AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene059867

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059867.t1 MTR_2g079990 93.575 358 17 2 1 358 3 354 0.0 685
MS.gene059867.t1 MTR_2g079990 86.788 386 17 3 1 358 3 382 0.0 670
MS.gene059867.t1 MTR_8g059170 65.043 349 97 8 1 347 1 326 2.08e-149 424
MS.gene059867.t1 MTR_3g088110 66.279 172 54 2 10 178 3 173 5.48e-78 241
MS.gene059867.t1 MTR_2g080010 64.162 173 49 2 11 170 12 184 2.54e-76 239
MS.gene059867.t1 MTR_8g094580 67.702 161 47 2 12 168 5 164 2.36e-75 234
MS.gene059867.t1 MTR_4g089135 63.388 183 42 3 14 171 15 197 1.27e-74 234
MS.gene059867.t1 MTR_2157s0010 50.584 257 105 7 10 254 4 250 2.07e-74 231
MS.gene059867.t1 MTR_3g096920 66.049 162 51 2 10 168 3 163 1.45e-73 230
MS.gene059867.t1 MTR_7g085220 63.314 169 49 3 11 166 5 173 6.43e-73 230
MS.gene059867.t1 MTR_7g100990 62.130 169 58 3 5 167 2 170 8.89e-71 224
MS.gene059867.t1 MTR_4g081870 63.057 157 54 1 10 162 5 161 4.04e-70 220
MS.gene059867.t1 MTR_5g041940 63.871 155 52 1 12 162 1 155 4.28e-70 220
MS.gene059867.t1 MTR_2g093810 59.756 164 60 2 10 167 10 173 3.06e-68 217
MS.gene059867.t1 MTR_3g096920 53.769 199 51 2 10 168 3 200 2.81e-67 215
MS.gene059867.t1 MTR_2g064090 55.063 158 68 2 9 163 1 158 3.10e-60 197
MS.gene059867.t1 MTR_5g076850 56.329 158 67 1 9 164 1 158 5.80e-60 204
MS.gene059867.t1 MTR_6g084430 55.414 157 68 1 13 169 4 158 5.02e-59 194
MS.gene059867.t1 MTR_3g435150 55.090 167 73 1 11 175 13 179 3.22e-58 191
MS.gene059867.t1 MTR_6g012670 52.000 175 82 1 4 176 10 184 4.83e-58 191
MS.gene059867.t1 MTR_3g064580 50.262 191 90 3 9 196 1 189 9.75e-58 199
MS.gene059867.t1 MTR_4g108760 53.293 167 76 1 11 175 14 180 1.52e-57 191
MS.gene059867.t1 MTR_7g085260 48.792 207 86 4 12 210 15 209 8.42e-57 189
MS.gene059867.t1 MTR_6g477900 51.592 157 74 1 9 163 1 157 1.88e-56 184
MS.gene059867.t1 MTR_5g040420 52.083 192 80 6 5 185 6 196 2.33e-56 189
MS.gene059867.t1 MTR_3g109340 54.430 158 68 2 13 168 21 176 1.41e-55 186
MS.gene059867.t1 MTR_3g109340 55.000 160 65 3 13 168 21 177 2.15e-55 185
MS.gene059867.t1 MTR_4g134460 56.051 157 62 3 16 169 56 208 3.31e-55 187
MS.gene059867.t1 MTR_3g070030 45.918 196 100 2 11 203 16 208 1.32e-54 183
MS.gene059867.t1 MTR_4g035590 55.263 152 62 2 14 162 8 156 2.31e-54 182
MS.gene059867.t1 MTR_1g008740 54.037 161 66 4 13 168 12 169 3.45e-54 182
MS.gene059867.t1 MTR_1g008740 54.037 161 66 4 13 168 26 183 4.20e-54 182
MS.gene059867.t1 MTR_6g011860 52.469 162 67 2 14 165 15 176 6.50e-54 182
MS.gene059867.t1 MTR_5g021710 44.670 197 101 3 14 204 8 202 6.86e-54 181
MS.gene059867.t1 MTR_8g467490 48.168 191 87 5 16 194 16 206 1.47e-53 181
MS.gene059867.t1 MTR_2g062730 50.595 168 74 4 10 170 6 171 5.62e-53 179
MS.gene059867.t1 MTR_2g078700 55.000 160 60 3 14 165 23 178 6.92e-53 179
MS.gene059867.t1 MTR_1g096430 46.821 173 87 2 14 183 7 177 2.68e-52 177
MS.gene059867.t1 MTR_5g014300 51.786 168 67 4 9 166 1 164 2.93e-52 176
MS.gene059867.t1 MTR_8g076110 48.765 162 78 2 9 167 1 160 4.10e-52 175
MS.gene059867.t1 MTR_6g032770 46.759 216 87 6 12 211 16 219 1.42e-51 176
MS.gene059867.t1 MTR_5g090970 47.150 193 89 3 16 196 20 211 1.80e-51 174
MS.gene059867.t1 MTR_4g036030 50.658 152 70 2 14 162 7 156 2.36e-51 174
MS.gene059867.t1 MTR_8g024480 47.879 165 74 2 10 162 11 175 4.07e-51 176
MS.gene059867.t1 MTR_4g098630 44.949 198 103 3 13 205 5 201 6.77e-51 172
MS.gene059867.t1 MTR_7g005280 54.658 161 66 3 10 168 11 166 8.53e-51 170
MS.gene059867.t1 MTR_5g090970 47.150 193 88 4 16 196 20 210 1.57e-50 171
MS.gene059867.t1 MTR_2g064470 44.898 196 91 5 9 199 6 189 2.95e-50 170
MS.gene059867.t1 MTR_4g101680 51.316 152 69 2 14 162 7 156 3.43e-50 172
MS.gene059867.t1 MTR_7g011130 38.224 259 136 4 11 253 16 266 4.17e-50 171
MS.gene059867.t1 MTR_2g068920 46.798 203 83 6 16 200 23 218 4.93e-50 169
MS.gene059867.t1 MTR_2g068880 49.133 173 72 4 16 172 24 196 1.44e-48 166
MS.gene059867.t1 MTR_5g012080 50.000 154 70 4 14 162 7 158 1.71e-48 167
MS.gene059867.t1 MTR_8g094580 69.091 110 29 2 63 168 2 110 2.04e-48 163
MS.gene059867.t1 MTR_7g011120 46.108 167 81 1 11 168 5 171 2.84e-48 165
MS.gene059867.t1 MTR_3g093040 48.148 162 78 3 9 166 103 262 7.58e-47 162
MS.gene059867.t1 MTR_1g069805 43.602 211 92 7 1 194 1 201 7.63e-47 160
MS.gene059867.t1 MTR_3g096140 46.309 149 78 1 16 162 9 157 1.27e-46 160
MS.gene059867.t1 MTR_5g069030 50.000 164 77 2 4 162 12 175 2.16e-46 167
MS.gene059867.t1 MTR_3g096140 46.309 149 78 1 16 162 9 157 6.72e-46 160
MS.gene059867.t1 MTR_8g063550 42.614 176 96 2 9 182 1 173 7.16e-46 160
MS.gene059867.t1 MTR_2g086880 48.408 157 72 3 9 164 13 161 1.04e-45 163
MS.gene059867.t1 MTR_2g086880 48.408 157 72 3 9 164 13 161 1.42e-45 164
MS.gene059867.t1 MTR_7g097090 48.148 162 74 3 1 160 1 154 1.98e-45 157
MS.gene059867.t1 MTR_8g063550 42.614 176 96 2 9 182 1 173 2.70e-45 161
MS.gene059867.t1 MTR_3g093050 48.750 160 80 1 9 166 17 176 2.83e-45 164
MS.gene059867.t1 MTR_8g063550 42.614 176 96 2 9 182 1 173 4.00e-45 160
MS.gene059867.t1 MTR_3g093050 48.750 160 80 1 9 166 17 176 5.23e-45 163
MS.gene059867.t1 MTR_1g090723 48.718 156 77 2 16 168 10 165 7.80e-45 163
MS.gene059867.t1 MTR_3g116070 52.857 140 63 2 3 139 12 151 1.25e-44 157
MS.gene059867.t1 MTR_1g097300 45.283 159 85 1 12 168 17 175 1.48e-44 161
MS.gene059867.t1 MTR_1g090720 48.521 169 76 3 13 173 41 206 2.30e-44 159
MS.gene059867.t1 MTR_0036s0150 38.889 234 121 6 16 246 7 221 3.50e-44 160
MS.gene059867.t1 MTR_4g075980 49.375 160 72 4 11 167 13 166 3.94e-44 154
MS.gene059867.t1 MTR_1g090723 48.718 156 76 3 16 168 10 164 1.45e-43 159
MS.gene059867.t1 MTR_1g090723 48.718 156 76 3 16 168 10 164 1.75e-43 159
MS.gene059867.t1 MTR_8g093580 41.477 176 98 2 9 182 1 173 1.98e-43 157
MS.gene059867.t1 MTR_3g098810 47.531 162 73 3 14 165 14 173 3.30e-41 145
MS.gene059867.t1 MTR_8g099750 45.000 160 79 3 14 166 14 171 7.85e-41 143
MS.gene059867.t1 MTR_3g070040 42.105 190 100 5 18 203 12 195 2.45e-40 145
MS.gene059867.t1 MTR_3g096140 44.030 134 73 1 31 162 3 136 1.45e-37 138
MS.gene059867.t1 MTR_3g098810 51.515 132 58 2 14 141 14 143 1.47e-36 130
MS.gene059867.t1 MTR_4g094302 40.123 162 81 3 14 167 11 164 1.01e-35 129
MS.gene059867.t1 MTR_2g086690 45.570 158 72 5 15 160 5 160 1.82e-35 130
MS.gene059867.t1 MTR_8g023840 46.104 154 66 6 14 159 11 155 8.54e-35 132
MS.gene059867.t1 MTR_7g105170 36.598 194 103 8 14 189 4 195 1.31e-34 128
MS.gene059867.t1 MTR_4g052620 43.038 158 77 6 14 160 5 160 1.95e-33 125
MS.gene059867.t1 MTR_4g094302 44.531 128 61 2 14 139 11 130 8.84e-33 120
MS.gene059867.t1 MTR_8g023900 36.123 227 113 11 1 206 173 388 3.11e-31 123
MS.gene059867.t1 MTR_8g023900 40.252 159 86 5 9 162 7 161 3.26e-29 117
MS.gene059867.t1 MTR_8g023930 35.545 211 110 10 14 215 24 217 1.14e-29 119
MS.gene059867.t1 MTR_8g023860 40.909 154 74 6 14 159 12 156 1.71e-29 117
MS.gene059867.t1 MTR_8g093790 35.294 204 107 7 10 213 6 184 1.92e-25 101
MS.gene059867.t1 MTR_8g023880 39.053 169 74 7 13 162 6 164 5.01e-25 102
MS.gene059867.t1 MTR_7g070140 56.790 81 33 1 67 145 17 97 9.26e-23 92.8
MS.gene059867.t1 MTR_3g096400 30.952 210 117 6 12 207 5 200 2.59e-21 90.9
MS.gene059867.t1 MTR_7g083360 31.206 141 88 5 10 144 6 143 3.27e-18 81.3
MS.gene059867.t1 MTR_7g083330 32.558 129 81 4 12 137 16 141 5.63e-14 70.1
MS.gene059867.t1 MTR_7g070150 53.448 58 24 1 111 168 9 63 3.98e-13 65.1
MS.gene059867.t1 MTR_8g102240 32.895 152 76 5 12 139 45 194 4.77e-12 67.4
MS.gene059867.t1 MTR_8g102240 32.895 152 76 5 12 139 45 194 4.78e-12 67.4
MS.gene059867.t1 MTR_7g116460 35.714 154 83 9 20 163 11 158 6.38e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059867.t1 AT4G27410 78.636 220 46 1 1 220 1 219 8.72e-124 358
MS.gene059867.t1 AT1G52890 57.061 347 116 9 1 345 1 316 7.48e-122 354
MS.gene059867.t1 AT4G27410 72.996 237 46 2 1 220 1 236 2.49e-119 347
MS.gene059867.t1 AT3G15500 68.924 251 71 4 1 247 1 248 8.57e-118 344
MS.gene059867.t1 AT3G04070 62.694 193 57 5 6 185 4 194 2.31e-76 239
MS.gene059867.t1 AT1G01720 65.341 176 55 3 12 182 5 179 4.69e-76 236
MS.gene059867.t1 AT5G63790 59.162 191 69 3 10 195 46 232 2.34e-74 233
MS.gene059867.t1 AT5G63790 59.162 191 69 3 10 195 56 242 4.47e-74 232
MS.gene059867.t1 AT5G08790 64.072 167 54 2 10 171 3 168 4.95e-74 231
MS.gene059867.t1 AT1G61110 66.477 176 43 4 14 175 16 189 4.03e-73 230
MS.gene059867.t1 AT1G77450 65.432 162 52 2 10 168 6 166 7.63e-73 227
MS.gene059867.t1 AT3G04070 57.895 209 57 6 6 185 4 210 2.23e-72 229
MS.gene059867.t1 AT1G69490 62.963 162 56 1 10 167 5 166 5.57e-71 223
MS.gene059867.t1 AT3G15510 64.417 163 45 3 18 167 21 183 9.15e-70 223
MS.gene059867.t1 AT3G18400 43.388 242 128 3 14 248 5 244 1.13e-62 203
MS.gene059867.t1 AT1G52880 63.125 160 47 2 18 165 21 180 3.42e-61 199
MS.gene059867.t1 AT1G65910 48.990 198 96 3 9 202 1 197 6.78e-59 201
MS.gene059867.t1 AT5G07680 52.105 190 86 3 1 188 4 190 9.20e-59 193
MS.gene059867.t1 AT3G17730 46.114 193 92 3 9 198 1 184 2.84e-58 189
MS.gene059867.t1 AT5G61430 45.726 234 108 5 11 225 13 246 3.35e-58 192
MS.gene059867.t1 AT2G02450 52.874 174 79 2 16 188 53 224 1.19e-57 192
MS.gene059867.t1 AT2G02450 52.874 174 79 2 16 188 53 224 1.60e-57 192
MS.gene059867.t1 AT5G07680 56.604 159 67 1 12 168 1 159 2.45e-57 189
MS.gene059867.t1 AT2G24430 55.625 160 68 2 13 170 15 173 3.33e-57 189
MS.gene059867.t1 AT2G24430 55.625 160 68 2 13 170 15 173 3.33e-57 189
MS.gene059867.t1 AT3G03200 48.691 191 91 3 9 196 1 187 7.82e-57 192
MS.gene059867.t1 AT5G18270 49.505 202 95 4 12 210 19 216 1.93e-56 187
MS.gene059867.t1 AT5G17260 53.049 164 74 2 9 169 1 164 3.20e-56 191
MS.gene059867.t1 AT5G39610 49.749 199 84 4 11 195 17 213 8.79e-56 184
MS.gene059867.t1 AT1G26870 50.811 185 79 4 5 177 7 191 1.21e-55 187
MS.gene059867.t1 AT5G18270 48.515 202 97 4 12 210 19 216 1.51e-55 185
MS.gene059867.t1 AT2G43000 54.194 155 70 1 16 169 20 174 1.15e-54 181
MS.gene059867.t1 AT5G39820 49.730 185 68 4 16 175 22 206 1.30e-54 182
MS.gene059867.t1 AT3G04060 49.505 202 90 5 12 210 18 210 2.51e-54 182
MS.gene059867.t1 AT2G33480 57.143 154 63 1 12 165 13 163 6.21e-54 179
MS.gene059867.t1 AT4G10350 51.974 152 70 1 14 162 9 160 1.00e-53 180
MS.gene059867.t1 AT5G53950 56.051 157 65 2 14 166 17 173 4.37e-53 180
MS.gene059867.t1 AT2G18060 48.171 164 80 2 7 167 2 163 5.69e-53 179
MS.gene059867.t1 AT2G18060 48.171 164 80 2 7 167 2 163 5.69e-53 179
MS.gene059867.t1 AT2G33480 57.143 154 61 2 12 165 13 161 7.10e-53 176
MS.gene059867.t1 AT1G71930 42.640 197 103 3 7 195 2 196 7.21e-53 177
MS.gene059867.t1 AT1G71930 42.640 197 103 3 7 195 2 196 7.21e-53 177
MS.gene059867.t1 AT1G33280 52.632 152 66 2 14 162 8 156 1.53e-52 176
MS.gene059867.t1 AT1G79580 54.140 157 65 3 10 162 13 166 1.94e-52 178
MS.gene059867.t1 AT1G79580 54.140 157 65 3 10 162 13 166 1.94e-52 178
MS.gene059867.t1 AT1G79580 54.140 157 65 3 10 162 13 166 1.94e-52 178
MS.gene059867.t1 AT1G79580 54.140 157 65 3 10 162 13 166 1.94e-52 178
MS.gene059867.t1 AT1G79580 54.140 157 65 3 10 162 13 166 1.94e-52 178
MS.gene059867.t1 AT1G54330 52.866 157 69 2 9 163 1 154 3.61e-52 175
MS.gene059867.t1 AT5G46590 55.195 154 65 3 14 163 6 159 3.73e-52 175
MS.gene059867.t1 AT3G29035 53.750 160 72 1 11 168 21 180 6.27e-52 175
MS.gene059867.t1 AT5G13180 56.604 159 63 4 12 168 12 166 8.62e-52 172
MS.gene059867.t1 AT3G15170 53.896 154 67 2 14 163 20 173 2.64e-51 173
MS.gene059867.t1 AT4G17980 53.750 160 60 4 14 163 6 161 4.32e-51 171
MS.gene059867.t1 AT4G17980 52.121 165 65 4 9 163 1 161 7.00e-51 171
MS.gene059867.t1 AT1G32510 43.182 220 100 5 14 208 6 225 9.94e-51 171
MS.gene059867.t1 AT4G36160 51.634 153 69 2 13 162 9 159 1.16e-50 173
MS.gene059867.t1 AT4G36160 51.634 153 69 2 13 162 9 159 1.16e-50 173
MS.gene059867.t1 AT4G36160 51.634 153 69 2 13 162 13 163 1.32e-50 173
MS.gene059867.t1 AT1G56010 46.875 160 81 2 9 164 14 173 1.76e-50 171
MS.gene059867.t1 AT5G66300 50.000 156 74 2 13 165 11 165 1.91e-50 171
MS.gene059867.t1 AT3G12977 46.541 159 84 1 9 166 13 171 2.20e-50 170
MS.gene059867.t1 AT1G12260 50.641 156 72 2 14 166 7 160 2.33e-50 172
MS.gene059867.t1 AT3G10480 50.633 158 76 1 9 164 22 179 3.30e-50 174
MS.gene059867.t1 AT1G12260 50.641 156 72 2 14 166 7 160 3.59e-50 172
MS.gene059867.t1 AT1G76420 48.837 172 77 3 1 162 1 171 4.59e-50 171
MS.gene059867.t1 AT5G62380 51.974 152 68 2 14 162 7 156 7.64e-50 171
MS.gene059867.t1 AT5G62380 51.974 152 68 2 14 162 7 156 7.64e-50 171
MS.gene059867.t1 AT1G33060 48.466 163 82 1 9 169 19 181 1.63e-49 176
MS.gene059867.t1 AT1G33060 48.466 163 82 1 9 169 19 181 1.65e-49 176
MS.gene059867.t1 AT1G32770 45.604 182 85 3 10 177 12 193 2.11e-49 169
MS.gene059867.t1 AT1G62700 50.641 156 72 2 14 166 7 160 2.46e-49 170
MS.gene059867.t1 AT1G62700 50.641 156 72 2 14 166 7 160 2.46e-49 170
MS.gene059867.t1 AT5G46590 56.028 141 59 2 14 151 6 146 2.62e-49 167
MS.gene059867.t1 AT2G46770 41.038 212 106 3 10 202 12 223 7.81e-49 168
MS.gene059867.t1 AT3G10480 50.314 159 76 2 9 164 22 180 8.83e-49 170
MS.gene059867.t1 AT3G10500 50.000 158 77 1 13 168 8 165 1.67e-48 172
MS.gene059867.t1 AT4G35580 45.408 196 99 3 13 206 8 197 1.75e-48 171
MS.gene059867.t1 AT4G35580 45.408 196 99 3 13 206 8 197 1.80e-48 171
MS.gene059867.t1 AT4G35580 45.408 196 99 3 13 206 8 197 2.01e-48 171
MS.gene059867.t1 AT5G24590 42.929 198 105 3 4 198 3 195 5.24e-48 168
MS.gene059867.t1 AT5G04410 50.000 158 77 1 13 168 8 165 5.82e-48 171
MS.gene059867.t1 AT3G10490 50.323 155 74 2 13 164 26 180 6.99e-48 162
MS.gene059867.t1 AT3G10490 50.000 158 70 3 13 164 26 180 4.05e-47 166
MS.gene059867.t1 AT3G61910 43.478 184 88 3 10 177 7 190 1.33e-46 162
MS.gene059867.t1 AT2G17040 40.909 220 116 5 16 229 8 219 4.49e-46 159
MS.gene059867.t1 AT3G12910 41.176 238 106 8 4 212 15 247 4.05e-45 157
MS.gene059867.t1 AT3G49530 47.134 157 80 2 9 162 8 164 5.51e-45 159
MS.gene059867.t1 AT1G34180 45.161 155 83 1 16 168 18 172 8.74e-45 159
MS.gene059867.t1 AT3G49530 47.134 157 80 2 9 162 8 164 1.47e-44 159
MS.gene059867.t1 AT2G27300 38.009 221 110 5 9 210 9 221 4.28e-44 155
MS.gene059867.t1 AT5G64060 44.586 157 85 1 9 163 1 157 4.81e-44 155
MS.gene059867.t1 AT1G34180 45.161 155 83 1 16 168 18 172 4.88e-44 160
MS.gene059867.t1 AT3G10480 43.085 188 71 3 13 164 26 213 5.90e-44 159
MS.gene059867.t1 AT1G34190 43.871 155 85 1 16 168 18 172 6.30e-44 159
MS.gene059867.t1 AT5G22290 41.304 184 92 5 16 192 23 197 8.31e-44 154
MS.gene059867.t1 AT1G34180 42.515 167 82 1 16 168 18 184 2.45e-42 153
MS.gene059867.t1 AT4G28530 45.556 180 72 6 1 162 1 172 3.67e-42 150
MS.gene059867.t1 AT3G44290 43.396 159 78 3 16 169 16 167 4.21e-42 147
MS.gene059867.t1 AT1G34180 42.515 167 82 1 16 168 18 184 1.09e-41 154
MS.gene059867.t1 AT3G44290 43.396 159 78 3 16 169 16 167 2.68e-41 147
MS.gene059867.t1 AT5G09330 42.675 157 88 1 9 163 1 157 5.66e-41 150
MS.gene059867.t1 AT5G09330 42.675 157 88 1 9 163 1 157 5.66e-41 150
MS.gene059867.t1 AT5G09330 42.675 157 88 1 9 163 1 157 5.66e-41 150
MS.gene059867.t1 AT5G09330 42.675 157 88 1 9 163 1 157 5.66e-41 150
MS.gene059867.t1 AT5G09330 42.675 157 88 1 9 163 1 157 5.66e-41 150
MS.gene059867.t1 AT1G32870 50.314 159 73 3 14 168 10 166 7.38e-41 150
MS.gene059867.t1 AT1G32870 50.314 159 73 3 14 168 10 166 8.67e-41 150
MS.gene059867.t1 AT1G32870 50.314 159 73 3 14 168 46 202 1.47e-40 150
MS.gene059867.t1 AT5G61430 42.857 182 85 5 63 225 2 183 1.81e-35 130
MS.gene059867.t1 AT4G10350 55.208 96 43 0 67 162 18 113 1.19e-33 126
MS.gene059867.t1 AT1G56010 51.429 105 48 1 63 164 2 106 1.95e-33 125
MS.gene059867.t1 AT5G64530 39.306 173 77 4 12 168 1 161 3.44e-33 122
MS.gene059867.t1 AT2G33480 57.576 99 42 0 67 165 8 106 5.79e-33 122
MS.gene059867.t1 AT3G44350 40.491 163 86 5 14 167 5 165 9.38e-33 122
MS.gene059867.t1 AT3G12977 51.429 105 50 1 63 166 14 118 1.74e-32 121
MS.gene059867.t1 AT5G22380 37.245 196 111 8 17 201 8 202 5.97e-31 117
MS.gene059867.t1 AT5G04395 42.857 147 66 3 10 139 24 169 1.43e-30 115
MS.gene059867.t1 AT5G64530 44.697 132 59 3 12 141 1 120 3.51e-30 113
MS.gene059867.t1 AT3G44350 42.029 138 70 4 14 143 5 140 1.60e-29 111
MS.gene059867.t1 AT4G01550 37.714 175 90 7 17 182 7 171 1.38e-26 110
MS.gene059867.t1 AT3G04420 41.732 127 70 2 15 137 4 130 2.93e-26 106
MS.gene059867.t1 AT2G43000 50.526 95 46 1 76 169 2 96 3.84e-26 103
MS.gene059867.t1 AT4G28530 35.758 165 51 3 14 162 10 135 4.90e-26 106
MS.gene059867.t1 AT3G04420 41.732 127 70 2 15 137 4 130 6.33e-26 106
MS.gene059867.t1 AT4G01520 35.632 174 97 6 15 178 5 173 9.25e-25 102
MS.gene059867.t1 AT4G27410 62.069 87 32 1 134 220 1 86 2.12e-24 98.2
MS.gene059867.t1 AT4G01540 36.047 172 95 6 17 178 7 173 2.27e-24 103
MS.gene059867.t1 AT4G01540 36.047 172 95 6 17 178 7 173 2.83e-24 102
MS.gene059867.t1 AT4G01540 36.257 171 94 6 17 177 7 172 3.99e-24 102
MS.gene059867.t1 AT4G01540 36.257 171 94 6 17 177 7 172 4.16e-24 103
MS.gene059867.t1 AT1G02230 41.538 130 66 5 15 137 4 130 3.17e-23 99.4
MS.gene059867.t1 AT1G02250 35.503 169 95 5 12 173 1 162 2.82e-22 97.1
MS.gene059867.t1 AT1G02220 37.692 130 74 3 12 137 1 127 4.50e-21 94.0
MS.gene059867.t1 AT3G56530 36.601 153 92 4 11 160 49 199 1.43e-20 91.3
MS.gene059867.t1 AT3G10490 49.367 79 39 1 87 164 2 80 2.47e-20 91.3
MS.gene059867.t1 AT3G10490 49.367 79 39 1 87 164 2 80 2.47e-20 91.3
MS.gene059867.t1 AT2G18060 47.368 76 38 1 92 167 2 75 9.17e-19 85.5
MS.gene059867.t1 AT5G50820 37.226 137 70 5 12 142 15 141 4.78e-18 81.6
MS.gene059867.t1 AT3G55210 34.161 161 88 5 14 160 11 167 6.33e-18 83.2
MS.gene059867.t1 AT1G01010 34.146 164 85 8 17 166 6 160 2.83e-17 83.2
MS.gene059867.t1 AT5G22290 39.623 106 49 4 93 192 2 98 3.18e-17 80.5
MS.gene059867.t1 AT5G14000 31.646 158 97 4 12 165 13 163 2.60e-16 77.0
MS.gene059867.t1 AT5G14000 34.615 130 81 2 12 139 13 140 8.66e-16 74.3
MS.gene059867.t1 AT3G04430 35.606 132 71 5 20 138 6 136 4.52e-12 65.1
MS.gene059867.t1 AT4G28500 34.641 153 80 6 14 148 59 209 3.09e-11 63.9
MS.gene059867.t1 AT4G29230 31.210 157 81 5 8 139 42 196 4.85e-11 64.3

Find 83 sgRNAs with CRISPR-Local

Find 123 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAAAGGCACCAAAACTAAT+TGG 0.246600 2.2:-15393161 MS.gene059867:CDS
CGGTTGACCCGTTTGGGTTT+AGG 0.268222 2.2:-15391950 MS.gene059867:CDS
CTATTTGGCCTTGTCCCATT+TGG 0.279664 2.2:+15393294 None:intergenic
CCAGATCCAGCTACTCTATT+TGG 0.287866 2.2:+15393279 None:intergenic
CCGGTTCAACCAGTTGGATT+TGG 0.292468 2.2:-15391924 MS.gene059867:CDS
CTGCTTGAAACGACGCCATT+TGG 0.294519 2.2:+15392455 None:intergenic
ATGCATAATCCAATTAGTTT+TGG 0.307345 2.2:+15393152 None:intergenic
TTCTAACTTTCTATCATTGT+TGG 0.309707 2.2:+15391898 None:intergenic
GATTCATCTTCTCTTCTTGT+TGG 0.315390 2.2:+15392294 None:intergenic
CTAATCCGGTTGACCCGTTT+GGG 0.322735 2.2:-15391956 MS.gene059867:CDS
TGCTGCAAATAATAATTTCA+TGG 0.328047 2.2:-15392258 MS.gene059867:CDS
TTTGGATACTTCCTATCTCT+TGG 0.340923 2.2:+15393312 None:intergenic
TGACATAATGTGGGGATAGA+AGG 0.344388 2.2:+15392134 None:intergenic
ACTAATCCGGTTGACCCGTT+TGG 0.373818 2.2:-15391957 MS.gene059867:CDS
GAAACGACGCCATTTGGAAT+AGG 0.376235 2.2:+15392461 None:intergenic
TATCCCCACATTATGTCAAT+TGG 0.377448 2.2:-15392129 MS.gene059867:CDS
CCAAATCCAACTGGTTGAAC+CGG 0.379491 2.2:+15391924 None:intergenic
AACCAAGTTGAGAATTCGTC+TGG 0.381998 2.2:-15392026 MS.gene059867:CDS
CCAAATAGAGTAGCTGGATC+TGG 0.388149 2.2:-15393279 MS.gene059867:CDS
TTGAATTGCAGCTAGATGAT+TGG 0.399386 2.2:-15392526 MS.gene059867:intron
CCCGTTTGGGTTTAGGTACC+CGG 0.405638 2.2:-15391943 MS.gene059867:CDS
TGAATTGCAGCTAGATGATT+GGG 0.406156 2.2:-15392525 MS.gene059867:intron
ACAAATGAAGGTAGAAAAGT+TGG 0.415542 2.2:-15393222 MS.gene059867:CDS
CTAAACCCAAACGGGTCAAC+CGG 0.415585 2.2:+15391951 None:intergenic
ATTTCTTTAGTCCAAGAGAT+AGG 0.426397 2.2:-15393323 MS.gene059867:CDS
CAAATAATAATTTCATGGAT+TGG 0.446522 2.2:-15392253 MS.gene059867:CDS
GAGTAGCTGGATCTGGGTAT+TGG 0.458403 2.2:-15393272 MS.gene059867:CDS
TCCTCTTCAGTCGGATGCAC+GGG 0.469154 2.2:+15392071 None:intergenic
AGAGATAGGAAGTATCCAAA+TGG 0.473419 2.2:-15393309 MS.gene059867:CDS
TGTTGGAATCCAAATCCAAC+TGG 0.474499 2.2:+15391915 None:intergenic
AAACAATGGTCGTCAATTTG+TGG 0.476369 2.2:+15392359 None:intergenic
ACAAGGCCAAATAGAGTAGC+TGG 0.476630 2.2:-15393285 MS.gene059867:CDS
TATGTTGGTAAAGCTCCTAA+AGG 0.483857 2.2:-15393177 MS.gene059867:CDS
CCGGGTACCTAAACCCAAAC+GGG 0.483949 2.2:+15391943 None:intergenic
ATCTTTACAAATTCGACCCA+TGG 0.486071 2.2:-15393501 MS.gene059867:CDS
TGGGGATAGAAGGGACATAA+AGG 0.490400 2.2:+15392144 None:intergenic
ACCGGGTACCTAAACCCAAA+CGG 0.492810 2.2:+15391942 None:intergenic
AACAAGAAGCTCTTCATCAG+TGG 0.495470 2.2:+15393585 None:intergenic
GACAAGATTATAACAAATGA+AGG 0.510810 2.2:-15393234 MS.gene059867:CDS
TATAATCTTGTCTGTTCCAG+TGG 0.510918 2.2:+15393245 None:intergenic
CAAATAGAGTAGCTGGATCT+GGG 0.514453 2.2:-15393278 MS.gene059867:CDS
TATCTATGTCGTAAAGTAGC+TGG 0.519439 2.2:-15393559 MS.gene059867:CDS
AGAGTCCAATTGACATAATG+TGG 0.520252 2.2:+15392124 None:intergenic
TTCAAGAACGTCGTCGAGGT+GGG 0.522480 2.2:+15392388 None:intergenic
AACTTACTTGGAAGAACCCA+TGG 0.526899 2.2:+15393484 None:intergenic
CTCCTCTTCAGTCGGATGCA+CGG 0.528695 2.2:+15392070 None:intergenic
GAGATAGGAAGTATCCAAAT+GGG 0.536430 2.2:-15393308 MS.gene059867:CDS
ACCCAGACGAATTCTCAACT+TGG 0.539808 2.2:+15392024 None:intergenic
GACATAATGTGGGGATAGAA+GGG 0.542071 2.2:+15392135 None:intergenic
AGGAATGGGATACACTAATC+CGG 0.545779 2.2:-15391970 MS.gene059867:CDS
ATTCAAGAACGTCGTCGAGG+TGG 0.545842 2.2:+15392387 None:intergenic
CTTTGAACCTCCTCTTCAGT+CGG 0.546459 2.2:+15392062 None:intergenic
TCTGGGTATTGGAAAGCCAC+TGG 0.550772 2.2:-15393261 MS.gene059867:CDS
ATTGGACTCTTCCGTTATCA+CGG 0.556755 2.2:-15392111 MS.gene059867:CDS
GCACAATTGAGTTTACCTCC+TGG 0.560444 2.2:-15393622 MS.gene059867:CDS
CAAATCCAACTGGTTGAACC+GGG 0.562369 2.2:+15391925 None:intergenic
TCTTTACAAATTCGACCCAT+GGG 0.566333 2.2:-15393500 MS.gene059867:CDS
ACAAGAAGCTCTTCATCAGT+GGG 0.569952 2.2:+15393586 None:intergenic
TTTCAAGACGGTCAAACTCA+AGG 0.582786 2.2:-15392194 MS.gene059867:CDS
GAGTCCAATTGACATAATGT+GGG 0.587884 2.2:+15392125 None:intergenic
GGTAAACTCAATTGTGCAAG+AGG 0.592070 2.2:+15393628 None:intergenic
CACGTGGCAGCTTGAAACAA+TGG 0.601524 2.2:+15392345 None:intergenic
AGGTACCCGGTTCAACCAGT+TGG 0.603748 2.2:-15391930 MS.gene059867:CDS
CTGAAGAGGAGGTTCAAAGT+GGG 0.606883 2.2:-15392058 MS.gene059867:CDS
ACCAAGTTGAGAATTCGTCT+GGG 0.609603 2.2:-15392025 MS.gene059867:CDS
ACGTGTCAACTCGCTAAGAA+CGG 0.615896 2.2:-15392327 MS.gene059867:CDS
GTGGGGTAAAATCGAAAACC+AGG 0.620046 2.2:+15393604 None:intergenic
ACCCGTGCATCCGACTGAAG+AGG 0.627654 2.2:-15392072 MS.gene059867:CDS
CGTGCATCCGACTGAAGAGG+AGG 0.634276 2.2:-15392069 MS.gene059867:CDS
GGAAGTATCCAAATGGGACA+AGG 0.639297 2.2:-15393302 MS.gene059867:CDS
ACTGAAGAGGAGGTTCAAAG+TGG 0.641217 2.2:-15392059 MS.gene059867:CDS
GTGATTCAAGAACGTCGTCG+AGG 0.650602 2.2:+15392384 None:intergenic
GACTCTTCACGAAACAACGG+TGG 0.660789 2.2:-15393114 MS.gene059867:CDS
GTTCTTAGCGAGTTGACACG+TGG 0.662417 2.2:+15392329 None:intergenic
CTTGACTCTTCACGAAACAA+CGG 0.662587 2.2:-15393117 MS.gene059867:CDS
TGAAGAGGAGGTTCAAAGTG+GGG 0.669043 2.2:-15392057 MS.gene059867:CDS
GAATACACTCAATACAGCAA+CGG 0.669213 2.2:-15392431 MS.gene059867:CDS
AGTCCAATTGACATAATGTG+GGG 0.679953 2.2:+15392126 None:intergenic
ACAGTAACAGGGTTTCAAGA+CGG 0.683973 2.2:-15392206 MS.gene059867:CDS
ACGAAACAACGGTGGCACCA+AGG 0.687136 2.2:-15393106 MS.gene059867:intron
ACTTACTTGGAAGAACCCAT+GGG 0.692202 2.2:+15393485 None:intergenic
GGGTAAAATCGAAAACCAGG+AGG 0.741080 2.2:+15393607 None:intergenic
CAAGAAGCTCTTCATCAGTG+GGG 0.743838 2.2:+15393587 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTTAATATGAATAAAACAT+AGG + chr2.2:15392164-15392183 None:intergenic 15.0%
!! GAATTGTGAAATAAATAATA+TGG + chr2.2:15392892-15392911 None:intergenic 15.0%
!!! TATTACAAAGAATTTTATCT+AGG - chr2.2:15392595-15392614 MS.gene059867:intron 15.0%
!!! TTAAAAAAGAGTTTGATAAT+TGG + chr2.2:15392860-15392879 None:intergenic 15.0%
!! AAATAAATAATATGGTGACA+AGG + chr2.2:15392884-15392903 None:intergenic 20.0%
!! AATTATCCCATAAAACAATT+TGG + chr2.2:15392976-15392995 None:intergenic 20.0%
!! CAAATAATAATTTCATGGAT+TGG - chr2.2:15393307-15393326 MS.gene059867:CDS 20.0%
!! GTCAATATTTGATATTTCAA+AGG - chr2.2:15392720-15392739 MS.gene059867:intron 20.0%
!!! AGGAAGTGAATATTTTAAAA+TGG + chr2.2:15392928-15392947 None:intergenic 20.0%
!!! ATATTTTAAAATGGAACAAG+AGG + chr2.2:15392919-15392938 None:intergenic 20.0%
!!! GATTGAACAACAAAATTTTT+AGG + chr2.2:15392804-15392823 None:intergenic 20.0%
!!! GTTTTACCAAATTGTTTTAT+GGG - chr2.2:15392967-15392986 MS.gene059867:intron 20.0%
!!! TGTTTTACCAAATTGTTTTA+TGG - chr2.2:15392966-15392985 MS.gene059867:intron 20.0%
! AATGAACGTATATAATACCT+TGG + chr2.2:15392474-15392493 None:intergenic 25.0%
! GACAAGATTATAACAAATGA+AGG - chr2.2:15392326-15392345 MS.gene059867:CDS 25.0%
! TGCTGCAAATAATAATTTCA+TGG - chr2.2:15393302-15393321 MS.gene059867:CDS 25.0%
! TTAAAAAATTGGGTGATACA+TGG - chr2.2:15392669-15392688 MS.gene059867:intron 25.0%
!! AAATGATTTTACTCAAGGAA+TGG - chr2.2:15393575-15393594 MS.gene059867:CDS 25.0%
!! AATGATTTTACTCAAGGAAT+GGG - chr2.2:15393576-15393595 MS.gene059867:CDS 25.0%
!!! AAAGCACTTGTTTTTTATGT+TGG - chr2.2:15392368-15392387 MS.gene059867:CDS 25.0%
!!! ATGCATAATCCAATTAGTTT+TGG + chr2.2:15392411-15392430 None:intergenic 25.0%
ACAAATGAAGGTAGAAAAGT+TGG - chr2.2:15392338-15392357 MS.gene059867:CDS 30.0%
ATTTCTTTAGTCCAAGAGAT+AGG - chr2.2:15392237-15392256 MS.gene059867:CDS 30.0%
CAATTTGGTAAAACAGCAAA+AGG + chr2.2:15392961-15392980 None:intergenic 30.0%
CGTTGTGAAATTAACTTACT+TGG + chr2.2:15392091-15392110 None:intergenic 30.0%
TAGGCTGATGATTTGAAAAT+GGG - chr2.2:15392614-15392633 MS.gene059867:intron 30.0%
! AAGAGTTTGATAATTGGCAA+AGG + chr2.2:15392854-15392873 None:intergenic 30.0%
! AGAGTTTGATAATTGGCAAA+GGG + chr2.2:15392853-15392872 None:intergenic 30.0%
! CAAGGAATGATGAATTTTAG+TGG - chr2.2:15393384-15393403 MS.gene059867:intron 30.0%
! GGTTCAAATGATTTTACTCA+AGG - chr2.2:15393570-15393589 MS.gene059867:CDS 30.0%
!! GTGATTAATTTGTGTAGGTA+AGG - chr2.2:15392190-15392209 MS.gene059867:CDS 30.0%
!! TGTGTGTGATTAATTTGTGT+AGG - chr2.2:15392185-15392204 MS.gene059867:CDS 30.0%
AAACAATGGTCGTCAATTTG+TGG + chr2.2:15393204-15393223 None:intergenic 35.0%
AGAGTCCAATTGACATAATG+TGG + chr2.2:15393439-15393458 None:intergenic 35.0%
AGTCCAATTGACATAATGTG+GGG + chr2.2:15393437-15393456 None:intergenic 35.0%
ATCTTTACAAATTCGACCCA+TGG - chr2.2:15392059-15392078 MS.gene059867:CDS 35.0%
CTAGGCTGATGATTTGAAAA+TGG - chr2.2:15392613-15392632 MS.gene059867:intron 35.0%
GAATACACTCAATACAGCAA+CGG - chr2.2:15393129-15393148 MS.gene059867:CDS 35.0%
GAGTCCAATTGACATAATGT+GGG + chr2.2:15393438-15393457 None:intergenic 35.0%
GATTCATCTTCTCTTCTTGT+TGG + chr2.2:15393269-15393288 None:intergenic 35.0%
GCACAAAAACCTATTCCAAA+TGG - chr2.2:15393090-15393109 MS.gene059867:intron 35.0%
TATAATCTTGTCTGTTCCAG+TGG + chr2.2:15392318-15392337 None:intergenic 35.0%
TATCCCCACATTATGTCAAT+TGG - chr2.2:15393431-15393450 MS.gene059867:intron 35.0%
TATCTATGTCGTAAAGTAGC+TGG - chr2.2:15392001-15392020 MS.gene059867:CDS 35.0%
TCTTTACAAATTCGACCCAT+GGG - chr2.2:15392060-15392079 MS.gene059867:CDS 35.0%
TGAATTGCAGCTAGATGATT+GGG - chr2.2:15393035-15393054 MS.gene059867:intron 35.0%
TTGAATTGCAGCTAGATGAT+TGG - chr2.2:15393034-15393053 MS.gene059867:intron 35.0%
TTTGGATACTTCCTATCTCT+TGG + chr2.2:15392251-15392270 None:intergenic 35.0%
! CGATTTTGAACACAGTAACA+GGG - chr2.2:15393343-15393362 MS.gene059867:CDS 35.0%
! GTGTAGGTAAGGCAATTTTT+GGG - chr2.2:15392201-15392220 MS.gene059867:CDS 35.0%
! TATGTTGGTAAAGCTCCTAA+AGG - chr2.2:15392383-15392402 MS.gene059867:CDS 35.0%
! TCGATTTTGAACACAGTAAC+AGG - chr2.2:15393342-15393361 MS.gene059867:CDS 35.0%
! TGTAGGTAAGGCAATTTTTG+GGG - chr2.2:15392202-15392221 MS.gene059867:CDS 35.0%
! TGTGTAGGTAAGGCAATTTT+TGG - chr2.2:15392200-15392219 MS.gene059867:CDS 35.0%
!! AGAGATAGGAAGTATCCAAA+TGG - chr2.2:15392251-15392270 MS.gene059867:CDS 35.0%
!! CAATTTTTGGGGAGAAAGAA+TGG - chr2.2:15392213-15392232 MS.gene059867:CDS 35.0%
!! CTAAAGGCACCAAAACTAAT+TGG - chr2.2:15392399-15392418 MS.gene059867:CDS 35.0%
!! GAGATAGGAAGTATCCAAAT+GGG - chr2.2:15392252-15392271 MS.gene059867:CDS 35.0%
!!! CAATTAGTTTTGGTGCCTTT+AGG + chr2.2:15392401-15392420 None:intergenic 35.0%
AACAAGAAGCTCTTCATCAG+TGG + chr2.2:15391978-15391997 None:intergenic 40.0%
AACTTACTTGGAAGAACCCA+TGG + chr2.2:15392079-15392098 None:intergenic 40.0%
ACAAGAAGCTCTTCATCAGT+GGG + chr2.2:15391977-15391996 None:intergenic 40.0%
ACAGTAACAGGGTTTCAAGA+CGG - chr2.2:15393354-15393373 MS.gene059867:CDS 40.0%
ACTTACTTGGAAGAACCCAT+GGG + chr2.2:15392078-15392097 None:intergenic 40.0%
AGGAATGGGATACACTAATC+CGG - chr2.2:15393590-15393609 MS.gene059867:CDS 40.0%
ATTGGACTCTTCCGTTATCA+CGG - chr2.2:15393449-15393468 MS.gene059867:intron 40.0%
CAAATAGAGTAGCTGGATCT+GGG - chr2.2:15392282-15392301 MS.gene059867:CDS 40.0%
CAGCAAAAGGTCAAAAACAG+AGG + chr2.2:15392948-15392967 None:intergenic 40.0%
CTTGACTCTTCACGAAACAA+CGG - chr2.2:15392443-15392462 MS.gene059867:CDS 40.0%
GACATAATGTGGGGATAGAA+GGG + chr2.2:15393428-15393447 None:intergenic 40.0%
GGTAAACTCAATTGTGCAAG+AGG + chr2.2:15391935-15391954 None:intergenic 40.0%
TGACATAATGTGGGGATAGA+AGG + chr2.2:15393429-15393448 None:intergenic 40.0%
TGTTGGAATCCAAATCCAAC+TGG + chr2.2:15393648-15393667 None:intergenic 40.0%
TTTCAAGACGGTCAAACTCA+AGG - chr2.2:15393366-15393385 MS.gene059867:intron 40.0%
! AACCAAGTTGAGAATTCGTC+TGG - chr2.2:15393534-15393553 MS.gene059867:CDS 40.0%
! ACCAAGTTGAGAATTCGTCT+GGG - chr2.2:15393535-15393554 MS.gene059867:CDS 40.0%
!!! GCTAGTTTTCTCCGTGATAA+CGG + chr2.2:15393463-15393482 None:intergenic 40.0%
ACAAGGCCAAATAGAGTAGC+TGG - chr2.2:15392275-15392294 MS.gene059867:CDS 45.0%
ACCCAGACGAATTCTCAACT+TGG + chr2.2:15393539-15393558 None:intergenic 45.0%
ACGTGTCAACTCGCTAAGAA+CGG - chr2.2:15393233-15393252 MS.gene059867:CDS 45.0%
ACTGAAGAGGAGGTTCAAAG+TGG - chr2.2:15393501-15393520 MS.gene059867:CDS 45.0%
CAAATCCAACTGGTTGAACC+GGG + chr2.2:15393638-15393657 None:intergenic 45.0%
CAAGAAGCTCTTCATCAGTG+GGG + chr2.2:15391976-15391995 None:intergenic 45.0%
CCAAATAGAGTAGCTGGATC+TGG - chr2.2:15392281-15392300 MS.gene059867:CDS 45.0%
CCAAATCCAACTGGTTGAAC+CGG + chr2.2:15393639-15393658 None:intergenic 45.0%
CCAGATCCAGCTACTCTATT+TGG + chr2.2:15392284-15392303 None:intergenic 45.0%
CTGAAGAGGAGGTTCAAAGT+GGG - chr2.2:15393502-15393521 MS.gene059867:CDS 45.0%
CTTTGAACCTCCTCTTCAGT+CGG + chr2.2:15393501-15393520 None:intergenic 45.0%
GCACAATTGAGTTTACCTCC+TGG - chr2.2:15391938-15391957 MS.gene059867:CDS 45.0%
GGGTAAAATCGAAAACCAGG+AGG + chr2.2:15391956-15391975 None:intergenic 45.0%
GTGGGGTAAAATCGAAAACC+AGG + chr2.2:15391959-15391978 None:intergenic 45.0%
TGAAGAGGAGGTTCAAAGTG+GGG - chr2.2:15393503-15393522 MS.gene059867:CDS 45.0%
TGGGGATAGAAGGGACATAA+AGG + chr2.2:15393419-15393438 None:intergenic 45.0%
! GAAACGACGCCATTTGGAAT+AGG + chr2.2:15393102-15393121 None:intergenic 45.0%
!! CTATTTGGCCTTGTCCCATT+TGG + chr2.2:15392269-15392288 None:intergenic 45.0%
!! GGAAGTATCCAAATGGGACA+AGG - chr2.2:15392258-15392277 MS.gene059867:CDS 45.0%
!!! TCGTCTGGGTTTTTTCAACG+TGG - chr2.2:15393549-15393568 MS.gene059867:CDS 45.0%
!!! AACAAATTTTTTTAAAAAAT+TGG - chr2.2:15392658-15392677 MS.gene059867:intron 5.0%
!!! ACAAATTTTTTTAAAAAATT+GGG - chr2.2:15392659-15392678 MS.gene059867:intron 5.0%
!!! TATTTATTATTTTTTTAAGA+AGG + chr2.2:15392767-15392786 None:intergenic 5.0%
ACCGGGTACCTAAACCCAAA+CGG + chr2.2:15393621-15393640 None:intergenic 50.0%
ACTAATCCGGTTGACCCGTT+TGG - chr2.2:15393603-15393622 MS.gene059867:CDS 50.0%
ATTCAAGAACGTCGTCGAGG+TGG + chr2.2:15393176-15393195 None:intergenic 50.0%
CACGTGGCAGCTTGAAACAA+TGG + chr2.2:15393218-15393237 None:intergenic 50.0%
CCGGTTCAACCAGTTGGATT+TGG - chr2.2:15393636-15393655 MS.gene059867:CDS 50.0%
CTAAACCCAAACGGGTCAAC+CGG + chr2.2:15393612-15393631 None:intergenic 50.0%
CTAATCCGGTTGACCCGTTT+GGG - chr2.2:15393604-15393623 MS.gene059867:CDS 50.0%
CTGCTTGAAACGACGCCATT+TGG + chr2.2:15393108-15393127 None:intergenic 50.0%
GACTCTTCACGAAACAACGG+TGG - chr2.2:15392446-15392465 MS.gene059867:CDS 50.0%
GAGTAGCTGGATCTGGGTAT+TGG - chr2.2:15392288-15392307 MS.gene059867:CDS 50.0%
GTGATTCAAGAACGTCGTCG+AGG + chr2.2:15393179-15393198 None:intergenic 50.0%
TTCAAGAACGTCGTCGAGGT+GGG + chr2.2:15393175-15393194 None:intergenic 50.0%
! GTTCTTAGCGAGTTGACACG+TGG + chr2.2:15393234-15393253 None:intergenic 50.0%
!! TCTGGGTATTGGAAAGCCAC+TGG - chr2.2:15392299-15392318 MS.gene059867:CDS 50.0%
ACGAAACAACGGTGGCACCA+AGG - chr2.2:15392454-15392473 MS.gene059867:CDS 55.0%
AGGTACCCGGTTCAACCAGT+TGG - chr2.2:15393630-15393649 MS.gene059867:CDS 55.0%
CCGGGTACCTAAACCCAAAC+GGG + chr2.2:15393620-15393639 None:intergenic 55.0%
CTCCTCTTCAGTCGGATGCA+CGG + chr2.2:15393493-15393512 None:intergenic 55.0%
TCCTCTTCAGTCGGATGCAC+GGG + chr2.2:15393492-15393511 None:intergenic 55.0%
! CCCGTTTGGGTTTAGGTACC+CGG - chr2.2:15393617-15393636 MS.gene059867:CDS 55.0%
! CGGTTGACCCGTTTGGGTTT+AGG - chr2.2:15393610-15393629 MS.gene059867:CDS 55.0%
ACCCGTGCATCCGACTGAAG+AGG - chr2.2:15393488-15393507 MS.gene059867:intron 60.0%
CGTGCATCCGACTGAAGAGG+AGG - chr2.2:15393491-15393510 MS.gene059867:CDS 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 15391911 15393671 15391911 ID=MS.gene059867
chr2.2 mRNA 15391911 15393671 15391911 ID=MS.gene059867.t1;Parent=MS.gene059867
chr2.2 exon 15393491 15393671 15393491 ID=MS.gene059867.t1.exon1;Parent=MS.gene059867.t1
chr2.2 CDS 15393491 15393671 15393491 ID=cds.MS.gene059867.t1;Parent=MS.gene059867.t1
chr2.2 exon 15393107 15393375 15393107 ID=MS.gene059867.t1.exon2;Parent=MS.gene059867.t1
chr2.2 CDS 15393107 15393375 15393107 ID=cds.MS.gene059867.t1;Parent=MS.gene059867.t1
chr2.2 exon 15391911 15392537 15391911 ID=MS.gene059867.t1.exon3;Parent=MS.gene059867.t1
chr2.2 CDS 15391911 15392537 15391911 ID=cds.MS.gene059867.t1;Parent=MS.gene059867.t1
Gene Sequence

>MS.gene059867

ATGGGAATTCAAGACAAAGATCCTCTTGCACAATTGAGTTTACCTCCTGGTTTTCGATTTTACCCCACTGATGAAGAGCTTCTTGTTCAATATCTATGTCGTAAAGTAGCTGGTCATCATTTTTCTCTTCAAATCATTGCTGAAATTGATCTTTACAAATTCGACCCATGGGTTCTTCCAAGTAAGTTAATTTCACAACGAATTTGTTTTGTTAGAATCACTGTGAATCATCGTTATTTAAATAATTTGACCTATGTTTTATTCATATTAAAGTTGTGTGTGATTAATTTGTGTAGGTAAGGCAATTTTTGGGGAGAAAGAATGGTATTTCTTTAGTCCAAGAGATAGGAAGTATCCAAATGGGACAAGGCCAAATAGAGTAGCTGGATCTGGGTATTGGAAAGCCACTGGAACAGACAAGATTATAACAAATGAAGGTAGAAAAGTTGGTATAAAAAAAGCACTTGTTTTTTATGTTGGTAAAGCTCCTAAAGGCACCAAAACTAATTGGATTATGCATGAGTATCGACTACTTGACTCTTCACGAAACAACGGTGGCACCAAGGTATTATATACGTTCATTTTTTTTTTTAACTATTTAACTATTTCAAATGTCTAAATTTAGCATTACTAATTTTTACTTAGTATATACACAAATAATTTTAAATTGATCACAATTCTCAATATTACAAAGAATTTTATCTAGGCTGATGATTTGAAAATGGGCAATCAAATATTGAGAATCACAACAAATTTTTTTAAAAAATTGGGTGATACATGGTTTAAATGAATTGCACTCATACATACACGTCAATATTTGATATTTCAAAGGATTAATATTAAATTTTTTTCTCCTTCTTAAAAAAATAATAAATATTTTTTTAATAATTCCTAAAAATTTTGTTGTTCAATCATGATCACAAATTTTATTTTTTGAAACCCTTTGCCAATTATCAAACTCTTTTTTAAACCTTGTCACCATATTATTTATTTCACAATTCACTTCCTCTTGTTCCATTTTAAAATATTCACTTCCTCTGTTTTTGACCTTTTGCTGTTTTACCAAATTGTTTTATGGGATAATTATTATTATTACAACGTTAATTTGTTGAAATTTTTGTTCTTGAATTGCAGCTAGATGATTGGGTTCTATGTCGTATCTACAAGAAAAATTCAAGTGCACAAAAACCTATTCCAAATGGCGTCGTTTCAAGCAGAGAATACACTCAATACAGCAACGGTTCATCGTCTTCTTCATCATCCCACCTCGACGACGTTCTTGAATCACTTCCACAAATTGACGACCATTGTTTCAAGCTGCCACGTGTCAACTCGCTAAGAACGGCGCAACATCACCAACAAGAAGAGAAGATGAATCTTCAAAATTTAAATGCTGCAAATAATAATTTCATGGATTGGTCTAATTCATCATCGATTTTGAACACAGTAACAGGGTTTCAAGACGGTCAAACTCAAGGAATGATGAATTTTAGTGGTTGCAATGACCTTTATGTCCCTTCTATCCCCACATTATGTCAATTGGACTCTTCCGTTATCACGGAGAAAACTAGCAAGATACCCGTGCATCCGACTGAAGAGGAGGTTCAAAGTGGGGCGAGAGCAAACCAAGTTGAGAATTCGTCTGGGTTTTTTCAACGTGGTTCAAATGATTTTACTCAAGGAATGGGATACACTAATCCGGTTGACCCGTTTGGGTTTAGGTACCCGGTTCAACCAGTTGGATTTGGATTCCAACAATGA
Protein sequence

>MS.gene059867.t1

MGIQDKDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIAEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGTRPNRVAGSGYWKATGTDKIITNEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLLDSSRNNGGTKLDDWVLCRIYKKNSSAQKPIPNGVVSSREYTQYSNGSSSSSSSHLDDVLESLPQIDDHCFKLPRVNSLRTAQHHQQEEKMNLQNLNAANNNFMDWSNSSSILNTVTGFQDGQTQGMMNFSGCNDLYVPSIPTLCQLDSSVITEKTSKIPVHPTEEEVQSGARANQVENSSGFFQRGSNDFTQGMGYTNPVDPFGFRYPVQPVGFGFQQ