Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065051.t1 | XP_013470282.1 | 94.4 | 1168 | 55 | 1 | 1 | 1168 | 1 | 1158 | 0.00E+00 | 2054.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065051.t1 | A0A072W234 | 94.4 | 1168 | 55 | 1 | 1 | 1168 | 1 | 1158 | 0.0e+00 | 2054.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051433 | MS.gene065051 | 0.81046 | 1.14E-50 | -1.69E-46 |
| MS.gene054662 | MS.gene065051 | 0.80713 | 5.88E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065051.t1 | MTR_1g112190 | 95.120 | 1168 | 47 | 1 | 1 | 1168 | 1 | 1158 | 0.0 | 2234 |
| MS.gene065051.t1 | MTR_1g112190 | 95.034 | 1168 | 47 | 2 | 1 | 1168 | 1 | 1157 | 0.0 | 2229 |
| MS.gene065051.t1 | MTR_4g053240 | 31.326 | 1229 | 649 | 40 | 81 | 1165 | 38 | 1215 | 3.55e-111 | 376 |
| MS.gene065051.t1 | MTR_4g053240 | 31.054 | 1243 | 647 | 41 | 81 | 1165 | 38 | 1228 | 1.30e-109 | 372 |
| MS.gene065051.t1 | MTR_4g053240 | 30.616 | 1251 | 644 | 44 | 81 | 1165 | 38 | 1230 | 1.88e-103 | 355 |
| MS.gene065051.t1 | MTR_4g053240 | 30.658 | 1246 | 650 | 44 | 81 | 1165 | 90 | 1282 | 9.77e-103 | 353 |
| MS.gene065051.t1 | MTR_2g040470 | 30.559 | 769 | 402 | 26 | 473 | 1165 | 554 | 1266 | 5.23e-65 | 241 |
| MS.gene065051.t1 | MTR_2g040470 | 30.429 | 769 | 404 | 25 | 473 | 1165 | 554 | 1267 | 6.49e-65 | 241 |
| MS.gene065051.t1 | MTR_4g125820 | 28.096 | 961 | 496 | 32 | 331 | 1165 | 413 | 1304 | 1.44e-52 | 202 |
| MS.gene065051.t1 | MTR_2g040470 | 29.216 | 510 | 268 | 14 | 473 | 929 | 554 | 1023 | 2.63e-40 | 162 |
| MS.gene065051.t1 | MTR_4g125820 | 27.273 | 682 | 351 | 22 | 331 | 923 | 413 | 1038 | 5.03e-35 | 145 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065051.t1 | AT2G19390 | 26.777 | 1266 | 633 | 51 | 70 | 1165 | 64 | 1205 | 1.02e-57 | 218 |
| MS.gene065051.t1 | AT2G19390 | 26.777 | 1266 | 633 | 51 | 70 | 1165 | 64 | 1205 | 1.02e-57 | 218 |
| MS.gene065051.t1 | AT4G29790 | 26.573 | 1287 | 681 | 52 | 34 | 1165 | 28 | 1205 | 1.07e-52 | 202 |
| MS.gene065051.t1 | AT5G22450 | 32.908 | 392 | 182 | 11 | 785 | 1168 | 835 | 1153 | 7.85e-43 | 171 |
| MS.gene065051.t1 | AT5G22450 | 33.110 | 447 | 216 | 16 | 328 | 747 | 333 | 723 | 9.24e-35 | 145 |
| MS.gene065051.t1 | AT5G22450 | 30.682 | 264 | 175 | 5 | 50 | 311 | 4 | 261 | 8.75e-18 | 90.1 |
| MS.gene065051.t1 | AT5G22450 | 32.908 | 392 | 182 | 11 | 785 | 1168 | 835 | 1153 | 7.85e-43 | 171 |
| MS.gene065051.t1 | AT5G22450 | 33.110 | 447 | 216 | 16 | 328 | 747 | 333 | 723 | 9.24e-35 | 145 |
| MS.gene065051.t1 | AT5G22450 | 30.682 | 264 | 175 | 5 | 50 | 311 | 4 | 261 | 8.75e-18 | 90.1 |
| MS.gene065051.t1 | AT5G22450 | 32.908 | 392 | 182 | 11 | 785 | 1168 | 835 | 1153 | 7.85e-43 | 171 |
| MS.gene065051.t1 | AT5G22450 | 33.110 | 447 | 216 | 16 | 328 | 747 | 333 | 723 | 9.24e-35 | 145 |
| MS.gene065051.t1 | AT5G22450 | 30.682 | 264 | 175 | 5 | 50 | 311 | 4 | 261 | 8.75e-18 | 90.1 |
Find 289 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGTCCTGCTGTTGTTAAAT+TGG | 0.193168 | 1.2:-82993661 | None:intergenic |
| GACAGTCAGACGTTTGTTTC+TGG | 0.207012 | 1.2:+82986172 | MS.gene065051:CDS |
| TCATTCTGAAATTGATTCTT+TGG | 0.208369 | 1.2:-82986820 | None:intergenic |
| TACACAAATTGAACAAAGTT+TGG | 0.242640 | 1.2:+82986785 | MS.gene065051:CDS |
| GGTCTCAAGGCCAGCTGCTT+TGG | 0.250182 | 1.2:+82996544 | MS.gene065051:CDS |
| GTCTCAAGGCCAGCTGCTTT+GGG | 0.257683 | 1.2:+82996545 | MS.gene065051:CDS |
| TTATTCAGAATGACATTCTT+AGG | 0.257932 | 1.2:-82986946 | None:intergenic |
| AACTCTTGGCAATTCGTTCT+TGG | 0.259541 | 1.2:+82997083 | MS.gene065051:CDS |
| AGAGGTAGCATTCCCTTTAC+AGG | 0.260163 | 1.2:-82993711 | None:intergenic |
| TTGGCTGTTCTAGTTCATTT+TGG | 0.265840 | 1.2:+82990735 | MS.gene065051:CDS |
| TAGAAGTTTACCACTAGTTC+TGG | 0.282708 | 1.2:-82993791 | None:intergenic |
| TCCCGTGTTTCTTCAATTGC+TGG | 0.282994 | 1.2:-82987669 | None:intergenic |
| TGATTCTCCTTTGGAGGCTT+GGG | 0.284378 | 1.2:+82993628 | MS.gene065051:CDS |
| CAGCAAGAATGTGCACTATC+AGG | 0.299539 | 1.2:+82996728 | MS.gene065051:CDS |
| CTCCAAGGCTTTGAGTGTTT+CGG | 0.312802 | 1.2:-82988951 | None:intergenic |
| AAATGGTGAAAGTAAATTAA+AGG | 0.330480 | 1.2:+82989306 | MS.gene065051:CDS |
| TTAGGCCTGCTCTTTAATCT+TGG | 0.338568 | 1.2:-82986928 | None:intergenic |
| TTACATACAGCTGGCATTGC+TGG | 0.340371 | 1.2:-82990626 | None:intergenic |
| GGCTTGTGGCTCTGGTCAAC+TGG | 0.340810 | 1.2:+82997317 | MS.gene065051:CDS |
| AAGCTGACAGGAGCAAAATT+AGG | 0.342707 | 1.2:-82990770 | None:intergenic |
| TTCTGGTGCTAATATGTTGC+AGG | 0.344256 | 1.2:+82986189 | MS.gene065051:CDS |
| AATCAGTTGGCTTGTGGCTC+TGG | 0.348365 | 1.2:+82997309 | MS.gene065051:CDS |
| ACTCTTGGCAATTCGTTCTT+GGG | 0.349689 | 1.2:+82997084 | MS.gene065051:CDS |
| CAATAGCTTTGGACAGCCTT+TGG | 0.357348 | 1.2:+82987569 | MS.gene065051:CDS |
| AAGTATACTGTTACTAGTTC+AGG | 0.360250 | 1.2:+82986286 | MS.gene065051:CDS |
| CATGTAGGAACTTATATTAC+AGG | 0.360509 | 1.2:-82989377 | None:intergenic |
| ATGATTCTCCTTTGGAGGCT+TGG | 0.360754 | 1.2:+82993627 | MS.gene065051:CDS |
| GCACGAATGCAAGAGGCTTC+TGG | 0.361404 | 1.2:+82986427 | MS.gene065051:CDS |
| TAGGTAAAGACCTGGATTCT+TGG | 0.362606 | 1.2:+82997466 | MS.gene065051:CDS |
| GGAACTAGCGCTGCAAAGTA+TGG | 0.362981 | 1.2:+82996512 | MS.gene065051:CDS |
| GTGTTTCGGAAGAATGAGAT+AGG | 0.365732 | 1.2:-82988937 | None:intergenic |
| GACCCACTTATTGTTTCATT+TGG | 0.369307 | 1.2:-82986850 | None:intergenic |
| CACGAGCCGGAGTTGCAAAT+AGG | 0.371672 | 1.2:-82996652 | None:intergenic |
| TTTCATCACAATTTAAGAAC+GGG | 0.373777 | 1.2:-82989102 | None:intergenic |
| GGCTCTGCTCGATCCATTGA+TGG | 0.377170 | 1.2:+82987726 | MS.gene065051:CDS |
| CTTAACAGACGTGCCTGAAC+TGG | 0.379880 | 1.2:+82997425 | MS.gene065051:CDS |
| GCCTAACCCATTGTGCCAAA+TGG | 0.380115 | 1.2:-82989033 | None:intergenic |
| TTCGACATCTTCAGCTGATT+CGG | 0.380329 | 1.2:+82986216 | MS.gene065051:CDS |
| GAATCTGGCGCTGGAGAAAA+TGG | 0.383496 | 1.2:+82989289 | MS.gene065051:CDS |
| GAAGGCTTCATATTTCGAAT+TGG | 0.394462 | 1.2:-82989544 | None:intergenic |
| GACCTGGATGCTGCCAAGAT+TGG | 0.397485 | 1.2:+82996982 | MS.gene065051:CDS |
| TATGGAGGATAAACTCTTGC+TGG | 0.397570 | 1.2:+82993745 | MS.gene065051:CDS |
| TGCCGGATGTTTGAGGAAAC+CGG | 0.399684 | 1.2:+82996593 | MS.gene065051:CDS |
| CAGGTCCCGGGGACATCTCT+TGG | 0.401708 | 1.2:+82986319 | MS.gene065051:CDS |
| ACACAAATTGAACAAAGTTT+GGG | 0.413212 | 1.2:+82986786 | MS.gene065051:CDS |
| CACTTTGAGATAATCTAGTC+GGG | 0.413876 | 1.2:-82989264 | None:intergenic |
| TAAATTAAAGGCGGAAGGAT+TGG | 0.414365 | 1.2:+82989318 | MS.gene065051:CDS |
| TCCCGGTTTCCTCAAACATC+CGG | 0.414699 | 1.2:-82996595 | None:intergenic |
| TGCTAGATGCCGGATGTTTG+AGG | 0.415315 | 1.2:+82996586 | MS.gene065051:CDS |
| GAAATGCAAGTTCCATTAGA+AGG | 0.416262 | 1.2:+82989121 | MS.gene065051:CDS |
| TTGATAGCACCCTTGGATAT+TGG | 0.416356 | 1.2:-82989199 | None:intergenic |
| CTCCCGCATACCAGTGGATT+CGG | 0.421173 | 1.2:+82986384 | MS.gene065051:CDS |
| ACGTACCCATTTGGCACAAT+GGG | 0.423952 | 1.2:+82989027 | MS.gene065051:CDS |
| CCGACACTGTTTCCTGTAAA+GGG | 0.424460 | 1.2:+82993699 | MS.gene065051:CDS |
| AGTAAAGCTCTTGCTCATCT+TGG | 0.424989 | 1.2:+82989707 | MS.gene065051:CDS |
| TGCAAAGTATGGACTTTCTA+AGG | 0.426606 | 1.2:+82996523 | MS.gene065051:CDS |
| GTCGGTGTTGCATCCGTGTT+CGG | 0.433094 | 1.2:-82993681 | None:intergenic |
| TACATCAGCTATTGAGATAC+AGG | 0.434445 | 1.2:+82986978 | MS.gene065051:CDS |
| TTCGAAAAGCACAATCTTCA+AGG | 0.434742 | 1.2:-82986348 | None:intergenic |
| CCCATTTGGCACAATGGGTT+AGG | 0.435068 | 1.2:+82989032 | MS.gene065051:CDS |
| AGATTGGACCAATACTGAAC+GGG | 0.436516 | 1.2:+82996998 | MS.gene065051:CDS |
| CAATGGTAAACGTACCCATT+TGG | 0.437771 | 1.2:+82989018 | MS.gene065051:CDS |
| TCCAACCTGGCAGGTAGGTC+AGG | 0.438054 | 1.2:+82990565 | MS.gene065051:intron |
| GCTCATCTTGGAGATATTGC+GGG | 0.438055 | 1.2:+82989719 | MS.gene065051:CDS |
| TCCAGGTCAGAGGGATGGTC+TGG | 0.438178 | 1.2:-82996967 | None:intergenic |
| TGAGGCTCGTTCACATTTGA+AGG | 0.438569 | 1.2:-82988977 | None:intergenic |
| TCGTTCTTGGGTGGAGCAAA+AGG | 0.439437 | 1.2:+82997096 | MS.gene065051:CDS |
| TTCAAGGGGACTTTGTCAAA+TGG | 0.441047 | 1.2:+82986088 | MS.gene065051:CDS |
| ACTTCTGTGGAGTCCAGTTC+AGG | 0.443329 | 1.2:-82997438 | None:intergenic |
| GCTTCAAGGGCACCTCGAAC+TGG | 0.443422 | 1.2:+82988887 | MS.gene065051:CDS |
| TTTGGACAGCCTTTGGCAAT+CGG | 0.443677 | 1.2:+82987576 | MS.gene065051:CDS |
| AAGAGATGATTCTCCTTTGG+AGG | 0.446072 | 1.2:+82993622 | MS.gene065051:CDS |
| GTTCAGTATTGGTCCAATCT+TGG | 0.446244 | 1.2:-82996995 | None:intergenic |
| GAAGGGGAACAACCTTCTAA+TGG | 0.447725 | 1.2:-82989133 | None:intergenic |
| GAAGGGCAAAACAATAGCTT+TGG | 0.448410 | 1.2:+82987558 | MS.gene065051:CDS |
| TGAAAGAGATGATTCTCCTT+TGG | 0.449392 | 1.2:+82993619 | MS.gene065051:CDS |
| TTCCGAAACACTCAAAGCCT+TGG | 0.449624 | 1.2:+82988949 | MS.gene065051:CDS |
| CTAAAGCGAGCTAATGAGTC+TGG | 0.450921 | 1.2:+82987777 | MS.gene065051:CDS |
| CTTGGATTTGCAAACTCTGT+AGG | 0.451805 | 1.2:-82986910 | None:intergenic |
| GCTGGCATTGCTGGCAAAGT+TGG | 0.453233 | 1.2:-82990617 | None:intergenic |
| GTCCATAGCAACTTGCTCAA+TGG | 0.453819 | 1.2:-82996198 | None:intergenic |
| AAATGGGCAGAGGGGAAATT+CGG | 0.454592 | 1.2:+82986105 | MS.gene065051:CDS |
| GAGAATTATGAGCAAGTGGC+AGG | 0.454793 | 1.2:-82996706 | None:intergenic |
| TTCAAGCAGTAGAAGAAGGC+AGG | 0.455185 | 1.2:+82996043 | MS.gene065051:CDS |
| CGAACTGGTGATTTGATAGC+TGG | 0.455232 | 1.2:+82988902 | MS.gene065051:CDS |
| TCGCGAGGAATCGACTTTCA+AGG | 0.457431 | 1.2:+82986072 | MS.gene065051:CDS |
| CCTAACCCATTGTGCCAAAT+GGG | 0.457881 | 1.2:-82989032 | None:intergenic |
| GCAGAAGGAATGCTTCCAAC+AGG | 0.459208 | 1.2:+82995874 | MS.gene065051:CDS |
| TTATCTCAAAGTGAAGAATC+TGG | 0.461189 | 1.2:+82989274 | MS.gene065051:CDS |
| TATATTACAGGAATTATTTG+TGG | 0.461643 | 1.2:-82989365 | None:intergenic |
| GCATCAGGTTAAAACAATAG+AGG | 0.462878 | 1.2:+82990904 | MS.gene065051:intron |
| AGAACCAATTTAACAACAGC+AGG | 0.463060 | 1.2:+82993657 | MS.gene065051:CDS |
| ACCGACACTGTTTCCTGTAA+AGG | 0.465916 | 1.2:+82993698 | MS.gene065051:CDS |
| TCAGTAAGTGGGACAATCAA+TGG | 0.466217 | 1.2:+82989001 | MS.gene065051:CDS |
| TTACCGGGGCATCACTTTGA+AGG | 0.467253 | 1.2:-82990958 | None:intergenic |
| TTGAAACCTACATCAACTCT+TGG | 0.468880 | 1.2:+82997069 | MS.gene065051:CDS |
| TGCAGGTTCATTTCCTTGCA+CGG | 0.469228 | 1.2:+82996924 | MS.gene065051:intron |
| TTCAATTTCTCCGAATCCAC+TGG | 0.471800 | 1.2:-82986394 | None:intergenic |
| TTGCACGGAGCAAAATGTCT+TGG | 0.471921 | 1.2:+82996939 | MS.gene065051:CDS |
| ATCAGCTCAGTCTTCAAAGT+TGG | 0.472482 | 1.2:+82986243 | MS.gene065051:CDS |
| TGAGGAACAAAGACACTTCT+CGG | 0.472612 | 1.2:+82997136 | MS.gene065051:CDS |
| TTGTCGCAAAGTCCTCTTGA+GGG | 0.473433 | 1.2:+82993383 | MS.gene065051:CDS |
| ACTCTTTGATACAATGGTGC+TGG | 0.474021 | 1.2:-82993527 | None:intergenic |
| CTCCGAATCCACTGGTATGC+GGG | 0.476667 | 1.2:-82986386 | None:intergenic |
| CTGCTTTGGGTTTCATGAAG+AGG | 0.478689 | 1.2:+82996558 | MS.gene065051:CDS |
| CAAATCCAAGATTAAAGAGC+AGG | 0.478922 | 1.2:+82986923 | MS.gene065051:CDS |
| ATCAAAAGAGCCACCCTCAA+TGG | 0.480773 | 1.2:+82993439 | MS.gene065051:CDS |
| TGCACGGAGCAAAATGTCTT+GGG | 0.480816 | 1.2:+82996940 | MS.gene065051:CDS |
| AGGCACGTCTGTTAAGTCCA+TGG | 0.484505 | 1.2:-82997418 | None:intergenic |
| CTTGGCAATTCGTTCTTGGG+TGG | 0.488638 | 1.2:+82997087 | MS.gene065051:CDS |
| AGGTGAGTTAAGACAGGTCC+CGG | 0.491255 | 1.2:+82986306 | MS.gene065051:CDS |
| AGTAGAAGAAGGCAGGGAAA+TGG | 0.492162 | 1.2:+82996050 | MS.gene065051:CDS |
| AGACAAAAGGCAAAGCTTCA+AGG | 0.493547 | 1.2:+82988873 | MS.gene065051:CDS |
| TATTAATTCTGAAAATCAGT+TGG | 0.494790 | 1.2:+82997296 | MS.gene065051:CDS |
| TCAAGGGGACTTTGTCAAAT+GGG | 0.495511 | 1.2:+82986089 | MS.gene065051:CDS |
| TTGGATTTGCAAACTCTGTA+GGG | 0.495606 | 1.2:-82986909 | None:intergenic |
| CGCGAGGAATCGACTTTCAA+GGG | 0.495893 | 1.2:+82986073 | MS.gene065051:CDS |
| GGCACGTCTGTTAAGTCCAT+GGG | 0.502249 | 1.2:-82997417 | None:intergenic |
| TGCTCATCTTGGAGATATTG+CGG | 0.502630 | 1.2:+82989718 | MS.gene065051:CDS |
| AAATAGGATGTCTTTAAACA+TGG | 0.504700 | 1.2:-82996636 | None:intergenic |
| TTCATGAAACCCAAAGCAGC+TGG | 0.504765 | 1.2:-82996554 | None:intergenic |
| TAAAAGCCTGATCTTGCTGA+TGG | 0.504853 | 1.2:+82995815 | MS.gene065051:intron |
| AACTTTGAAGACTGAGCTGA+TGG | 0.505026 | 1.2:-82986241 | None:intergenic |
| GGTATTTATCTACAGACAAA+AGG | 0.505651 | 1.2:+82988860 | MS.gene065051:CDS |
| AAATTCGGTAAATAGTGATT+CGG | 0.505843 | 1.2:+82986120 | MS.gene065051:CDS |
| AGGATCTCTCGGCAAGTTGG+TGG | 0.506045 | 1.2:+82997269 | MS.gene065051:CDS |
| AATGTTGTTGATAGCACCCT+TGG | 0.507366 | 1.2:-82989206 | None:intergenic |
| ATCAAAGATGTTTGTCTCAA+GGG | 0.507612 | 1.2:+82990930 | MS.gene065051:CDS |
| CAACCTCCATCAGCAAGATC+AGG | 0.507945 | 1.2:-82995821 | None:intergenic |
| TTGCCAAATGAAACAATAAG+TGG | 0.508070 | 1.2:+82986847 | MS.gene065051:CDS |
| GACTTTGTCAAATGGGCAGA+GGG | 0.508226 | 1.2:+82986096 | MS.gene065051:CDS |
| TACCTCTGAGCAAACGTGTA+TGG | 0.509694 | 1.2:+82993727 | MS.gene065051:CDS |
| GCTCTGCTCGATCCATTGAT+GGG | 0.510443 | 1.2:+82987727 | MS.gene065051:CDS |
| GGCCATTGAGCAAGTTGCTA+TGG | 0.510640 | 1.2:+82996196 | MS.gene065051:CDS |
| AAGCTGAACAAAGTAGAGAC+TGG | 0.511005 | 1.2:+82989418 | MS.gene065051:CDS |
| GACAAAAGGCAAAGCTTCAA+GGG | 0.511520 | 1.2:+82988874 | MS.gene065051:CDS |
| TTCCTCGCGACTAGCTGTGC+TGG | 0.511869 | 1.2:-82986059 | None:intergenic |
| CTTATTCAAGCAGTAGAAGA+AGG | 0.514559 | 1.2:+82996039 | MS.gene065051:CDS |
| TTGAATAATAGTTTGATCAA+CGG | 0.516324 | 1.2:-82995849 | None:intergenic |
| TGTTTCGGAAGAATGAGATA+GGG | 0.517088 | 1.2:-82988936 | None:intergenic |
| CTGCCTCTGTCTCCCTCAAG+AGG | 0.518984 | 1.2:-82993395 | None:intergenic |
| TTTACCTACACCTACTTCTG+TGG | 0.520097 | 1.2:-82997451 | None:intergenic |
| ATAGCACCCTTGGATATTGG+TGG | 0.520217 | 1.2:-82989196 | None:intergenic |
| ATTGTCCCACTTACTGAATG+AGG | 0.521792 | 1.2:-82988995 | None:intergenic |
| AACGAGCCTCATTCAGTAAG+TGG | 0.522312 | 1.2:+82988989 | MS.gene065051:CDS |
| TATGGACAAACTTGTTGAGT+TGG | 0.522623 | 1.2:+82996214 | MS.gene065051:CDS |
| CTATTCTTTCCGATTGCCAA+AGG | 0.523542 | 1.2:-82987585 | None:intergenic |
| TCACTTTGAGATAATCTAGT+CGG | 0.524689 | 1.2:-82989265 | None:intergenic |
| AACGTACCCATTTGGCACAA+TGG | 0.526428 | 1.2:+82989026 | MS.gene065051:CDS |
| CACATTTGAAGGTTGCTCCA+AGG | 0.531123 | 1.2:-82988966 | None:intergenic |
| GAAGGATTGGACAGAAGCAA+AGG | 0.531529 | 1.2:+82989331 | MS.gene065051:CDS |
| GTCCAATCTTGGCAGCATCC+AGG | 0.532965 | 1.2:-82996984 | None:intergenic |
| CTGCGGATAATAGTTCTTCA+CGG | 0.534224 | 1.2:-82990594 | None:intergenic |
| TCTGAAAATCAGTTGGCTTG+TGG | 0.534672 | 1.2:+82997303 | MS.gene065051:CDS |
| CCTGTGTTACCTCAAACCTA+TGG | 0.536754 | 1.2:-82987817 | None:intergenic |
| ATCAACCGTGTCAACCATTG+AGG | 0.538086 | 1.2:-82993453 | None:intergenic |
| TGCTGAGAATTATGAGCAAG+TGG | 0.538433 | 1.2:-82996710 | None:intergenic |
| CTACATGTCAGTGACAGAAA+AGG | 0.539919 | 1.2:+82989393 | MS.gene065051:CDS |
| GTTCTAGTATCAACTTCAGA+AGG | 0.540712 | 1.2:-82989151 | None:intergenic |
| CAAAGTGAAGAATCTGGCGC+TGG | 0.540817 | 1.2:+82989280 | MS.gene065051:CDS |
| AAGGATTGGACAGAAGCAAA+GGG | 0.541925 | 1.2:+82989332 | MS.gene065051:CDS |
| CTTGTGATGCCATAGGTTTG+AGG | 0.543178 | 1.2:+82987808 | MS.gene065051:CDS |
| TCAAGCAGTAGAAGAAGGCA+GGG | 0.543470 | 1.2:+82996044 | MS.gene065051:CDS |
| AGACATCCTATTTGCAACTC+CGG | 0.544450 | 1.2:+82996646 | MS.gene065051:CDS |
| AACTATTATTCAATTGCAGA+AGG | 0.545686 | 1.2:+82995859 | MS.gene065051:CDS |
| TCCAGACCATCCCTCTGACC+TGG | 0.546662 | 1.2:+82996966 | MS.gene065051:CDS |
| GTGCAGTCTTGTGATGCCAT+AGG | 0.548176 | 1.2:+82987801 | MS.gene065051:CDS |
| GAATTGCCAAGAGTTGATGT+AGG | 0.549037 | 1.2:-82997075 | None:intergenic |
| ACGAATTCTACTACAACTAG+TGG | 0.549368 | 1.2:+82989172 | MS.gene065051:CDS |
| AGAAAACCTTCCATGTGCAC+TGG | 0.549511 | 1.2:+82987705 | MS.gene065051:CDS |
| GATCAAAGATGTTTGTCTCA+AGG | 0.549537 | 1.2:+82990929 | MS.gene065051:CDS |
| TAGTTCAGGTGAGTTAAGAC+AGG | 0.550045 | 1.2:+82986300 | MS.gene065051:CDS |
| CAACACCGAGGATGGTGGTA+AGG | 0.553181 | 1.2:+82987611 | MS.gene065051:CDS |
| ACAAACCTTACCACCATCCT+CGG | 0.553794 | 1.2:-82987616 | None:intergenic |
| ATGGACTTTCTAAGGTCTCA+AGG | 0.553908 | 1.2:+82996531 | MS.gene065051:CDS |
| TTGCCTTCAAAGTGATGCCC+CGG | 0.555945 | 1.2:+82990955 | MS.gene065051:CDS |
| AATCATCCATAGGTATGTCT+AGG | 0.556030 | 1.2:-82997536 | None:intergenic |
| CATGGGTTCCTCAGTTTCAA+CGG | 0.556209 | 1.2:-82997400 | None:intergenic |
| CATAGTCTACTTGAAGCAGC+TGG | 0.556894 | 1.2:+82990799 | MS.gene065051:CDS |
| GAAAGAGGAGTGGAAGAGTG+AGG | 0.556919 | 1.2:+82997118 | MS.gene065051:CDS |
| CTAGCTGTGCTGGAACCAAA+CGG | 0.557811 | 1.2:-82986049 | None:intergenic |
| ACCTATGGATGATTTGTCCA+TGG | 0.558680 | 1.2:+82997545 | MS.gene065051:CDS |
| AGAGGACTCTTGCTAGATGC+CGG | 0.560381 | 1.2:+82996576 | MS.gene065051:CDS |
| GAAAGTAAATTAAAGGCGGA+AGG | 0.560796 | 1.2:+82989313 | MS.gene065051:CDS |
| AAGAGGCTTCTGGCAAGTCT+AGG | 0.560990 | 1.2:+82986437 | MS.gene065051:CDS |
| TGTTTCCAAGAGATGTCCCC+GGG | 0.561992 | 1.2:-82986324 | None:intergenic |
| ATTTCATCACAATTTAAGAA+CGG | 0.562207 | 1.2:-82989103 | None:intergenic |
| GCTCGATCCATTGATGGGGA+AGG | 0.562995 | 1.2:+82987732 | MS.gene065051:CDS |
| GAACTGGACTCCACAGAAGT+AGG | 0.565988 | 1.2:+82997441 | MS.gene065051:CDS |
| AGAAGGATCTCTCGGCAAGT+TGG | 0.566379 | 1.2:+82997266 | MS.gene065051:CDS |
| AATAGGATGTCTTTAAACAT+GGG | 0.566852 | 1.2:-82996635 | None:intergenic |
| GTTGGCTTATAAGAAGAAGC+TGG | 0.567275 | 1.2:+82996232 | MS.gene065051:CDS |
| TCGAGCAGAGCCAGTGCACA+TGG | 0.568733 | 1.2:-82987715 | None:intergenic |
| GTATCTCAATAGCTGATGTA+CGG | 0.569687 | 1.2:-82986975 | None:intergenic |
| ACAAGATGATGAGGTTGCGG+TGG | 0.570723 | 1.2:+82997512 | MS.gene065051:CDS |
| GGAGCAAAAGGAAAGAGGAG+TGG | 0.571632 | 1.2:+82997108 | MS.gene065051:CDS |
| AATAGAGACAACACCGAGGA+TGG | 0.572865 | 1.2:+82987603 | MS.gene065051:CDS |
| AGAAGAAGTGCTACTTGATG+AGG | 0.574275 | 1.2:+82997029 | MS.gene065051:CDS |
| ACTATGACATCCAAGCTGAC+AGG | 0.574722 | 1.2:-82990782 | None:intergenic |
| AAAGTTGGGTCTGTATCTCA+TGG | 0.575701 | 1.2:+82997366 | MS.gene065051:CDS |
| AACAACAGCAGGACCGAACA+CGG | 0.575807 | 1.2:+82993668 | MS.gene065051:CDS |
| GTTGATAAATACTAGGCCGA+AGG | 0.575874 | 1.2:+82987540 | MS.gene065051:intron |
| GCCGGATGTTTGAGGAAACC+GGG | 0.576397 | 1.2:+82996594 | MS.gene065051:CDS |
| CAATGTCTAACCAAGAATCC+AGG | 0.577864 | 1.2:-82997476 | None:intergenic |
| CAAATTGAACAAAGTTTGGG+AGG | 0.579124 | 1.2:+82986789 | MS.gene065051:CDS |
| CTTCTTCTGAAAAGAAAGCA+AGG | 0.579313 | 1.2:+82989563 | MS.gene065051:CDS |
| CGGAGAAGTTCTGTTCAAAG+AGG | 0.581970 | 1.2:+82997156 | MS.gene065051:CDS |
| TAATATTTATAGGCGACTCG+TGG | 0.583866 | 1.2:+82996491 | MS.gene065051:intron |
| ACTTCTGCAGAAGGATCTCT+CGG | 0.584321 | 1.2:+82997258 | MS.gene065051:CDS |
| GGTGAGTTAAGACAGGTCCC+GGG | 0.586910 | 1.2:+82986307 | MS.gene065051:CDS |
| CAAGATGATGAGGTTGCGGT+GGG | 0.587515 | 1.2:+82997513 | MS.gene065051:CDS |
| CTGTTTCCAAGAGATGTCCC+CGG | 0.589943 | 1.2:-82986325 | None:intergenic |
| GACAATACTCTTTGATACAA+TGG | 0.590727 | 1.2:-82993533 | None:intergenic |
| ATTCAAAGCACGAATGCAAG+AGG | 0.591247 | 1.2:+82986420 | MS.gene065051:CDS |
| CGGTAAATAGTGATTCGGAT+AGG | 0.592307 | 1.2:+82986125 | MS.gene065051:CDS |
| AGTCCTCTTGAGGGAGACAG+AGG | 0.594083 | 1.2:+82993392 | MS.gene065051:CDS |
| CCCTTTACAGGAAACAGTGT+CGG | 0.594759 | 1.2:-82993699 | None:intergenic |
| ATTTCGAATTGGCTTTGTCG+AGG | 0.595555 | 1.2:-82989533 | None:intergenic |
| TAGTGGACCACCAATATCCA+AGG | 0.596107 | 1.2:+82989189 | MS.gene065051:CDS |
| GCAGAGCCAGTGCACATGGA+AGG | 0.596161 | 1.2:-82987711 | None:intergenic |
| ACGGTTGATCAACATCGTGC+AGG | 0.596928 | 1.2:+82993467 | MS.gene065051:CDS |
| CTTGGCAGCATCCAGGTCAG+AGG | 0.599394 | 1.2:-82996977 | None:intergenic |
| TTCTAGTATCAACTTCAGAA+GGG | 0.600671 | 1.2:-82989150 | None:intergenic |
| GGACTTTGTCAAATGGGCAG+AGG | 0.604970 | 1.2:+82986095 | MS.gene065051:CDS |
| GCTATCAAATCACCAGTTCG+AGG | 0.605287 | 1.2:-82988899 | None:intergenic |
| GATCAAACTGAAGAAACCGT+TGG | 0.606225 | 1.2:+82993572 | MS.gene065051:CDS |
| TTGGCAGCATCCAGGTCAGA+GGG | 0.607725 | 1.2:-82996976 | None:intergenic |
| CTCTGCTCGATCCATTGATG+GGG | 0.610826 | 1.2:+82987728 | MS.gene065051:CDS |
| TCAAAATCCCAAGCCTCCAA+AGG | 0.611920 | 1.2:-82993635 | None:intergenic |
| TGGGTGGAGCAAAAGGAAAG+AGG | 0.612196 | 1.2:+82997103 | MS.gene065051:CDS |
| AGTAGGTGTAGGTAAAGACC+TGG | 0.612927 | 1.2:+82997458 | MS.gene065051:CDS |
| TAGGTCTGCAAGAGTTCGTG+AGG | 0.614234 | 1.2:+82986144 | MS.gene065051:CDS |
| TTGATAAATACTAGGCCGAA+GGG | 0.615660 | 1.2:+82987541 | MS.gene065051:intron |
| CTCCATACACGTTTGCTCAG+AGG | 0.616772 | 1.2:-82993729 | None:intergenic |
| TACCAGCAATTGAAGAAACA+CGG | 0.617762 | 1.2:+82987667 | MS.gene065051:CDS |
| TCTGATCTCCCGCATACCAG+TGG | 0.619063 | 1.2:+82986378 | MS.gene065051:CDS |
| TTGCTGGAGCTACAGAGTGT+CGG | 0.619163 | 1.2:+82993761 | MS.gene065051:CDS |
| TTTACAAGATGATGAGGTTG+CGG | 0.621336 | 1.2:+82997509 | MS.gene065051:CDS |
| TCAACCGTGTCAACCATTGA+GGG | 0.622838 | 1.2:-82993452 | None:intergenic |
| CGGCATTTATCCAGAACTAG+TGG | 0.622881 | 1.2:+82993781 | MS.gene065051:CDS |
| CAGCATCCAGGTCAGAGGGA+TGG | 0.623245 | 1.2:-82996972 | None:intergenic |
| TTCATCACAATTTAAGAACG+GGG | 0.623424 | 1.2:-82989101 | None:intergenic |
| TCGCACTCGAAGAGCAAATG+TGG | 0.623799 | 1.2:+82989075 | MS.gene065051:CDS |
| AAGCCTGATCTTGCTGATGG+AGG | 0.624176 | 1.2:+82995818 | MS.gene065051:intron |
| CAACTGTCTACTTCTGCAGA+AGG | 0.624476 | 1.2:+82997249 | MS.gene065051:CDS |
| TTCTTGGTTAGACATTGATG+TGG | 0.624762 | 1.2:+82997482 | MS.gene065051:CDS |
| TGTCTGTAGATAAATACCAC+CGG | 0.626571 | 1.2:-82988855 | None:intergenic |
| TGAGCGTAAAATAAAACCAA+AGG | 0.626997 | 1.2:+82997209 | MS.gene065051:CDS |
| TCTCCGAATCCACTGGTATG+CGG | 0.628198 | 1.2:-82986387 | None:intergenic |
| ATTGCTGGCAAAGTTGGCTG+CGG | 0.628484 | 1.2:-82990611 | None:intergenic |
| AAGATTGGACCAATACTGAA+CGG | 0.628744 | 1.2:+82996997 | MS.gene065051:CDS |
| GGTGGGCCTAGACATACCTA+TGG | 0.629682 | 1.2:+82997530 | MS.gene065051:CDS |
| GTGTTGAAGAGAAGATTCAA+AGG | 0.631741 | 1.2:+82987643 | MS.gene065051:CDS |
| CTCTGAGCAAACGTGTATGG+AGG | 0.634585 | 1.2:+82993730 | MS.gene065051:CDS |
| TGGTGAAAGTAAATTAAAGG+CGG | 0.634748 | 1.2:+82989309 | MS.gene065051:CDS |
| TCTAGTATCAACTTCAGAAG+GGG | 0.634804 | 1.2:-82989149 | None:intergenic |
| AACAAAGTAGAGACTGGAGA+TGG | 0.636547 | 1.2:+82989424 | MS.gene065051:CDS |
| CGTTGAAACTGAGGAACCCA+TGG | 0.639492 | 1.2:+82997401 | MS.gene065051:CDS |
| ACCAGCAATTGAAGAAACAC+GGG | 0.640027 | 1.2:+82987668 | MS.gene065051:CDS |
| GATGGTGGTAAGGTTTGTGA+TGG | 0.640212 | 1.2:+82987621 | MS.gene065051:CDS |
| TATGCGGGAGATCAGATTAG+CGG | 0.644517 | 1.2:-82986371 | None:intergenic |
| TCTGGTGCTAATATGTTGCA+GGG | 0.644953 | 1.2:+82986190 | MS.gene065051:CDS |
| ACTTTGAGATAATCTAGTCG+GGG | 0.645712 | 1.2:-82989263 | None:intergenic |
| TTTGTCGCAAAGTCCTCTTG+AGG | 0.647090 | 1.2:+82993382 | MS.gene065051:CDS |
| CATTAATCTTCACAGAACCA+TGG | 0.649855 | 1.2:-82997562 | None:intergenic |
| ACGAGCCTCATTCAGTAAGT+GGG | 0.650960 | 1.2:+82988990 | MS.gene065051:CDS |
| AGAGACAACACCGAGGATGG+TGG | 0.651254 | 1.2:+82987606 | MS.gene065051:CDS |
| AGACTGGAGATGGTCTGCGT+AGG | 0.659070 | 1.2:+82989434 | MS.gene065051:CDS |
| GCCACCCTCAATGGTTGACA+CGG | 0.659236 | 1.2:+82993448 | MS.gene065051:CDS |
| GGTCTGCGTAGGCAGTGTCG+TGG | 0.659646 | 1.2:+82989445 | MS.gene065051:CDS |
| TGCCAAATGAAACAATAAGT+GGG | 0.662194 | 1.2:+82986848 | MS.gene065051:CDS |
| GTGAGTTAAGACAGGTCCCG+GGG | 0.666016 | 1.2:+82986308 | MS.gene065051:CDS |
| ACCATGGACAAATCATCCAT+AGG | 0.666202 | 1.2:-82997546 | None:intergenic |
| GGATGCTTTACAAGATGATG+AGG | 0.673649 | 1.2:+82997503 | MS.gene065051:CDS |
| TTGGACCAATACTGAACGGG+GGG | 0.674966 | 1.2:+82997001 | MS.gene065051:CDS |
| AAGGCAGGGAAATGGAGCCA+CGG | 0.677413 | 1.2:+82996058 | MS.gene065051:CDS |
| ACCGTGTCAACCATTGAGGG+TGG | 0.678945 | 1.2:-82993449 | None:intergenic |
| GTTCTTCTGCAAGTAACACA+AGG | 0.680779 | 1.2:+82997184 | MS.gene065051:CDS |
| GATTGGACCAATACTGAACG+GGG | 0.681882 | 1.2:+82996999 | MS.gene065051:CDS |
| GCGAGGAATCGACTTTCAAG+GGG | 0.684813 | 1.2:+82986074 | MS.gene065051:CDS |
| TTCCAGCACAGCTAGTCGCG+AGG | 0.685484 | 1.2:+82986057 | MS.gene065051:CDS |
| GAAGTGCTACTTGATGAGGT+TGG | 0.688688 | 1.2:+82997033 | MS.gene065051:CDS |
| ACTTTGTCAAATGGGCAGAG+GGG | 0.689557 | 1.2:+82986097 | MS.gene065051:CDS |
| AGTGGACCACCAATATCCAA+GGG | 0.702970 | 1.2:+82989190 | MS.gene065051:CDS |
| GACTCCACAGAAGTAGGTGT+AGG | 0.713793 | 1.2:+82997447 | MS.gene065051:CDS |
| AGGATTGGACAGAAGCAAAG+GGG | 0.717146 | 1.2:+82989333 | MS.gene065051:CDS |
| ATTGGACCAATACTGAACGG+GGG | 0.718927 | 1.2:+82997000 | MS.gene065051:CDS |
| AGGTCTGCAAGAGTTCGTGA+GGG | 0.721861 | 1.2:+82986145 | MS.gene065051:CDS |
| AAAGAATAGAGACAACACCG+AGG | 0.821156 | 1.2:+82987599 | MS.gene065051:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 82986043 | 82997575 | 82986043 | ID=MS.gene065051 |
| chr1.2 | mRNA | 82986043 | 82997575 | 82986043 | ID=MS.gene065051.t1;Parent=MS.gene065051 |
| chr1.2 | exon | 82986043 | 82986458 | 82986043 | ID=MS.gene065051.t1.exon1;Parent=MS.gene065051.t1 |
| chr1.2 | CDS | 82986043 | 82986458 | 82986043 | ID=cds.MS.gene065051.t1;Parent=MS.gene065051.t1 |
| chr1.2 | exon | 82986759 | 82986999 | 82986759 | ID=MS.gene065051.t1.exon2;Parent=MS.gene065051.t1 |
| chr1.2 | CDS | 82986759 | 82986999 | 82986759 | ID=cds.MS.gene065051.t1;Parent=MS.gene065051.t1 |
| chr1.2 | exon | 82987555 | 82987829 | 82987555 | ID=MS.gene065051.t1.exon3;Parent=MS.gene065051.t1 |
| chr1.2 | CDS | 82987555 | 82987829 | 82987555 | ID=cds.MS.gene065051.t1;Parent=MS.gene065051.t1 |
| chr1.2 | exon | 82988829 | 82989584 | 82988829 | ID=MS.gene065051.t1.exon4;Parent=MS.gene065051.t1 |
| chr1.2 | CDS | 82988829 | 82989584 | 82988829 | ID=cds.MS.gene065051.t1;Parent=MS.gene065051.t1 |
| chr1.2 | exon | 82989685 | 82989740 | 82989685 | ID=MS.gene065051.t1.exon5;Parent=MS.gene065051.t1 |
| chr1.2 | CDS | 82989685 | 82989740 | 82989685 | ID=cds.MS.gene065051.t1;Parent=MS.gene065051.t1 |
| chr1.2 | exon | 82990578 | 82990640 | 82990578 | ID=MS.gene065051.t1.exon6;Parent=MS.gene065051.t1 |
| chr1.2 | CDS | 82990578 | 82990640 | 82990578 | ID=cds.MS.gene065051.t1;Parent=MS.gene065051.t1 |
| chr1.2 | exon | 82990732 | 82990820 | 82990732 | ID=MS.gene065051.t1.exon7;Parent=MS.gene065051.t1 |
| chr1.2 | CDS | 82990732 | 82990820 | 82990732 | ID=cds.MS.gene065051.t1;Parent=MS.gene065051.t1 |
| chr1.2 | exon | 82990911 | 82990976 | 82990911 | ID=MS.gene065051.t1.exon8;Parent=MS.gene065051.t1 |
| chr1.2 | CDS | 82990911 | 82990976 | 82990911 | ID=cds.MS.gene065051.t1;Parent=MS.gene065051.t1 |
| chr1.2 | exon | 82993356 | 82993802 | 82993356 | ID=MS.gene065051.t1.exon9;Parent=MS.gene065051.t1 |
| chr1.2 | CDS | 82993356 | 82993802 | 82993356 | ID=cds.MS.gene065051.t1;Parent=MS.gene065051.t1 |
| chr1.2 | exon | 82995821 | 82995895 | 82995821 | ID=MS.gene065051.t1.exon10;Parent=MS.gene065051.t1 |
| chr1.2 | CDS | 82995821 | 82995895 | 82995821 | ID=cds.MS.gene065051.t1;Parent=MS.gene065051.t1 |
| chr1.2 | exon | 82996009 | 82996079 | 82996009 | ID=MS.gene065051.t1.exon11;Parent=MS.gene065051.t1 |
| chr1.2 | CDS | 82996009 | 82996079 | 82996009 | ID=cds.MS.gene065051.t1;Parent=MS.gene065051.t1 |
| chr1.2 | exon | 82996196 | 82996253 | 82996196 | ID=MS.gene065051.t1.exon12;Parent=MS.gene065051.t1 |
| chr1.2 | CDS | 82996196 | 82996253 | 82996196 | ID=cds.MS.gene065051.t1;Parent=MS.gene065051.t1 |
| chr1.2 | exon | 82996503 | 82996749 | 82996503 | ID=MS.gene065051.t1.exon13;Parent=MS.gene065051.t1 |
| chr1.2 | CDS | 82996503 | 82996749 | 82996503 | ID=cds.MS.gene065051.t1;Parent=MS.gene065051.t1 |
| chr1.2 | exon | 82996929 | 82997575 | 82996929 | ID=MS.gene065051.t1.exon14;Parent=MS.gene065051.t1 |
| chr1.2 | CDS | 82996929 | 82997575 | 82996929 | ID=cds.MS.gene065051.t1;Parent=MS.gene065051.t1 |
| Gene Sequence |
| Protein sequence |