AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene050585


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050585.t1 MTR_7g116510 98.895 362 4 0 1 362 1 362 0.0 737
MS.gene050585.t1 MTR_1g024890 74.044 366 87 3 1 359 1 365 0.0 569
MS.gene050585.t1 MTR_1g079540 72.951 366 92 5 1 360 1 365 0.0 547
MS.gene050585.t1 MTR_7g116520 72.269 357 96 2 7 361 14 369 0.0 546
MS.gene050585.t1 MTR_7g116500 70.166 362 102 2 1 362 14 369 0.0 529
MS.gene050585.t1 MTR_6g021530 72.303 343 93 2 21 362 25 366 0.0 524
MS.gene050585.t1 MTR_7g116570 71.802 344 96 1 19 362 28 370 0.0 521
MS.gene050585.t1 MTR_4g019880 69.359 359 106 3 7 362 13 370 0.0 520
MS.gene050585.t1 MTR_1g069175 63.435 361 127 4 4 360 10 369 1.97e-171 482
MS.gene050585.t1 MTR_7g008060 64.345 359 111 3 4 362 15 356 1.05e-168 474
MS.gene050585.t1 MTR_1g079530 64.674 368 113 6 1 361 1 358 4.43e-168 473
MS.gene050585.t1 MTR_1g079590 68.447 206 59 2 1 200 1 206 5.91e-98 290
MS.gene050585.t1 MTR_8g079050 39.645 338 196 6 25 355 37 373 2.14e-77 243
MS.gene050585.t1 MTR_4g122200 38.746 351 211 3 4 352 14 362 1.04e-76 241
MS.gene050585.t1 MTR_5g078210 39.169 337 199 5 5 340 6 337 1.90e-76 239
MS.gene050585.t1 MTR_3g098270 37.396 361 217 3 1 352 3 363 5.88e-75 237
MS.gene050585.t1 MTR_5g084750 36.550 342 208 5 5 340 6 344 4.27e-74 233
MS.gene050585.t1 MTR_2g033930 38.922 334 198 4 25 356 32 361 5.57e-74 234
MS.gene050585.t1 MTR_2g033920 37.143 350 216 3 9 356 19 366 1.10e-73 233
MS.gene050585.t1 MTR_3g005650 36.390 349 214 6 9 355 12 354 4.08e-73 231
MS.gene050585.t1 MTR_4g035353 35.650 331 212 1 25 355 31 360 1.88e-70 224
MS.gene050585.t1 MTR_5g093090 35.635 362 217 6 5 357 7 361 3.52e-70 224
MS.gene050585.t1 MTR_0565s0010 35.457 361 226 7 1 358 9 365 3.08e-69 221
MS.gene050585.t1 MTR_5g084770 38.750 320 188 6 25 340 28 343 1.76e-68 219
MS.gene050585.t1 MTR_3g435540 35.860 343 213 5 1 341 1 338 5.49e-68 218
MS.gene050585.t1 MTR_3g082830 35.045 331 209 5 21 348 34 361 6.13e-68 218
MS.gene050585.t1 MTR_8g087890 35.475 358 223 6 4 358 11 363 1.48e-67 217
MS.gene050585.t1 MTR_4g108690 38.170 317 191 4 27 341 29 342 7.97e-67 215
MS.gene050585.t1 MTR_3g052490 34.501 371 219 8 1 358 7 366 8.30e-67 215
MS.gene050585.t1 MTR_3g024510 36.164 365 215 9 6 358 12 370 1.20e-66 215
MS.gene050585.t1 MTR_3g464730 36.364 319 199 4 25 341 28 344 1.82e-66 214
MS.gene050585.t1 MTR_5g009100 35.347 331 212 2 27 356 48 377 1.99e-65 212
MS.gene050585.t1 MTR_8g075230 37.107 318 195 4 25 340 36 350 3.48e-65 211
MS.gene050585.t1 MTR_5g084790 34.627 335 212 6 10 341 17 347 5.20e-64 207
MS.gene050585.t1 MTR_1g025760 36.449 321 195 4 25 341 80 395 4.75e-63 206
MS.gene050585.t1 MTR_3g023220 36.443 343 199 9 18 356 24 351 8.14e-63 204
MS.gene050585.t1 MTR_3g052480 34.066 364 222 6 5 358 13 368 2.15e-62 204
MS.gene050585.t1 MTR_2g100620 35.938 320 197 5 25 340 31 346 5.68e-62 202
MS.gene050585.t1 MTR_5g022640 35.737 319 199 5 25 340 43 358 8.07e-61 199
MS.gene050585.t1 MTR_1g079570 62.238 143 52 2 218 359 1 142 1.02e-60 192
MS.gene050585.t1 MTR_8g014910 34.796 319 202 5 25 340 32 347 1.13e-60 199
MS.gene050585.t1 MTR_1g025700 37.538 325 196 4 25 348 50 368 9.23e-60 197
MS.gene050585.t1 MTR_8g074570 33.333 342 203 7 27 355 40 369 1.09e-59 197
MS.gene050585.t1 MTR_5g074270 34.603 315 199 5 25 335 33 344 2.73e-59 196
MS.gene050585.t1 MTR_3g052580 32.164 342 216 5 25 358 28 361 3.18e-59 196
MS.gene050585.t1 MTR_1g025780 33.429 350 220 6 1 341 9 354 3.75e-59 195
MS.gene050585.t1 MTR_3g052580 32.164 342 216 5 25 358 27 360 5.76e-59 196
MS.gene050585.t1 MTR_1g025680 37.618 319 194 4 25 341 34 349 1.48e-58 196
MS.gene050585.t1 MTR_2g084585 33.430 344 222 5 1 340 4 344 3.41e-58 192
MS.gene050585.t1 MTR_1g025720 36.000 325 201 4 25 348 37 355 3.78e-58 192
MS.gene050585.t1 MTR_3g005660 34.911 338 213 7 22 355 33 367 3.67e-57 190
MS.gene050585.t1 MTR_8g087870 31.476 359 231 6 3 358 5 351 7.96e-57 189
MS.gene050585.t1 MTR_5g078210 37.809 283 171 4 5 286 6 284 9.00e-57 188
MS.gene050585.t1 MTR_8g075220 34.568 324 200 8 25 340 40 359 2.76e-56 188
MS.gene050585.t1 MTR_2g044100 34.104 346 213 6 24 361 42 380 2.04e-55 186
MS.gene050585.t1 MTR_5g022630 32.951 349 218 7 5 340 14 359 1.05e-54 184
MS.gene050585.t1 MTR_2g033920 36.918 279 173 2 9 286 19 295 3.93e-54 181
MS.gene050585.t1 MTR_3g114120 32.602 319 207 4 25 340 47 360 7.07e-54 182
MS.gene050585.t1 MTR_8g075200 32.812 320 208 6 25 341 41 356 1.13e-53 182
MS.gene050585.t1 MTR_4g056280 33.129 326 213 4 25 348 30 352 1.35e-53 181
MS.gene050585.t1 MTR_3g114090 34.688 320 202 6 25 341 36 351 6.04e-53 179
MS.gene050585.t1 MTR_5g083040 31.832 333 215 5 19 343 26 354 1.29e-51 176
MS.gene050585.t1 MTR_4g056160 32.326 331 208 7 20 340 20 344 1.36e-51 175
MS.gene050585.t1 MTR_2g017925 32.551 341 209 9 21 356 29 353 4.51e-51 174
MS.gene050585.t1 MTR_1g025910 33.628 339 205 7 30 355 41 372 9.39e-51 174
MS.gene050585.t1 MTR_0009s0250 35.220 318 186 9 21 334 29 330 4.38e-50 171
MS.gene050585.t1 MTR_8g031420 31.492 362 225 9 5 356 13 361 5.18e-50 171
MS.gene050585.t1 MTR_4g087985 31.714 350 217 9 10 342 22 366 5.23e-50 171
MS.gene050585.t1 MTR_2g017965 32.258 341 216 9 21 356 29 359 2.03e-49 170
MS.gene050585.t1 MTR_8g074560 31.609 348 210 9 25 356 31 366 4.79e-49 169
MS.gene050585.t1 MTR_8g031430 31.897 348 214 8 18 356 30 363 4.84e-49 169
MS.gene050585.t1 MTR_2g017955 30.499 341 219 8 21 355 29 357 7.18e-49 169
MS.gene050585.t1 MTR_2g017875 30.145 345 223 8 20 358 29 361 1.39e-48 167
MS.gene050585.t1 MTR_2g015080 30.973 339 218 7 5 331 18 352 2.52e-48 167
MS.gene050585.t1 MTR_8g031400 31.700 347 216 8 18 356 30 363 6.70e-48 166
MS.gene050585.t1 MTR_8g074580 28.871 381 213 7 27 357 46 418 1.27e-46 164
MS.gene050585.t1 MTR_8g022810 31.212 330 207 8 20 339 36 355 4.93e-45 159
MS.gene050585.t1 MTR_8g022790 29.640 361 232 10 5 358 16 361 7.74e-45 158
MS.gene050585.t1 MTR_8g031390 31.287 342 213 8 18 351 30 357 9.87e-45 158
MS.gene050585.t1 MTR_2g017915 31.287 342 196 8 21 356 29 337 1.34e-44 157
MS.gene050585.t1 MTR_2g461580 26.377 345 234 9 18 359 24 351 2.34e-42 151
MS.gene050585.t1 MTR_5g093090 32.990 291 179 6 5 286 7 290 8.94e-42 148
MS.gene050585.t1 MTR_3g021460 27.988 343 211 10 25 356 31 348 1.02e-41 149
MS.gene050585.t1 MTR_8g031390 31.507 292 183 7 18 306 30 307 9.72e-38 138
MS.gene050585.t1 MTR_1g030275 30.081 369 216 12 1 342 15 368 6.04e-36 135
MS.gene050585.t1 MTR_7g111780 30.347 346 210 12 17 349 29 356 9.26e-33 125
MS.gene050585.t1 MTR_0127s0040 27.311 238 168 4 123 358 4 238 4.60e-30 115
MS.gene050585.t1 MTR_8g089805 27.027 370 227 11 3 342 18 374 2.03e-29 117
MS.gene050585.t1 MTR_8g022810 26.888 331 169 9 20 340 36 303 2.55e-29 115
MS.gene050585.t1 MTR_1g030268 29.971 347 199 12 25 343 40 370 4.00e-29 116
MS.gene050585.t1 MTR_2g018015 34.500 200 129 2 21 219 32 230 5.77e-29 114
MS.gene050585.t1 MTR_1g030220 29.380 371 212 14 5 343 20 372 5.96e-29 115
MS.gene050585.t1 MTR_6g081170 62.791 86 29 1 33 118 1 83 7.52e-29 108
MS.gene050585.t1 MTR_2g087292 29.260 311 137 8 25 334 33 261 7.91e-28 110
MS.gene050585.t1 MTR_5g087690 26.814 317 213 6 25 335 50 353 1.90e-27 111
MS.gene050585.t1 MTR_6g007100 28.530 347 215 11 11 343 22 349 1.91e-27 111
MS.gene050585.t1 MTR_2g015630 29.552 335 205 13 30 342 36 361 3.52e-27 110
MS.gene050585.t1 MTR_7g087190 26.596 376 224 13 5 343 19 379 3.98e-27 110
MS.gene050585.t1 MTR_8g038680 30.833 360 208 12 10 343 16 360 4.91e-27 110
MS.gene050585.t1 MTR_2g015580 28.763 372 234 13 5 355 27 388 4.69e-26 108
MS.gene050585.t1 MTR_5g093090 36.095 169 100 3 5 165 7 175 5.36e-26 103
MS.gene050585.t1 MTR_2g017925 28.279 244 148 7 122 356 25 250 5.44e-26 105
MS.gene050585.t1 MTR_6g007090 30.612 343 199 12 25 343 39 366 7.51e-26 107
MS.gene050585.t1 MTR_1108s0010 28.378 222 145 3 128 348 3 211 1.75e-25 102
MS.gene050585.t1 MTR_5g016030 61.538 65 25 0 243 307 7 71 3.49e-25 97.4
MS.gene050585.t1 MTR_8g028160 26.776 366 223 13 10 343 18 370 3.57e-25 105
MS.gene050585.t1 MTR_1g030230 26.344 372 230 12 1 343 8 364 5.64e-25 104
MS.gene050585.t1 MTR_3g463960 29.706 340 209 14 24 342 43 373 6.51e-25 104
MS.gene050585.t1 MTR_3g463950 29.706 340 209 14 24 342 43 373 6.51e-25 104
MS.gene050585.t1 MTR_3g463970 29.706 340 209 14 24 342 43 373 6.51e-25 104
MS.gene050585.t1 MTR_3g463940 29.706 340 209 14 24 342 43 373 6.51e-25 104
MS.gene050585.t1 MTR_7g116870 26.703 367 227 13 5 343 11 363 9.42e-25 104
MS.gene050585.t1 MTR_2g015590 28.235 340 212 12 25 342 31 360 9.47e-25 103
MS.gene050585.t1 MTR_6g007095 28.895 353 203 14 18 343 37 368 1.34e-24 105
MS.gene050585.t1 MTR_6g007095 28.475 295 183 10 63 343 404 684 3.79e-22 98.2
MS.gene050585.t1 MTR_1g060500 26.126 333 211 12 24 341 39 351 1.55e-24 103
MS.gene050585.t1 MTR_1g092750 27.950 322 184 13 26 329 41 332 6.62e-24 101
MS.gene050585.t1 MTR_8g089805 26.736 288 176 8 85 342 24 306 1.10e-23 100
MS.gene050585.t1 MTR_7g111780 29.259 270 165 8 93 349 1 257 1.48e-23 98.6
MS.gene050585.t1 MTR_1g060490 25.455 330 209 14 24 341 36 340 3.30e-23 99.4
MS.gene050585.t1 MTR_3g463930 29.107 347 209 14 24 342 43 380 3.78e-23 99.8
MS.gene050585.t1 MTR_1g092690 26.899 316 193 13 26 329 52 341 6.04e-23 99.0
MS.gene050585.t1 MTR_1g092740 26.708 322 201 12 19 329 32 329 6.70e-23 98.6
MS.gene050585.t1 MTR_1g082390 27.671 365 218 14 6 340 12 360 1.36e-22 97.8
MS.gene050585.t1 MTR_2g043980 28.739 341 192 14 25 342 34 346 1.74e-22 97.4
MS.gene050585.t1 MTR_4g036375 35.802 162 92 3 25 180 30 185 1.82e-22 94.0
MS.gene050585.t1 MTR_3g069780 29.155 343 212 15 24 346 29 360 1.83e-22 97.4
MS.gene050585.t1 MTR_7g104220 25.309 324 210 10 26 339 43 344 2.11e-22 97.1
MS.gene050585.t1 MTR_3g438030 28.571 343 214 14 24 346 29 360 1.31e-21 95.1
MS.gene050585.t1 MTR_7g113860 27.299 348 208 11 25 342 29 361 1.40e-21 95.1
MS.gene050585.t1 MTR_7g033150 24.438 356 216 12 24 343 34 372 1.88e-21 94.7
MS.gene050585.t1 MTR_1g030265 27.797 295 161 10 86 343 58 337 7.78e-20 89.7
MS.gene050585.t1 MTR_0029s0050 26.453 344 200 13 24 342 29 344 1.48e-19 89.0
MS.gene050585.t1 MTR_2g079090 25.731 342 205 12 24 342 29 344 1.50e-19 89.0
MS.gene050585.t1 MTR_1g092760 26.398 322 188 14 26 329 40 330 1.73e-19 89.0
MS.gene050585.t1 MTR_7g033155 24.933 373 213 13 21 343 31 386 2.07e-19 89.0
MS.gene050585.t1 MTR_0029s0100 26.453 344 200 13 24 342 29 344 2.39e-19 88.6
MS.gene050585.t1 MTR_7g113860 25.543 368 229 12 6 343 16 368 3.12e-19 88.6
MS.gene050585.t1 MTR_2g079080 25.294 340 209 10 24 342 29 344 3.28e-19 88.2
MS.gene050585.t1 MTR_4g104240 25.886 367 227 15 6 343 13 363 1.54e-18 86.3
MS.gene050585.t1 MTR_2g015650 28.286 350 205 16 23 342 26 359 3.08e-18 85.5
MS.gene050585.t1 MTR_1g030268 28.571 280 166 10 25 286 40 303 3.47e-17 82.0
MS.gene050585.t1 MTR_6g049220 49.438 89 44 1 25 112 30 118 5.53e-17 78.2
MS.gene050585.t1 MTR_8g012540 28.527 319 195 10 10 310 16 319 5.68e-17 81.3
MS.gene050585.t1 MTR_2g015670 28.614 339 204 15 23 342 26 345 5.70e-17 81.6
MS.gene050585.t1 MTR_3g069520 28.205 351 203 17 24 346 29 358 2.15e-16 80.1
MS.gene050585.t1 MTR_5g074210 28.369 141 100 1 198 337 62 202 3.89e-16 77.0
MS.gene050585.t1 MTR_7g113860 26.838 272 158 11 101 342 33 293 1.01e-15 77.4
MS.gene050585.t1 MTR_5g084880 33.333 111 74 0 176 286 2 112 3.54e-15 72.4
MS.gene050585.t1 MTR_7g116480 48.454 97 19 4 15 109 6 73 1.59e-14 70.5
MS.gene050585.t1 MTR_7g033165 28.571 287 161 13 25 286 33 300 2.28e-14 73.6
MS.gene050585.t1 MTR_6g049230 32.143 112 76 0 199 310 71 182 7.86e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050585.t1 AT5G33370 71.901 363 100 2 1 362 5 366 0.0 545
MS.gene050585.t1 AT3G04290 75.221 339 83 1 22 360 26 363 0.0 538
MS.gene050585.t1 AT5G18430 66.298 362 118 2 1 358 1 362 6.34e-175 491
MS.gene050585.t1 AT4G28780 63.866 357 128 1 5 361 11 366 1.30e-171 482
MS.gene050585.t1 AT5G33370 71.277 282 79 2 6 286 10 290 1.74e-145 415
MS.gene050585.t1 AT5G15720 39.645 338 185 4 25 352 30 358 2.31e-80 250
MS.gene050585.t1 AT2G23540 38.872 337 200 5 25 355 48 384 1.19e-77 244
MS.gene050585.t1 AT3G50400 40.774 336 190 8 25 352 34 368 1.09e-76 241
MS.gene050585.t1 AT1G71691 39.583 336 196 6 25 359 55 384 4.73e-73 232
MS.gene050585.t1 AT1G29670 37.989 358 213 7 5 358 11 363 2.17e-72 229
MS.gene050585.t1 AT1G71250 35.211 355 225 2 5 355 17 370 2.27e-72 230
MS.gene050585.t1 AT1G29660 36.592 358 220 5 5 358 10 364 6.14e-72 228
MS.gene050585.t1 AT1G29670 37.989 358 213 7 5 358 79 431 1.31e-71 229
MS.gene050585.t1 AT5G08460 37.126 334 207 1 25 355 49 382 4.16e-71 227
MS.gene050585.t1 AT5G37690 38.012 342 200 6 5 340 4 339 4.83e-70 223
MS.gene050585.t1 AT5G45670 36.212 359 221 6 5 358 7 362 5.78e-70 223
MS.gene050585.t1 AT2G42990 37.237 333 204 4 11 341 14 343 1.04e-69 222
MS.gene050585.t1 AT1G75890 37.224 317 193 5 25 338 47 360 1.68e-69 222
MS.gene050585.t1 AT1G75890 37.224 317 193 5 25 338 76 389 2.90e-69 223
MS.gene050585.t1 AT1G75890 36.170 329 193 6 25 338 47 373 6.38e-68 218
MS.gene050585.t1 AT4G18970 37.725 334 200 5 26 355 29 358 3.42e-67 216
MS.gene050585.t1 AT2G04570 34.604 341 218 4 5 343 8 345 4.49e-67 215
MS.gene050585.t1 AT1G75880 34.181 354 217 5 1 340 16 367 7.65e-67 216
MS.gene050585.t1 AT1G74460 36.418 335 208 4 9 341 7 338 2.03e-66 214
MS.gene050585.t1 AT4G18970 37.725 334 200 5 26 355 29 358 2.26e-66 215
MS.gene050585.t1 AT1G75880 34.181 354 216 6 1 340 16 366 5.96e-66 213
MS.gene050585.t1 AT4G26790 35.737 319 200 4 25 341 29 344 1.19e-65 212
MS.gene050585.t1 AT4G26790 35.737 319 200 4 25 341 29 344 1.19e-65 212
MS.gene050585.t1 AT1G33811 35.484 341 211 6 21 355 30 367 2.42e-64 209
MS.gene050585.t1 AT1G58430 35.143 350 212 7 1 337 1 348 2.51e-64 209
MS.gene050585.t1 AT5G37690 36.550 342 197 7 5 340 4 331 3.51e-64 208
MS.gene050585.t1 AT2G30310 35.244 349 212 8 1 337 1 347 1.36e-63 207
MS.gene050585.t1 AT5G41890 35.143 350 202 8 21 352 27 369 1.96e-63 207
MS.gene050585.t1 AT2G30220 35.043 351 211 8 1 339 3 348 5.31e-63 205
MS.gene050585.t1 AT5G42170 36.792 318 193 4 25 340 50 361 7.79e-63 205
MS.gene050585.t1 AT1G06990 34.395 314 200 4 25 335 37 347 2.29e-61 201
MS.gene050585.t1 AT5G03820 36.311 347 207 7 5 340 6 349 2.41e-61 201
MS.gene050585.t1 AT3G53100 36.207 348 209 7 1 340 1 343 3.97e-61 200
MS.gene050585.t1 AT3G16370 36.050 319 198 5 25 340 30 345 4.24e-61 200
MS.gene050585.t1 AT2G31540 34.615 364 214 10 1 345 1 359 4.27e-61 200
MS.gene050585.t1 AT2G24560 34.012 344 207 9 1 329 1 339 7.24e-61 200
MS.gene050585.t1 AT1G20120 34.891 321 200 5 25 341 78 393 9.43e-61 201
MS.gene050585.t1 AT5G03820 36.311 347 207 7 5 340 34 377 1.03e-60 200
MS.gene050585.t1 AT4G10950 33.934 333 218 2 25 356 71 402 1.05e-60 201
MS.gene050585.t1 AT5G03810 35.260 346 211 6 5 340 3 345 4.13e-60 197
MS.gene050585.t1 AT5G22810 37.003 327 196 6 21 340 28 351 8.82e-60 197
MS.gene050585.t1 AT4G10950 33.832 334 213 4 25 356 71 398 8.99e-59 195
MS.gene050585.t1 AT5G15720 35.540 287 168 3 76 352 48 327 1.82e-58 192
MS.gene050585.t1 AT5G55050 35.777 341 205 9 26 357 40 375 5.10e-58 192
MS.gene050585.t1 AT2G19060 35.632 348 194 11 1 342 13 336 1.02e-57 191
MS.gene050585.t1 AT5G15720 38.406 276 151 4 25 290 30 296 1.10e-56 187
MS.gene050585.t1 AT3G14820 32.722 327 207 6 25 347 32 349 3.95e-56 187
MS.gene050585.t1 AT1G20135 32.934 334 207 7 5 336 9 327 8.51e-56 186
MS.gene050585.t1 AT5G45950 33.968 315 199 7 25 338 40 346 9.63e-56 186
MS.gene050585.t1 AT1G59406 34.169 319 200 6 25 340 30 341 1.56e-55 186
MS.gene050585.t1 AT1G59030 34.169 319 200 6 25 340 30 341 1.56e-55 186
MS.gene050585.t1 AT1G58725 34.169 319 200 6 25 340 30 341 1.56e-55 186
MS.gene050585.t1 AT1G75900 33.542 319 204 5 25 340 43 356 3.56e-55 185
MS.gene050585.t1 AT1G71691 37.063 286 174 5 75 359 3 283 3.78e-55 182
MS.gene050585.t1 AT5G45960 34.603 315 193 7 25 331 47 356 2.35e-54 183
MS.gene050585.t1 AT2G19050 34.056 323 188 8 26 342 32 335 1.86e-53 180
MS.gene050585.t1 AT1G73610 35.826 321 184 8 25 341 35 337 5.49e-53 179
MS.gene050585.t1 AT1G58520 33.542 319 195 7 25 340 30 334 1.61e-51 175
MS.gene050585.t1 AT1G58525 33.542 319 195 7 25 340 30 334 1.61e-51 175
MS.gene050585.t1 AT5G40990 30.997 371 230 9 7 359 12 374 2.81e-51 175
MS.gene050585.t1 AT2G40250 32.733 333 209 5 25 350 36 360 4.04e-51 174
MS.gene050585.t1 AT1G20132 31.832 333 211 7 25 351 61 383 4.48e-51 175
MS.gene050585.t1 AT4G30140 34.328 335 203 8 22 356 30 347 1.25e-50 172
MS.gene050585.t1 AT1G71691 39.924 263 151 6 25 286 55 311 6.36e-50 170
MS.gene050585.t1 AT2G19010 31.700 347 215 10 1 342 5 334 8.33e-50 171
MS.gene050585.t1 AT2G19010 31.412 347 216 9 1 342 35 364 2.02e-49 170
MS.gene050585.t1 AT5G63170 31.737 334 207 8 1 331 6 321 3.73e-49 169
MS.gene050585.t1 AT2G24560 33.555 301 180 9 1 286 1 296 5.84e-49 167
MS.gene050585.t1 AT1G71120 33.134 335 204 9 25 352 31 352 1.07e-48 168
MS.gene050585.t1 AT1G20130 32.012 328 204 7 25 340 204 524 7.12e-48 170
MS.gene050585.t1 AT3G43570 30.259 347 200 7 1 340 1 312 8.06e-48 164
MS.gene050585.t1 AT1G20130 32.012 328 204 7 25 340 184 504 9.74e-48 169
MS.gene050585.t1 AT1G75910 32.710 321 200 6 25 341 28 336 1.67e-47 164
MS.gene050585.t1 AT4G16230 40.984 244 133 4 4 238 2 243 2.36e-47 161
MS.gene050585.t1 AT1G75930 34.545 330 191 9 25 344 29 343 1.17e-46 162
MS.gene050585.t1 AT1G53940 32.277 347 214 10 25 359 39 376 3.99e-46 162
MS.gene050585.t1 AT1G75920 31.562 320 204 6 25 341 29 336 9.71e-46 160
MS.gene050585.t1 AT2G19050 36.400 250 144 5 26 272 32 269 1.46e-44 155
MS.gene050585.t1 AT3G14225 29.769 346 222 7 25 358 37 373 9.55e-43 152
MS.gene050585.t1 AT3G14225 29.395 347 226 6 25 358 37 377 1.29e-42 152
MS.gene050585.t1 AT1G75920 30.149 335 204 7 25 341 24 346 2.81e-42 151
MS.gene050585.t1 AT1G53990 30.058 346 214 9 25 358 35 364 5.39e-42 150
MS.gene050585.t1 AT1G23500 30.435 345 221 6 1 342 11 339 1.89e-41 148
MS.gene050585.t1 AT3G43550 31.741 293 186 6 1 286 1 286 1.01e-40 145
MS.gene050585.t1 AT2G03980 32.595 316 194 9 25 332 43 347 2.09e-40 146
MS.gene050585.t1 AT2G03980 32.595 316 194 9 25 332 43 347 2.09e-40 146
MS.gene050585.t1 AT2G03980 32.595 316 194 9 25 332 43 347 2.09e-40 146
MS.gene050585.t1 AT2G03980 32.595 316 194 9 25 332 43 347 2.09e-40 146
MS.gene050585.t1 AT1G53920 29.538 325 214 7 25 342 48 364 1.92e-38 141
MS.gene050585.t1 AT1G75920 29.781 319 180 7 25 341 29 305 3.98e-37 136
MS.gene050585.t1 AT1G75920 30.272 294 190 6 51 341 27 308 4.34e-36 133
MS.gene050585.t1 AT2G31550 32.883 222 138 4 131 345 1 218 3.21e-34 126
MS.gene050585.t1 AT1G09390 32.081 346 196 12 23 349 35 360 4.35e-34 129
MS.gene050585.t1 AT1G53940 32.472 271 168 9 25 289 39 300 3.31e-30 117
MS.gene050585.t1 AT1G56670 30.636 346 204 13 21 349 37 363 2.69e-29 116
MS.gene050585.t1 AT5G14450 28.496 379 217 14 4 342 9 373 1.60e-28 114
MS.gene050585.t1 AT3G26430 29.474 380 217 15 1 343 1 366 1.68e-28 114
MS.gene050585.t1 AT3G62280 29.290 338 206 12 29 351 40 359 4.36e-28 113
MS.gene050585.t1 AT1G54030 26.331 338 221 11 24 358 51 363 2.69e-27 112
MS.gene050585.t1 AT5G03610 25.672 335 213 12 22 343 40 351 5.34e-26 107
MS.gene050585.t1 AT4G01130 26.882 372 228 13 5 346 14 371 1.47e-25 106
MS.gene050585.t1 AT2G04020 33.190 232 129 7 25 243 43 261 4.53e-25 102
MS.gene050585.t1 AT1G54020 26.048 334 222 9 27 356 35 347 5.18e-25 104
MS.gene050585.t1 AT3G09930 26.687 326 199 12 22 331 36 337 1.27e-24 103
MS.gene050585.t1 AT3G09930 26.687 326 199 12 22 331 36 337 1.27e-24 103
MS.gene050585.t1 AT3G27950 30.458 371 201 15 5 343 13 358 1.78e-24 103
MS.gene050585.t1 AT2G04020 34.450 209 118 5 25 226 43 239 2.68e-24 102
MS.gene050585.t1 AT4G16233 38.211 123 75 1 234 355 5 127 3.21e-24 97.1
MS.gene050585.t1 AT5G45910 28.142 366 227 14 5 342 7 364 1.14e-23 100
MS.gene050585.t1 AT3G14220 26.099 364 233 13 6 357 13 352 1.87e-22 97.4
MS.gene050585.t1 AT2G27360 27.419 372 220 17 5 342 8 363 3.65e-22 97.1
MS.gene050585.t1 AT1G54790 27.697 343 205 12 29 342 36 364 7.33e-22 95.9
MS.gene050585.t1 AT1G54000 24.348 345 233 10 25 360 36 361 1.26e-21 95.5
MS.gene050585.t1 AT1G67830 26.857 350 209 12 25 342 30 364 1.28e-21 95.1
MS.gene050585.t1 AT1G31550 27.697 343 201 15 29 342 40 364 2.06e-21 94.7
MS.gene050585.t1 AT1G28610 28.000 350 191 18 29 342 35 359 9.85e-21 92.8
MS.gene050585.t1 AT4G16220 51.327 113 51 3 6 116 10 120 1.19e-20 90.1
MS.gene050585.t1 AT1G54010 23.512 336 233 8 27 356 38 355 1.11e-19 89.7
MS.gene050585.t1 AT1G28570 27.114 343 214 16 24 342 33 363 1.40e-19 89.7
MS.gene050585.t1 AT1G28650 26.273 373 232 15 1 342 6 366 1.55e-19 89.4
MS.gene050585.t1 AT3G14210 26.361 349 213 14 25 356 36 357 3.29e-19 88.6
MS.gene050585.t1 AT1G28600 27.954 347 205 15 24 342 30 359 7.58e-19 87.4
MS.gene050585.t1 AT1G28580 28.779 344 207 16 24 342 36 366 1.37e-18 86.7
MS.gene050585.t1 AT4G01130 25.430 291 181 9 86 346 1 285 1.70e-18 85.1
MS.gene050585.t1 AT1G54790 26.667 345 210 12 27 342 33 363 2.12e-18 85.9
MS.gene050585.t1 AT1G31550 27.193 342 201 15 29 342 40 361 2.24e-18 85.9
MS.gene050585.t1 AT1G56670 28.763 299 176 10 9 286 15 297 2.48e-18 84.7
MS.gene050585.t1 AT1G28670 27.326 344 213 13 24 342 34 365 4.89e-18 85.1
MS.gene050585.t1 AT3G05180 25.287 348 215 11 25 342 36 368 7.15e-18 84.3
MS.gene050585.t1 AT1G28640 27.035 344 215 13 24 343 34 365 1.62e-17 83.6
MS.gene050585.t1 AT3G48460 26.344 372 229 17 1 343 9 364 2.93e-17 82.8
MS.gene050585.t1 AT4G01130 26.087 299 190 11 5 286 14 298 7.22e-17 80.9
MS.gene050585.t1 AT1G54030 27.386 241 149 9 24 261 51 268 2.26e-16 79.3
MS.gene050585.t1 AT2G36325 26.254 339 205 15 22 343 44 354 2.16e-15 77.0
MS.gene050585.t1 AT3G62280 27.612 268 168 8 29 286 40 291 3.41e-15 75.9
MS.gene050585.t1 AT1G54790 24.798 371 210 13 27 342 33 389 2.01e-13 71.2

Find 98 sgRNAs with CRISPR-Local

Find 158 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAGAGACCTTAATGCATTT+TGG 0.160455 7.3:-1631482 MS.gene050585:CDS
CATTGCAATGGCTACTTCTT+TGG 0.212631 7.3:-1634068 None:intergenic
TATGCAGAGGCTTTATGATT+TGG 0.276116 7.3:-1632249 MS.gene050585:intron
TGACGAGATCTTGCTGAAAA+AGG 0.277163 7.3:+1633144 None:intergenic
ATGAGATAACGAACATAATC+TGG 0.294327 7.3:+1633111 None:intergenic
AACTTTGCATCCGCTGGAAT+TGG 0.294980 7.3:-1633512 MS.gene050585:CDS
ATTACCAACCCTCAAGCTTA+TGG 0.324844 7.3:-1632008 MS.gene050585:intron
GTTGGAGAGAAGCTTCTAAT+TGG 0.327488 7.3:-1633539 MS.gene050585:CDS
ATGCAGAGGCTTTATGATTT+GGG 0.340229 7.3:-1632248 MS.gene050585:intron
GCTTGTAGATTCTAATGATA+TGG 0.345770 7.3:+1633304 None:intergenic
GAGCACTGCCCCTAAGGATT+TGG 0.350165 7.3:+1631415 None:intergenic
TAATTACAGGTTTGGAGCTT+GGG 0.354330 7.3:-1633598 MS.gene050585:intron
ATGCATCCCAAAATGCATTA+AGG 0.356356 7.3:+1631475 None:intergenic
CCTACTGGGCGTTTCTCTAA+TGG 0.374174 7.3:-1633878 MS.gene050585:CDS
CCGAGTACCGCAAAGTTCTC+AGG 0.377231 7.3:-1633086 MS.gene050585:CDS
TCATAGTCAACCAAATCCTT+AGG 0.379086 7.3:-1631425 MS.gene050585:CDS
ATGCATTAAGGTCTCTGTTT+GGG 0.379408 7.3:+1631487 None:intergenic
ACTAGTAGTGGGCTCAAGTA+TGG 0.379867 7.3:+1633560 None:intergenic
TCGACGCTACACTGACCATT+TGG 0.397889 7.3:+1632152 None:intergenic
AACAAGTTGAGGATTGTATA+AGG 0.398978 7.3:+1632112 None:intergenic
TAAACTCGATCTTACTGATT+AGG 0.399672 7.3:+1633840 None:intergenic
AGGGTTCTTGTAACGGGAAC+AGG 0.401037 7.3:-1632218 MS.gene050585:CDS
TGATCAAGTCCTGGAATCTA+TGG 0.409147 7.3:+1631356 None:intergenic
AATGCATTAAGGTCTCTGTT+TGG 0.414420 7.3:+1631486 None:intergenic
TATCCAAGTCATAGACCTAC+TGG 0.422107 7.3:-1633893 MS.gene050585:CDS
CTATCATGGCCATAGATTCC+AGG 0.439615 7.3:-1631365 MS.gene050585:CDS
CATAGTCAACCAAATCCTTA+GGG 0.439621 7.3:-1631424 MS.gene050585:CDS
TCGATCTTACTGATTAGGTC+AGG 0.448058 7.3:+1633845 None:intergenic
CTTGGATAATCAATGCCATA+TGG 0.455345 7.3:+1633908 None:intergenic
CGAGCTGACAATTATCCATA+TGG 0.459790 7.3:-1633923 MS.gene050585:CDS
CAAGGGCCATACAATGGACT+TGG 0.462397 7.3:-1631537 MS.gene050585:CDS
CATGATAGTGCTGAGATTCA+TGG 0.463618 7.3:+1631380 None:intergenic
ATAATTACAGGTTTGGAGCT+TGG 0.464789 7.3:-1633599 MS.gene050585:intron
TCTGTTTGGGCACAAGTTTG+AGG 0.464929 7.3:+1631500 None:intergenic
TACACTTACAAATTGGAATC+CGG 0.470329 7.3:+1633475 None:intergenic
CCTGAGAACTTTGCGGTACT+CGG 0.472091 7.3:+1633086 None:intergenic
TGTGTAATGATAAGCTTGGT+TGG 0.476386 7.3:-1634034 MS.gene050585:CDS
GTAACGGGAACAGGACCAAT+GGG 0.482203 7.3:-1632209 MS.gene050585:CDS
AATTCCAGCGGATGCAAAGT+TGG 0.482632 7.3:+1633514 None:intergenic
ATGATAGTGCTGAGATTCAT+GGG 0.483606 7.3:+1631381 None:intergenic
GCTCGTAGGGTTCTTGTAAC+GGG 0.485539 7.3:-1632224 MS.gene050585:CDS
GGTGCCAACTTTGCATCCGC+TGG 0.492344 7.3:-1633518 MS.gene050585:CDS
TTTGGGCACAAGTTTGAGGC+TGG 0.492795 7.3:+1631504 None:intergenic
TGCATTCCATCCATCTGAAA+AGG 0.500058 7.3:-1631457 MS.gene050585:CDS
TCTGCTGGTGCACACCCCAT+TGG 0.500748 7.3:+1632194 None:intergenic
ATTGGAATTCTCAATGATAC+CGG 0.501740 7.3:-1633494 MS.gene050585:CDS
TTATGATTTGGGAGCTCGTA+GGG 0.504927 7.3:-1632237 MS.gene050585:CDS
CATGAATCTCAGCACTATCA+TGG 0.506866 7.3:-1631379 MS.gene050585:CDS
AGATCACTAAACCAAGAGAT+TGG 0.506960 7.3:-1632080 MS.gene050585:CDS
CATATGGATAATTGTCAGCT+CGG 0.514994 7.3:+1633924 None:intergenic
TGTACTGAGCACTGCCCCTA+AGG 0.518112 7.3:+1631409 None:intergenic
CGCCCAGTAGGTCTATGACT+TGG 0.519853 7.3:+1633890 None:intergenic
CAAAGCCCAAGTCCATTGTA+TGG 0.523043 7.3:+1631531 None:intergenic
CCTCTCATAGCTAATTCTGC+TGG 0.523864 7.3:+1632179 None:intergenic
AGATGTCAGAGCCAATCTCT+TGG 0.524884 7.3:+1632069 None:intergenic
AAGGTAGCATGCTGTGGACA+AGG 0.527586 7.3:-1631555 MS.gene050585:CDS
AATATACCCTGAGAACTTTG+CGG 0.527998 7.3:+1633079 None:intergenic
GTACGAGTGCTCTGTTGACT+AGG 0.528446 7.3:+1633214 None:intergenic
AGCTCGTAGGGTTCTTGTAA+CGG 0.529952 7.3:-1632225 MS.gene050585:CDS
AGCTTCTCTCCAACTAGTAG+TGG 0.531230 7.3:+1633548 None:intergenic
TACTTGAGCCCACTACTAGT+TGG 0.537722 7.3:-1633557 MS.gene050585:CDS
GCTATGAGAGGAGGTCCAAA+TGG 0.539638 7.3:-1632167 MS.gene050585:CDS
CAATGACTTTCTTGCTACCA+CGG 0.544419 7.3:-1633948 MS.gene050585:CDS
GACAGGATTTGCAACATCAA+AGG 0.548688 7.3:-1631574 MS.gene050585:intron
ATATGGATAATTGTCAGCTC+GGG 0.550623 7.3:+1633925 None:intergenic
CTCGTACTCATCACTCTTGG+TGG 0.556248 7.3:-1633198 MS.gene050585:CDS
TTAGAATCTACAAGCAGCTA+AGG 0.560190 7.3:-1633296 MS.gene050585:CDS
TGAGATAACGAACATAATCT+GGG 0.566580 7.3:+1633112 None:intergenic
CTGATCATGTCAACAAGTTG+AGG 0.566861 7.3:+1632101 None:intergenic
GGGCTCAAGTATGGAAGTGT+AGG 0.570268 7.3:+1633569 None:intergenic
AAGGAAGGATGATCAAGTCC+TGG 0.571193 7.3:+1631347 None:intergenic
TGTAACGGGAACAGGACCAA+TGG 0.575654 7.3:-1632210 MS.gene050585:CDS
GCACTCGTACTCATCACTCT+TGG 0.579889 7.3:-1633201 MS.gene050585:CDS
TTTATGATTTGGGAGCTCGT+AGG 0.582685 7.3:-1632238 MS.gene050585:CDS
CCATTAGAGAAACGCCCAGT+AGG 0.583236 7.3:+1633878 None:intergenic
CGAGTACCGCAAAGTTCTCA+GGG 0.585443 7.3:-1633085 MS.gene050585:intron
CGATCTTACTGATTAGGTCA+GGG 0.586893 7.3:+1633846 None:intergenic
AAGTGCACACATTGGTTCAG+AGG 0.601118 7.3:-1633247 MS.gene050585:CDS
AGTACATACCATAAGCTTGA+GGG 0.609717 7.3:+1632000 None:intergenic
GCTTCTCTCCAACTAGTAGT+GGG 0.615075 7.3:+1633549 None:intergenic
ATAATTGTCAGCTCGGGCCG+TGG 0.619651 7.3:+1633931 None:intergenic
GGAGATTCTTTAGTGGACAG+TGG 0.621933 7.3:-1633974 MS.gene050585:CDS
CCAGCAGAATTAGCTATGAG+AGG 0.625424 7.3:-1632179 MS.gene050585:CDS
AGTGCACACATTGGTTCAGA+GGG 0.625538 7.3:-1633246 MS.gene050585:CDS
ACATCAAAGGTAGCATGCTG+TGG 0.627775 7.3:-1631561 MS.gene050585:CDS
GCAGAATTAGCTATGAGAGG+AGG 0.629341 7.3:-1632176 MS.gene050585:CDS
AAGGGCCATACAATGGACTT+GGG 0.633513 7.3:-1631536 MS.gene050585:CDS
AGGTAGCATGCTGTGGACAA+GGG 0.634327 7.3:-1631554 MS.gene050585:CDS
CAGTACATACCATAAGCTTG+AGG 0.636538 7.3:+1631999 None:intergenic
ATTGAGAATTCCAATTCCAG+CGG 0.659069 7.3:+1633502 None:intergenic
ATCCAAGTCATAGACCTACT+GGG 0.664548 7.3:-1633892 MS.gene050585:CDS
TGTGGACAAGGGCCATACAA+TGG 0.673219 7.3:-1631543 MS.gene050585:CDS
AAAAGAGTAAGTGCACACAT+TGG 0.674961 7.3:-1633255 MS.gene050585:CDS
CATACCATAAGCTTGAGGGT+TGG 0.678937 7.3:+1632004 None:intergenic
ATAGTCAACCAAATCCTTAG+GGG 0.684471 7.3:-1631423 MS.gene050585:CDS
TGATGCATATAGAATGCACA+TGG 0.719610 7.3:-1632036 MS.gene050585:CDS
TGATAGTGCTGAGATTCATG+GGG 0.720692 7.3:+1631382 None:intergenic
TAACGGGAACAGGACCAATG+GGG 0.735769 7.3:-1632208 MS.gene050585:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAATAAATTTAGCAT+TGG - chr7.3:1633503-1633522 MS.gene050585:CDS 10.0%
!! AATTTAAATATAGTGATAAT+TGG + chr7.3:1632387-1632406 None:intergenic 10.0%
!! AGGATATTTAATAATTAATA+TGG - chr7.3:1632462-1632481 MS.gene050585:intron 10.0%
!! TACTAAACTATTAAATTATT+GGG - chr7.3:1632698-1632717 MS.gene050585:intron 10.0%
!! AATAATTTAGGAAAATTCTA+TGG + chr7.3:1633133-1633152 None:intergenic 15.0%
!! GTACTAAACTATTAAATTAT+TGG - chr7.3:1632697-1632716 MS.gene050585:intron 15.0%
!! TAAAAAAGTTTATGCTAAAT+TGG - chr7.3:1632036-1632055 MS.gene050585:CDS 15.0%
!! TCTAATATTTGTATAATTAC+AGG - chr7.3:1631809-1631828 MS.gene050585:intron 15.0%
!!! ATAATTTTGAATAAGTCTAT+AGG + chr7.3:1633462-1633481 None:intergenic 15.0%
!! AAATATAGTGATAATTGGAT+TGG + chr7.3:1632382-1632401 None:intergenic 20.0%
!! AATTTAACCAACTATTGAAT+TGG - chr7.3:1633819-1633838 MS.gene050585:intron 20.0%
!! ATTTAACCAACTATTGAATT+GGG - chr7.3:1633820-1633839 MS.gene050585:intron 20.0%
!! GCAATATAGAGAAATAATTT+AGG + chr7.3:1633145-1633164 None:intergenic 20.0%
!! TAACATGTATGATGATTAAT+TGG - chr7.3:1632079-1632098 MS.gene050585:CDS 20.0%
!! TATTATAGTCACCATTAATT+TGG + chr7.3:1632018-1632037 None:intergenic 20.0%
!! TATTTGTATAATTACAGGTT+TGG - chr7.3:1631814-1631833 MS.gene050585:intron 20.0%
!! TTAATGTTACACTTACAAAT+TGG + chr7.3:1631955-1631974 None:intergenic 20.0%
!! TTTAATAATTAATATGGACG+TGG - chr7.3:1632468-1632487 MS.gene050585:intron 20.0%
!!! AAACTATAATCTCAAACTTT+TGG + chr7.3:1632441-1632460 None:intergenic 20.0%
!!! AAGTTTGAGATTATAGTTTA+AGG - chr7.3:1632442-1632461 MS.gene050585:intron 20.0%
!!! TTTAGTACTAGTTTAATTCA+TGG + chr7.3:1632685-1632704 None:intergenic 20.0%
!!! TTTTGTCAACAACTATTATT+TGG - chr7.3:1632251-1632270 MS.gene050585:intron 20.0%
! ATGTATGATGATTAATTGGT+TGG - chr7.3:1632083-1632102 MS.gene050585:CDS 25.0%
! CAATAGTTGGTTAAATTTGT+TGG + chr7.3:1633816-1633835 None:intergenic 25.0%
! CATTAATGTCACCAAATTAA+TGG - chr7.3:1632004-1632023 MS.gene050585:intron 25.0%
! TAAAAAAAACACTATCAGCT+AGG - chr7.3:1631613-1631632 MS.gene050585:intron 25.0%
! TAGCAACAAAAAATAGTGAT+TGG + chr7.3:1631728-1631747 None:intergenic 25.0%
! TTTCTGACTTTAATAAAGTC+TGG - chr7.3:1632646-1632665 MS.gene050585:intron 25.0%
!! AACTCATCTATGCATTTTTA+TGG + chr7.3:1633727-1633746 None:intergenic 25.0%
!! TACAGATACTATTTTATCGT+TGG - chr7.3:1632861-1632880 MS.gene050585:intron 25.0%
!! TTTTTGTGTAATGATAAGCT+TGG - chr7.3:1631382-1631401 MS.gene050585:CDS 25.0%
!!! AGTGTTTTTTTTAGTAGCAA+TGG + chr7.3:1631606-1631625 None:intergenic 25.0%
AATTCTCTCGTCACTAAATT+TGG + chr7.3:1631684-1631703 None:intergenic 30.0%
ATATTGCATAACATATGCAG+AGG - chr7.3:1633158-1633177 MS.gene050585:CDS 30.0%
ATGAGATAACGAACATAATC+TGG + chr7.3:1632312-1632331 None:intergenic 30.0%
ATTGGAATTCTCAATGATAC+CGG - chr7.3:1631926-1631945 MS.gene050585:intron 30.0%
GCTTGTAGATTCTAATGATA+TGG + chr7.3:1632119-1632138 None:intergenic 30.0%
TAAATTATTGGGAGCTTCTA+CGG - chr7.3:1632709-1632728 MS.gene050585:intron 30.0%
TACACTTACAAATTGGAATC+CGG + chr7.3:1631948-1631967 None:intergenic 30.0%
TCTTAAGTGTTACACTTTGT+GGG - chr7.3:1632926-1632945 MS.gene050585:intron 30.0%
TGAGATAACGAACATAATCT+GGG + chr7.3:1632311-1632330 None:intergenic 30.0%
TTAATAATGGCTGTTAGTAG+AGG - chr7.3:1632499-1632518 MS.gene050585:intron 30.0%
TTTGTGCAAAATGTGTTAGT+TGG - chr7.3:1632532-1632551 MS.gene050585:intron 30.0%
! AACAAGTTGAGGATTGTATA+AGG + chr7.3:1633311-1633330 None:intergenic 30.0%
! AATCTCAAACTTTTGGCAAT+TGG + chr7.3:1632434-1632453 None:intergenic 30.0%
! TAAACTCGATCTTACTGATT+AGG + chr7.3:1631583-1631602 None:intergenic 30.0%
! TGATGATTAATTGGTTGGTT+TGG - chr7.3:1632088-1632107 MS.gene050585:CDS 30.0%
!!! ATTTTGTTAGCCTTTTCAGA+TGG + chr7.3:1633976-1633995 None:intergenic 30.0%
!!! TGTTTTTGGAGATTCTTTAG+TGG - chr7.3:1631439-1631458 MS.gene050585:CDS 30.0%
AAAAGAGTAAGTGCACACAT+TGG - chr7.3:1632165-1632184 MS.gene050585:CDS 35.0%
AATATACCCTGAGAACTTTG+CGG + chr7.3:1632344-1632363 None:intergenic 35.0%
AATGCATTAAGGTCTCTGTT+TGG + chr7.3:1633937-1633956 None:intergenic 35.0%
AGATCACTAAACCAAGAGAT+TGG - chr7.3:1633340-1633359 MS.gene050585:intron 35.0%
AGTACATACCATAAGCTTGA+GGG + chr7.3:1633423-1633442 None:intergenic 35.0%
ATAGTCAACCAAATCCTTAG+GGG - chr7.3:1633997-1634016 MS.gene050585:CDS 35.0%
ATATGGATAATTGTCAGCTC+GGG + chr7.3:1631498-1631517 None:intergenic 35.0%
ATGCATCCCAAAATGCATTA+AGG + chr7.3:1633948-1633967 None:intergenic 35.0%
ATGCATTAAGGTCTCTGTTT+GGG + chr7.3:1633936-1633955 None:intergenic 35.0%
ATTGAGAATTCCAATTCCAG+CGG + chr7.3:1631921-1631940 None:intergenic 35.0%
CATAGTCAACCAAATCCTTA+GGG - chr7.3:1633996-1634015 MS.gene050585:CDS 35.0%
CATATGGATAATTGTCAGCT+CGG + chr7.3:1631499-1631518 None:intergenic 35.0%
CCAAAAACAAAGAAAGCTCT+TGG + chr7.3:1631428-1631447 None:intergenic 35.0%
CGTGGTTGCATGTTTAATAA+TGG - chr7.3:1632486-1632505 MS.gene050585:intron 35.0%
CTTAAGTGTTACACTTTGTG+GGG - chr7.3:1632927-1632946 MS.gene050585:intron 35.0%
CTTGGATAATCAATGCCATA+TGG + chr7.3:1631515-1631534 None:intergenic 35.0%
GATTCATACTCTTGTGTGTT+AGG - chr7.3:1633682-1633701 MS.gene050585:intron 35.0%
GTCTTAAGTGTTACACTTTG+TGG - chr7.3:1632925-1632944 MS.gene050585:intron 35.0%
TCATAGTCAACCAAATCCTT+AGG - chr7.3:1633995-1634014 MS.gene050585:CDS 35.0%
TCTATAGGAAGCTTGCAATA+TGG + chr7.3:1633447-1633466 None:intergenic 35.0%
TGATGCATATAGAATGCACA+TGG - chr7.3:1633384-1633403 MS.gene050585:intron 35.0%
TGCTATGTCTCATGTTTAGT+AGG - chr7.3:1633747-1633766 MS.gene050585:intron 35.0%
TGTGTAATGATAAGCTTGGT+TGG - chr7.3:1631386-1631405 MS.gene050585:CDS 35.0%
TGTTACGCTTAAAACAAGGT+AGG - chr7.3:1632950-1632969 MS.gene050585:intron 35.0%
TTAGAATCTACAAGCAGCTA+AGG - chr7.3:1632124-1632143 MS.gene050585:CDS 35.0%
! ACAGAGACCTTAATGCATTT+TGG - chr7.3:1633938-1633957 MS.gene050585:CDS 35.0%
! ATAATTACAGGTTTGGAGCT+TGG - chr7.3:1631821-1631840 MS.gene050585:intron 35.0%
! ATGATAGTGCTGAGATTCAT+GGG + chr7.3:1634042-1634061 None:intergenic 35.0%
! ATGCAGAGGCTTTATGATTT+GGG - chr7.3:1633172-1633191 MS.gene050585:CDS 35.0%
! CAGAGACCTTAATGCATTTT+GGG - chr7.3:1633939-1633958 MS.gene050585:CDS 35.0%
! TAATTACAGGTTTGGAGCTT+GGG - chr7.3:1631822-1631841 MS.gene050585:intron 35.0%
! TATGCAGAGGCTTTATGATT+TGG - chr7.3:1633171-1633190 MS.gene050585:CDS 35.0%
!! CAAAATGTGTTAGTTGGTGA+GGG - chr7.3:1632538-1632557 MS.gene050585:intron 35.0%
!!! CCAAGAGCTTTCTTTGTTTT+TGG - chr7.3:1631425-1631444 MS.gene050585:CDS 35.0%
ACACCTCACTGTTTGTACAA+TGG + chr7.3:1633047-1633066 None:intergenic 40.0%
ACTATTGAATTGGGCTTGAC+AGG - chr7.3:1633829-1633848 MS.gene050585:intron 40.0%
ATCCAAGTCATAGACCTACT+GGG - chr7.3:1631528-1631547 MS.gene050585:CDS 40.0%
ATGCCATTGTACAAACAGTG+AGG - chr7.3:1633041-1633060 MS.gene050585:intron 40.0%
ATGTTGCAAGCATTACTGGA+TGG + chr7.3:1632833-1632852 None:intergenic 40.0%
ATTACCAACCCTCAAGCTTA+TGG - chr7.3:1633412-1633431 MS.gene050585:intron 40.0%
CAAGATGTTGCAAGCATTAC+TGG + chr7.3:1632837-1632856 None:intergenic 40.0%
CAATGACTTTCTTGCTACCA+CGG - chr7.3:1631472-1631491 MS.gene050585:CDS 40.0%
CAGTAATGCTTGCAACATCT+TGG - chr7.3:1632835-1632854 MS.gene050585:intron 40.0%
CAGTACATACCATAAGCTTG+AGG + chr7.3:1633424-1633443 None:intergenic 40.0%
CATGAATCTCAGCACTATCA+TGG - chr7.3:1634041-1634060 MS.gene050585:CDS 40.0%
CGAGCTGACAATTATCCATA+TGG - chr7.3:1631497-1631516 MS.gene050585:CDS 40.0%
CTGATCATGTCAACAAGTTG+AGG + chr7.3:1633322-1633341 None:intergenic 40.0%
GACAGGATTTGCAACATCAA+AGG - chr7.3:1633846-1633865 MS.gene050585:intron 40.0%
GTCAAGCCCAATTCAATAGT+TGG + chr7.3:1633829-1633848 None:intergenic 40.0%
GTTGGAGAGAAGCTTCTAAT+TGG - chr7.3:1631881-1631900 MS.gene050585:intron 40.0%
TATCCAAGTCATAGACCTAC+TGG - chr7.3:1631527-1631546 MS.gene050585:CDS 40.0%
TGACGAGATCTTGCTGAAAA+AGG + chr7.3:1632279-1632298 None:intergenic 40.0%
TGCATTCCATCCATCTGAAA+AGG - chr7.3:1633963-1633982 MS.gene050585:CDS 40.0%
! CATGATAGTGCTGAGATTCA+TGG + chr7.3:1634043-1634062 None:intergenic 40.0%
! CGATCTTACTGATTAGGTCA+GGG + chr7.3:1631577-1631596 None:intergenic 40.0%
! GCAAAATGTGTTAGTTGGTG+AGG - chr7.3:1632537-1632556 MS.gene050585:intron 40.0%
! TCGATCTTACTGATTAGGTC+AGG + chr7.3:1631578-1631597 None:intergenic 40.0%
! TGATAGTGCTGAGATTCATG+GGG + chr7.3:1634041-1634060 None:intergenic 40.0%
! TTATGATTTGGGAGCTCGTA+GGG - chr7.3:1633183-1633202 MS.gene050585:CDS 40.0%
! TTTATGATTTGGGAGCTCGT+AGG - chr7.3:1633182-1633201 MS.gene050585:CDS 40.0%
!!! TGTTAGCCTTTTCAGATGGA+TGG + chr7.3:1633972-1633991 None:intergenic 40.0%
AACTTTGCATCCGCTGGAAT+TGG - chr7.3:1631908-1631927 MS.gene050585:intron 45.0%
AATTCCAGCGGATGCAAAGT+TGG + chr7.3:1631909-1631928 None:intergenic 45.0%
ACATCAAAGGTAGCATGCTG+TGG - chr7.3:1633859-1633878 MS.gene050585:CDS 45.0%
AGATGTCAGAGCCAATCTCT+TGG + chr7.3:1633354-1633373 None:intergenic 45.0%
AGCTCGTAGGGTTCTTGTAA+CGG - chr7.3:1633195-1633214 MS.gene050585:CDS 45.0%
AGCTTCTCTCCAACTAGTAG+TGG + chr7.3:1631875-1631894 None:intergenic 45.0%
CAAAGCCCAAGTCCATTGTA+TGG + chr7.3:1633892-1633911 None:intergenic 45.0%
CATACCATAAGCTTGAGGGT+TGG + chr7.3:1633419-1633438 None:intergenic 45.0%
CCAGCAGAATTAGCTATGAG+AGG - chr7.3:1633241-1633260 MS.gene050585:CDS 45.0%
CCTCTCATAGCTAATTCTGC+TGG + chr7.3:1633244-1633263 None:intergenic 45.0%
CTATCATGGCCATAGATTCC+AGG - chr7.3:1634055-1634074 MS.gene050585:CDS 45.0%
GCAGAATTAGCTATGAGAGG+AGG - chr7.3:1633244-1633263 MS.gene050585:CDS 45.0%
GCTTCTCTCCAACTAGTAGT+GGG + chr7.3:1631874-1631893 None:intergenic 45.0%
TACTTGAGCCCACTACTAGT+TGG - chr7.3:1631863-1631882 MS.gene050585:intron 45.0%
TCTGTTTGGGCACAAGTTTG+AGG + chr7.3:1633923-1633942 None:intergenic 45.0%
! AAGGGCCATACAATGGACTT+GGG - chr7.3:1633884-1633903 MS.gene050585:CDS 45.0%
! GGAGATTCTTTAGTGGACAG+TGG - chr7.3:1631446-1631465 MS.gene050585:CDS 45.0%
! GGGGTGTTACGCTTAAAACA+AGG - chr7.3:1632946-1632965 MS.gene050585:intron 45.0%
!! AAGTGCACACATTGGTTCAG+AGG - chr7.3:1632173-1632192 MS.gene050585:CDS 45.0%
!! ACTAGTAGTGGGCTCAAGTA+TGG + chr7.3:1631863-1631882 None:intergenic 45.0%
!! AGTGCACACATTGGTTCAGA+GGG - chr7.3:1632174-1632193 MS.gene050585:CDS 45.0%
AAGGTAGCATGCTGTGGACA+AGG - chr7.3:1633865-1633884 MS.gene050585:CDS 50.0%
AGGTAGCATGCTGTGGACAA+GGG - chr7.3:1633866-1633885 MS.gene050585:CDS 50.0%
CCATTAGAGAAACGCCCAGT+AGG + chr7.3:1631545-1631564 None:intergenic 50.0%
CCTACTGGGCGTTTCTCTAA+TGG - chr7.3:1631542-1631561 MS.gene050585:CDS 50.0%
CCTGAGAACTTTGCGGTACT+CGG + chr7.3:1632337-1632356 None:intergenic 50.0%
CTCGTACTCATCACTCTTGG+TGG - chr7.3:1632222-1632241 MS.gene050585:CDS 50.0%
GCACTCGTACTCATCACTCT+TGG - chr7.3:1632219-1632238 MS.gene050585:CDS 50.0%
GCTATGAGAGGAGGTCCAAA+TGG - chr7.3:1633253-1633272 MS.gene050585:CDS 50.0%
GCTCGTAGGGTTCTTGTAAC+GGG - chr7.3:1633196-1633215 MS.gene050585:CDS 50.0%
TAACGGGAACAGGACCAATG+GGG - chr7.3:1633212-1633231 MS.gene050585:CDS 50.0%
TCGACGCTACACTGACCATT+TGG + chr7.3:1633271-1633290 None:intergenic 50.0%
TGTGGACAAGGGCCATACAA+TGG - chr7.3:1633877-1633896 MS.gene050585:CDS 50.0%
! AGGGTTCTTGTAACGGGAAC+AGG - chr7.3:1633202-1633221 MS.gene050585:CDS 50.0%
! CAAGGGCCATACAATGGACT+TGG - chr7.3:1633883-1633902 MS.gene050585:CDS 50.0%
! CGAGTACCGCAAAGTTCTCA+GGG - chr7.3:1632335-1632354 MS.gene050585:intron 50.0%
! GGGCTCAAGTATGGAAGTGT+AGG + chr7.3:1631854-1631873 None:intergenic 50.0%
! GTAACGGGAACAGGACCAAT+GGG - chr7.3:1633211-1633230 MS.gene050585:CDS 50.0%
! GTACGAGTGCTCTGTTGACT+AGG + chr7.3:1632209-1632228 None:intergenic 50.0%
! TGTAACGGGAACAGGACCAA+TGG - chr7.3:1633210-1633229 MS.gene050585:CDS 50.0%
! TTTGGGCACAAGTTTGAGGC+TGG + chr7.3:1633919-1633938 None:intergenic 50.0%
ATAATTGTCAGCTCGGGCCG+TGG + chr7.3:1631492-1631511 None:intergenic 55.0%
CGCCCAGTAGGTCTATGACT+TGG + chr7.3:1631533-1631552 None:intergenic 55.0%
! CCGAGTACCGCAAAGTTCTC+AGG - chr7.3:1632334-1632353 MS.gene050585:intron 55.0%
! GAGCACTGCCCCTAAGGATT+TGG + chr7.3:1634008-1634027 None:intergenic 55.0%
! TGTACTGAGCACTGCCCCTA+AGG + chr7.3:1634014-1634033 None:intergenic 55.0%
GGTGCCAACTTTGCATCCGC+TGG - chr7.3:1631902-1631921 MS.gene050585:intron 60.0%
TCTGCTGGTGCACACCCCAT+TGG + chr7.3:1633229-1633248 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 1631359 1634083 1631359 ID=MS.gene050585
chr7.3 mRNA 1631359 1634083 1631359 ID=MS.gene050585.t1;Parent=MS.gene050585
chr7.3 exon 1633855 1634083 1633855 ID=MS.gene050585.t1.exon1;Parent=MS.gene050585.t1
chr7.3 CDS 1633855 1634083 1633855 ID=cds.MS.gene050585.t1;Parent=MS.gene050585.t1
chr7.3 exon 1633484 1633611 1633484 ID=MS.gene050585.t1.exon2;Parent=MS.gene050585.t1
chr7.3 CDS 1633484 1633611 1633484 ID=cds.MS.gene050585.t1;Parent=MS.gene050585.t1
chr7.3 exon 1633086 1633328 1633086 ID=MS.gene050585.t1.exon3;Parent=MS.gene050585.t1
chr7.3 CDS 1633086 1633328 1633086 ID=cds.MS.gene050585.t1;Parent=MS.gene050585.t1
chr7.3 exon 1632009 1632264 1632009 ID=MS.gene050585.t1.exon4;Parent=MS.gene050585.t1
chr7.3 CDS 1632009 1632264 1632009 ID=cds.MS.gene050585.t1;Parent=MS.gene050585.t1
chr7.3 exon 1631359 1631591 1631359 ID=MS.gene050585.t1.exon5;Parent=MS.gene050585.t1
chr7.3 CDS 1631359 1631591 1631359 ID=cds.MS.gene050585.t1;Parent=MS.gene050585.t1
Gene Sequence

>MS.gene050585

ATGGCTACTTCTTTGGTGATTGCTTTTTGTGTAATGATAAGCTTGGTTGGTTGTGCTTATGCTCAACCAAGAGCTTTCTTTGTTTTTGGAGATTCTTTAGTGGACAGTGGTAACAATGACTTTCTTGCTACCACGGCCCGAGCTGACAATTATCCATATGGCATTGATTATCCAAGTCATAGACCTACTGGGCGTTTCTCTAATGGCTACAATATCCCTGACCTAATCAGTAAGATCGAGTTTACCATTGCTACTAAAAAAAACACTATCAGCTAGGAAAATTTAGAAAGAGAAAACATAAAATATTTCTCTAAATTAGTCACCAAATTTAGTGACGAGAGAATTAGCGAGAAAATTTAATTTTTTCCAATCACTATTTTTTGTTGCTAATTTATTTTTCTAGTATATATTTTAATATAATTCAACATATTTTGACTAATCATACTTGTTTCTAATATTTGTATAATTACAGGTTTGGAGCTTGGGTTAGAGCCTACACTTCCATACTTGAGCCCACTACTAGTTGGAGAGAAGCTTCTAATTGGTGCCAACTTTGCATCCGCTGGAATTGGAATTCTCAATGATACCGGATTCCAATTTGTAAGTGTAACATTAAACTATTAGTAGTAATTCAAATTGTTAAAACATTAATGTCACCAAATTAATGGTGACTATAATAAAAAAGTTTATGCTAAATTGGTAGTAGTAACATATTAATATTAACATGTATGATGATTAATTGGTTGGTTTGGCAGATCCATATCATTAGAATCTACAAGCAGCTAAGGCTATTTGAATTGTATCAGAAAAGAGTAAGTGCACACATTGGTTCAGAGGGAGCAAGAAACCTAGTCAACAGAGCACTCGTACTCATCACTCTTGGTGGCAATGATTTTGTCAACAACTATTATTTGGTTCCTTTTTCAGCAAGATCTCGTCAATTTTCTCTCCCAGATTATGTTCGTTATCTCATTTCCGAGTACCGCAAAGTTCTCAGGGTATATTATTCTTCATTTTGTACCAATCCAATTATCACTATATTTAAATTTCACTTATGTTCTCTGTCACATAACCAATTGCCAAAAGTTTGAGATTATAGTTTAAGGATATTTAATAATTAATATGGACGTGGTTGCATGTTTAATAATGGCTGTTAGTAGAGGAGTGAATGTGTTTGTGCAAAATGTGTTAGTTGGTGAGGGATAATTAACAACTTAATTTGTGTGTCACTTTCAAACATGTATAGTATTATCATTAAAAAAACATGTCTAGTATTATTTAATGCAGTTTCTGACTTTAATAAAGTCTGGTCAATGTTATCGTCCATGAATTAAACTAGTACTAAACTATTAAATTATTGGGAGCTTCTACGGTGCAGTCAGTAAACTGACTTTTTTGAAAAAGTTAATTTTGATCTTAATATTTGATTCATTTTTAAATTGTTGATTACTGATTAATGATCAATAGTAATCCATCCAGTAATGCTTGCAACATCTTGGACTTACAGATACTATTTTATCGTTGGAATATTTAACATGCAAACATAGTTGATGATATTATGTGATAGTCTTAAGTGTTACACTTTGTGGGGTGTTACGCTTAAAACAAGGTAGGATAAAATTAGATTAAGTGTAGTCTTGTTAATCTAATAAATTGATGATGCTATGATGACTGAACTTTTGATGCCATTGTACAAACAGTGAGGTGTTACTTACTAAATTTTTTATGTTATAGTATTAACTTCACTAGAAAAGTCATTCTCATGACTTCACCATAGAATTTTCCTAAATTATTTCTCTATATTGCATAACATATGCAGAGGCTTTATGATTTGGGAGCTCGTAGGGTTCTTGTAACGGGAACAGGACCAATGGGGTGTGCACCAGCAGAATTAGCTATGAGAGGAGGTCCAAATGGTCAGTGTAGCGTCGAACTTGAGAGAGCTGCATCCTTATACAATCCTCAACTTGTTGACATGATCAGATCACTAAACCAAGAGATTGGCTCTGACATCTTCGTTGCTGCTGATGCATATAGAATGCACATGGATTACATTACCAACCCTCAAGCTTATGGTATGTACTGCCATATTGCAAGCTTCCTATAGACTTATTCAAAATTATTTAGTAGTATATACTTTTCGAAAAATAAATAAATTTAGCATTGGTATATGTAGACACATTTTTAAGAATACTATAATCAGTCATATTAAATTTTTATTACATGTTGCTGATAAAACAAGTTGAATTATCAACATAAAATTGATGCTTTATACACTCAAAAATCAGCAATGCAGCTATCAATTTCTTTTAGAAATTGAGAAGATTCATACTCTTGTGTGTTAGGTTGATGCTTTGTATTTATGCCATAAAAATGCATAGATGAGTTTGCTATGTCTCATGTTTAGTAGGACATATGTTTGATGAGATTCATAAACGTTCTGTTTGACTTTGACCAACAAATTTAACCAACTATTGAATTGGGCTTGACAGGATTTGCAACATCAAAGGTAGCATGCTGTGGACAAGGGCCATACAATGGACTTGGGCTTTGTACACCAGCCTCAAACTTGTGCCCAAACAGAGACCTTAATGCATTTTGGGATGCATTCCATCCATCTGAAAAGGCTAACAAAATCATAGTCAACCAAATCCTTAGGGGCAGTGCTCAGTACATGTACCCCATGAATCTCAGCACTATCATGGCCATAGATTCCAGGACTTGA

Protein sequence

>MS.gene050585.t1

MATSLVIAFCVMISLVGCAYAQPRAFFVFGDSLVDSGNNDFLATTARADNYPYGIDYPSHRPTGRFSNGYNIPDLISLELGLEPTLPYLSPLLVGEKLLIGANFASAGIGILNDTGFQFIHIIRIYKQLRLFELYQKRVSAHIGSEGARNLVNRALVLITLGGNDFVNNYYLVPFSARSRQFSLPDYVRYLISEYRKVLRRLYDLGARRVLVTGTGPMGCAPAELAMRGGPNGQCSVELERAASLYNPQLVDMIRSLNQEIGSDIFVAADAYRMHMDYITNPQAYGFATSKVACCGQGPYNGLGLCTPASNLCPNRDLNAFWDAFHPSEKANKIIVNQILRGSAQYMYPMNLSTIMAIDSRT