Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065013.t1 | XP_024628090.1 | 94.7 | 322 | 17 | 0 | 1 | 322 | 1 | 322 | 1.60E-176 | 628.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065013.t1 | Q9FLC2 | 52.2 | 322 | 147 | 2 | 1 | 322 | 1 | 315 | 1.4e-91 | 337.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065013.t1 | A0A396JYI3 | 94.7 | 322 | 17 | 0 | 1 | 322 | 1 | 322 | 1.2e-176 | 628.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056299 | MS.gene065013 | 0.942324 | 8.79E-102 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065013.t1 | MTR_1g112780 | 94.839 | 310 | 16 | 0 | 13 | 322 | 401 | 710 | 0.0 | 592 |
| MS.gene065013.t1 | MTR_1g112780 | 77.603 | 317 | 67 | 2 | 6 | 322 | 9 | 321 | 1.01e-178 | 515 |
| MS.gene065013.t1 | MTR_1g112740 | 89.623 | 318 | 30 | 1 | 5 | 322 | 1 | 315 | 0.0 | 577 |
| MS.gene065013.t1 | MTR_1g090667 | 81.734 | 323 | 58 | 1 | 1 | 322 | 1 | 323 | 0.0 | 536 |
| MS.gene065013.t1 | MTR_1g112750 | 80.495 | 323 | 59 | 2 | 1 | 322 | 1 | 320 | 0.0 | 512 |
| MS.gene065013.t1 | MTR_5g013260 | 42.236 | 322 | 180 | 4 | 4 | 324 | 41 | 357 | 1.93e-80 | 252 |
| MS.gene065013.t1 | MTR_5g013250 | 40.557 | 323 | 186 | 4 | 3 | 324 | 36 | 353 | 1.49e-79 | 249 |
| MS.gene065013.t1 | MTR_4g035655 | 39.583 | 336 | 187 | 8 | 6 | 334 | 481 | 807 | 6.90e-67 | 226 |
| MS.gene065013.t1 | MTR_4g035655 | 38.348 | 339 | 197 | 6 | 1 | 334 | 1 | 332 | 8.17e-66 | 223 |
| MS.gene065013.t1 | MTR_5g017350 | 26.822 | 343 | 215 | 12 | 9 | 332 | 78 | 403 | 1.38e-15 | 77.8 |
| MS.gene065013.t1 | MTR_5g017350 | 26.822 | 343 | 215 | 12 | 9 | 332 | 78 | 403 | 1.51e-15 | 77.8 |
| MS.gene065013.t1 | MTR_5g017350 | 26.822 | 343 | 215 | 12 | 9 | 332 | 78 | 403 | 2.23e-15 | 77.4 |
| MS.gene065013.t1 | MTR_5g017350 | 26.822 | 343 | 215 | 12 | 9 | 332 | 78 | 403 | 2.95e-15 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065013.t1 | AT5G05320 | 52.174 | 322 | 147 | 2 | 1 | 322 | 1 | 315 | 3.45e-114 | 337 |
| MS.gene065013.t1 | AT4G38540 | 51.863 | 322 | 149 | 2 | 1 | 322 | 1 | 316 | 1.09e-105 | 315 |
| MS.gene065013.t1 | AT2G35660 | 41.875 | 320 | 180 | 4 | 6 | 324 | 44 | 358 | 1.15e-77 | 244 |
| MS.gene065013.t1 | AT2G29720 | 40.584 | 308 | 177 | 4 | 19 | 325 | 55 | 357 | 6.78e-72 | 229 |
| MS.gene065013.t1 | AT4G15760 | 35.783 | 313 | 192 | 3 | 17 | 322 | 39 | 349 | 1.33e-58 | 195 |
| MS.gene065013.t1 | AT4G15760 | 36.364 | 308 | 185 | 3 | 17 | 322 | 39 | 337 | 1.61e-58 | 194 |
| MS.gene065013.t1 | AT2G35660 | 39.419 | 241 | 141 | 3 | 85 | 324 | 8 | 244 | 2.43e-51 | 173 |
| MS.gene065013.t1 | AT2G35660 | 39.419 | 241 | 141 | 3 | 85 | 324 | 8 | 244 | 2.43e-51 | 173 |
| MS.gene065013.t1 | AT4G15765 | 31.683 | 303 | 163 | 6 | 6 | 306 | 3 | 263 | 4.77e-39 | 139 |
| MS.gene065013.t1 | AT4G15765 | 28.261 | 184 | 131 | 1 | 123 | 306 | 8 | 190 | 9.37e-24 | 97.1 |
| MS.gene065013.t1 | AT4G15765 | 28.261 | 184 | 131 | 1 | 123 | 306 | 8 | 190 | 9.37e-24 | 97.1 |
| MS.gene065013.t1 | AT4G15765 | 28.261 | 184 | 131 | 1 | 123 | 306 | 8 | 190 | 9.37e-24 | 97.1 |
| MS.gene065013.t1 | AT4G15765 | 28.261 | 184 | 131 | 1 | 123 | 306 | 8 | 190 | 9.37e-24 | 97.1 |
| MS.gene065013.t1 | AT5G67030 | 26.286 | 350 | 224 | 11 | 2 | 331 | 72 | 407 | 3.45e-18 | 85.9 |
| MS.gene065013.t1 | AT5G67030 | 26.989 | 352 | 219 | 14 | 2 | 331 | 72 | 407 | 5.46e-18 | 85.5 |
Find 95 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTTCAGGGATAAAATTT+TGG | 0.116678 | 1.2:-83518280 | MS.gene065013:CDS |
| GTCAAAGGTTGTTGCTATTC+AGG | 0.183324 | 1.2:-83519319 | MS.gene065013:CDS |
| CAAAATTGGTTAACTTCTTC+AGG | 0.188159 | 1.2:-83518293 | MS.gene065013:CDS |
| TGTGACTACTTCTTTGGTTA+TGG | 0.241431 | 1.2:-83521176 | MS.gene065013:CDS |
| TCAGGAAAGTGGTTCAAAAT+TGG | 0.273076 | 1.2:-83518307 | MS.gene065013:intron |
| CAGGAATGTGACTACTTCTT+TGG | 0.280000 | 1.2:-83521182 | MS.gene065013:CDS |
| TCAGATAGTTTGAGATTTAG+TGG | 0.300612 | 1.2:-83521526 | MS.gene065013:CDS |
| ATGAAATGTTTAACATCATT+TGG | 0.309078 | 1.2:+83518660 | None:intergenic |
| TATTATTCACCTTGGTTGAT+AGG | 0.315579 | 1.2:+83519024 | None:intergenic |
| CAGATTGGGCATTGAAAGTT+TGG | 0.318004 | 1.2:-83521560 | MS.gene065013:CDS |
| AAAGGCAATGTTTGTGTTGC+TGG | 0.327124 | 1.2:-83518555 | MS.gene065013:CDS |
| ACATCCTTGGGAGCTAATAA+TGG | 0.330779 | 1.2:-83518589 | MS.gene065013:CDS |
| GTTGTTGCTATTCAGGAATC+TGG | 0.332949 | 1.2:-83519312 | MS.gene065013:CDS |
| GTGACTACTTCTTTGGTTAT+GGG | 0.339346 | 1.2:-83521175 | MS.gene065013:CDS |
| TGGCCAAGATCAGGCATCAT+AGG | 0.366278 | 1.2:+83518519 | None:intergenic |
| GTGATGACAAGGGTGTTTAT+TGG | 0.366836 | 1.2:-83519062 | MS.gene065013:CDS |
| ATTGTAGGAGCTGGAATTGC+TGG | 0.368049 | 1.2:-83522624 | MS.gene065013:CDS |
| CACCCTATGATGCCTGATCT+TGG | 0.380927 | 1.2:-83518522 | MS.gene065013:CDS |
| GCCCGTGAAGTTCGGTGTAT+TGG | 0.387505 | 1.2:-83519402 | MS.gene065013:CDS |
| ATCAAAACCAAGGTGTTGAT+TGG | 0.389792 | 1.2:-83519252 | MS.gene065013:CDS |
| AAAATACTACATCTTGTTGA+TGG | 0.405138 | 1.2:-83519282 | MS.gene065013:CDS |
| CACCAACATCTACAACTTCA+TGG | 0.407357 | 1.2:-83521433 | MS.gene065013:CDS |
| GTGGATTTGCTTTAACGGTA+TGG | 0.414647 | 1.2:-83521507 | MS.gene065013:CDS |
| TGCTGGCCTCACAACATCCT+TGG | 0.420337 | 1.2:-83522607 | MS.gene065013:CDS |
| CATCCTTGGGAGCTAATAAT+GGG | 0.433653 | 1.2:-83518588 | MS.gene065013:CDS |
| TTCAACGAAGCCTCATACAC+AGG | 0.443232 | 1.2:-83519189 | MS.gene065013:CDS |
| TGCATATCTCCCTGTGTATG+AGG | 0.452906 | 1.2:+83519179 | None:intergenic |
| ATTTAGTGGATTTGCTTTAA+CGG | 0.453496 | 1.2:-83521512 | MS.gene065013:CDS |
| AAAATTGGTTAACTTCTTCA+GGG | 0.455885 | 1.2:-83518292 | MS.gene065013:CDS |
| CCAATGTTCATGCAGTACTT+TGG | 0.458036 | 1.2:-83519114 | MS.gene065013:CDS |
| CATTGAGACATAGACATCCT+TGG | 0.463494 | 1.2:-83518602 | MS.gene065013:CDS |
| AACCTTTGACATGTACCTAA+TGG | 0.465605 | 1.2:+83519332 | None:intergenic |
| GCTGGCCTCACAACATCCTT+GGG | 0.467311 | 1.2:-83522606 | MS.gene065013:CDS |
| TGGATTTGCTTTAACGGTAT+GGG | 0.467915 | 1.2:-83521506 | MS.gene065013:CDS |
| CACCCTCCTTGGCCAAGATC+AGG | 0.471352 | 1.2:+83518510 | None:intergenic |
| GTTGTAGATGTTGGTGGCGG+AGG | 0.473299 | 1.2:+83521440 | None:intergenic |
| ATTGAGACATAGACATCCTT+GGG | 0.475914 | 1.2:-83518601 | MS.gene065013:CDS |
| TAACGGTATGGGAAAATGCT+TGG | 0.477745 | 1.2:-83521495 | MS.gene065013:CDS |
| AGCTTCCTAGTGGCACCATT+AGG | 0.478225 | 1.2:-83519347 | MS.gene065013:CDS |
| ATAGTGGAGCCCGTGAAGTT+CGG | 0.480346 | 1.2:-83519410 | MS.gene065013:intron |
| GGGTGTTGTGCATTAGAAGA+TGG | 0.480761 | 1.2:-83518492 | MS.gene065013:CDS |
| CTAATGCACAACACCCTCCT+TGG | 0.481132 | 1.2:+83518499 | None:intergenic |
| GGTGTTGTGCATTAGAAGAT+GGG | 0.481605 | 1.2:-83518491 | MS.gene065013:CDS |
| GATATTGTGATTGTAGGAGC+TGG | 0.482110 | 1.2:-83522633 | MS.gene065013:CDS |
| TCCAATACACCGAACTTCAC+GGG | 0.484120 | 1.2:+83519401 | None:intergenic |
| TTCCAATACACCGAACTTCA+CGG | 0.489913 | 1.2:+83519400 | None:intergenic |
| GTTGGTTCTATTCAGGAAAG+TGG | 0.496865 | 1.2:-83518318 | MS.gene065013:intron |
| CAAGGATGTCTATGTCTCAA+TGG | 0.503296 | 1.2:+83518603 | None:intergenic |
| TCAAAACCAAGGTGTTGATT+GGG | 0.505761 | 1.2:-83519251 | MS.gene065013:CDS |
| TTTCCCATTATTAGCTCCCA+AGG | 0.512250 | 1.2:+83518585 | None:intergenic |
| CAACATCCTTGGGACTTCAC+AGG | 0.512542 | 1.2:-83522596 | MS.gene065013:intron |
| TATTGGAAGAAATTTATTGT+TGG | 0.520538 | 1.2:-83519385 | MS.gene065013:CDS |
| CCAAAGTACTGCATGAACAT+TGG | 0.523201 | 1.2:+83519114 | None:intergenic |
| ATAATGGGAAATATTAGTAA+AGG | 0.530399 | 1.2:-83518573 | MS.gene065013:CDS |
| GCGTTGGATGTCGTTGGTGT+TGG | 0.533588 | 1.2:-83521469 | MS.gene065013:CDS |
| TGACTACTTCTTTGGTTATG+GGG | 0.537353 | 1.2:-83521174 | MS.gene065013:CDS |
| TTCATGCAGTACTTTGGCAA+AGG | 0.540273 | 1.2:-83519108 | MS.gene065013:CDS |
| TGGAAGGCGTTGGATGTCGT+TGG | 0.546019 | 1.2:-83521475 | MS.gene065013:CDS |
| GGCCAAGATCAGGCATCATA+GGG | 0.547689 | 1.2:+83518520 | None:intergenic |
| GGAAAATGCTTGGAAGGCGT+TGG | 0.549027 | 1.2:-83521485 | MS.gene065013:CDS |
| CACTAGGAAGCTCATTGGCA+AGG | 0.549520 | 1.2:+83519358 | None:intergenic |
| TTGTGCATTAGAAGATGGGG+TGG | 0.557089 | 1.2:-83518487 | MS.gene065013:CDS |
| ACCAACATCTACAACTTCAT+GGG | 0.560855 | 1.2:-83521432 | MS.gene065013:intron |
| GGTGCCACTAGGAAGCTCAT+TGG | 0.561305 | 1.2:+83519353 | None:intergenic |
| CACCATTAGGTACATGTCAA+AGG | 0.572299 | 1.2:-83519334 | MS.gene065013:CDS |
| TCTGTGGTGGCAAAGTGGCT+AGG | 0.577400 | 1.2:-83519213 | MS.gene065013:CDS |
| ATCACACCCAATCAACACCT+TGG | 0.578417 | 1.2:+83519245 | None:intergenic |
| ACTAGGAAGCTCATTGGCAA+GGG | 0.580582 | 1.2:+83519359 | None:intergenic |
| AAGGTGTTGATTGGGTGTGA+TGG | 0.594090 | 1.2:-83519243 | MS.gene065013:CDS |
| CATGAAGTTGTAGATGTTGG+TGG | 0.595074 | 1.2:+83521434 | None:intergenic |
| ATGATGCCTGATCTTGGCCA+AGG | 0.600478 | 1.2:-83518516 | MS.gene065013:CDS |
| TGCCTGATCTTGGCCAAGGA+GGG | 0.602300 | 1.2:-83518512 | MS.gene065013:CDS |
| TAAACACCCTTGTCATCACA+TGG | 0.608128 | 1.2:+83519066 | None:intergenic |
| ACCCATGAAGTTGTAGATGT+TGG | 0.609291 | 1.2:+83521431 | None:intergenic |
| GGTATGGGAAAATGCTTGGA+AGG | 0.611682 | 1.2:-83521491 | MS.gene065013:CDS |
| CACAGGGAGATATGCAACGA+GGG | 0.613113 | 1.2:-83519172 | MS.gene065013:CDS |
| GTGTTGTGCATTAGAAGATG+GGG | 0.626627 | 1.2:-83518490 | MS.gene065013:CDS |
| AGAGTACCTGTGAAGTCCCA+AGG | 0.634653 | 1.2:+83522590 | None:intergenic |
| ATGTACCTAATGGTGCCACT+AGG | 0.636331 | 1.2:+83519342 | None:intergenic |
| TAAACTCTGTGGTGGCAAAG+TGG | 0.638925 | 1.2:-83519218 | MS.gene065013:CDS |
| AGCTATTCCATGTGATGACA+AGG | 0.639989 | 1.2:-83519073 | MS.gene065013:CDS |
| CATTGGTTCAAGCTTGTGAG+TGG | 0.645311 | 1.2:+83519131 | None:intergenic |
| TCAACGAAGCCTCATACACA+GGG | 0.655710 | 1.2:-83519188 | MS.gene065013:CDS |
| CTTGCCAATGAGCTTCCTAG+TGG | 0.665321 | 1.2:-83519357 | MS.gene065013:CDS |
| GAAGTTGTAGATGTTGGTGG+CGG | 0.672083 | 1.2:+83521437 | None:intergenic |
| ATGCCTGATCTTGGCCAAGG+AGG | 0.673847 | 1.2:-83518513 | MS.gene065013:CDS |
| ACGTCTTTCATAGACAACAA+AGG | 0.684092 | 1.2:-83521136 | MS.gene065013:CDS |
| TGATGGAGTAAACTCTGTGG+TGG | 0.689773 | 1.2:-83519226 | MS.gene065013:CDS |
| TGGAACAACCATCAAAACCA+AGG | 0.703968 | 1.2:-83519262 | MS.gene065013:CDS |
| ACATGGACTCCTATCAACCA+AGG | 0.708027 | 1.2:-83519033 | MS.gene065013:intron |
| ACAGGGAGATATGCAACGAG+GGG | 0.719732 | 1.2:-83519171 | MS.gene065013:CDS |
| GTGTGATGGAGTAAACTCTG+TGG | 0.740999 | 1.2:-83519229 | MS.gene065013:CDS |
| GCTATTCCATGTGATGACAA+GGG | 0.761661 | 1.2:-83519072 | MS.gene065013:CDS |
| GAAGTCCCAAGGATGTTGTG+AGG | 0.766407 | 1.2:+83522601 | None:intergenic |
| ACACAGGGAGATATGCAACG+AGG | 0.767390 | 1.2:-83519173 | MS.gene065013:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAAATAATTGAAAAAATA+CGG | - | chr1.2:83520329-83520348 | MS.gene065013:intron | 10.0% |
| !! | TTAATGAAAAATAAAAATTC+TGG | + | chr1.2:83520866-83520885 | None:intergenic | 10.0% |
| !! | TTATAATTGATATTTATAGA+GGG | - | chr1.2:83518401-83518420 | MS.gene065013:intron | 10.0% |
| !! | TTTATAATTGATATTTATAG+AGG | - | chr1.2:83518400-83518419 | MS.gene065013:intron | 10.0% |
| !!! | CATTTTTATAAGTATTATTA+AGG | + | chr1.2:83518699-83518718 | None:intergenic | 10.0% |
| !!! | CTAATTAATTTTAAATAGAA+GGG | - | chr1.2:83518515-83518534 | MS.gene065013:CDS | 10.0% |
| !!! | GATTTTCATTTATATAAATA+TGG | + | chr1.2:83518837-83518856 | None:intergenic | 10.0% |
| !!! | TAATTTGATTTTTAAAACAT+TGG | + | chr1.2:83521964-83521983 | None:intergenic | 10.0% |
| !!! | TCTAATTAATTTTAAATAGA+AGG | - | chr1.2:83518514-83518533 | MS.gene065013:CDS | 10.0% |
| !!! | TTAAAAATTTTGAAAATATC+TGG | - | chr1.2:83520449-83520468 | MS.gene065013:intron | 10.0% |
| !!! | TTTTCATTTATATAAATATG+GGG | + | chr1.2:83518835-83518854 | None:intergenic | 10.0% |
| !! | AAAAAAATTGAAAACAATTC+TGG | - | chr1.2:83520232-83520251 | MS.gene065013:intron | 15.0% |
| !! | ATTGAAAAAATTGAAAATTC+TGG | - | chr1.2:83520498-83520517 | MS.gene065013:intron | 15.0% |
| !! | TCTGAAAAAAATAAAAATTC+TGG | + | chr1.2:83520910-83520929 | None:intergenic | 15.0% |
| !! | TCTGAAAAAATAAAATAATC+TGG | + | chr1.2:83520966-83520985 | None:intergenic | 15.0% |
| !! | TTTCATTTATATAAATATGG+GGG | + | chr1.2:83518834-83518853 | None:intergenic | 15.0% |
| !!! | AAAAGAGTTATTTTTTTTAG+GGG | - | chr1.2:83521347-83521366 | MS.gene065013:intron | 15.0% |
| !!! | AAAAGAGTTATTTTTTTTAG+GGG | + | chr1.2:83521366-83521347 | None:intergenic | 15.0% |
| !!! | AATACTAATGAAAATTTTTC+CGG | - | chr1.2:83520655-83520674 | MS.gene065013:intron | 15.0% |
| !!! | ATTATTGCAAATTATTTTGT+TGG | - | chr1.2:83522586-83522605 | MS.gene065013:intron | 15.0% |
| !!! | ATTTTCATTAGTATTTTTTC+CGG | - | chr1.2:83520552-83520571 | MS.gene065013:intron | 15.0% |
| !!! | ATTTTCATTAGTATTTTTTC+CGG | + | chr1.2:83520571-83520552 | None:intergenic | 15.0% |
| !!! | ATTTTTCTGTATTTATAAAC+CGG | - | chr1.2:83520577-83520596 | MS.gene065013:intron | 15.0% |
| !!! | CTTTTTTGTTTCTTTTTTTA+AGG | + | chr1.2:83518568-83518587 | None:intergenic | 15.0% |
| !!! | GAAAAGAGTTATTTTTTTTA+GGG | - | chr1.2:83521346-83521365 | MS.gene065013:intron | 15.0% |
| !!! | GAAAAGAGTTATTTTTTTTA+GGG | + | chr1.2:83521365-83521346 | None:intergenic | 15.0% |
| !!! | GTAATAAATACAAACTTTTA+AGG | - | chr1.2:83518616-83518635 | MS.gene065013:CDS | 15.0% |
| !!! | TAAAAAAAATAACTCTTTTC+AGG | - | chr1.2:83519958-83519977 | MS.gene065013:intron | 15.0% |
| !!! | TAAAAAAAATAACTCTTTTC+AGG | + | chr1.2:83519977-83519958 | None:intergenic | 15.0% |
| !!! | TGAAAAGAGTTATTTTTTTT+AGG | - | chr1.2:83521345-83521364 | MS.gene065013:intron | 15.0% |
| !!! | TGAAAAGAGTTATTTTTTTT+AGG | + | chr1.2:83521364-83521345 | None:intergenic | 15.0% |
| !!! | TTAAGCCATTTTATTATATA+TGG | - | chr1.2:83521414-83521433 | MS.gene065013:intron | 15.0% |
| !!! | TTATTTTCTAGATTAATAAC+CGG | + | chr1.2:83522148-83522167 | None:intergenic | 15.0% |
| !! | AAAATCAAATTAGAGAATGA+CGG | - | chr1.2:83521972-83521991 | MS.gene065013:intron | 20.0% |
| !! | AAATGAAAATCACACATAAA+TGG | - | chr1.2:83518846-83518865 | MS.gene065013:intron | 20.0% |
| !! | AACCAATCTAAATTATAATC+GGG | - | chr1.2:83522090-83522109 | MS.gene065013:intron | 20.0% |
| !! | AATTAAGCCTAATAAAATAG+AGG | + | chr1.2:83519892-83519911 | None:intergenic | 20.0% |
| !! | AATTTGTATAAGCAAAAGAA+AGG | + | chr1.2:83521925-83521944 | None:intergenic | 20.0% |
| !! | ACAAAAAATTATGTGTATTC+CGG | + | chr1.2:83520599-83520618 | None:intergenic | 20.0% |
| !! | ACGGAAAAATTTAAAAATTC+AGG | - | chr1.2:83520348-83520367 | MS.gene065013:intron | 20.0% |
| !! | ATATCTGGAAAATTTGAAAA+CGG | - | chr1.2:83520464-83520483 | MS.gene065013:intron | 20.0% |
| !! | ATTTGTATAAGCAAAAGAAA+GGG | + | chr1.2:83521924-83521943 | None:intergenic | 20.0% |
| !! | CAACCAATCTAAATTATAAT+CGG | - | chr1.2:83522089-83522108 | MS.gene065013:intron | 20.0% |
| !! | CTTCATATCAAATTTAAGAA+CGG | + | chr1.2:83521464-83521483 | None:intergenic | 20.0% |
| !! | GGTATCCATATATAATAAAA+TGG | + | chr1.2:83521422-83521441 | None:intergenic | 20.0% |
| !! | GTAAGATTTAAACTAAGTTT+AGG | - | chr1.2:83519258-83519277 | MS.gene065013:CDS | 20.0% |
| !! | TAAAAATAAAGAATGTCAAG+TGG | - | chr1.2:83522063-83522082 | MS.gene065013:intron | 20.0% |
| !! | TATAAATACAGAAAAATTCC+CGG | + | chr1.2:83520574-83520593 | None:intergenic | 20.0% |
| !! | TATTGGAAGAAATTTATTGT+TGG | - | chr1.2:83521537-83521556 | MS.gene065013:CDS | 20.0% |
| !!! | AAAGAGTTATTTTTTTTAGG+GGG | - | chr1.2:83521348-83521367 | MS.gene065013:intron | 20.0% |
| !!! | AAAGAGTTATTTTTTTTAGG+GGG | + | chr1.2:83521367-83521348 | None:intergenic | 20.0% |
| !!! | AATAAAAAATTTTACACACG+TGG | - | chr1.2:83521246-83521265 | MS.gene065013:intron | 20.0% |
| !!! | AATTTTCATTATGTGTATTC+CGG | + | chr1.2:83520625-83520644 | None:intergenic | 20.0% |
| !!! | ACACATAATTTTTTGTAAAC+CGG | - | chr1.2:83520603-83520622 | MS.gene065013:intron | 20.0% |
| !!! | ACTTTTAAGGAAACAATATT+TGG | - | chr1.2:83518629-83518648 | MS.gene065013:CDS | 20.0% |
| !!! | ATAATGGGAAATATTAGTAA+AGG | - | chr1.2:83522349-83522368 | MS.gene065013:intron | 20.0% |
| !!! | ATTGAAAATTCTGGAAAATA+CGG | - | chr1.2:83520507-83520526 | MS.gene065013:intron | 20.0% |
| !!! | CACCTTTTTTAATTTTAGAT+GGG | - | chr1.2:83518756-83518775 | MS.gene065013:intron | 20.0% |
| !!! | CATTTTTAGAAAATGTAGTA+GGG | + | chr1.2:83519540-83519559 | None:intergenic | 20.0% |
| !!! | TCATTTTTAGAAAATGTAGT+AGG | + | chr1.2:83519541-83519560 | None:intergenic | 20.0% |
| !!! | TTCAATTTTTTCAATTTTCC+AGG | + | chr1.2:83520493-83520512 | None:intergenic | 20.0% |
| !!! | TTTATATAACTGACTCTTTA+GGG | + | chr1.2:83519589-83519608 | None:intergenic | 20.0% |
| !!! | TTTTATATAACTGACTCTTT+AGG | + | chr1.2:83519590-83519609 | None:intergenic | 20.0% |
| !!! | TTTTCATTAGTATTTTTTCC+GGG | - | chr1.2:83520553-83520572 | MS.gene065013:intron | 20.0% |
| !!! | TTTTCATTAGTATTTTTTCC+GGG | + | chr1.2:83520572-83520553 | None:intergenic | 20.0% |
| ! | AAAATACTACATCTTGTTGA+TGG | - | chr1.2:83521640-83521659 | MS.gene065013:intron | 25.0% |
| ! | AAAATTGGTTAACTTCTTCA+GGG | - | chr1.2:83522630-83522649 | MS.gene065013:CDS | 25.0% |
| ! | AAGAAGAAGAAGAATACAAA+AGG | - | chr1.2:83522506-83522525 | MS.gene065013:intron | 25.0% |
| ! | AATGAGTGTAAATAATCAAG+TGG | - | chr1.2:83518715-83518734 | MS.gene065013:CDS | 25.0% |
| ! | ATACCATTGTTAATATGTAG+AGG | - | chr1.2:83521437-83521456 | MS.gene065013:CDS | 25.0% |
| ! | ATCCCGATTATAATTTAGAT+TGG | + | chr1.2:83522095-83522114 | None:intergenic | 25.0% |
| ! | ATTACTATCAATCATATGCA+TGG | + | chr1.2:83519331-83519350 | None:intergenic | 25.0% |
| ! | CAAAAATGATCGTAAATACT+TGG | + | chr1.2:83519152-83519171 | None:intergenic | 25.0% |
| ! | GAAAAAGATATTGTGATTGT+AGG | - | chr1.2:83518283-83518302 | MS.gene065013:CDS | 25.0% |
| ! | GAACAAATTGAATCATGATT+AGG | + | chr1.2:83522006-83522025 | None:intergenic | 25.0% |
| ! | TACACATAATGAAAATTTCC+CGG | - | chr1.2:83520628-83520647 | MS.gene065013:intron | 25.0% |
| ! | TAGCATAAAAACATACATCA+TGG | + | chr1.2:83521493-83521512 | None:intergenic | 25.0% |
| ! | TGAAACGAAATAACTTGAAT+TGG | - | chr1.2:83519713-83519732 | MS.gene065013:intron | 25.0% |
| !! | AAATGGCTTAATTACACTTT+TGG | + | chr1.2:83521405-83521424 | None:intergenic | 25.0% |
| !! | AATATTGATGATTGCAGATT+GGG | - | chr1.2:83519348-83519367 | MS.gene065013:CDS | 25.0% |
| !! | AATATTTGGAATGATGAAAG+TGG | - | chr1.2:83518643-83518662 | MS.gene065013:CDS | 25.0% |
| !! | ATATTTGGAATGATGAAAGT+GGG | - | chr1.2:83518644-83518663 | MS.gene065013:CDS | 25.0% |
| !! | ATTAGGCTTAATTACACTTT+TGG | - | chr1.2:83519899-83519918 | MS.gene065013:intron | 25.0% |
| !! | CACCCATCTAAAATTAAAAA+AGG | + | chr1.2:83518761-83518780 | None:intergenic | 25.0% |
| !! | CATGATTCAATTTGTTCAAA+CGG | - | chr1.2:83522009-83522028 | MS.gene065013:intron | 25.0% |
| !! | TAATATTGATGATTGCAGAT+TGG | - | chr1.2:83519347-83519366 | MS.gene065013:CDS | 25.0% |
| !!! | AAAATTTTGGCTACATACTT+AGG | - | chr1.2:83522655-83522674 | MS.gene065013:CDS | 25.0% |
| !!! | ACATATTGTTTTAGTTTAGC+AGG | + | chr1.2:83522220-83522239 | None:intergenic | 25.0% |
| !!! | ATTTAGTGGATTTGCTTTAA+CGG | - | chr1.2:83519410-83519429 | MS.gene065013:intron | 25.0% |
| !!! | CATATTGTTTTAGTTTAGCA+GGG | + | chr1.2:83522219-83522238 | None:intergenic | 25.0% |
| !!! | GCACCTTTTTTAATTTTAGA+TGG | - | chr1.2:83518755-83518774 | MS.gene065013:intron | 25.0% |
| !!! | TGTATGTTTTTATGCTATAG+TGG | - | chr1.2:83521496-83521515 | MS.gene065013:CDS | 25.0% |
| !!! | TTATTTTGTTGGTTCTATTC+AGG | - | chr1.2:83522597-83522616 | MS.gene065013:CDS | 25.0% |
| AAAAGACAATGACATGCTTA+AGG | - | chr1.2:83518583-83518602 | MS.gene065013:CDS | 30.0% | |
| AAAATTTGAAAACGGAATCC+TGG | - | chr1.2:83520472-83520491 | MS.gene065013:intron | 30.0% | |
| AGAAGAATACAAAAGGATTG+AGG | - | chr1.2:83522513-83522532 | MS.gene065013:intron | 30.0% | |
| ATGAGATATTACTCTGCTAT+TGG | - | chr1.2:83518951-83518970 | MS.gene065013:intron | 30.0% | |
| CAAAATTGGTTAACTTCTTC+AGG | - | chr1.2:83522629-83522648 | MS.gene065013:CDS | 30.0% | |
| CAAATTGAATCATGATTAGG+TGG | + | chr1.2:83522003-83522022 | None:intergenic | 30.0% | |
| GATGTGAAAATGTTCATGAA+AGG | + | chr1.2:83519641-83519660 | None:intergenic | 30.0% | |
| GATTAATAACCGGATTGAAT+CGG | + | chr1.2:83522138-83522157 | None:intergenic | 30.0% | |
| GTAAATAATCAAGTGGATGT+AGG | - | chr1.2:83518722-83518741 | MS.gene065013:CDS | 30.0% | |
| TAACTCTTTATCTGTAAGAC+AGG | + | chr1.2:83522188-83522207 | None:intergenic | 30.0% | |
| TATCATCCAAAAAGACTTAG+CGG | + | chr1.2:83518896-83518915 | None:intergenic | 30.0% | |
| TATTATTCACCTTGGTTGAT+AGG | + | chr1.2:83521901-83521920 | None:intergenic | 30.0% | |
| TTAGTATATATGTCGAGCTT+AGG | + | chr1.2:83520730-83520749 | None:intergenic | 30.0% | |
| ! | ATTTTCACGACAAATTTAGC+TGG | - | chr1.2:83519182-83519201 | MS.gene065013:CDS | 30.0% |
| ! | CTTCTTCAGGGATAAAATTT+TGG | - | chr1.2:83522642-83522661 | MS.gene065013:CDS | 30.0% |
| ! | TACTCTGCCTCTATTTTATT+AGG | - | chr1.2:83519882-83519901 | MS.gene065013:intron | 30.0% |
| ! | TCAGATAGTTTGAGATTTAG+TGG | - | chr1.2:83519396-83519415 | MS.gene065013:CDS | 30.0% |
| ! | TTCCTTTGGTTTCTTCAAAA+AGG | + | chr1.2:83522485-83522504 | None:intergenic | 30.0% |
| !! | ACTTGCACCTTATTGTTTTT+AGG | - | chr1.2:83518791-83518810 | MS.gene065013:intron | 30.0% |
| !! | ACTTGCACCTTATTGTTTTT+AGG | + | chr1.2:83518810-83518791 | None:intergenic | 30.0% |
| !! | TTCACTTTTGGTTGCAATTT+TGG | + | chr1.2:83520009-83519990 | None:intergenic | 30.0% |
| !! | TTTTAGAAAATGTAGTAGGG+AGG | + | chr1.2:83519537-83519556 | None:intergenic | 30.0% |
| !!! | GTGTTTATTGGTTTTTCACA+TGG | - | chr1.2:83521872-83521891 | MS.gene065013:intron | 30.0% |
| AACCTTTGACATGTACCTAA+TGG | + | chr1.2:83521593-83521612 | None:intergenic | 35.0% | |
| AAGTGGGTGTAAATTAGTGA+AGG | - | chr1.2:83518660-83518679 | MS.gene065013:CDS | 35.0% | |
| AATAACTTGAATTGGAGTGC+AGG | - | chr1.2:83519721-83519740 | MS.gene065013:intron | 35.0% | |
| AATATGCAAAGGAGAGAAGA+TGG | - | chr1.2:83522548-83522567 | MS.gene065013:intron | 35.0% | |
| ACACCCACCTAAAAACAATA+AGG | - | chr1.2:83518434-83518453 | MS.gene065013:intron | 35.0% | |
| ACACCCACCTAAAAACAATA+AGG | + | chr1.2:83518453-83518434 | None:intergenic | 35.0% | |
| ACCAACATCTACAACTTCAT+GGG | - | chr1.2:83519490-83519509 | MS.gene065013:intron | 35.0% | |
| ACGTCTTTCATAGACAACAA+AGG | - | chr1.2:83519786-83519805 | MS.gene065013:intron | 35.0% | |
| AGGTTTCCAGAAATATGCAA+AGG | - | chr1.2:83522537-83522556 | MS.gene065013:intron | 35.0% | |
| ATTGAGACATAGACATCCTT+GGG | - | chr1.2:83522321-83522340 | MS.gene065013:intron | 35.0% | |
| CAACCAAAAGTGAACTTAAG+GGG | - | chr1.2:83521320-83521339 | MS.gene065013:intron | 35.0% | |
| CAACCAAAAGTGAACTTAAG+GGG | + | chr1.2:83521339-83521320 | None:intergenic | 35.0% | |
| GAAAATCACACATAAATGGC+AGG | - | chr1.2:83518850-83518869 | MS.gene065013:intron | 35.0% | |
| GAATACAAAAGGATTGAGGA+AGG | - | chr1.2:83522517-83522536 | MS.gene065013:intron | 35.0% | |
| GATCAAATCAACTAATGAGC+TGG | - | chr1.2:83522112-83522131 | MS.gene065013:intron | 35.0% | |
| GCAACCAAAAGTGAACTTAA+GGG | - | chr1.2:83521319-83521338 | MS.gene065013:intron | 35.0% | |
| GCAACCAAAAGTGAACTTAA+GGG | + | chr1.2:83521338-83521319 | None:intergenic | 35.0% | |
| GGTCCTCTACATATTAACAA+TGG | + | chr1.2:83521443-83521462 | None:intergenic | 35.0% | |
| GTGACTACTTCTTTGGTTAT+GGG | - | chr1.2:83519747-83519766 | MS.gene065013:intron | 35.0% | |
| TCAGGAAAGTGGTTCAAAAT+TGG | - | chr1.2:83522615-83522634 | MS.gene065013:CDS | 35.0% | |
| TCAGGTCATCTTAAAGAATG+AGG | + | chr1.2:83519680-83519699 | None:intergenic | 35.0% | |
| TCTTCTTCTTCTTCTTCCTT+TGG | + | chr1.2:83522499-83522518 | None:intergenic | 35.0% | |
| TGACTACTTCTTTGGTTATG+GGG | - | chr1.2:83519748-83519767 | MS.gene065013:intron | 35.0% | |
| TGCAACCAAAAGTGAACTTA+AGG | - | chr1.2:83521318-83521337 | MS.gene065013:intron | 35.0% | |
| TGCAACCAAAAGTGAACTTA+AGG | + | chr1.2:83521337-83521318 | None:intergenic | 35.0% | |
| TGCTATTGGTGCAAGTATTT+AGG | - | chr1.2:83518965-83518984 | MS.gene065013:intron | 35.0% | |
| TGTGACTACTTCTTTGGTTA+TGG | - | chr1.2:83519746-83519765 | MS.gene065013:intron | 35.0% | |
| TTCTCTCCTTTGCATATTTC+TGG | + | chr1.2:83522546-83522565 | None:intergenic | 35.0% | |
| ! | AAGTATTTAGGACTCCACTT+TGG | - | chr1.2:83518977-83518996 | MS.gene065013:intron | 35.0% |
| ! | AGTACTTTGGCAAAGGTTTT+AGG | - | chr1.2:83521821-83521840 | MS.gene065013:intron | 35.0% |
| ! | ATCGCAACTTTTGGATACTT+AGG | - | chr1.2:83521376-83521395 | MS.gene065013:intron | 35.0% |
| ! | ATCGCAACTTTTGGATACTT+AGG | + | chr1.2:83521395-83521376 | None:intergenic | 35.0% |
| ! | GTACTTTGGCAAAGGTTTTA+GGG | - | chr1.2:83521822-83521841 | MS.gene065013:intron | 35.0% |
| ! | TCGCAACTTTTGGATACTTA+GGG | - | chr1.2:83521377-83521396 | MS.gene065013:intron | 35.0% |
| ! | TCGCAACTTTTGGATACTTA+GGG | + | chr1.2:83521396-83521377 | None:intergenic | 35.0% |
| ! | TGGATTTGCTTTAACGGTAT+GGG | - | chr1.2:83519416-83519435 | MS.gene065013:intron | 35.0% |
| !! | AGAAAGGGTATTATTCACCT+TGG | + | chr1.2:83521909-83521928 | None:intergenic | 35.0% |
| !! | ATCAAAACCAAGGTGTTGAT+TGG | - | chr1.2:83521670-83521689 | MS.gene065013:intron | 35.0% |
| !! | TCAAAACCAAGGTGTTGATT+GGG | - | chr1.2:83521671-83521690 | MS.gene065013:intron | 35.0% |
| !!! | AATCAACACCTTGGTTTTGA+TGG | + | chr1.2:83521671-83521690 | None:intergenic | 35.0% |
| !!! | ATTTAGCTGGCTAGTTTTAG+TGG | - | chr1.2:83519195-83519214 | MS.gene065013:CDS | 35.0% |
| !!! | GCACCTTATTGTTTTTAGGT+GGG | - | chr1.2:83518795-83518814 | MS.gene065013:intron | 35.0% |
| !!! | GCACCTTATTGTTTTTAGGT+GGG | + | chr1.2:83518814-83518795 | None:intergenic | 35.0% |
| !!! | TGCACCTTATTGTTTTTAGG+TGG | - | chr1.2:83518794-83518813 | MS.gene065013:intron | 35.0% |
| !!! | TGCACCTTATTGTTTTTAGG+TGG | + | chr1.2:83518813-83518794 | None:intergenic | 35.0% |
| !!! | TTTAGCTGGCTAGTTTTAGT+GGG | - | chr1.2:83519196-83519215 | MS.gene065013:CDS | 35.0% |
| AAAGGCAATGTTTGTGTTGC+TGG | - | chr1.2:83522367-83522386 | MS.gene065013:intron | 40.0% | |
| ACACATAAATGGCAGGTAAG+CGG | - | chr1.2:83518857-83518876 | MS.gene065013:intron | 40.0% | |
| ACATCCTTGGGAGCTAATAA+TGG | - | chr1.2:83522333-83522352 | MS.gene065013:intron | 40.0% | |
| ACCCATGAAGTTGTAGATGT+TGG | + | chr1.2:83519494-83519513 | None:intergenic | 40.0% | |
| AGCTATTCCATGTGATGACA+AGG | - | chr1.2:83521849-83521868 | MS.gene065013:intron | 40.0% | |
| CAAGGATGTCTATGTCTCAA+TGG | + | chr1.2:83522322-83522341 | None:intergenic | 40.0% | |
| CACCAACATCTACAACTTCA+TGG | - | chr1.2:83519489-83519508 | MS.gene065013:intron | 40.0% | |
| CACCATTAGGTACATGTCAA+AGG | - | chr1.2:83521588-83521607 | MS.gene065013:intron | 40.0% | |
| CAGGAATGTGACTACTTCTT+TGG | - | chr1.2:83519740-83519759 | MS.gene065013:intron | 40.0% | |
| CATCCTTGGGAGCTAATAAT+GGG | - | chr1.2:83522334-83522353 | MS.gene065013:intron | 40.0% | |
| CATGAAGTTGTAGATGTTGG+TGG | + | chr1.2:83519491-83519510 | None:intergenic | 40.0% | |
| CATTGAGACATAGACATCCT+TGG | - | chr1.2:83522320-83522339 | MS.gene065013:intron | 40.0% | |
| CCAATGTTCATGCAGTACTT+TGG | - | chr1.2:83521808-83521827 | MS.gene065013:intron | 40.0% | |
| GATATTGTGATTGTAGGAGC+TGG | - | chr1.2:83518289-83518308 | MS.gene065013:CDS | 40.0% | |
| GCTATTCCATGTGATGACAA+GGG | - | chr1.2:83521850-83521869 | MS.gene065013:intron | 40.0% | |
| GTATCCAAAAGTTGCGATTC+AGG | - | chr1.2:83519930-83519949 | MS.gene065013:intron | 40.0% | |
| GTATCCAAAAGTTGCGATTC+AGG | + | chr1.2:83519949-83519930 | None:intergenic | 40.0% | |
| GTGTTGTGCATTAGAAGATG+GGG | - | chr1.2:83522432-83522451 | MS.gene065013:intron | 40.0% | |
| TAAACACCCTTGTCATCACA+TGG | + | chr1.2:83521859-83521878 | None:intergenic | 40.0% | |
| TAACGGTATGGGAAAATGCT+TGG | - | chr1.2:83519427-83519446 | MS.gene065013:intron | 40.0% | |
| TATTTCGTTTCAGCCTCTCT+TGG | + | chr1.2:83519705-83519724 | None:intergenic | 40.0% | |
| TCTCGTGAACACGACATTTA+TGG | - | chr1.2:83518924-83518943 | MS.gene065013:intron | 40.0% | |
| TGGAACAACCATCAAAACCA+AGG | - | chr1.2:83521660-83521679 | MS.gene065013:intron | 40.0% | |
| TTCATGCAGTACTTTGGCAA+AGG | - | chr1.2:83521814-83521833 | MS.gene065013:intron | 40.0% | |
| TTCCAATACACCGAACTTCA+CGG | + | chr1.2:83521525-83521544 | None:intergenic | 40.0% | |
| TTTCCCATTATTAGCTCCCA+AGG | + | chr1.2:83522340-83522359 | None:intergenic | 40.0% | |
| ! | CGCAACTTTTGGATACTTAG+GGG | - | chr1.2:83521378-83521397 | MS.gene065013:intron | 40.0% |
| ! | CGCAACTTTTGGATACTTAG+GGG | + | chr1.2:83521397-83521378 | None:intergenic | 40.0% |
| ! | CTGTTGACTGGGTCAAAATT+GGG | - | chr1.2:83521280-83521299 | MS.gene065013:intron | 40.0% |
| ! | GATTGATTCTATGGCACCAA+TGG | - | chr1.2:83519098-83519117 | MS.gene065013:CDS | 40.0% |
| ! | GCAACTTTTGGATACTTAGG+GGG | - | chr1.2:83521379-83521398 | MS.gene065013:intron | 40.0% |
| ! | GCAACTTTTGGATACTTAGG+GGG | + | chr1.2:83521398-83521379 | None:intergenic | 40.0% |
| ! | GGTGTTGTGCATTAGAAGAT+GGG | - | chr1.2:83522431-83522450 | MS.gene065013:intron | 40.0% |
| ! | GTCAAAGGTTGTTGCTATTC+AGG | - | chr1.2:83521603-83521622 | MS.gene065013:intron | 40.0% |
| ! | GTGGATTTGCTTTAACGGTA+TGG | - | chr1.2:83519415-83519434 | MS.gene065013:intron | 40.0% |
| ! | GTTGTTGCTATTCAGGAATC+TGG | - | chr1.2:83521610-83521629 | MS.gene065013:intron | 40.0% |
| ! | TCTGTTGACTGGGTCAAAAT+TGG | - | chr1.2:83521279-83521298 | MS.gene065013:intron | 40.0% |
| ! | TTTAGCAAGGTGTTTAGCTG+AGG | - | chr1.2:83522459-83522478 | MS.gene065013:intron | 40.0% |
| !! | CAGATTGGGCATTGAAAGTT+TGG | - | chr1.2:83519362-83519381 | MS.gene065013:CDS | 40.0% |
| !! | CCAAAGTACTGCATGAACAT+TGG | + | chr1.2:83521811-83521830 | None:intergenic | 40.0% |
| !! | GGCCTTTTTGAAGAAACCAA+AGG | - | chr1.2:83522480-83522499 | MS.gene065013:intron | 40.0% |
| !! | GTGATGACAAGGGTGTTTAT+TGG | - | chr1.2:83521860-83521879 | MS.gene065013:intron | 40.0% |
| !! | GTTGGTTCTATTCAGGAAAG+TGG | - | chr1.2:83522604-83522623 | MS.gene065013:CDS | 40.0% |
| ACATGGACTCCTATCAACCA+AGG | - | chr1.2:83521889-83521908 | MS.gene065013:intron | 45.0% | |
| ACTAGGAAGCTCATTGGCAA+GGG | + | chr1.2:83521566-83521585 | None:intergenic | 45.0% | |
| ACTGGGTCAAAATTGGGCTA+GGG | - | chr1.2:83521286-83521305 | MS.gene065013:intron | 45.0% | |
| ACTGGGTCAAAATTGGGCTA+GGG | + | chr1.2:83521305-83521286 | None:intergenic | 45.0% | |
| ATCACACCCAATCAACACCT+TGG | + | chr1.2:83521680-83521699 | None:intergenic | 45.0% | |
| ATTGTAGGAGCTGGAATTGC+TGG | - | chr1.2:83518298-83518317 | MS.gene065013:CDS | 45.0% | |
| CACACATCCACACACATCAA+CGG | - | chr1.2:83519071-83519090 | MS.gene065013:CDS | 45.0% | |
| CACCAATGGCATCATTGCTA+TGG | - | chr1.2:83519112-83519131 | MS.gene065013:CDS | 45.0% | |
| GGTATGGGAAAATGCTTGGA+AGG | - | chr1.2:83519431-83519450 | MS.gene065013:intron | 45.0% | |
| TAAACTCTGTGGTGGCAAAG+TGG | - | chr1.2:83521704-83521723 | MS.gene065013:intron | 45.0% | |
| TCAACGAAGCCTCATACACA+GGG | - | chr1.2:83521734-83521753 | MS.gene065013:intron | 45.0% | |
| TCCAATACACCGAACTTCAC+GGG | + | chr1.2:83521524-83521543 | None:intergenic | 45.0% | |
| TGATGGAGTAAACTCTGTGG+TGG | - | chr1.2:83521696-83521715 | MS.gene065013:intron | 45.0% | |
| TGATGTGTGTGGATGTGTGT+GGG | + | chr1.2:83519070-83519089 | None:intergenic | 45.0% | |
| TGCATATCTCCCTGTGTATG+AGG | + | chr1.2:83521746-83521765 | None:intergenic | 45.0% | |
| TGCCATAGCAATGATGCCAT+TGG | + | chr1.2:83519117-83519136 | None:intergenic | 45.0% | |
| TGCCATTAATGGCACCAAAG+TGG | + | chr1.2:83518994-83519013 | None:intergenic | 45.0% | |
| TTCAACGAAGCCTCATACAC+AGG | - | chr1.2:83521733-83521752 | MS.gene065013:intron | 45.0% | |
| TTGATGTGTGTGGATGTGTG+TGG | + | chr1.2:83519071-83519090 | None:intergenic | 45.0% | |
| TTGTGCATTAGAAGATGGGG+TGG | - | chr1.2:83522435-83522454 | MS.gene065013:intron | 45.0% | |
| ! | AACGGCCAGGATTGATTCTA+TGG | - | chr1.2:83519089-83519108 | MS.gene065013:CDS | 45.0% |
| ! | AGGCCCCTTAAGTTCACTTT+TGG | - | chr1.2:83519978-83519997 | MS.gene065013:intron | 45.0% |
| ! | AGGCCCCTTAAGTTCACTTT+TGG | + | chr1.2:83519997-83519978 | None:intergenic | 45.0% |
| ! | GAAGTTGTAGATGTTGGTGG+CGG | + | chr1.2:83519488-83519507 | None:intergenic | 45.0% |
| ! | GGGTGTTGTGCATTAGAAGA+TGG | - | chr1.2:83522430-83522449 | MS.gene065013:intron | 45.0% |
| ! | GTGTGATGGAGTAAACTCTG+TGG | - | chr1.2:83521693-83521712 | MS.gene065013:intron | 45.0% |
| ! | GTTTCGCCGCTAAGTCTTTT+TGG | - | chr1.2:83518887-83518906 | MS.gene065013:intron | 45.0% |
| !! | AAGGTGTTGATTGGGTGTGA+TGG | - | chr1.2:83521679-83521698 | MS.gene065013:intron | 45.0% |
| !! | AGCGTTGACTGGGTCAAAAT+TGG | + | chr1.2:83520024-83520043 | None:intergenic | 45.0% |
| !! | ATGCAATGGTATGGTGCCAT+TGG | + | chr1.2:83519017-83519036 | None:intergenic | 45.0% |
| !! | ATGTACCTAATGGTGCCACT+AGG | + | chr1.2:83521583-83521602 | None:intergenic | 45.0% |
| !! | CATTGGTTCAAGCTTGTGAG+TGG | + | chr1.2:83521794-83521813 | None:intergenic | 45.0% |
| !! | CTCCACTTTGGTGCCATTAA+TGG | - | chr1.2:83518989-83519008 | MS.gene065013:intron | 45.0% |
| !! | GCGTTGACTGGGTCAAAATT+GGG | + | chr1.2:83520023-83520042 | None:intergenic | 45.0% |
| !! | TGGTGCCATAGAATCAATCC+TGG | + | chr1.2:83519097-83519116 | None:intergenic | 45.0% |
| !!! | AAGATGGGGTGGTTTTAGCA+AGG | - | chr1.2:83522446-83522465 | MS.gene065013:intron | 45.0% |
| !!! | TTTGGCAAAGGTTTTAGGGC+TGG | - | chr1.2:83521826-83521845 | MS.gene065013:intron | 45.0% |
| !! | AAAAAAATATTATAAAATTC+TGG | + | chr1.2:83521091-83521110 | None:intergenic | 5.0% |
| !! | TAAAAAATAAATAAAAATTC+TGG | - | chr1.2:83520093-83520112 | MS.gene065013:intron | 5.0% |
| !! | TTAAAAAAATAAAAAAATTC+TGG | + | chr1.2:83521042-83521061 | None:intergenic | 5.0% |
| !! | TTGAAAAATTAATAAAAAAT+TGG | - | chr1.2:83520169-83520188 | MS.gene065013:intron | 5.0% |
| !!! | ATTTTCATTTATATAAATAT+GGG | + | chr1.2:83518836-83518855 | None:intergenic | 5.0% |
| ACACAGGGAGATATGCAACG+AGG | - | chr1.2:83521749-83521768 | MS.gene065013:intron | 50.0% | |
| ACAGGGAGATATGCAACGAG+GGG | - | chr1.2:83521751-83521770 | MS.gene065013:intron | 50.0% | |
| AGATGACCTGATGCCAAGAG+AGG | - | chr1.2:83519689-83519708 | MS.gene065013:intron | 50.0% | |
| AGCTTCCTAGTGGCACCATT+AGG | - | chr1.2:83521575-83521594 | MS.gene065013:intron | 50.0% | |
| ATGATGCCTGATCTTGGCCA+AGG | - | chr1.2:83522406-83522425 | MS.gene065013:intron | 50.0% | |
| CAACATCCTTGGGACTTCAC+AGG | - | chr1.2:83518326-83518345 | MS.gene065013:intron | 50.0% | |
| CACAGGGAGATATGCAACGA+GGG | - | chr1.2:83521750-83521769 | MS.gene065013:intron | 50.0% | |
| CACCCTATGATGCCTGATCT+TGG | - | chr1.2:83522400-83522419 | MS.gene065013:intron | 50.0% | |
| CACTAGGAAGCTCATTGGCA+AGG | + | chr1.2:83521567-83521586 | None:intergenic | 50.0% | |
| CTAATGCACAACACCCTCCT+TGG | + | chr1.2:83522426-83522445 | None:intergenic | 50.0% | |
| CTTGCCAATGAGCTTCCTAG+TGG | - | chr1.2:83521565-83521584 | MS.gene065013:intron | 50.0% | |
| GAAGTCCCAAGGATGTTGTG+AGG | + | chr1.2:83518324-83518343 | None:intergenic | 50.0% | |
| GACTGGGTCAAAATTGGGCT+AGG | - | chr1.2:83521285-83521304 | MS.gene065013:intron | 50.0% | |
| GACTGGGTCAAAATTGGGCT+AGG | + | chr1.2:83521304-83521285 | None:intergenic | 50.0% | |
| GGCCAAGATCAGGCATCATA+GGG | + | chr1.2:83522405-83522424 | None:intergenic | 50.0% | |
| GTGTGTGTGATGTGTGTGTG+TGG | + | chr1.2:83519045-83519064 | None:intergenic | 50.0% | |
| TGGCCAAGATCAGGCATCAT+AGG | + | chr1.2:83522406-83522425 | None:intergenic | 50.0% | |
| TGTGTGATGTGTGTGTGTGG+TGG | + | chr1.2:83519042-83519061 | None:intergenic | 50.0% | |
| TTTCAGCCTCTCTTGGCATC+AGG | + | chr1.2:83519698-83519717 | None:intergenic | 50.0% | |
| ! | AGAGTACCTGTGAAGTCCCA+AGG | + | chr1.2:83518335-83518354 | None:intergenic | 50.0% |
| ! | ATAGTGGAGCCCGTGAAGTT+CGG | - | chr1.2:83521512-83521531 | MS.gene065013:CDS | 50.0% |
| ! | ATGAGCTGGCCGATTCAATC+CGG | - | chr1.2:83522126-83522145 | MS.gene065013:intron | 50.0% |
| ! | CTGGGTCAAAATTGGGCTAG+GGG | - | chr1.2:83521287-83521306 | MS.gene065013:intron | 50.0% |
| ! | CTGGGTCAAAATTGGGCTAG+GGG | + | chr1.2:83521306-83521287 | None:intergenic | 50.0% |
| ! | GGAAAATGCTTGGAAGGCGT+TGG | - | chr1.2:83519437-83519456 | MS.gene065013:intron | 50.0% |
| ! | GTGGTGGAGATGCAATGGTA+TGG | + | chr1.2:83519026-83519045 | None:intergenic | 50.0% |
| ! | TGGGTCAAAATTGGGCTAGG+GGG | - | chr1.2:83521288-83521307 | MS.gene065013:intron | 50.0% |
| ! | TGGGTCAAAATTGGGCTAGG+GGG | + | chr1.2:83521307-83521288 | None:intergenic | 50.0% |
| ! | TGTGTGTGGTGGAGATGCAA+TGG | + | chr1.2:83519031-83519050 | None:intergenic | 50.0% |
| !! | GGTGCCATTAATGGCACCAA+TGG | - | chr1.2:83518998-83519017 | MS.gene065013:intron | 50.0% |
| !! | GGTGCCATTGGTGCCATTAA+TGG | + | chr1.2:83519005-83519024 | None:intergenic | 50.0% |
| ATCCACACACATCAACGGCC+AGG | - | chr1.2:83519076-83519095 | MS.gene065013:CDS | 55.0% | |
| ATCCTGGCCGTTGATGTGTG+TGG | + | chr1.2:83519081-83519100 | None:intergenic | 55.0% | |
| ATGCCTGATCTTGGCCAAGG+AGG | - | chr1.2:83522409-83522428 | MS.gene065013:intron | 55.0% | |
| GCGTTGGATGTCGTTGGTGT+TGG | - | chr1.2:83519453-83519472 | MS.gene065013:intron | 55.0% | |
| TCTGTGGTGGCAAAGTGGCT+AGG | - | chr1.2:83521709-83521728 | MS.gene065013:intron | 55.0% | |
| TGCCTGATCTTGGCCAAGGA+GGG | - | chr1.2:83522410-83522429 | MS.gene065013:intron | 55.0% | |
| ! | CGCTGACGTGTCTGTTGACT+GGG | - | chr1.2:83521269-83521288 | MS.gene065013:intron | 55.0% |
| ! | GCTGGCCTCACAACATCCTT+GGG | - | chr1.2:83518316-83518335 | MS.gene065013:intron | 55.0% |
| ! | GGGGCCTGAATCGCAACTTT+TGG | - | chr1.2:83521367-83521386 | MS.gene065013:intron | 55.0% |
| ! | GGGGCCTGAATCGCAACTTT+TGG | + | chr1.2:83521386-83521367 | None:intergenic | 55.0% |
| ! | TGCTGGCCTCACAACATCCT+TGG | - | chr1.2:83518315-83518334 | MS.gene065013:intron | 55.0% |
| !! | GCCCGTGAAGTTCGGTGTAT+TGG | - | chr1.2:83521520-83521539 | MS.gene065013:CDS | 55.0% |
| !! | GGTGCCACTAGGAAGCTCAT+TGG | + | chr1.2:83521572-83521591 | None:intergenic | 55.0% |
| !! | GTTGTAGATGTTGGTGGCGG+AGG | + | chr1.2:83519485-83519504 | None:intergenic | 55.0% |
| !! | TGGAAGGCGTTGGATGTCGT+TGG | - | chr1.2:83519447-83519466 | MS.gene065013:intron | 55.0% |
| CACCCTCCTTGGCCAAGATC+AGG | + | chr1.2:83522415-83522434 | None:intergenic | 60.0% | |
| TGACCCAGTCAACGCTGACG+TGG | - | chr1.2:83520028-83520047 | MS.gene065013:intron | 60.0% | |
| ! | GCGCTGACGTGTCTGTTGAC+TGG | - | chr1.2:83521268-83521287 | MS.gene065013:intron | 60.0% |
| !! | CGTCCACGTCAGCGTTGACT+GGG | + | chr1.2:83520034-83520053 | None:intergenic | 60.0% |
| !! | GCGTCCACGTCAGCGTTGAC+TGG | + | chr1.2:83520035-83520054 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 83518268 | 83522676 | 83518268 | ID=MS.gene065013 |
| chr1.2 | mRNA | 83518268 | 83522676 | 83518268 | ID=MS.gene065013.t1;Parent=MS.gene065013 |
| chr1.2 | exon | 83522597 | 83522676 | 83522597 | ID=MS.gene065013.t1.exon1;Parent=MS.gene065013.t1 |
| chr1.2 | CDS | 83522597 | 83522676 | 83522597 | ID=cds.MS.gene065013.t1;Parent=MS.gene065013.t1 |
| chr1.2 | exon | 83521433 | 83521579 | 83521433 | ID=MS.gene065013.t1.exon2;Parent=MS.gene065013.t1 |
| chr1.2 | CDS | 83521433 | 83521579 | 83521433 | ID=cds.MS.gene065013.t1;Parent=MS.gene065013.t1 |
| chr1.2 | exon | 83521130 | 83521201 | 83521130 | ID=MS.gene065013.t1.exon3;Parent=MS.gene065013.t1 |
| chr1.2 | CDS | 83521130 | 83521201 | 83521130 | ID=cds.MS.gene065013.t1;Parent=MS.gene065013.t1 |
| chr1.2 | exon | 83519034 | 83519428 | 83519034 | ID=MS.gene065013.t1.exon4;Parent=MS.gene065013.t1 |
| chr1.2 | CDS | 83519034 | 83519428 | 83519034 | ID=cds.MS.gene065013.t1;Parent=MS.gene065013.t1 |
| chr1.2 | exon | 83518477 | 83518747 | 83518477 | ID=MS.gene065013.t1.exon5;Parent=MS.gene065013.t1 |
| chr1.2 | CDS | 83518477 | 83518747 | 83518477 | ID=cds.MS.gene065013.t1;Parent=MS.gene065013.t1 |
| chr1.2 | exon | 83518268 | 83518325 | 83518268 | ID=MS.gene065013.t1.exon6;Parent=MS.gene065013.t1 |
| chr1.2 | CDS | 83518268 | 83518325 | 83518268 | ID=cds.MS.gene065013.t1;Parent=MS.gene065013.t1 |
| Gene Sequence |
| Protein sequence |
