AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene065170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065170.t1 MTR_2g079990 94.167 360 12 3 1 359 3 354 0.0 700
MS.gene065170.t1 MTR_2g079990 87.371 388 12 4 1 359 3 382 0.0 672
MS.gene065170.t1 MTR_8g059170 64.857 350 97 8 1 348 1 326 4.76e-149 424
MS.gene065170.t1 MTR_3g088110 66.279 172 54 2 10 178 3 173 5.85e-78 241
MS.gene065170.t1 MTR_2g080010 64.162 173 49 2 11 170 12 184 2.80e-76 239
MS.gene065170.t1 MTR_8g094580 67.702 161 47 2 12 168 5 164 2.74e-75 234
MS.gene065170.t1 MTR_4g089135 63.388 183 42 3 14 171 15 197 1.26e-74 234
MS.gene065170.t1 MTR_2157s0010 56.436 202 74 4 10 199 4 203 5.19e-74 230
MS.gene065170.t1 MTR_3g096920 66.049 162 51 2 10 168 3 163 1.69e-73 230
MS.gene065170.t1 MTR_7g085220 63.314 169 49 3 11 166 5 173 5.71e-73 230
MS.gene065170.t1 MTR_7g100990 62.130 169 58 3 5 167 2 170 1.11e-70 224
MS.gene065170.t1 MTR_4g081870 63.057 157 54 1 10 162 5 161 4.08e-70 220
MS.gene065170.t1 MTR_5g041940 63.871 155 52 1 12 162 1 155 4.41e-70 220
MS.gene065170.t1 MTR_2g093810 59.756 164 60 2 10 167 10 173 3.48e-68 217
MS.gene065170.t1 MTR_3g096920 53.769 199 51 2 10 168 3 200 2.47e-67 215
MS.gene065170.t1 MTR_2g064090 55.063 158 68 2 9 163 1 158 3.66e-60 197
MS.gene065170.t1 MTR_5g076850 51.351 185 79 2 9 191 1 176 5.97e-60 204
MS.gene065170.t1 MTR_6g084430 55.414 157 68 1 13 169 4 158 4.90e-59 194
MS.gene065170.t1 MTR_3g435150 55.090 167 73 1 11 175 13 179 3.01e-58 191
MS.gene065170.t1 MTR_6g012670 52.000 175 82 1 4 176 10 184 4.92e-58 191
MS.gene065170.t1 MTR_3g064580 50.262 191 90 3 9 196 1 189 1.06e-57 198
MS.gene065170.t1 MTR_4g108760 53.293 167 76 1 11 175 14 180 1.76e-57 191
MS.gene065170.t1 MTR_7g085260 48.792 207 86 4 12 210 15 209 8.66e-57 189
MS.gene065170.t1 MTR_6g477900 51.592 157 74 1 9 163 1 157 2.22e-56 184
MS.gene065170.t1 MTR_5g040420 52.083 192 80 6 5 185 6 196 2.29e-56 189
MS.gene065170.t1 MTR_3g109340 54.430 158 68 2 13 168 21 176 1.65e-55 186
MS.gene065170.t1 MTR_3g109340 55.000 160 65 3 13 168 21 177 2.48e-55 185
MS.gene065170.t1 MTR_4g134460 56.051 157 62 3 16 169 56 208 3.82e-55 187
MS.gene065170.t1 MTR_3g070030 45.918 196 100 2 11 203 16 208 1.46e-54 183
MS.gene065170.t1 MTR_4g035590 55.263 152 62 2 14 162 8 156 2.43e-54 182
MS.gene065170.t1 MTR_1g008740 54.037 161 66 4 13 168 12 169 3.74e-54 182
MS.gene065170.t1 MTR_1g008740 54.037 161 66 4 13 168 26 183 4.27e-54 182
MS.gene065170.t1 MTR_6g011860 52.469 162 67 2 14 165 15 176 7.27e-54 182
MS.gene065170.t1 MTR_5g021710 44.670 197 101 3 14 204 8 202 7.60e-54 181
MS.gene065170.t1 MTR_8g467490 48.168 191 87 5 16 194 16 206 1.27e-53 182
MS.gene065170.t1 MTR_2g062730 50.595 168 74 4 10 170 6 171 6.29e-53 178
MS.gene065170.t1 MTR_2g078700 55.000 160 60 3 14 165 23 178 7.75e-53 179
MS.gene065170.t1 MTR_1g096430 46.821 173 87 2 14 183 7 177 2.81e-52 176
MS.gene065170.t1 MTR_5g014300 51.786 168 67 4 9 166 1 164 3.17e-52 176
MS.gene065170.t1 MTR_8g076110 48.765 162 78 2 9 167 1 160 4.17e-52 175
MS.gene065170.t1 MTR_6g032770 46.759 216 87 6 12 211 16 219 1.68e-51 176
MS.gene065170.t1 MTR_5g090970 47.150 193 89 3 16 196 20 211 2.00e-51 174
MS.gene065170.t1 MTR_4g036030 50.658 152 70 2 14 162 7 156 2.42e-51 174
MS.gene065170.t1 MTR_8g024480 47.879 165 74 2 10 162 11 175 4.02e-51 176
MS.gene065170.t1 MTR_4g098630 44.949 198 103 3 13 205 5 201 7.74e-51 172
MS.gene065170.t1 MTR_7g005280 54.658 161 66 3 10 168 11 166 9.86e-51 170
MS.gene065170.t1 MTR_5g090970 47.150 193 88 4 16 196 20 210 1.55e-50 171
MS.gene065170.t1 MTR_2g068920 43.348 233 101 8 16 230 23 242 1.73e-50 171
MS.gene065170.t1 MTR_2g064470 44.898 196 91 5 9 199 6 189 2.84e-50 170
MS.gene065170.t1 MTR_4g101680 51.316 152 69 2 14 162 7 156 3.38e-50 172
MS.gene065170.t1 MTR_7g011130 37.452 259 139 3 11 254 16 266 1.56e-49 170
MS.gene065170.t1 MTR_5g012080 37.809 283 141 10 14 276 7 274 3.10e-49 169
MS.gene065170.t1 MTR_2g068880 49.133 173 72 4 16 172 24 196 1.52e-48 166
MS.gene065170.t1 MTR_8g094580 69.091 110 29 2 63 168 2 110 1.90e-48 163
MS.gene065170.t1 MTR_7g011120 46.108 167 81 1 11 168 5 171 3.14e-48 165
MS.gene065170.t1 MTR_3g093040 48.148 162 78 3 9 166 103 262 7.54e-47 162
MS.gene065170.t1 MTR_1g069805 43.602 211 92 7 1 194 1 201 7.66e-47 160
MS.gene065170.t1 MTR_3g096140 46.309 149 78 1 16 162 9 157 1.12e-46 160
MS.gene065170.t1 MTR_5g069030 50.000 164 77 2 4 162 12 175 2.10e-46 167
MS.gene065170.t1 MTR_3g096140 46.309 149 78 1 16 162 9 157 6.97e-46 160
MS.gene065170.t1 MTR_8g063550 42.614 176 96 2 9 182 1 173 7.91e-46 160
MS.gene065170.t1 MTR_2g086880 48.408 157 72 3 9 164 13 161 1.29e-45 163
MS.gene065170.t1 MTR_2g086880 48.408 157 72 3 9 164 13 161 1.40e-45 164
MS.gene065170.t1 MTR_7g097090 48.148 162 74 3 1 160 1 154 1.70e-45 157
MS.gene065170.t1 MTR_8g063550 42.614 176 96 2 9 182 1 173 2.69e-45 161
MS.gene065170.t1 MTR_3g093050 48.750 160 80 1 9 166 17 176 3.18e-45 163
MS.gene065170.t1 MTR_8g063550 42.614 176 96 2 9 182 1 173 3.90e-45 160
MS.gene065170.t1 MTR_3g093050 48.750 160 80 1 9 166 17 176 5.27e-45 163
MS.gene065170.t1 MTR_1g090723 48.718 156 77 2 16 168 10 165 8.51e-45 163
MS.gene065170.t1 MTR_1g097300 45.283 159 85 1 12 168 17 175 1.47e-44 161
MS.gene065170.t1 MTR_3g116070 52.857 140 63 2 3 139 12 151 1.51e-44 157
MS.gene065170.t1 MTR_1g090720 48.521 169 76 3 13 173 41 206 2.72e-44 159
MS.gene065170.t1 MTR_0036s0150 36.842 247 138 6 16 255 7 242 3.02e-44 160
MS.gene065170.t1 MTR_4g075980 49.375 160 72 4 11 167 13 166 3.95e-44 154
MS.gene065170.t1 MTR_1g090723 48.718 156 76 3 16 168 10 164 1.43e-43 159
MS.gene065170.t1 MTR_1g090723 48.718 156 76 3 16 168 10 164 1.86e-43 159
MS.gene065170.t1 MTR_8g093580 41.477 176 98 2 9 182 1 173 2.08e-43 157
MS.gene065170.t1 MTR_3g098810 47.531 162 73 3 14 165 14 173 3.21e-41 145
MS.gene065170.t1 MTR_8g099750 45.000 160 79 3 14 166 14 171 6.78e-41 144
MS.gene065170.t1 MTR_3g070040 42.105 190 100 5 18 203 12 195 2.46e-40 145
MS.gene065170.t1 MTR_3g096140 44.030 134 73 1 31 162 3 136 1.40e-37 138
MS.gene065170.t1 MTR_3g098810 51.515 132 58 2 14 141 14 143 1.41e-36 130
MS.gene065170.t1 MTR_4g094302 40.123 162 81 3 14 167 11 164 9.92e-36 129
MS.gene065170.t1 MTR_2g086690 45.570 158 72 5 15 160 5 160 2.00e-35 130
MS.gene065170.t1 MTR_8g023840 46.104 154 66 6 14 159 11 155 9.87e-35 132
MS.gene065170.t1 MTR_7g105170 36.598 194 103 8 14 189 4 195 1.33e-34 128
MS.gene065170.t1 MTR_4g052620 43.038 158 77 6 14 160 5 160 2.03e-33 125
MS.gene065170.t1 MTR_4g094302 44.531 128 61 2 14 139 11 130 8.73e-33 120
MS.gene065170.t1 MTR_8g023900 36.123 227 113 11 1 206 173 388 2.57e-31 123
MS.gene065170.t1 MTR_8g023900 40.252 159 86 5 9 162 7 161 2.89e-29 117
MS.gene065170.t1 MTR_8g023930 35.545 211 110 10 14 215 24 217 1.30e-29 119
MS.gene065170.t1 MTR_8g023860 40.909 154 74 6 14 159 12 156 1.89e-29 117
MS.gene065170.t1 MTR_8g093790 35.294 204 107 7 10 213 6 184 2.21e-25 101
MS.gene065170.t1 MTR_8g023880 39.053 169 74 7 13 162 6 164 5.35e-25 102
MS.gene065170.t1 MTR_7g070140 56.790 81 33 1 67 145 17 97 8.64e-23 93.2
MS.gene065170.t1 MTR_3g096400 30.952 210 117 6 12 207 5 200 2.85e-21 90.9
MS.gene065170.t1 MTR_7g083360 31.206 141 88 5 10 144 6 143 3.47e-18 80.9
MS.gene065170.t1 MTR_7g083330 32.558 129 81 4 12 137 16 141 6.01e-14 70.1
MS.gene065170.t1 MTR_7g070150 53.448 58 24 1 111 168 9 63 3.89e-13 65.1
MS.gene065170.t1 MTR_8g102240 32.895 152 76 5 12 139 45 194 5.36e-12 67.0
MS.gene065170.t1 MTR_8g102240 32.895 152 76 5 12 139 45 194 5.37e-12 67.0
MS.gene065170.t1 MTR_7g116460 35.714 154 83 9 20 163 11 158 6.41e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065170.t1 AT4G27410 78.636 220 46 1 1 220 1 219 8.66e-124 358
MS.gene065170.t1 AT1G52890 57.550 351 109 11 1 346 1 316 1.12e-120 351
MS.gene065170.t1 AT4G27410 72.996 237 46 2 1 220 1 236 2.67e-119 347
MS.gene065170.t1 AT3G15500 69.323 251 71 4 1 248 1 248 6.27e-118 344
MS.gene065170.t1 AT3G04070 62.694 193 57 5 6 185 4 194 2.49e-76 239
MS.gene065170.t1 AT1G01720 65.341 176 55 3 12 182 5 179 5.06e-76 236
MS.gene065170.t1 AT5G63790 59.162 191 69 3 10 195 46 232 2.81e-74 233
MS.gene065170.t1 AT5G63790 59.162 191 69 3 10 195 56 242 4.56e-74 232
MS.gene065170.t1 AT5G08790 64.072 167 54 2 10 171 3 168 5.34e-74 231
MS.gene065170.t1 AT1G61110 66.477 176 43 4 14 175 16 189 5.27e-73 229
MS.gene065170.t1 AT1G77450 65.432 162 52 2 10 168 6 166 7.22e-73 227
MS.gene065170.t1 AT3G04070 57.895 209 57 6 6 185 4 210 1.92e-72 229
MS.gene065170.t1 AT1G69490 62.963 162 56 1 10 167 5 166 5.33e-71 223
MS.gene065170.t1 AT3G15510 64.417 163 45 3 18 167 21 183 1.06e-69 223
MS.gene065170.t1 AT3G18400 44.444 243 125 5 14 249 5 244 3.07e-63 204
MS.gene065170.t1 AT1G52880 63.125 160 47 2 18 165 21 180 3.52e-61 199
MS.gene065170.t1 AT1G65910 48.990 198 96 3 9 202 1 197 6.78e-59 201
MS.gene065170.t1 AT5G07680 52.105 190 86 3 1 188 4 190 8.33e-59 193
MS.gene065170.t1 AT3G17730 46.114 193 92 3 9 198 1 184 2.86e-58 189
MS.gene065170.t1 AT5G61430 45.726 234 108 5 11 225 13 246 3.64e-58 192
MS.gene065170.t1 AT2G02450 52.874 174 79 2 16 188 53 224 1.20e-57 192
MS.gene065170.t1 AT2G02450 52.874 174 79 2 16 188 53 224 1.97e-57 192
MS.gene065170.t1 AT5G07680 53.631 179 78 3 12 188 1 176 2.17e-57 189
MS.gene065170.t1 AT2G24430 55.625 160 68 2 13 170 15 173 2.95e-57 189
MS.gene065170.t1 AT2G24430 55.625 160 68 2 13 170 15 173 2.95e-57 189
MS.gene065170.t1 AT3G03200 48.691 191 91 3 9 196 1 187 7.80e-57 192
MS.gene065170.t1 AT5G18270 49.505 202 95 4 12 210 19 216 2.12e-56 187
MS.gene065170.t1 AT5G17260 53.049 164 74 2 9 169 1 164 3.23e-56 191
MS.gene065170.t1 AT5G39610 49.749 199 84 4 11 195 17 213 9.75e-56 184
MS.gene065170.t1 AT1G26870 50.811 185 79 4 5 177 7 191 1.27e-55 187
MS.gene065170.t1 AT5G18270 48.515 202 97 4 12 210 19 216 1.73e-55 185
MS.gene065170.t1 AT2G43000 54.194 155 70 1 16 169 20 174 1.15e-54 181
MS.gene065170.t1 AT5G39820 49.730 185 68 4 16 175 22 206 1.34e-54 182
MS.gene065170.t1 AT3G04060 49.505 202 90 5 12 210 18 210 2.84e-54 182
MS.gene065170.t1 AT2G33480 57.143 154 63 1 12 165 13 163 7.66e-54 179
MS.gene065170.t1 AT4G10350 51.974 152 70 1 14 162 9 160 1.17e-53 180
MS.gene065170.t1 AT5G53950 56.051 157 65 2 14 166 17 173 4.94e-53 179
MS.gene065170.t1 AT2G18060 48.171 164 80 2 7 167 2 163 5.49e-53 179
MS.gene065170.t1 AT2G18060 48.171 164 80 2 7 167 2 163 5.49e-53 179
MS.gene065170.t1 AT1G71930 42.640 197 103 3 7 195 2 196 7.41e-53 177
MS.gene065170.t1 AT1G71930 42.640 197 103 3 7 195 2 196 7.41e-53 177
MS.gene065170.t1 AT2G33480 57.143 154 61 2 12 165 13 161 7.53e-53 176
MS.gene065170.t1 AT1G33280 52.632 152 66 2 14 162 8 156 1.86e-52 176
MS.gene065170.t1 AT1G79580 54.140 157 65 3 10 162 13 166 2.25e-52 178
MS.gene065170.t1 AT1G79580 54.140 157 65 3 10 162 13 166 2.25e-52 178
MS.gene065170.t1 AT1G79580 54.140 157 65 3 10 162 13 166 2.25e-52 178
MS.gene065170.t1 AT1G79580 54.140 157 65 3 10 162 13 166 2.25e-52 178
MS.gene065170.t1 AT1G79580 54.140 157 65 3 10 162 13 166 2.25e-52 178
MS.gene065170.t1 AT1G54330 52.866 157 69 2 9 163 1 154 3.67e-52 175
MS.gene065170.t1 AT5G46590 55.195 154 65 3 14 163 6 159 4.13e-52 175
MS.gene065170.t1 AT3G29035 53.750 160 72 1 11 168 21 180 6.24e-52 175
MS.gene065170.t1 AT5G13180 56.604 159 63 4 12 168 12 166 8.58e-52 172
MS.gene065170.t1 AT3G15170 53.896 154 67 2 14 163 20 173 3.15e-51 173
MS.gene065170.t1 AT4G17980 53.750 160 60 4 14 163 6 161 5.10e-51 171
MS.gene065170.t1 AT4G17980 52.121 165 65 4 9 163 1 161 7.19e-51 171
MS.gene065170.t1 AT1G32510 43.182 220 100 5 14 208 6 225 9.89e-51 171
MS.gene065170.t1 AT4G36160 51.634 153 69 2 13 162 13 163 1.26e-50 173
MS.gene065170.t1 AT4G36160 51.634 153 69 2 13 162 9 159 1.32e-50 173
MS.gene065170.t1 AT4G36160 51.634 153 69 2 13 162 9 159 1.32e-50 173
MS.gene065170.t1 AT1G56010 46.875 160 81 2 9 164 14 173 1.74e-50 171
MS.gene065170.t1 AT3G12977 46.541 159 84 1 9 166 13 171 1.97e-50 170
MS.gene065170.t1 AT5G66300 50.000 156 74 2 13 165 11 165 2.07e-50 170
MS.gene065170.t1 AT1G12260 50.641 156 72 2 14 166 7 160 2.39e-50 172
MS.gene065170.t1 AT1G12260 50.641 156 72 2 14 166 7 160 3.28e-50 173
MS.gene065170.t1 AT3G10480 50.633 158 76 1 9 164 22 179 3.43e-50 174
MS.gene065170.t1 AT1G76420 48.837 172 77 3 1 162 1 171 4.62e-50 171
MS.gene065170.t1 AT5G62380 51.974 152 68 2 14 162 7 156 8.36e-50 171
MS.gene065170.t1 AT5G62380 51.974 152 68 2 14 162 7 156 8.36e-50 171
MS.gene065170.t1 AT1G33060 48.466 163 82 1 9 169 19 181 1.57e-49 176
MS.gene065170.t1 AT1G33060 48.466 163 82 1 9 169 19 181 1.64e-49 176
MS.gene065170.t1 AT1G32770 45.604 182 85 3 10 177 12 193 2.31e-49 169
MS.gene065170.t1 AT1G62700 50.641 156 72 2 14 166 7 160 2.84e-49 170
MS.gene065170.t1 AT1G62700 50.641 156 72 2 14 166 7 160 2.84e-49 170
MS.gene065170.t1 AT5G46590 56.028 141 59 2 14 151 6 146 3.29e-49 167
MS.gene065170.t1 AT2G46770 41.038 212 106 3 10 202 12 223 8.55e-49 168
MS.gene065170.t1 AT3G10480 50.314 159 76 2 9 164 22 180 9.96e-49 170
MS.gene065170.t1 AT3G10500 50.000 158 77 1 13 168 8 165 1.46e-48 172
MS.gene065170.t1 AT4G35580 45.408 196 99 3 13 206 8 197 1.92e-48 171
MS.gene065170.t1 AT4G35580 45.408 196 99 3 13 206 8 197 1.92e-48 171
MS.gene065170.t1 AT4G35580 45.408 196 99 3 13 206 8 197 2.03e-48 171
MS.gene065170.t1 AT5G24590 42.929 198 105 3 4 198 3 195 4.90e-48 168
MS.gene065170.t1 AT5G04410 50.000 158 77 1 13 168 8 165 5.57e-48 171
MS.gene065170.t1 AT3G10490 50.323 155 74 2 13 164 26 180 8.06e-48 162
MS.gene065170.t1 AT3G10490 50.000 158 70 3 13 164 26 180 3.91e-47 166
MS.gene065170.t1 AT3G61910 43.478 184 88 3 10 177 7 190 1.44e-46 161
MS.gene065170.t1 AT2G17040 40.553 217 118 4 16 229 8 216 5.40e-46 158
MS.gene065170.t1 AT3G12910 41.176 238 106 8 4 212 15 247 4.57e-45 157
MS.gene065170.t1 AT3G49530 47.134 157 80 2 9 162 8 164 5.59e-45 159
MS.gene065170.t1 AT1G34180 45.161 155 83 1 16 168 18 172 9.15e-45 159
MS.gene065170.t1 AT3G49530 47.134 157 80 2 9 162 8 164 1.43e-44 159
MS.gene065170.t1 AT2G27300 38.009 221 110 5 9 210 9 221 3.95e-44 155
MS.gene065170.t1 AT1G34180 45.161 155 83 1 16 168 18 172 4.96e-44 160
MS.gene065170.t1 AT5G64060 44.586 157 85 1 9 163 1 157 5.31e-44 155
MS.gene065170.t1 AT3G10480 43.085 188 71 3 13 164 26 213 6.12e-44 159
MS.gene065170.t1 AT1G34190 43.871 155 85 1 16 168 18 172 6.33e-44 159
MS.gene065170.t1 AT5G22290 41.304 184 92 5 16 192 23 197 8.34e-44 154
MS.gene065170.t1 AT1G34180 42.515 167 82 1 16 168 18 184 2.17e-42 153
MS.gene065170.t1 AT4G28530 45.556 180 72 6 1 162 1 172 4.01e-42 150
MS.gene065170.t1 AT3G44290 43.396 159 78 3 16 169 16 167 4.22e-42 147
MS.gene065170.t1 AT1G34180 42.515 167 82 1 16 168 18 184 1.15e-41 153
MS.gene065170.t1 AT3G44290 43.396 159 78 3 16 169 16 167 2.66e-41 148
MS.gene065170.t1 AT5G09330 42.675 157 88 1 9 163 1 157 5.80e-41 150
MS.gene065170.t1 AT5G09330 42.675 157 88 1 9 163 1 157 5.80e-41 150
MS.gene065170.t1 AT5G09330 42.675 157 88 1 9 163 1 157 5.80e-41 150
MS.gene065170.t1 AT5G09330 42.675 157 88 1 9 163 1 157 5.80e-41 150
MS.gene065170.t1 AT5G09330 42.675 157 88 1 9 163 1 157 5.80e-41 150
MS.gene065170.t1 AT1G32870 50.314 159 73 3 14 168 10 166 8.72e-41 150
MS.gene065170.t1 AT1G32870 50.314 159 73 3 14 168 10 166 9.35e-41 150
MS.gene065170.t1 AT1G32870 50.314 159 73 3 14 168 46 202 1.62e-40 150
MS.gene065170.t1 AT5G61430 42.857 182 85 5 63 225 2 183 1.85e-35 130
MS.gene065170.t1 AT4G10350 55.208 96 43 0 67 162 18 113 1.19e-33 126
MS.gene065170.t1 AT1G56010 51.429 105 48 1 63 164 2 106 1.97e-33 125
MS.gene065170.t1 AT5G64530 39.306 173 77 4 12 168 1 161 3.44e-33 122
MS.gene065170.t1 AT2G33480 57.576 99 42 0 67 165 8 106 6.36e-33 122
MS.gene065170.t1 AT3G44350 40.491 163 86 5 14 167 5 165 1.02e-32 122
MS.gene065170.t1 AT3G12977 51.429 105 50 1 63 166 14 118 1.97e-32 121
MS.gene065170.t1 AT5G22380 37.245 196 111 8 17 201 8 202 6.89e-31 117
MS.gene065170.t1 AT5G04395 42.857 147 66 3 10 139 24 169 1.46e-30 115
MS.gene065170.t1 AT5G64530 44.697 132 59 3 12 141 1 120 4.05e-30 113
MS.gene065170.t1 AT3G44350 42.029 138 70 4 14 143 5 140 1.72e-29 111
MS.gene065170.t1 AT4G01550 37.714 175 90 7 17 182 7 171 1.13e-26 110
MS.gene065170.t1 AT3G04420 41.732 127 70 2 15 137 4 130 3.04e-26 106
MS.gene065170.t1 AT2G43000 50.526 95 46 1 76 169 2 96 3.90e-26 103
MS.gene065170.t1 AT4G28530 34.831 178 57 4 1 162 1 135 5.45e-26 106
MS.gene065170.t1 AT3G04420 41.732 127 70 2 15 137 4 130 6.37e-26 106
MS.gene065170.t1 AT4G01520 35.632 174 97 6 15 178 5 173 8.68e-25 102
MS.gene065170.t1 AT4G27410 62.069 87 32 1 134 220 1 86 2.15e-24 98.2
MS.gene065170.t1 AT4G01540 36.047 172 95 6 17 178 7 173 2.55e-24 103
MS.gene065170.t1 AT4G01540 36.047 172 95 6 17 178 7 173 2.79e-24 102
MS.gene065170.t1 AT4G01540 36.257 171 94 6 17 177 7 172 4.31e-24 103
MS.gene065170.t1 AT4G01540 36.257 171 94 6 17 177 7 172 4.47e-24 102
MS.gene065170.t1 AT1G02230 41.538 130 66 5 15 137 4 130 3.15e-23 99.8
MS.gene065170.t1 AT1G02250 35.503 169 95 5 12 173 1 162 3.25e-22 96.7
MS.gene065170.t1 AT1G02220 37.692 130 74 3 12 137 1 127 4.56e-21 94.0
MS.gene065170.t1 AT3G56530 36.601 153 92 4 11 160 49 199 1.34e-20 91.7
MS.gene065170.t1 AT3G10490 49.367 79 39 1 87 164 2 80 2.55e-20 91.3
MS.gene065170.t1 AT3G10490 49.367 79 39 1 87 164 2 80 2.55e-20 91.3
MS.gene065170.t1 AT2G18060 47.368 76 38 1 92 167 2 75 9.28e-19 85.5
MS.gene065170.t1 AT5G50820 37.226 137 70 5 12 142 15 141 4.24e-18 82.0
MS.gene065170.t1 AT3G55210 34.161 161 88 5 14 160 11 167 6.58e-18 83.2
MS.gene065170.t1 AT5G22290 39.623 106 49 4 93 192 2 98 3.15e-17 80.5
MS.gene065170.t1 AT1G01010 34.146 164 85 8 17 166 6 160 3.17e-17 82.8
MS.gene065170.t1 AT5G14000 31.646 158 97 4 12 165 13 163 2.47e-16 77.4
MS.gene065170.t1 AT5G14000 34.615 130 81 2 12 139 13 140 9.63e-16 74.3
MS.gene065170.t1 AT3G04430 35.606 132 71 5 20 138 6 136 4.46e-12 65.1
MS.gene065170.t1 AT4G28500 34.641 153 80 6 14 148 59 209 3.08e-11 63.9
MS.gene065170.t1 AT4G29230 31.210 157 81 5 8 139 42 196 5.03e-11 64.3

Find 83 sgRNAs with CRISPR-Local

Find 121 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAAAGGCACCAAAACTAAT+TGG 0.246600 2.4:-17780023 MS.gene065170:CDS
CGGTTGACCCGTTTGGGTTT+AGG 0.268222 2.4:-17778809 MS.gene065170:CDS
CTATTTGGCCTTGTCCCATT+TGG 0.279664 2.4:+17780156 None:intergenic
CCAGATCCAGCTACTCTATT+TGG 0.287866 2.4:+17780141 None:intergenic
CCGGTTCAACCAGTTGGATT+TGG 0.292468 2.4:-17778783 MS.gene065170:CDS
CTGCTTGAAACGACGCCATT+TGG 0.294519 2.4:+17779317 None:intergenic
CGCTGCAAATAACAATTTCA+TGG 0.297224 2.4:-17779117 MS.gene065170:CDS
TCAGCTTCTCTTCTTCTTGT+TGG 0.299050 2.4:+17779156 None:intergenic
ATGCATAATCCAATTAGTTT+TGG 0.307345 2.4:+17780014 None:intergenic
CTAATCCGGTTGACCCGTTT+GGG 0.322735 2.4:-17778815 MS.gene065170:CDS
TTTGGATACTTCCTATCTCT+TGG 0.340923 2.4:+17780174 None:intergenic
ATTGGACTCTTCCGTTATTA+CGG 0.356362 2.4:-17778970 MS.gene065170:CDS
ACTAATCCGGTTGACCCGTT+TGG 0.373818 2.4:-17778816 MS.gene065170:CDS
GAAACGACGCCATTTGGAAT+AGG 0.376235 2.4:+17779323 None:intergenic
CCAAATCCAACTGGTTGAAC+CGG 0.379491 2.4:+17778783 None:intergenic
AACCAAGTTGAGAATTCGTC+TGG 0.381998 2.4:-17778885 MS.gene065170:CDS
CCAAATAGAGTAGCTGGATC+TGG 0.388149 2.4:-17780141 MS.gene065170:CDS
TGTCCCCACATTATGTCAAT+TGG 0.390928 2.4:-17778988 MS.gene065170:CDS
CTTCCTATCCGGTTCATTGT+TGG 0.391276 2.4:+17778757 None:intergenic
TTGAATTGCAGCTAGATGAT+TGG 0.399386 2.4:-17779388 MS.gene065170:intron
CCCGTTTGGGTTTAGGTACC+CGG 0.405638 2.4:-17778802 MS.gene065170:CDS
TGAATTGCAGCTAGATGATT+GGG 0.406156 2.4:-17779387 MS.gene065170:intron
ACAAATGAAGGTAGAAAAGT+TGG 0.415542 2.4:-17780084 MS.gene065170:CDS
CTAAACCCAAACGGGTCAAC+CGG 0.415585 2.4:+17778810 None:intergenic
ATTTCTTTAGTCCAAGAGAT+AGG 0.426397 2.4:-17780185 MS.gene065170:CDS
CAAATAACAATTTCATGGAT+TGG 0.437272 2.4:-17779112 MS.gene065170:CDS
GAGTAGCTGGATCTGGGTAT+TGG 0.458403 2.4:-17780134 MS.gene065170:CDS
TCCTCTTCAGTCGGATGCAC+GGG 0.469154 2.4:+17778930 None:intergenic
AGAGATAGGAAGTATCCAAA+TGG 0.473419 2.4:-17780171 MS.gene065170:CDS
TGTTGGAATCCAAATCCAAC+TGG 0.474499 2.4:+17778774 None:intergenic
ACAAGGCCAAATAGAGTAGC+TGG 0.476630 2.4:-17780147 MS.gene065170:CDS
TATGTTGGTAAAGCTCCTAA+AGG 0.483857 2.4:-17780039 MS.gene065170:CDS
CCGGGTACCTAAACCCAAAC+GGG 0.483949 2.4:+17778802 None:intergenic
TGGGGACAGAAGGGACATAA+AGG 0.491862 2.4:+17779003 None:intergenic
ACCGGGTACCTAAACCCAAA+CGG 0.492810 2.4:+17778801 None:intergenic
AAGCAATGGTCGTCAATTTG+TGG 0.495194 2.4:+17779221 None:intergenic
AACAAGAAGCTCTTCATCAG+TGG 0.495470 2.4:+17780447 None:intergenic
ATCTCTACAAATTCGACCCA+TGG 0.496775 2.4:-17780363 MS.gene065170:CDS
GACAAGATTATAACAAATGA+AGG 0.510810 2.4:-17780096 MS.gene065170:CDS
TATAATCTTGTCTGTTCCAG+TGG 0.510918 2.4:+17780107 None:intergenic
TGACATAATGTGGGGACAGA+AGG 0.514449 2.4:+17778993 None:intergenic
CAAATAGAGTAGCTGGATCT+GGG 0.514453 2.4:-17780140 MS.gene065170:CDS
TATCTATGTCGTAAAGTAGC+TGG 0.519439 2.4:-17780421 MS.gene065170:CDS
AGAGTCCAATTGACATAATG+TGG 0.520252 2.4:+17778983 None:intergenic
TTCAAGAACGTCGTCGAGGT+GGG 0.522480 2.4:+17779250 None:intergenic
AACTTACTTGGAAGAACCCA+TGG 0.526899 2.4:+17780346 None:intergenic
CTCCTCTTCAGTCGGATGCA+CGG 0.528695 2.4:+17778929 None:intergenic
GAGATAGGAAGTATCCAAAT+GGG 0.536430 2.4:-17780170 MS.gene065170:CDS
ACCCAGACGAATTCTCAACT+TGG 0.539808 2.4:+17778883 None:intergenic
AGGAATGGGATACACTAATC+CGG 0.545779 2.4:-17778829 MS.gene065170:CDS
ATTCAAGAACGTCGTCGAGG+TGG 0.545842 2.4:+17779249 None:intergenic
CTTTGAACCTCCTCTTCAGT+CGG 0.546459 2.4:+17778921 None:intergenic
TCTGGGTATTGGAAAGCCAC+TGG 0.550772 2.4:-17780123 MS.gene065170:CDS
CACGTGGCAGCTTGAAGCAA+TGG 0.554810 2.4:+17779207 None:intergenic
GCACAATTGAGTTTACCTCC+TGG 0.560444 2.4:-17780484 MS.gene065170:CDS
CAAATCCAACTGGTTGAACC+GGG 0.562369 2.4:+17778784 None:intergenic
ACAAGAAGCTCTTCATCAGT+GGG 0.569952 2.4:+17780448 None:intergenic
GACATAATGTGGGGACAGAA+GGG 0.579791 2.4:+17778994 None:intergenic
TTTCAAGACGGTCAAACTCA+AGG 0.582786 2.4:-17779053 MS.gene065170:CDS
GGTAAACTCAATTGTGCAAG+AGG 0.592070 2.4:+17780490 None:intergenic
GAGTCCAATTGACATAATGT+GGG 0.603037 2.4:+17778984 None:intergenic
AGGTACCCGGTTCAACCAGT+TGG 0.603748 2.4:-17778789 MS.gene065170:CDS
CTGAAGAGGAGGTTCAAAGT+GGG 0.606883 2.4:-17778917 MS.gene065170:CDS
TCTCTACAAATTCGACCCAT+GGG 0.608644 2.4:-17780362 MS.gene065170:CDS
ACCAAGTTGAGAATTCGTCT+GGG 0.609603 2.4:-17778884 MS.gene065170:CDS
ACGTGTCAACTCGCTAAGAA+CGG 0.615896 2.4:-17779189 MS.gene065170:CDS
GTGGGGTAAAATCGAAAACC+AGG 0.620046 2.4:+17780466 None:intergenic
ACCCGTGCATCCGACTGAAG+AGG 0.627654 2.4:-17778931 MS.gene065170:CDS
CGTGCATCCGACTGAAGAGG+AGG 0.634276 2.4:-17778928 MS.gene065170:CDS
GGAAGTATCCAAATGGGACA+AGG 0.639297 2.4:-17780164 MS.gene065170:CDS
ACTGAAGAGGAGGTTCAAAG+TGG 0.641217 2.4:-17778918 MS.gene065170:CDS
GTGATTCAAGAACGTCGTCG+AGG 0.650602 2.4:+17779246 None:intergenic
GACTCTTCACGAAACAACGG+TGG 0.660789 2.4:-17779976 MS.gene065170:CDS
GTTCTTAGCGAGTTGACACG+TGG 0.662417 2.4:+17779191 None:intergenic
CTTGACTCTTCACGAAACAA+CGG 0.662587 2.4:-17779979 MS.gene065170:CDS
TGAAGAGGAGGTTCAAAGTG+GGG 0.669043 2.4:-17778916 MS.gene065170:CDS
GAATACACTCAATACAGCAA+CGG 0.669213 2.4:-17779293 MS.gene065170:CDS
ACAGTAACAGGGTTTCAAGA+CGG 0.683973 2.4:-17779065 MS.gene065170:CDS
ACGAAACAACGGTGGCACCA+AGG 0.687136 2.4:-17779968 MS.gene065170:intron
ACTTACTTGGAAGAACCCAT+GGG 0.692202 2.4:+17780347 None:intergenic
AGTCCAATTGACATAATGTG+GGG 0.700465 2.4:+17778985 None:intergenic
GGGTAAAATCGAAAACCAGG+AGG 0.741080 2.4:+17780469 None:intergenic
CAAGAAGCTCTTCATCAGTG+GGG 0.743838 2.4:+17780449 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTTAATATGAATAAAACAT+AGG + chr2.4:17779023-17779042 None:intergenic 15.0%
!! GAATTGTGAAATAAATAATA+TGG + chr2.4:17779751-17779770 None:intergenic 15.0%
!!! TATTACAAAGAATTTTATCT+AGG - chr2.4:17779453-17779472 MS.gene065170:intron 15.0%
!!! TTAAAAAAGAGTTTGATAAT+TGG + chr2.4:17779719-17779738 None:intergenic 15.0%
!! AAATAAATAATATGGTGACA+AGG + chr2.4:17779743-17779762 None:intergenic 20.0%
!! AATTATCCCATAAAACAATT+TGG + chr2.4:17779835-17779854 None:intergenic 20.0%
!! GTCAATATTTGATATTTCAA+AGG - chr2.4:17779578-17779597 MS.gene065170:intron 20.0%
!!! AGGAAGTGAATATTTTAAAA+TGG + chr2.4:17779787-17779806 None:intergenic 20.0%
!!! ATATTTTAAAATGGAACAAG+AGG + chr2.4:17779778-17779797 None:intergenic 20.0%
!!! GATTGAACAACAAAATTTTT+AGG + chr2.4:17779663-17779682 None:intergenic 20.0%
!!! GTTTTACCAAATTGTTTTAT+GGG - chr2.4:17779826-17779845 MS.gene065170:intron 20.0%
!!! TGTTTTACCAAATTGTTTTA+TGG - chr2.4:17779825-17779844 MS.gene065170:intron 20.0%
! ATGAATGTCATATAATACCT+TGG + chr2.4:17779333-17779352 None:intergenic 25.0%
! CAAATAACAATTTCATGGAT+TGG - chr2.4:17780169-17780188 MS.gene065170:CDS 25.0%
! GACAAGATTATAACAAATGA+AGG - chr2.4:17779185-17779204 MS.gene065170:CDS 25.0%
! TTTAAAAATTGGGTGATACA+TGG - chr2.4:17779527-17779546 MS.gene065170:intron 25.0%
!! AAATGATTTTACTCAAGGAA+TGG - chr2.4:17780437-17780456 MS.gene065170:CDS 25.0%
!! AATGATTTTACTCAAGGAAT+GGG - chr2.4:17780438-17780457 MS.gene065170:CDS 25.0%
!!! AAAGCACTTGTTTTTTATGT+TGG - chr2.4:17779227-17779246 MS.gene065170:CDS 25.0%
!!! ATGCATAATCCAATTAGTTT+TGG + chr2.4:17779270-17779289 None:intergenic 25.0%
ACAAATGAAGGTAGAAAAGT+TGG - chr2.4:17779197-17779216 MS.gene065170:CDS 30.0%
ATTTCTTTAGTCCAAGAGAT+AGG - chr2.4:17779096-17779115 MS.gene065170:CDS 30.0%
CAATTTGGTAAAACAGCAAA+AGG + chr2.4:17779820-17779839 None:intergenic 30.0%
CGTTGTGAAATTAACTTACT+TGG + chr2.4:17778950-17778969 None:intergenic 30.0%
TAGGCTGATGATTTGAAAAT+GGG - chr2.4:17779472-17779491 MS.gene065170:intron 30.0%
! AAGAGTTTGATAATTGGCAA+AGG + chr2.4:17779713-17779732 None:intergenic 30.0%
! AGAGTTTGATAATTGGCAAA+GGG + chr2.4:17779712-17779731 None:intergenic 30.0%
! CAAGGAATGATGAATTTTAG+TGG - chr2.4:17780246-17780265 MS.gene065170:intron 30.0%
! GGTTCAAATGATTTTACTCA+AGG - chr2.4:17780432-17780451 MS.gene065170:CDS 30.0%
!! GTGATTAATTTGTGTAGGTA+AGG - chr2.4:17779049-17779068 MS.gene065170:CDS 30.0%
!! TGTGTGTGATTAATTTGTGT+AGG - chr2.4:17779044-17779063 MS.gene065170:CDS 30.0%
!!! CAATTTTTGGTGAGAAAGAA+TGG - chr2.4:17779072-17779091 MS.gene065170:CDS 30.0%
AGAGTCCAATTGACATAATG+TGG + chr2.4:17780301-17780320 None:intergenic 35.0%
AGTCCAATTGACATAATGTG+GGG + chr2.4:17780299-17780318 None:intergenic 35.0%
ATTGGACTCTTCCGTTATTA+CGG - chr2.4:17780311-17780330 MS.gene065170:intron 35.0%
CGCTGCAAATAACAATTTCA+TGG - chr2.4:17780164-17780183 MS.gene065170:CDS 35.0%
CTAGGCTGATGATTTGAAAA+TGG - chr2.4:17779471-17779490 MS.gene065170:intron 35.0%
GAATACACTCAATACAGCAA+CGG - chr2.4:17779988-17780007 MS.gene065170:CDS 35.0%
GAGTCCAATTGACATAATGT+GGG + chr2.4:17780300-17780319 None:intergenic 35.0%
GCACAAAAACCTATTCCAAA+TGG - chr2.4:17779949-17779968 MS.gene065170:intron 35.0%
TATAATCTTGTCTGTTCCAG+TGG + chr2.4:17779177-17779196 None:intergenic 35.0%
TATCTATGTCGTAAAGTAGC+TGG - chr2.4:17778860-17778879 MS.gene065170:CDS 35.0%
TGAATTGCAGCTAGATGATT+GGG - chr2.4:17779894-17779913 MS.gene065170:intron 35.0%
TTGAATTGCAGCTAGATGAT+TGG - chr2.4:17779893-17779912 MS.gene065170:intron 35.0%
TTTGGATACTTCCTATCTCT+TGG + chr2.4:17779110-17779129 None:intergenic 35.0%
! CGATTTTGAACACAGTAACA+GGG - chr2.4:17780205-17780224 MS.gene065170:CDS 35.0%
! TATGTTGGTAAAGCTCCTAA+AGG - chr2.4:17779242-17779261 MS.gene065170:CDS 35.0%
! TCGATTTTGAACACAGTAAC+AGG - chr2.4:17780204-17780223 MS.gene065170:CDS 35.0%
! TGTGTAGGTAAGGCAATTTT+TGG - chr2.4:17779059-17779078 MS.gene065170:CDS 35.0%
!! AGAGATAGGAAGTATCCAAA+TGG - chr2.4:17779110-17779129 MS.gene065170:CDS 35.0%
!! CTAAAGGCACCAAAACTAAT+TGG - chr2.4:17779258-17779277 MS.gene065170:CDS 35.0%
!! GAGATAGGAAGTATCCAAAT+GGG - chr2.4:17779111-17779130 MS.gene065170:CDS 35.0%
!!! CAATTAGTTTTGGTGCCTTT+AGG + chr2.4:17779260-17779279 None:intergenic 35.0%
!!! GCTAGTTTTCTCCGTAATAA+CGG + chr2.4:17780325-17780344 None:intergenic 35.0%
AACAAGAAGCTCTTCATCAG+TGG + chr2.4:17778837-17778856 None:intergenic 40.0%
AACTTACTTGGAAGAACCCA+TGG + chr2.4:17778938-17778957 None:intergenic 40.0%
AAGCAATGGTCGTCAATTTG+TGG + chr2.4:17780063-17780082 None:intergenic 40.0%
ACAAGAAGCTCTTCATCAGT+GGG + chr2.4:17778836-17778855 None:intergenic 40.0%
ACAGTAACAGGGTTTCAAGA+CGG - chr2.4:17780216-17780235 MS.gene065170:CDS 40.0%
ACTTACTTGGAAGAACCCAT+GGG + chr2.4:17778937-17778956 None:intergenic 40.0%
AGGAATGGGATACACTAATC+CGG - chr2.4:17780452-17780471 MS.gene065170:CDS 40.0%
ATCTCTACAAATTCGACCCA+TGG - chr2.4:17778918-17778937 MS.gene065170:CDS 40.0%
CAAATAGAGTAGCTGGATCT+GGG - chr2.4:17779141-17779160 MS.gene065170:CDS 40.0%
CAGCAAAAGGTCAAAAACAG+AGG + chr2.4:17779807-17779826 None:intergenic 40.0%
CTTGACTCTTCACGAAACAA+CGG - chr2.4:17779302-17779321 MS.gene065170:CDS 40.0%
GGTAAACTCAATTGTGCAAG+AGG + chr2.4:17778794-17778813 None:intergenic 40.0%
TCAGCTTCTCTTCTTCTTGT+TGG + chr2.4:17780128-17780147 None:intergenic 40.0%
TCTCTACAAATTCGACCCAT+GGG - chr2.4:17778919-17778938 MS.gene065170:CDS 40.0%
TGTCCCCACATTATGTCAAT+TGG - chr2.4:17780293-17780312 MS.gene065170:intron 40.0%
TGTTGGAATCCAAATCCAAC+TGG + chr2.4:17780510-17780529 None:intergenic 40.0%
TTTCAAGACGGTCAAACTCA+AGG - chr2.4:17780228-17780247 MS.gene065170:intron 40.0%
! AACCAAGTTGAGAATTCGTC+TGG - chr2.4:17780396-17780415 MS.gene065170:CDS 40.0%
! ACCAAGTTGAGAATTCGTCT+GGG - chr2.4:17780397-17780416 MS.gene065170:CDS 40.0%
ACAAGGCCAAATAGAGTAGC+TGG - chr2.4:17779134-17779153 MS.gene065170:CDS 45.0%
ACCCAGACGAATTCTCAACT+TGG + chr2.4:17780401-17780420 None:intergenic 45.0%
ACGTGTCAACTCGCTAAGAA+CGG - chr2.4:17780092-17780111 MS.gene065170:CDS 45.0%
ACTGAAGAGGAGGTTCAAAG+TGG - chr2.4:17780363-17780382 MS.gene065170:CDS 45.0%
CAAATCCAACTGGTTGAACC+GGG + chr2.4:17780500-17780519 None:intergenic 45.0%
CAAGAAGCTCTTCATCAGTG+GGG + chr2.4:17778835-17778854 None:intergenic 45.0%
CCAAATAGAGTAGCTGGATC+TGG - chr2.4:17779140-17779159 MS.gene065170:CDS 45.0%
CCAAATCCAACTGGTTGAAC+CGG + chr2.4:17780501-17780520 None:intergenic 45.0%
CCAGATCCAGCTACTCTATT+TGG + chr2.4:17779143-17779162 None:intergenic 45.0%
CTGAAGAGGAGGTTCAAAGT+GGG - chr2.4:17780364-17780383 MS.gene065170:CDS 45.0%
CTTTGAACCTCCTCTTCAGT+CGG + chr2.4:17780363-17780382 None:intergenic 45.0%
GACATAATGTGGGGACAGAA+GGG + chr2.4:17780290-17780309 None:intergenic 45.0%
GCACAATTGAGTTTACCTCC+TGG - chr2.4:17778797-17778816 MS.gene065170:CDS 45.0%
GGGTAAAATCGAAAACCAGG+AGG + chr2.4:17778815-17778834 None:intergenic 45.0%
GTGGGGTAAAATCGAAAACC+AGG + chr2.4:17778818-17778837 None:intergenic 45.0%
TGAAGAGGAGGTTCAAAGTG+GGG - chr2.4:17780365-17780384 MS.gene065170:CDS 45.0%
TGACATAATGTGGGGACAGA+AGG + chr2.4:17780291-17780310 None:intergenic 45.0%
! GAAACGACGCCATTTGGAAT+AGG + chr2.4:17779961-17779980 None:intergenic 45.0%
!! CTATTTGGCCTTGTCCCATT+TGG + chr2.4:17779128-17779147 None:intergenic 45.0%
!! GGAAGTATCCAAATGGGACA+AGG - chr2.4:17779117-17779136 MS.gene065170:CDS 45.0%
!!! TCGTCTGGGTTTTTTCAACG+CGG - chr2.4:17780411-17780430 MS.gene065170:CDS 45.0%
!!! AACAAATTTTTTTTAAAAAT+TGG - chr2.4:17779516-17779535 MS.gene065170:intron 5.0%
!!! ACAAATTTTTTTTAAAAATT+GGG - chr2.4:17779517-17779536 MS.gene065170:intron 5.0%
!!! TATTTATTATTTTTTTAAGA+AGG + chr2.4:17779626-17779645 None:intergenic 5.0%
ACCGGGTACCTAAACCCAAA+CGG + chr2.4:17780483-17780502 None:intergenic 50.0%
ACTAATCCGGTTGACCCGTT+TGG - chr2.4:17780465-17780484 MS.gene065170:CDS 50.0%
ATTCAAGAACGTCGTCGAGG+TGG + chr2.4:17780035-17780054 None:intergenic 50.0%
CCGGTTCAACCAGTTGGATT+TGG - chr2.4:17780498-17780517 MS.gene065170:CDS 50.0%
CTAAACCCAAACGGGTCAAC+CGG + chr2.4:17780474-17780493 None:intergenic 50.0%
CTAATCCGGTTGACCCGTTT+GGG - chr2.4:17780466-17780485 MS.gene065170:CDS 50.0%
CTGCTTGAAACGACGCCATT+TGG + chr2.4:17779967-17779986 None:intergenic 50.0%
GACTCTTCACGAAACAACGG+TGG - chr2.4:17779305-17779324 MS.gene065170:CDS 50.0%
GAGTAGCTGGATCTGGGTAT+TGG - chr2.4:17779147-17779166 MS.gene065170:CDS 50.0%
GTGATTCAAGAACGTCGTCG+AGG + chr2.4:17780038-17780057 None:intergenic 50.0%
TGGGGACAGAAGGGACATAA+AGG + chr2.4:17780281-17780300 None:intergenic 50.0%
TTCAAGAACGTCGTCGAGGT+GGG + chr2.4:17780034-17780053 None:intergenic 50.0%
! GTTCTTAGCGAGTTGACACG+TGG + chr2.4:17780093-17780112 None:intergenic 50.0%
!! TCTGGGTATTGGAAAGCCAC+TGG - chr2.4:17779158-17779177 MS.gene065170:CDS 50.0%
ACGAAACAACGGTGGCACCA+AGG - chr2.4:17779313-17779332 MS.gene065170:CDS 55.0%
AGGTACCCGGTTCAACCAGT+TGG - chr2.4:17780492-17780511 MS.gene065170:CDS 55.0%
CACGTGGCAGCTTGAAGCAA+TGG + chr2.4:17780077-17780096 None:intergenic 55.0%
CCGGGTACCTAAACCCAAAC+GGG + chr2.4:17780482-17780501 None:intergenic 55.0%
CTCCTCTTCAGTCGGATGCA+CGG + chr2.4:17780355-17780374 None:intergenic 55.0%
TCCTCTTCAGTCGGATGCAC+GGG + chr2.4:17780354-17780373 None:intergenic 55.0%
! CCCGTTTGGGTTTAGGTACC+CGG - chr2.4:17780479-17780498 MS.gene065170:CDS 55.0%
! CGGTTGACCCGTTTGGGTTT+AGG - chr2.4:17780472-17780491 MS.gene065170:CDS 55.0%
ACCCGTGCATCCGACTGAAG+AGG - chr2.4:17780350-17780369 MS.gene065170:intron 60.0%
CGTGCATCCGACTGAAGAGG+AGG - chr2.4:17780353-17780372 MS.gene065170:CDS 60.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 17778770 17780533 17778770 ID=MS.gene065170
chr2.4 mRNA 17778770 17780533 17778770 ID=MS.gene065170.t1;Parent=MS.gene065170
chr2.4 exon 17780353 17780533 17780353 ID=MS.gene065170.t1.exon1;Parent=MS.gene065170.t1
chr2.4 CDS 17780353 17780533 17780353 ID=cds.MS.gene065170.t1;Parent=MS.gene065170.t1
chr2.4 exon 17779969 17780237 17779969 ID=MS.gene065170.t1.exon2;Parent=MS.gene065170.t1
chr2.4 CDS 17779969 17780237 17779969 ID=cds.MS.gene065170.t1;Parent=MS.gene065170.t1
chr2.4 exon 17778770 17779399 17778770 ID=MS.gene065170.t1.exon3;Parent=MS.gene065170.t1
chr2.4 CDS 17778770 17779399 17778770 ID=cds.MS.gene065170.t1;Parent=MS.gene065170.t1
Gene Sequence

>MS.gene065170

ATGGGAATTCAAGACAAAGATCCTCTTGCACAATTGAGTTTACCTCCTGGTTTTCGATTTTACCCCACTGATGAAGAGCTTCTTGTTCAATATCTATGTCGTAAAGTAGCTGGTCATCATTTTTCTCTTCAAATCATTGCTGAAATTGATCTCTACAAATTCGACCCATGGGTTCTTCCAAGTAAGTTAATTTCACAACGAATTTGTTTTGTTAGAATCACTGTGAATCATCGTGATTTAAATAATTTAACCTATGTTTTATTCATATTAAAGTTGTGTGTGATTAATTTGTGTAGGTAAGGCAATTTTTGGTGAGAAAGAATGGTATTTCTTTAGTCCAAGAGATAGGAAGTATCCAAATGGGACAAGGCCAAATAGAGTAGCTGGATCTGGGTATTGGAAAGCCACTGGAACAGACAAGATTATAACAAATGAAGGTAGAAAAGTTGGTATAAAAAAAGCACTTGTTTTTTATGTTGGTAAAGCTCCTAAAGGCACCAAAACTAATTGGATTATGCATGAGTATCGACTACTTGACTCTTCACGAAACAACGGTGGCACCAAGGTATTATATGACATTCATTTTTTTGTTACTATTTAACTATTTCAAATGTCTAAATTTAGCATTACTAATTTTTACTTAGTATATACACAAATAATTTTAAATTGATCACAATTCTCAATATTACAAAGAATTTTATCTAGGCTGATGATTTGAAAATGGGCAATCAAATATTGAGAATCACAACAAATTTTTTTTAAAAATTGGGTGATACATGGTTTAAATGAATTGCACTCATACATACACGTCAATATTTGATATTTCAAAGGATTAATATTAAAAAAAAAATCTCCTTCTTAAAAAAATAATAAATATTTTTTTAATAATTCCTAAAAATTTTGTTGTTCAATCATGATCACAAATTTTATTTTTTGAAACCCTTTGCCAATTATCAAACTCTTTTTTAAACCTTGTCACCATATTATTTATTTCACAATTCACTTCCTCTTGTTCCATTTTAAAATATTCACTTCCTCTGTTTTTGACCTTTTGCTGTTTTACCAAATTGTTTTATGGGATAATTATTATTATTACAACGTTAATTTGTTGAAATTTTTGTTCTTGAATTGCAGCTAGATGATTGGGTTCTATGTCGTATCTACAAGAAAAATTCAAGTGCACAAAAACCTATTCCAAATGGCGTCGTTTCAAGCAGAGAATACACTCAATACAGCAACGGTTCATCGTCTTCTTCATCATCCCACCTCGACGACGTTCTTGAATCACTTCCACAAATTGACGACCATTGCTTCAAGCTGCCACGTGTCAACTCGCTAAGAACGGCGCAACATCACCAACAAGAAGAAGAGAAGCTGAATCTTCAAAATTTAAACGCTGCAAATAACAATTTCATGGATTGGTCTAATTCATCATCGATTTTGAACACAGTAACAGGGTTTCAAGACGGTCAAACTCAAGGAATGATGAATTTTAGTGGTTGCAATGACCTTTATGTCCCTTCTGTCCCCACATTATGTCAATTGGACTCTTCCGTTATTACGGAGAAAACTAGCAAGATACCCGTGCATCCGACTGAAGAGGAGGTTCAAAGTGGGGCGAGAGCAAACCAAGTTGAGAATTCGTCTGGGTTTTTTCAACGCGGTTCAAATGATTTTACTCAAGGAATGGGATACACTAATCCGGTTGACCCGTTTGGGTTTAGGTACCCGGTTCAACCAGTTGGATTTGGATTCCAACAATGA
Protein sequence

>MS.gene065170.t1

MGIQDKDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIAEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGTRPNRVAGSGYWKATGTDKIITNEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLLDSSRNNGGTKLDDWVLCRIYKKNSSAQKPIPNGVVSSREYTQYSNGSSSSSSSHLDDVLESLPQIDDHCFKLPRVNSLRTAQHHQQEEEKLNLQNLNAANNNFMDWSNSSSILNTVTGFQDGQTQGMMNFSGCNDLYVPSVPTLCQLDSSVITEKTSKIPVHPTEEEVQSGARANQVENSSGFFQRGSNDFTQGMGYTNPVDPFGFRYPVQPVGFGFQQ