660207 None:intergenic
CTGCTACAAATGCTGAATTT+AGG 0.233006 3.3:-94659934 MS.gene064872:CDS
TATTGTCAATAATCCATCTT+AGG 0.255982 3.3:+94660053 None:intergenic
CTGCAGTAGTAGATCCCTTT+TGG 0.256195 3.3:-94661085 MS.gene064872:CDS
GTGAGAGTAATTGGTCATTT+TGG 0.260408 3.3:+94660293 None:intergenic
CTCCATCTCCACAGGGAATA+AGG 0.266636 3.3:+94660003 None:intergenic
AAGGTCTACCACCTGGTTTC+AGG 0.277471 3.3:-94661730 MS.gene064872:CDS
TGGAATGGTCTGCTGCTTCA+TGG 0.293699 3.3:+94660147 None:intergenic
TGCAGGATATTTCATAAATC+AGG 0.304192 3.3:-94660442 MS.gene064872:CDS
TATGAGAATGTGAGAGTAAT+TGG 0.314718 3.3:+94660284 None:intergenic
CTCCAAATTCAAGGACATTT+AGG 0.315142 3.3:-94660400 MS.gene064872:CDS
AACCTTAGAAGCCAAATAAA+AGG 0.317144 3.3:+94661679 None:intergenic
GAGCAACAAGTGCTGGTTAC+TGG 0.324307 3.3:-94661140 MS.gene064872:CDS
TGCTACAAATGCTGAATTTA+GGG 0.334843 3.3:-94659933 MS.gene064872:CDS
GAGTGTAGAGTCTACCTTGC+AGG 0.354307 3.3:+94660948 None:intergenic
ATTAAATTTGACAGGAAGAG+TGG 0.367388 3.3:-94660471 MS.gene064872:intron
GTCCTATGGGAATAGATTCT+TGG 0.388808 3.3:-94659871 MS.gene064872:CDS
GCTGGTTACTGGAAAGCAAC+TGG 0.394693 3.3:-94661129 MS.gene064872:CDS
TGTGAGCCATGGGAACTTCC+AGG 0.411730 3.3:-94661602 MS.gene064872:intron
CTCGTGGTGAAAAGACCAAA+TGG 0.412457 3.3:-94661023 MS.gene064872:CDS
ATTGTGATTGTGATTGTGAT+TGG 0.418800 3.3:+94660095 None:intergenic
CATGATCTGATTGCATTCTC+AGG 0.420966 3.3:-94659959 MS.gene064872:CDS
AGTTTAGACTTTAGACAAGT+TGG 0.421459 3.3:+94659840 None:intergenic
AGAGACAGAAAATACCCAAC+TGG 0.435287 3.3:-94661177 MS.gene064872:CDS
AGTAGAGGAGGAGGAGTAGA+TGG 0.441149 3.3:-94659893 MS.gene064872:CDS
CTCCTTATTCCCTGTGGAGA+TGG 0.444680 3.3:-94660005 MS.gene064872:CDS
CTGTTTGTTCTAAGCCCAGT+TGG 0.444880 3.3:+94661162 None:intergenic
ATGATGCTCTTAACCTAAGA+TGG 0.450839 3.3:-94660066 MS.gene064872:CDS
GTTTAGACTTTAGACAAGTT+GGG 0.454126 3.3:+94659841 None:intergenic
GTGCGCAGAAATGGCAAAGA+TGG 0.456021 3.3:-94661229 MS.gene064872:intron
TTGAAGAGTAGTTCTGAAGA+TGG 0.457504 3.3:+94660187 None:intergenic
GTACTCATGCATGACCCATT+TGG 0.462977 3.3:+94661008 None:intergenic
AGGAGGAGTAGATGGTCCTA+TGG 0.463355 3.3:-94659885 MS.gene064872:CDS
TGATCATTGAAAAGGAAGGT+TGG 0.466892 3.3:+94660239 None:intergenic
AGGAAGAGTGGGTGATATGC+AGG 0.467215 3.3:-94660459 MS.gene064872:CDS
TGTTTGTTCTAAGCCCAGTT+GGG 0.468704 3.3:+94661163 None:intergenic
GAAAAGGAAGGTTGGAATGA+AGG 0.469309 3.3:+94660247 None:intergenic
ATCTCCATCTCCATCTCCAC+AGG 0.470024 3.3:+94659995 None:intergenic
GGGTCTTCTTCATCCCCAAA+AGG 0.475040 3.3:+94661070 None:intergenic
CCCTTCCTTTGTAGAAAACA+AGG 0.478110 3.3:+94661049 None:intergenic
GTTGCAAGTAAAGGTGGTGT+AGG 0.481910 3.3:+94660337 None:intergenic
AATTCACTACTCCAAATTCA+AGG 0.492982 3.3:-94660409 MS.gene064872:CDS
AAAAGTGATGAGAGTGTAAA+CGG 0.494516 3.3:+94660986 None:intergenic
AAGGTTGGAATGAAGGCAAT+GGG 0.499808 3.3:+94660254 None:intergenic
TAATGAGTTCTTCATCAGTT+GGG 0.509577 3.3:+94661702 None:intergenic
GTAATGAGTTCTTCATCAGT+TGG 0.518253 3.3:+94661701 None:intergenic
GCAGGATATTTCATAAATCA+GGG 0.520833 3.3:-94660441 MS.gene064872:CDS
AATGAATTAGTTGCAAGTAA+AGG 0.523374 3.3:+94660328 None:intergenic
ATTATTAACAGTAGAGGAGG+AGG 0.529799 3.3:-94659902 MS.gene064872:CDS
ACAAACAGAGCAACAAGTGC+TGG 0.530692 3.3:-94661147 MS.gene064872:CDS
ATTATTATTGTTGTTTCTGG+TGG 0.531495 3.3:+94660210 None:intergenic
GCAAGTAAAGGTGGTGTAGG+AGG 0.532204 3.3:+94660340 None:intergenic
GGTCTTCTTCATCCCCAAAA+GGG 0.552052 3.3:+94661071 None:intergenic
TTAAATTTGACAGGAAGAGT+GGG 0.555158 3.3:-94660470 MS.gene064872:intron
CCCATGGCTCACATCTATTG+AGG 0.558723 3.3:+94661612 None:intergenic
ACCTCAATAGATGTGAGCCA+TGG 0.559776 3.3:-94661613 MS.gene064872:CDS
TCGTGGTGAAAAGACCAAAT+GGG 0.562515 3.3:-94661022 MS.gene064872:CDS
CTTTAGACAAGTTGGGCATG+TGG 0.562750 3.3:+94659848 None:intergenic
TCCCAGTATGATGTTAGCAA+TGG 0.563508 3.3:-94661798 None:intergenic
GGTGTGATTGATCATTGAAA+AGG 0.567351 3.3:+94660231 None:intergenic
CTGGTTACTGGAAAGCAACT+GGG 0.568979 3.3:-94661128 MS.gene064872:CDS
GAAGGTTGGAATGAAGGCAA+TGG 0.573071 3.3:+94660253 None:intergenic
TGCGCAGAAATGGCAAAGAT+GGG 0.576663 3.3:-94661228 MS.gene064872:intron
GAATTAGTTGCAAGTAAAGG+TGG 0.579741 3.3:+94660331 None:intergenic
CAAAGATGGGAGAAAGAGAG+TGG 0.580922 3.3:-94661215 MS.gene064872:CDS
GGAGGAGTAGATGGTCCTAT+GGG 0.586562 3.3:-94659884 MS.gene064872:CDS
TCCTTCTCATACCACCTGCA+AGG 0.587913 3.3:-94660962 MS.gene064872:intron
ACCTTGCAGGTGGTATGAGA+AGG 0.591967 3.3:+94660961 None:intergenic
AAAATACCTGGAAGTTCCCA+TGG 0.594367 3.3:+94661596 None:intergenic
TGTGGAGATGGAGATGGAGA+TGG 0.601306 3.3:-94659993 MS.gene064872:CDS
ACAATTATTAACAGTAGAGG+AGG 0.602665 3.3:-94659905 MS.gene064872:CDS
CCTCAATAGATGTGAGCCAT+GGG 0.602795 3.3:-94661612 MS.gene064872:CDS
ATTCCCTGTGGAGATGGAGA+TGG 0.605578 3.3:-94659999 MS.gene064872:CDS
CAAATTCAAGGACATTTAGG+TGG 0.614283 3.3:-94660397 MS.gene064872:CDS
ATGACAATTATTAACAGTAG+AGG 0.624652 3.3:-94659908 MS.gene064872:CDS
TGAAAACTCCTTATTCCCTG+TGG 0.636642 3.3:-94660011 MS.gene064872:CDS
GAAAGCAACTGGGAAGGACA+AGG 0.641859 3.3:-94661118 MS.gene064872:CDS
GTTGGGTGAAACCTGAAACC+AGG 0.645484 3.3:+94661719 None:intergenic
AACGAACAAGGTCTACCACC+TGG 0.649637 3.3:-94661737 MS.gene064872:CDS
GAGACAGAAAATACCCAACT+GGG 0.657078 3.3:-94661176 MS.gene064872:CDS
GGCCAAGAATCTATTCCCAT+AGG 0.657180 3.3:+94659869 None:intergenic
CAGGATATTTCATAAATCAG+GGG 0.657923 3.3:-94660440 MS.gene064872:CDS
CCTTCCTTTGTAGAAAACAA+GGG 0.658759 3.3:+94661050 None:intergenic
TGATTGATCATTGAAAAGGA+AGG 0.667339 3.3:+94660235 None:intergenic
TCTCCATCTCCATCTCCACA+GGG 0.678879 3.3:+94659996 None:intergenic
TTACTGGAAAGCAACTGGGA+AGG 0.681913 3.3:-94661124 MS.gene064872:CDS
TGTAGAGTCTACCTTGCAGG+TGG 0.682650 3.3:+94660951 None:intergenic
TACAAAGGAAGGGCCCCTCG+TGG 0.684378 3.3:-94661039 MS.gene064872:CDS
GAGATGGAGATGGAGATGGA+TGG 0.687367 3.3:-94659989 MS.gene064872:CDS
GGGTGAAACCTGAAACCAGG+TGG 0.745805 3.3:+94661722 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTATTAATTAAATAGAAAAA+TGG + chr3.3:94660938-94660957 None:intergenic 10.0%
!!! ATTTTATACATGAAATTATA+AGG - chr3.3:94661129-94661148 MS.gene064872:CDS 10.0%
!! AACAAAGTATATTTATTCAT+TGG + chr3.3:94661086-94661105 None:intergenic 15.0%
!! AATGAATAAATATACTTTGT+TGG - chr3.3:94661085-94661104 MS.gene064872:CDS 15.0%
!! ACAAAGTATATTTATTCATT+GGG + chr3.3:94661085-94661104 None:intergenic 15.0%
!! ATAACAAAATATTAATACCT+AGG + chr3.3:94660321-94660340 None:intergenic 15.0%
!! TTTAGAAAATTAAATTTGAC+AGG - chr3.3:94661162-94661181 MS.gene064872:CDS 15.0%
!!! TTCAATTTTTGTCTATTTTT+GGG - chr3.3:94660767-94660786 MS.gene064872:intron 15.0%
!! AAAATAGACAAAAATTGAAG+AGG + chr3.3:94660766-94660785 None:intergenic 20.0%
!! AGTAAAAAAAGAAATGACTT+GGG + chr3.3:94660818-94660837 None:intergenic 20.0%
!! CATAAATTCATTATCCATTT+GGG - chr3.3:94660866-94660885 MS.gene064872:intron 20.0%
!! TCATAAATTCATTATCCATT+TGG - chr3.3:94660865-94660884 MS.gene064872:intron 20.0%
!!! CTTCAATTTTTGTCTATTTT+TGG - chr3.3:94660766-94660785 MS.gene064872:intron 20.0%
!!! GTTACTAGATTTAAAATGAA+TGG - chr3.3:94660281-94660300 MS.gene064872:CDS 20.0%
!!! TATCTTTTAAGTTCTTATCT+TGG - chr3.3:94661033-94661052 MS.gene064872:CDS 20.0%
! AATGAATTAGTTGCAAGTAA+AGG + chr3.3:94661316-94661335 None:intergenic 25.0%
! ATCTAGTAACTAGATATGAT+AGG + chr3.3:94660271-94660290 None:intergenic 25.0%
! ATGACAATTATTAACAGTAG+AGG - chr3.3:94661733-94661752 MS.gene064872:CDS 25.0%
! ATTTATGCAATAAAGAGAAG+TGG + chr3.3:94660372-94660391 None:intergenic 25.0%
! GAGTAAAAAAAGAAATGACT+TGG + chr3.3:94660819-94660838 None:intergenic 25.0%
! GTAAAAAAAGAAATGACTTG+GGG + chr3.3:94660817-94660836 None:intergenic 25.0%
! TAAATGTTGAATTGAACGAA+TGG - chr3.3:94660387-94660406 MS.gene064872:CDS 25.0%
! TATTGTCAATAATCCATCTT+AGG + chr3.3:94661591-94661610 None:intergenic 25.0%
!! ACTAGATTTAAAATGAATGG+TGG - chr3.3:94660284-94660303 MS.gene064872:CDS 25.0%
!! AGAACTCATTACCTTTTATT+TGG - chr3.3:94659951-94659970 MS.gene064872:CDS 25.0%
!! ATGTCTTATTATTAGGTTCA+AGG + chr3.3:94660242-94660261 None:intergenic 25.0%
!! GCACAATATGTCTTATTATT+AGG + chr3.3:94660249-94660268 None:intergenic 25.0%
!! TGTCTTATTATTAGGTTCAA+GGG + chr3.3:94660241-94660260 None:intergenic 25.0%
!!! ATTATTATTGTTGTTTCTGG+TGG + chr3.3:94661434-94661453 None:intergenic 25.0%
!!! TGGATTATTATTGTTGTTTC+TGG + chr3.3:94661437-94661456 None:intergenic 25.0%
AAATAGTTCAAATTCCTCTC+AGG - chr3.3:94660143-94660162 MS.gene064872:CDS 30.0%
AACCTTAGAAGCCAAATAAA+AGG + chr3.3:94659965-94659984 None:intergenic 30.0%
AATTCACTACTCCAAATTCA+AGG - chr3.3:94661232-94661251 MS.gene064872:intron 30.0%
ACAATTATTAACAGTAGAGG+AGG - chr3.3:94661736-94661755 MS.gene064872:CDS 30.0%
ACATCAAAAAACTACCCAAA+TGG + chr3.3:94660883-94660902 None:intergenic 30.0%
ATGTCCACTTATGTTAAGTA+GGG - chr3.3:94660339-94660358 MS.gene064872:CDS 30.0%
ATTAAATTTGACAGGAAGAG+TGG - chr3.3:94661170-94661189 MS.gene064872:CDS 30.0%
ATTGTGATTGTGATTGTGAT+TGG + chr3.3:94661549-94661568 None:intergenic 30.0%
CAGGATATTTCATAAATCAG+GGG - chr3.3:94661201-94661220 MS.gene064872:CDS 30.0%
CATGAAAAGAAAAACGAACA+AGG - chr3.3:94659892-94659911 MS.gene064872:CDS 30.0%
GCAGGATATTTCATAAATCA+GGG - chr3.3:94661200-94661219 MS.gene064872:CDS 30.0%
TAATGAGTTCTTCATCAGTT+GGG + chr3.3:94659942-94659961 None:intergenic 30.0%
TATGAGAATGTGAGAGTAAT+TGG + chr3.3:94661360-94661379 None:intergenic 30.0%
TATGTCCACTTATGTTAAGT+AGG - chr3.3:94660338-94660357 MS.gene064872:CDS 30.0%
TGATTGATCATTGAAAAGGA+AGG + chr3.3:94661409-94661428 None:intergenic 30.0%
TGCAGGATATTTCATAAATC+AGG - chr3.3:94661199-94661218 MS.gene064872:CDS 30.0%
TGCTACAAATGCTGAATTTA+GGG - chr3.3:94661708-94661727 MS.gene064872:CDS 30.0%
TTAAATTTGACAGGAAGAGT+GGG - chr3.3:94661171-94661190 MS.gene064872:CDS 30.0%
! AAAAGTGATGAGAGTGTAAA+CGG + chr3.3:94660658-94660677 None:intergenic 30.0%
! TAGAAAGTAGCTTCTGTTTT+TGG + chr3.3:94661517-94661536 None:intergenic 30.0%
!! TACCTTTTATTTGGCTTCTA+AGG - chr3.3:94659960-94659979 MS.gene064872:CDS 30.0%
ATGATGCTCTTAACCTAAGA+TGG - chr3.3:94661575-94661594 MS.gene064872:intron 35.0%
ATTATTAACAGTAGAGGAGG+AGG - chr3.3:94661739-94661758 MS.gene064872:CDS 35.0%
CAAATTCAAGGACATTTAGG+TGG - chr3.3:94661244-94661263 MS.gene064872:intron 35.0%
CACCTAAATGTCCTTGAATT+TGG + chr3.3:94661246-94661265 None:intergenic 35.0%
CCTTCCTTTGTAGAAAACAA+GGG + chr3.3:94660594-94660613 None:intergenic 35.0%
CTACAGTATCTTGTTCATGT+TGG + chr3.3:94660083-94660102 None:intergenic 35.0%
CTCCAAATTCAAGGACATTT+AGG - chr3.3:94661241-94661260 MS.gene064872:intron 35.0%
CTGCTACAAATGCTGAATTT+AGG - chr3.3:94661707-94661726 MS.gene064872:CDS 35.0%
CTTATTATTAGGTTCAAGGG+TGG + chr3.3:94660238-94660257 None:intergenic 35.0%
GAATTAGTTGCAAGTAAAGG+TGG + chr3.3:94661313-94661332 None:intergenic 35.0%
GGTGTGATTGATCATTGAAA+AGG + chr3.3:94661413-94661432 None:intergenic 35.0%
GTAATGAGTTCTTCATCAGT+TGG + chr3.3:94659943-94659962 None:intergenic 35.0%
TAGATAGAATTACACCTGAG+AGG + chr3.3:94660160-94660179 None:intergenic 35.0%
TCATGTGAGTAGAAAATACC+TGG + chr3.3:94660060-94660079 None:intergenic 35.0%
TGATCATTGAAAAGGAAGGT+TGG + chr3.3:94661405-94661424 None:intergenic 35.0%
TGCATGTCTAGTAAATGTGA+TGG - chr3.3:94660109-94660128 MS.gene064872:CDS 35.0%
TGTCCACTTATGTTAAGTAG+GGG - chr3.3:94660340-94660359 MS.gene064872:CDS 35.0%
! GTGAGAGTAATTGGTCATTT+TGG + chr3.3:94661351-94661370 None:intergenic 35.0%
!! TTGAAGAGTAGTTCTGAAGA+TGG + chr3.3:94661457-94661476 None:intergenic 35.0%
!!! AAGACCCTTGTTTTCTACAA+AGG - chr3.3:94660587-94660606 MS.gene064872:intron 35.0%
!!! AGGAGGTAAACAGCTTTTTT+GGG + chr3.3:94661287-94661306 None:intergenic 35.0%
!!! AGTAGCTTCTGTTTTTGGAA+TGG + chr3.3:94661512-94661531 None:intergenic 35.0%
!!! CCTTGTTTTCTACAAAGGAA+GGG - chr3.3:94660592-94660611 MS.gene064872:intron 35.0%
!!! CTTTTTTGGGGGGTTAAATT+AGG + chr3.3:94661274-94661293 None:intergenic 35.0%
!!! TAGGAGGTAAACAGCTTTTT+TGG + chr3.3:94661288-94661307 None:intergenic 35.0%
AAAATACCTGGAAGTTCCCA+TGG + chr3.3:94660048-94660067 None:intergenic 40.0%
AACCCCCTACTTAACATAAG+TGG + chr3.3:94660346-94660365 None:intergenic 40.0%
AAGGTTGGAATGAAGGCAAT+GGG + chr3.3:94661390-94661409 None:intergenic 40.0%
AGAGACAGAAAATACCCAAC+TGG - chr3.3:94660464-94660483 MS.gene064872:intron 40.0%
CATGATCTGATTGCATTCTC+AGG - chr3.3:94661682-94661701 MS.gene064872:CDS 40.0%
CCCTTCCTTTGTAGAAAACA+AGG + chr3.3:94660595-94660614 None:intergenic 40.0%
GAAAAGGAAGGTTGGAATGA+AGG + chr3.3:94661397-94661416 None:intergenic 40.0%
GAGACAGAAAATACCCAACT+GGG - chr3.3:94660465-94660484 MS.gene064872:intron 40.0%
GTCCACTTATGTTAAGTAGG+GGG - chr3.3:94660341-94660360 MS.gene064872:CDS 40.0%
GTCCTATGGGAATAGATTCT+TGG - chr3.3:94661770-94661789 MS.gene064872:CDS 40.0%
TCGTGGTGAAAAGACCAAAT+GGG - chr3.3:94660619-94660638 MS.gene064872:intron 40.0%
TGAAAACTCCTTATTCCCTG+TGG - chr3.3:94661630-94661649 MS.gene064872:CDS 40.0%
! AATGACTTGGGGTATCTGTA+TGG + chr3.3:94660806-94660825 None:intergenic 40.0%
! TGCAGTAGTAGATCCCTTTT+GGG - chr3.3:94660557-94660576 MS.gene064872:intron 40.0%
! TGTTTGTTCTAAGCCCAGTT+GGG + chr3.3:94660481-94660500 None:intergenic 40.0%
!! ATTTGGTCTTTTCACCACGA+GGG + chr3.3:94660619-94660638 None:intergenic 40.0%
!! GAGAGATAACTTGTTGAGCA+CGG + chr3.3:94660742-94660761 None:intergenic 40.0%
!!! AGGTAAACAGCTTTTTTGGG+GGG + chr3.3:94661284-94661303 None:intergenic 40.0%
!!! CCCTTGTTTTCTACAAAGGA+AGG - chr3.3:94660591-94660610 MS.gene064872:intron 40.0%
!!! GAGGTAAACAGCTTTTTTGG+GGG + chr3.3:94661285-94661304 None:intergenic 40.0%
!!! GGAGGTAAACAGCTTTTTTG+GGG + chr3.3:94661286-94661305 None:intergenic 40.0%
ACAAACAGAGCAACAAGTGC+TGG - chr3.3:94660494-94660513 MS.gene064872:intron 45.0%
ACCTCAATAGATGTGAGCCA+TGG - chr3.3:94660028-94660047 MS.gene064872:CDS 45.0%
CAAAGATGGGAGAAAGAGAG+TGG - chr3.3:94660426-94660445 MS.gene064872:CDS 45.0%
CCTCAATAGATGTGAGCCAT+GGG - chr3.3:94660029-94660048 MS.gene064872:CDS 45.0%
CTCGTGGTGAAAAGACCAAA+TGG - chr3.3:94660618-94660637 MS.gene064872:intron 45.0%
CTGGTTACTGGAAAGCAACT+GGG - chr3.3:94660513-94660532 MS.gene064872:intron 45.0%
GAAGGTTGGAATGAAGGCAA+TGG + chr3.3:94661391-94661410 None:intergenic 45.0%
GGCCAAGAATCTATTCCCAT+AGG + chr3.3:94661775-94661794 None:intergenic 45.0%
GGTCTTCTTCATCCCCAAAA+GGG + chr3.3:94660573-94660592 None:intergenic 45.0%
GTACTCATGCATGACCCATT+TGG + chr3.3:94660636-94660655 None:intergenic 45.0%
GTTGCAAGTAAAGGTGGTGT+AGG + chr3.3:94661307-94661326 None:intergenic 45.0%
TATTAGGTTCAAGGGTGGAG+AGG + chr3.3:94660233-94660252 None:intergenic 45.0%
TGCGCAGAAATGGCAAAGAT+GGG - chr3.3:94660413-94660432 MS.gene064872:CDS 45.0%
TTACTGGAAAGCAACTGGGA+AGG - chr3.3:94660517-94660536 MS.gene064872:intron 45.0%
! CTGCAGTAGTAGATCCCTTT+TGG - chr3.3:94660556-94660575 MS.gene064872:intron 45.0%
! CTGTTTGTTCTAAGCCCAGT+TGG + chr3.3:94660482-94660501 None:intergenic 45.0%
! GCAGTAGTAGATCCCTTTTG+GGG - chr3.3:94660558-94660577 MS.gene064872:intron 45.0%
!! CATTTGGTCTTTTCACCACG+AGG + chr3.3:94660620-94660639 None:intergenic 45.0%
!! GTTCTTATCTTGGTGCTGCT+AGG - chr3.3:94661043-94661062 MS.gene064872:CDS 45.0%
!! TTTGGTCTTTTCACCACGAG+GGG + chr3.3:94660618-94660637 None:intergenic 45.0%
AACGAACAAGGTCTACCACC+TGG - chr3.3:94659904-94659923 MS.gene064872:CDS 50.0%
AAGGTCTACCACCTGGTTTC+AGG - chr3.3:94659911-94659930 MS.gene064872:CDS 50.0%
ACCTTGCAGGTGGTATGAGA+AGG + chr3.3:94660683-94660702 None:intergenic 50.0%
AGGAAGAGTGGGTGATATGC+AGG - chr3.3:94661182-94661201 MS.gene064872:CDS 50.0%
AGGAGGAGTAGATGGTCCTA+TGG - chr3.3:94661756-94661775 MS.gene064872:CDS 50.0%
AGTAGAGGAGGAGGAGTAGA+TGG - chr3.3:94661748-94661767 MS.gene064872:CDS 50.0%
ATCTCCATCTCCATCTCCAC+AGG + chr3.3:94661649-94661668 None:intergenic 50.0%
ATTCCCTGTGGAGATGGAGA+TGG - chr3.3:94661642-94661661 MS.gene064872:CDS 50.0%
CCCATGGCTCACATCTATTG+AGG + chr3.3:94660032-94660051 None:intergenic 50.0%
CGAATGGTTGTGCGCAGAAA+TGG - chr3.3:94660403-94660422 MS.gene064872:CDS 50.0%
CTCCATCTCCACAGGGAATA+AGG + chr3.3:94661641-94661660 None:intergenic 50.0%
CTCCTTATTCCCTGTGGAGA+TGG - chr3.3:94661636-94661655 MS.gene064872:CDS 50.0%
GAAAGCAACTGGGAAGGACA+AGG - chr3.3:94660523-94660542 MS.gene064872:intron 50.0%
GAGATGGAGATGGAGATGGA+TGG - chr3.3:94661652-94661671 MS.gene064872:CDS 50.0%
GAGTGTAGAGTCTACCTTGC+AGG + chr3.3:94660696-94660715 None:intergenic 50.0%
GCAAGTAAAGGTGGTGTAGG+AGG + chr3.3:94661304-94661323 None:intergenic 50.0%
GCTGGTTACTGGAAAGCAAC+TGG - chr3.3:94660512-94660531 MS.gene064872:intron 50.0%
GGAGGAGTAGATGGTCCTAT+GGG - chr3.3:94661757-94661776 MS.gene064872:CDS 50.0%
GGGTCTTCTTCATCCCCAAA+AGG + chr3.3:94660574-94660593 None:intergenic 50.0%
GTGCGCAGAAATGGCAAAGA+TGG - chr3.3:94660412-94660431 MS.gene064872:CDS 50.0%
GTTGGGTGAAACCTGAAACC+AGG + chr3.3:94659925-94659944 None:intergenic 50.0%
TCCTTCTCATACCACCTGCA+AGG - chr3.3:94660679-94660698 MS.gene064872:intron 50.0%
TCTCCATCTCCATCTCCACA+GGG + chr3.3:94661648-94661667 None:intergenic 50.0%
TGTAGAGTCTACCTTGCAGG+TGG + chr3.3:94660693-94660712 None:intergenic 50.0%
TGTGGAGATGGAGATGGAGA+TGG - chr3.3:94661648-94661667 MS.gene064872:CDS 50.0%
! TGGAATGGTCTGCTGCTTCA+TGG + chr3.3:94661497-94661516 None:intergenic 50.0%
!! GAGCAACAAGTGCTGGTTAC+TGG - chr3.3:94660501-94660520 MS.gene064872:intron 50.0%
GGGTGAAACCTGAAACCAGG+TGG + chr3.3:94659922-94659941 None:intergenic 55.0%
TGGTGGCAGTTACACGTCCT+AGG - chr3.3:94660301-94660320 MS.gene064872:CDS 55.0%
TGTGAGCCATGGGAACTTCC+AGG - chr3.3:94660039-94660058 MS.gene064872:CDS 55.0%
TACAAAGGAAGGGCCCCTCG+TGG - chr3.3:94660602-94660621 MS.gene064872:intron 60.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 94659850 94661813 94659850 ID=MS.gene064872
chr3.3 mRNA 94659850 94661813 94659850 ID=MS.gene064872.t1;Parent=MS.gene064872
chr3.3 exon 94661603 94661813 94661603 ID=MS.gene064872.t1.exon1;Parent=MS.gene064872.t1
chr3.3 CDS 94661603 94661813 94661603 ID=cds.MS.gene064872.t1;Parent=MS.gene064872.t1
chr3.3 exon 94660963 94661243 94660963 ID=MS.gene064872.t1.exon2;Parent=MS.gene064872.t1
chr3.3 CDS 94660963 94661243 94660963 ID=cds.MS.gene064872.t1;Parent=MS.gene064872.t1
chr3.3 exon 94659850 94660479 94659850 ID=MS.gene064872.t1.exon3;Parent=MS.gene064872.t1
chr3.3 CDS 94659850 94660479 94659850 ID=cds.MS.gene064872.t1;Parent=MS.gene064872.t1
Gene Sequence

>MS.gene064872

ATGATGTTAGCAATGGAAGAAGTACTATGTGAACTTAGTGATCATGAAAAGAAAAACGAACAAGGTCTACCACCTGGTTTCAGGTTTCACCCAACTGATGAAGAACTCATTACCTTTTATTTGGCTTCTAAGGTTTTCAAAAATACTTATTTCAATAATGTCAAGTTTGCTGAAGTTGACCTCAATAGATGTGAGCCATGGGAACTTCCAGGTATTTTCTACTCACATGACCAACATGAACAAGATACTGTAGCTACTTTGCATGTCTAGTAAATGTGATGGTTAAGATAAATAAATAGTTCAAATTCCTCTCAGGTGTAATTCTATCTATATTAAGTATAGCTAGAATAGTATATACAGTAGTATAGTAGTTTCAAATTCCTCTCCACCCTTGAACCTAATAATAAGACATATTGTGCCTATCATATCTAGTTACTAGATTTAAAATGAATGGTGGCAGTTACACGTCCTAGGTATTAATATTTTGTTATGTCCACTTATGTTAAGTAGGGGGTTGAACCACTTCTCTTTATTGCATAAATGTTGAATTGAACGAATGGTTGTGCGCAGAAATGGCAAAGATGGGAGAAAGAGAGTGGTATCTGTTCAGCTTGAGAGACAGAAAATACCCAACTGGGCTTAGAACAAACAGAGCAACAAGTGCTGGTTACTGGAAAGCAACTGGGAAGGACAAGGAAGTTTACAGCTGCAGTAGTAGATCCCTTTTGGGGATGAAGAAGACCCTTGTTTTCTACAAAGGAAGGGCCCCTCGTGGTGAAAAGACCAAATGGGTCATGCATGAGTACCGTTTACACTCTCATCACTTTTCTCCTTCTCATACCACCTGCAAGGTAGACTCTACACTCTCTGTGACATACACGTGCATGCACCGTGCTCAACAAGTTATCTCTCTCCTCTTCAATTTTTGTCTATTTTTGGGTTGACTCATGCGTCCATACAGATACCCCAAGTCATTTCTTTTTTTACTCATAAACTTGACTCTTTTCACTTTTCTTCATAAATTCATTATCCATTTGGGTAGTTTTTTGATGTGATTTGATTTGATTTAGACTAACTATGAATGACCATTTTTCTATTTAATTAATACACTATTCAATTCTGTCTATGCATATTATTAGATTTTTATATTTGTCACAAAATCAACATTTATGTTTATTAAATGTATCTTTTAAGTTCTTATCTTGGTGCTGCTAGGTGAGACTTAATTTTTTCCCAATGAATAAATATACTTTGTTGGCATTTCTATTGCAACACTTTTATTTTATACATGAAATTATAAGGTCTCTCTAACTTTAGAAAATTAAATTTGACAGGAAGAGTGGGTGATATGCAGGATATTTCATAAATCAGGGGAAAAGAGAAATTCACTACTCCAAATTCAAGGACATTTAGGTGGTAATCCTAATTTAACCCCCCAAAAAAGCTGTTTACCTCCTACACCACCTTTACTTGCAACTAATTCATTTACACAACTAGACCAAAATGACCAATTACTCTCACATTCTCATAATATTTTCCCATTGCCTTCATTCCAACCTTCCTTTTCAATGATCAATCACACCACCAGAAACAACAATAATAATCCATCTTCAGAACTACTCTTCAAGTCACAACAATATTACACCATGAAGCAGCAGACCATTCCAAAAACAGAAGCTACTTTCTATGATCAGCACCAATCACAATCACAATCACAATCAATAGATGATGCTCTTAACCTAAGATGGATTATTGACAATAATAATAATACTAATAATTATGAAAACTCCTTATTCCCTGTGGAGATGGAGATGGAGATGGATGGTGCTGCTCATGATCTGATTGCATTCTCAGGAGCTGCTACAAATGCTGAATTTAGGGACATGACAATTATTAACAGTAGAGGAGGAGGAGTAGATGGTCCTATGGGAATAGATTCTTGGCCACATGCCCAACTTGTCTAA
Protein sequence

>MS.gene064872.t1

MMLAMEEVLCELSDHEKKNEQGLPPGFRFHPTDEELITFYLASKVFKNTYFNNVKFAEVDLNRCEPWELPEMAKMGEREWYLFSLRDRKYPTGLRTNRATSAGYWKATGKDKEVYSCSSRSLLGMKKTLVFYKGRAPRGEKTKWVMHEYRLHSHHFSPSHTTCKEEWVICRIFHKSGEKRNSLLQIQGHLGGNPNLTPQKSCLPPTPPLLATNSFTQLDQNDQLLSHSHNIFPLPSFQPSFSMINHTTRNNNNNPSSELLFKSQQYYTMKQQTIPKTEATFYDQHQSQSQSQSIDDALNLRWIIDNNNNTNNYENSLFPVEMEMEMDGAAHDLIAFSGAATNAEFRDMTIINSRGGGVDGPMGIDSWPHAQLV