AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene065178

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065178.t1 MTR_2g079740 96.122 851 12 5 1 836 1 845 0.0 1674
MS.gene065178.t1 MTR_7g060420 51.705 528 216 8 203 720 269 767 1.01e-162 502
MS.gene065178.t1 MTR_8g100005 33.496 818 407 25 25 832 7 697 1.23e-125 395
MS.gene065178.t1 MTR_3g491920 42.075 530 249 14 322 832 195 685 1.13e-120 381
MS.gene065178.t1 MTR_1g007740 43.539 503 232 16 340 832 232 692 1.48e-116 373
MS.gene065178.t1 MTR_8g092890 36.111 504 231 9 341 832 204 628 1.00e-86 290
MS.gene065178.t1 MTR_8g100005 33.392 566 287 15 25 590 7 482 5.87e-85 280
MS.gene065178.t1 MTR_3g095780 42.632 380 190 6 341 720 168 519 1.71e-83 280
MS.gene065178.t1 MTR_4g119620 31.390 223 137 9 467 683 65 277 1.40e-24 106
MS.gene065178.t1 MTR_1g072140 29.954 217 130 10 476 683 65 268 1.10e-18 88.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065178.t1 AT5G54200 57.526 857 278 15 9 840 21 816 0.0 890
MS.gene065178.t1 AT3G15470 57.848 892 282 20 14 836 4 870 0.0 887
MS.gene065178.t1 AT2G37670 52.037 540 190 11 203 719 248 741 4.33e-161 493
MS.gene065178.t1 AT2G37670 52.037 540 190 11 203 719 249 742 5.06e-161 493
MS.gene065178.t1 AT5G02430 52.290 524 222 8 203 720 258 759 1.04e-156 482
MS.gene065178.t1 AT5G53500 41.155 554 245 15 285 832 159 637 1.23e-111 356
MS.gene065178.t1 AT5G53500 41.155 554 245 15 285 832 159 637 1.23e-111 356
MS.gene065178.t1 AT5G24320 41.098 528 240 12 322 832 204 677 8.80e-109 350
MS.gene065178.t1 AT5G24320 40.789 532 240 13 322 832 204 681 8.91e-107 345
MS.gene065178.t1 AT5G42010 39.648 512 233 14 343 831 233 691 1.28e-103 337
MS.gene065178.t1 AT1G64610 39.431 492 239 13 343 831 194 629 1.71e-99 324
MS.gene065178.t1 AT1G64610 39.431 492 239 13 343 831 194 629 1.71e-99 324
MS.gene065178.t1 AT5G42010 47.447 333 161 8 343 673 233 553 7.47e-90 296
MS.gene065178.t1 AT1G48870 32.389 494 245 9 341 833 172 577 2.69e-78 265
MS.gene065178.t1 AT1G48870 32.389 494 245 9 341 833 172 577 2.69e-78 265
MS.gene065178.t1 AT1G48870 32.389 494 245 9 341 833 172 577 2.69e-78 265
MS.gene065178.t1 AT4G02730 29.224 219 138 10 476 687 81 289 2.53e-20 93.6
MS.gene065178.t1 AT3G49660 28.636 220 141 9 471 684 62 271 3.40e-20 93.2
MS.gene065178.t1 AT3G49660 24.198 343 206 13 354 683 11 312 7.05e-13 71.2
MS.gene065178.t1 AT2G16405 25.410 244 146 9 465 683 199 431 1.79e-12 71.2

Find 234 sgRNAs with CRISPR-Local

Find 400 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATATGTTATTTCTTGTTAA+TGG 0.154159 2.4:+17925237 MS.gene065178:CDS
AAACCCGTTTGCTCCTTTAA+AGG 0.187744 2.4:+17925399 MS.gene065178:CDS
GATCTGGTTCATAAGTTTAA+AGG 0.211448 2.4:+17928240 MS.gene065178:CDS
TTTCTTGGTCTTCGTCTTCT+TGG 0.228579 2.4:-17924138 None:intergenic
ATACTTCATTAGTGGATCTT+TGG 0.232896 2.4:+17927632 MS.gene065178:CDS
TCCATTATCAAGATCTCTTA+TGG 0.253771 2.4:-17924593 None:intergenic
GAATGCGATGAAATTGAAAA+AGG 0.255746 2.4:+17924553 MS.gene065178:CDS
ATCATGCAAATGACCTTTAA+AGG 0.262544 2.4:-17925412 None:intergenic
AGTATTAAGTTTAGTTTAGA+TGG 0.278056 2.4:+17925102 MS.gene065178:CDS
CCCTTAACAGTTACGACATA+TGG 0.289130 2.4:+17924200 MS.gene065178:CDS
AAGCTCATAATGGATCAATT+TGG 0.292538 2.4:+17925079 MS.gene065178:CDS
TCAAATCACAAGAAAATTAC+TGG 0.302245 2.4:+17928056 MS.gene065178:CDS
AGTACTGTTCCCGGTAATTC+TGG 0.305266 2.4:+17924421 MS.gene065178:CDS
TCCTTTGGCGGATAATCTTC+TGG 0.309791 2.4:+17925284 MS.gene065178:CDS
TTCCGGTGTTGATTTCTTGC+CGG 0.310114 2.4:+17924495 MS.gene065178:CDS
TGGTAATGGAGGTTGTTCTA+AGG 0.310884 2.4:+17924813 MS.gene065178:CDS
TCTTCTAGAAGAATTCTTTC+CGG 0.314096 2.4:-17924467 None:intergenic
CAAGAAAATTACTGGTTTCC+AGG 0.315246 2.4:+17928064 MS.gene065178:CDS
ATATGTTATTTCTTGTTAAT+GGG 0.320409 2.4:+17925238 MS.gene065178:CDS
AGGGTGAGAGTGAGACAATA+TGG 0.320663 2.4:+17925009 MS.gene065178:CDS
GAAAGGGGAGTTGTTGCTTA+TGG 0.321504 2.4:+17925191 MS.gene065178:CDS
CGGATCGACAAGTTGTTGAT+TGG 0.329763 2.4:+17927682 MS.gene065178:CDS
ACCCGTGACGTTGTCTCCTT+TGG 0.330639 2.4:+17925269 MS.gene065178:CDS
CGGGGATCCGCCAGAATTAC+CGG 0.330665 2.4:-17924431 None:intergenic
GTCAGATTTGGATCGGAATA+TGG 0.333292 2.4:-17924332 None:intergenic
GGAGACAACGTCACGGGTTC+CGG 0.336795 2.4:-17925264 None:intergenic
AATGAGAATGGGTTTGTTCA+TGG 0.340709 2.4:-17923987 None:intergenic
GCCGGTGGTGGTGTTGGAAA+TGG 0.352022 2.4:+17924784 MS.gene065178:CDS
CCTCTCTTGGTCTAAGTCTC+AGG 0.354450 2.4:+17925443 MS.gene065178:CDS
ACTCGTCTTCTTCAAACTAT+TGG 0.355721 2.4:+17924256 MS.gene065178:CDS
AGCCATTCCCTGGCCTGGTA+TGG 0.363748 2.4:+17928587 MS.gene065178:CDS
GAGGGTTCACGATCTGCTTC+AGG 0.366525 2.4:+17928729 MS.gene065178:CDS
GTCAGTATGGATTTCACAAA+TGG 0.367312 2.4:+17928873 MS.gene065178:CDS
AGTCAAGATGGTTCATTTCA+TGG 0.367746 2.4:+17924979 MS.gene065178:CDS
AAAGTGAAGGAGGTTGGTAC+TGG 0.368514 2.4:+17924661 MS.gene065178:CDS
GATGATAGATACTTCATTAG+TGG 0.371354 2.4:+17927624 MS.gene065178:CDS
TCCGGTGTTGATTTCTTGCC+GGG 0.372760 2.4:+17924496 MS.gene065178:CDS
ACCATAAGAGATCTTGATAA+TGG 0.372863 2.4:+17924592 MS.gene065178:CDS
GGTGACACCTTTACTTCTGT+TGG 0.380370 2.4:-17928520 None:intergenic
TAGTAGGAAGTCGTTGAGTT+TGG 0.382361 2.4:+17925335 MS.gene065178:CDS
TCAAAGCCCTCGTGTCAGTA+TGG 0.385856 2.4:+17928860 MS.gene065178:CDS
TCCATATGTCGTAACTGTTA+AGG 0.386442 2.4:-17924201 None:intergenic
ATGGCATTGTAAGGTGGGAT+TGG 0.388194 2.4:-17924313 None:intergenic
TATCATCAACAGGATTAAAC+TGG 0.390022 2.4:-17927608 None:intergenic
CGCATAAGCTCCTGCACAAT+CGG 0.393774 2.4:-17924730 None:intergenic
GGGGAATTCTTCTACTTTGT+CGG 0.397307 2.4:+17924516 MS.gene065178:CDS
ACTTCTGTTGGGCCTGCAAT+CGG 0.398774 2.4:-17928508 None:intergenic
GTGACACCTTTACTTCTGTT+GGG 0.400336 2.4:-17928519 None:intergenic
TTCGTCTTCTTGGTCAGAGT+TGG 0.402171 2.4:-17924128 None:intergenic
GCCTGGTATGGGTGATGCAT+GGG 0.403215 2.4:+17928599 MS.gene065178:CDS
GTTGTTGCTTATGGAGAAAC+AGG 0.403691 2.4:+17925200 MS.gene065178:CDS
AGTACTTCTGATGAACTTCC+TGG 0.405091 2.4:-17928174 None:intergenic
GTGAAAGAAGTTAGAGAAGA+TGG 0.405227 2.4:+17924628 MS.gene065178:CDS
GTTGATGTTGTTGTTGGAGT+TGG 0.406911 2.4:-17924021 None:intergenic
GGCCTGGTATGGGTGATGCA+TGG 0.409184 2.4:+17928598 MS.gene065178:CDS
ACCACGTGAAAGGGCAAAAT+CGG 0.410979 2.4:-17924287 None:intergenic
CCATATGTCGTAACTGTTAA+GGG 0.412326 2.4:-17924200 None:intergenic
CAAGAGATTCAAGCTCATAA+TGG 0.414387 2.4:+17925069 MS.gene065178:CDS
GTTGTTATGACCGTCAGATT+TGG 0.414968 2.4:-17924344 None:intergenic
GTTGGTGTTGATGTTGTTGT+TGG 0.416733 2.4:-17924027 None:intergenic
TTCCGGACGGAGGTTTAGCC+GGG 0.417860 2.4:-17924450 None:intergenic
GATTCATGTTTGGCAGGTTG+TGG 0.418930 2.4:+17925158 MS.gene065178:CDS
TTTACAGTGAAAATGTTCAT+AGG 0.422742 2.4:-17928553 None:intergenic
ATGATGTGCTTGACCTCTCT+TGG 0.423598 2.4:+17925430 MS.gene065178:CDS
TTGTGGAGTCTGAGAGGAAA+GGG 0.424221 2.4:+17925175 MS.gene065178:CDS
ATTCGTAGAAGAAATCTTGT+TGG 0.429715 2.4:-17924057 None:intergenic
TTCTTCTACTTTGTCGGACA+CGG 0.429834 2.4:+17924522 MS.gene065178:CDS
AATGTAAATAGTACTGTTCC+CGG 0.431742 2.4:+17924412 MS.gene065178:CDS
AGGATTGTGTGATTCATGTT+TGG 0.432003 2.4:+17925148 MS.gene065178:CDS
AGTGAGTGCAAACACATGTT+CGG 0.432044 2.4:-17925373 None:intergenic
AGGATTCCCATGTATACATC+TGG 0.438205 2.4:+17928475 MS.gene065178:CDS
TACTGGGAGACAGTTGACTA+TGG 0.438212 2.4:+17924678 MS.gene065178:CDS
TTGTTATACACCTGATGGTC+AGG 0.439552 2.4:+17927734 MS.gene065178:CDS
GATCGGAATATGGCATTGTA+AGG 0.442136 2.4:-17924322 None:intergenic
CTGTGAGGGAGGCTGAAATC+TGG 0.442676 2.4:-17928422 None:intergenic
TGTCTCACTCTCACCCTCTC+AGG 0.442951 2.4:-17925003 None:intergenic
CTTGAACCAACCTGACCATC+AGG 0.443778 2.4:-17927744 None:intergenic
GTTGAGTTTGGACCAGTTTG+TGG 0.447377 2.4:+17925347 MS.gene065178:CDS
TGGCATTGTAAGGTGGGATT+GGG 0.449165 2.4:-17924312 None:intergenic
AGGGGAGGTCGTCCGTTAGT+AGG 0.450408 2.4:+17925319 MS.gene065178:CDS
GCCATTCCCTGGCCTGGTAT+GGG 0.450820 2.4:+17928588 MS.gene065178:CDS
CTTCTGGAGAGGAAGAGAAA+GGG 0.453072 2.4:+17925300 MS.gene065178:CDS
GGTTCGCATATGGAGCATTC+CGG 0.453183 2.4:+17927662 MS.gene065178:CDS
TAGTTCAATGGCGGGTCATA+AGG 0.453276 2.4:+17924882 MS.gene065178:CDS
TCTCGAATACGGGTTGTTGA+TGG 0.453927 2.4:+17928213 MS.gene065178:CDS
ATGAAGTATCTATCATCAAC+AGG 0.454580 2.4:-17927618 None:intergenic
TGGATGCTAAGGTTCGCATA+TGG 0.456377 2.4:+17927652 MS.gene065178:CDS
GTCGTTGTTGCTATCAAGCT+CGG 0.457779 2.4:-17928652 None:intergenic
TAGTGGATCTTTGGATGCTA+AGG 0.458377 2.4:+17927641 MS.gene065178:CDS
ATGACCTTTAAAGGAGCAAA+CGG 0.460221 2.4:-17925403 None:intergenic
AGAGATACTTCGTCGGAGAA+AGG 0.460899 2.4:+17924925 MS.gene065178:CDS
GGGTGAGAGTGAGACAATAT+GGG 0.461483 2.4:+17925010 MS.gene065178:CDS
TCTTCTAGAAGAAGTCATTC+CGG 0.463152 2.4:+17924478 MS.gene065178:CDS
AGTAGAAGAAGAGATAAAAC+AGG 0.465592 2.4:-17924386 None:intergenic
GCACTTGCTCTCATCTTCAA+TGG 0.466256 2.4:+17927075 MS.gene065178:intron
GGTTGTTGATGGTATTGATC+TGG 0.466728 2.4:+17928224 MS.gene065178:CDS
TGCATCACCCATACCAGGCC+AGG 0.466953 2.4:-17928595 None:intergenic
CCGGTGGTGGTGTTGGAAAT+GGG 0.467471 2.4:+17924785 MS.gene065178:CDS
GGTAATGGAGGTTGTTCTAA+GGG 0.468975 2.4:+17924814 MS.gene065178:CDS
AATCTTGTTGGTCTAGTTGT+TGG 0.470295 2.4:-17924045 None:intergenic
GTGAGTGCAAACACATGTTC+GGG 0.470370 2.4:-17925372 None:intergenic
GGAAGAAGAAAGGAGGGAGT+TGG 0.471803 2.4:+17924836 MS.gene065178:CDS
CGGTAATTCTGGCGGATCCC+CGG 0.475497 2.4:+17924432 MS.gene065178:CDS
CATGTTCGGGAACCACAAAC+TGG 0.476756 2.4:-17925359 None:intergenic
GTATTAAGTTTAGTTTAGAT+GGG 0.476966 2.4:+17925103 MS.gene065178:CDS
TTGTGTGATTCATGTTTGGC+AGG 0.477071 2.4:+17925152 MS.gene065178:CDS
TTTCCGGACGGAGGTTTAGC+CGG 0.477265 2.4:-17924451 None:intergenic
AAGAGGAGAGAGAGAGTAAA+CGG 0.478902 2.4:-17924087 None:intergenic
TCAGTAGCCATTCCCTGGCC+TGG 0.479922 2.4:+17928582 MS.gene065178:CDS
CATCTGCTGATTCTCGAATA+CGG 0.481379 2.4:+17928202 MS.gene065178:CDS
ATATTTACCATTTGCTGTGA+GGG 0.481702 2.4:-17928436 None:intergenic
CGTGACGTTGTCTCCTTTGG+CGG 0.482687 2.4:+17925272 MS.gene065178:CDS
ACCGGTGATGTAGCCGGTGG+TGG 0.485090 2.4:+17924772 MS.gene065178:CDS
TGTCATTTATATAATACATC+TGG 0.485507 2.4:+17927869 MS.gene065178:CDS
TCAGCCTCCCTCACAGCAAA+TGG 0.486149 2.4:+17928429 MS.gene065178:CDS
TGTTCTAAGGGGAAGAAGAA+AGG 0.488845 2.4:+17924826 MS.gene065178:CDS
TGGACAAAACAGTGCGGCTG+TGG 0.490355 2.4:+17927095 MS.gene065178:CDS
TCAGTATGGATTTCACAAAT+GGG 0.493127 2.4:+17928874 MS.gene065178:CDS
ATTGTTACTGCTGGTCTTCG+AGG 0.493885 2.4:+17928930 MS.gene065178:CDS
CAATCAACAACTTGTCGATC+CGG 0.494327 2.4:-17927681 None:intergenic
ACGAGTACGACGTTCTGAAA+CGG 0.496617 2.4:-17924239 None:intergenic
TCTGTGCAGGGTGCACTAGT+TGG 0.499249 2.4:+17927830 MS.gene065178:intron
TACAGGTGTAGGAGGATGAT+TGG 0.499821 2.4:-17928688 None:intergenic
TGGAATAAAGTGAAGGAGGT+TGG 0.500727 2.4:+17924655 MS.gene065178:CDS
GATGTAGCCGGTGGTGGTGT+TGG 0.500879 2.4:+17924778 MS.gene065178:CDS
TTCTTGGTCAGAGTTGGAGT+TGG 0.500980 2.4:-17924122 None:intergenic
CGGAATATGGCATTGTAAGG+TGG 0.504983 2.4:-17924319 None:intergenic
CGAGTTGATATCAGCTCAGA+AGG 0.505155 2.4:+17929042 MS.gene065178:CDS
TAGAATTTCTGCAACATGGC+CGG 0.505340 2.4:+17928809 MS.gene065178:CDS
GTCTTCTTGAGAAATGAGAA+TGG 0.506187 2.4:-17923999 None:intergenic
TCTTCTGGAGAGGAAGAGAA+AGG 0.514361 2.4:+17925299 MS.gene065178:CDS
GTTGGAGTTGGAACAAGAGC+AGG 0.515164 2.4:-17924110 None:intergenic
GAGGAGGTCGAGCTCGGCTA+CGG 0.516325 2.4:+17924951 MS.gene065178:CDS
TCTTCTTGAGAAATGAGAAT+GGG 0.517246 2.4:-17923998 None:intergenic
CGTCGGAGAAAGGCGGGAGG+AGG 0.519256 2.4:+17924935 MS.gene065178:CDS
GGTATGGTGATTGTTACTGC+TGG 0.519931 2.4:+17928921 MS.gene065178:CDS
CCCATTTCCAACACCACCAC+CGG 0.520955 2.4:-17924785 None:intergenic
ATCTGCTGATTCTCGAATAC+GGG 0.522317 2.4:+17928203 MS.gene065178:CDS
TGCACTAGTTGGTTCATACA+AGG 0.522538 2.4:+17927841 MS.gene065178:CDS
TGGTCAATCTCCGATTGTGC+AGG 0.524667 2.4:+17924720 MS.gene065178:CDS
TGACCTTTAAAGGAGCAAAC+GGG 0.525285 2.4:-17925402 None:intergenic
GTTGGAACAAGAGCAGGAAG+AGG 0.525322 2.4:-17924104 None:intergenic
GGATTGGGTTACCACGTGAA+AGG 0.527047 2.4:-17924297 None:intergenic
CAAGAGTGTTGCTAGTTCAA+TGG 0.527850 2.4:+17924870 MS.gene065178:CDS
ATACTTCGTCGGAGAAAGGC+GGG 0.528933 2.4:+17924929 MS.gene065178:CDS
GGGAAATATCTTGCTAGTGC+TGG 0.528990 2.4:+17925123 MS.gene065178:CDS
CTAAGGGGAAGAAGAAAGGA+GGG 0.531994 2.4:+17924830 MS.gene065178:CDS
ACCACCACCGGCTACATCAC+CGG 0.532113 2.4:-17924773 None:intergenic
TCCCATGCATCACCCATACC+AGG 0.535005 2.4:-17928600 None:intergenic
TGCAGGCCCAACAGAAGTAA+AGG 0.537014 2.4:+17928513 MS.gene065178:CDS
AGGCGGGAGGAGGTCGAGCT+CGG 0.539651 2.4:+17924945 MS.gene065178:CDS
GTACTTCTGATGAACTTCCT+GGG 0.541085 2.4:-17928173 None:intergenic
GGAATATGGCATTGTAAGGT+GGG 0.542196 2.4:-17924318 None:intergenic
TCCCCGGCTAAACCTCCGTC+CGG 0.543498 2.4:+17924448 MS.gene065178:CDS
CGGTCTCCTCATGATTCTGC+CGG 0.544667 2.4:-17924753 None:intergenic
TCGATAGAATTTCTGCAACA+TGG 0.545086 2.4:+17928805 MS.gene065178:CDS
AGATCACCTTCTCCATAAGC+TGG 0.546253 2.4:+17929071 MS.gene065178:CDS
CGACGTTCTGAAACGGAAGA+AGG 0.546555 2.4:-17924232 None:intergenic
TGTGGAGTCTGAGAGGAAAG+GGG 0.547241 2.4:+17925176 MS.gene065178:CDS
CTCGCAATGGTTGCATGGTG+TGG 0.549432 2.4:-17928762 None:intergenic
AAGTTAGAGAAGATGGAATG+TGG 0.550294 2.4:+17924635 MS.gene065178:CDS
GATTGGGTTACCACGTGAAA+GGG 0.551300 2.4:-17924296 None:intergenic
TCTAAGGGGAAGAAGAAAGG+AGG 0.552386 2.4:+17924829 MS.gene065178:CDS
GGAAATGGGAGTAATGGTAA+TGG 0.552792 2.4:+17924799 MS.gene065178:CDS
TATGACCGTCAGATTTGGAT+CGG 0.552937 2.4:-17924339 None:intergenic
GAGGAATTTGAGATGACGGT+TGG 0.552951 2.4:+17924700 MS.gene065178:CDS
ACTGTTTGTCGCACTCGCAA+TGG 0.554025 2.4:-17928775 None:intergenic
AAGTGAAGGAGGTTGGTACT+GGG 0.559730 2.4:+17924662 MS.gene065178:CDS
GAGGAGACCGGTGATGTAGC+CGG 0.560566 2.4:+17924766 MS.gene065178:CDS
ATTTCTTGTTAATGGGTCGC+CGG 0.562164 2.4:+17925245 MS.gene065178:CDS
TTGGATCGATCTTCATGAGA+TGG 0.562964 2.4:+17927701 MS.gene065178:CDS
TCTTCTACTTTGTCGGACAC+GGG 0.563018 2.4:+17924523 MS.gene065178:CDS
ACCCATACCAGGCCAGGGAA+TGG 0.565424 2.4:-17928589 None:intergenic
ATGTGTCAGTAGCCATTCCC+TGG 0.566854 2.4:+17928577 MS.gene065178:CDS
TCGCACTCGCAATGGTTGCA+TGG 0.572307 2.4:-17928767 None:intergenic
GGTGTTGGAAATGGGAGTAA+TGG 0.576549 2.4:+17924793 MS.gene065178:CDS
TTCATTTCATGGACCTGAGA+GGG 0.576622 2.4:+17924990 MS.gene065178:CDS
GATACTTCGTCGGAGAAAGG+CGG 0.578609 2.4:+17924928 MS.gene065178:CDS
TTTACCATTTGCTGTGAGGG+AGG 0.584191 2.4:-17928433 None:intergenic
AGAGGAAAACTTCGGTGTCG+AGG 0.584446 2.4:+17928710 MS.gene065178:CDS
AGTGTTGCTAGTTCAATGGC+GGG 0.585999 2.4:+17924874 MS.gene065178:CDS
TTCTGGAGAGGAAGAGAAAG+GGG 0.586118 2.4:+17925301 MS.gene065178:CDS
GGGGATCCGCCAGAATTACC+GGG 0.588995 2.4:-17924430 None:intergenic
CGGCAGAATCATGAGGAGAC+CGG 0.589002 2.4:+17924754 MS.gene065178:CDS
GCCAAAGGAGACAACGTCAC+GGG 0.589907 2.4:-17925270 None:intergenic
ATATATTGTTGCTGCAAGTG+AGG 0.589984 2.4:+17928455 MS.gene065178:CDS
GAGGAAAACTTCGGTGTCGA+GGG 0.590606 2.4:+17928711 MS.gene065178:CDS
TCATCCTCCTACACCTGTAG+AGG 0.591962 2.4:+17928692 MS.gene065178:CDS
CTAGAAGAATTCTTTCCGGA+CGG 0.592446 2.4:-17924463 None:intergenic
GAAGAATTCTTTCCGGACGG+AGG 0.594884 2.4:-17924460 None:intergenic
ATATCTTGCTAGTGCTGGTG+AGG 0.595765 2.4:+17925128 MS.gene065178:CDS
GCTACGGATGATAGTCAAGA+TGG 0.595940 2.4:+17924967 MS.gene065178:CDS
AATGGGAGTAATGGTAATGG+AGG 0.600063 2.4:+17924802 MS.gene065178:CDS
AGTAACAATCACCATACCCC+AGG 0.610628 2.4:-17928916 None:intergenic
TCCAGAAGATTATCCGCCAA+AGG 0.612551 2.4:-17925285 None:intergenic
GACAAAGTAGAAGAATTCCC+CGG 0.614493 2.4:-17924514 None:intergenic
GTTGTGGAGTCTGAGAGGAA+AGG 0.615157 2.4:+17925174 MS.gene065178:CDS
TATATTTACCATTTGCTGTG+AGG 0.618354 2.4:-17928437 None:intergenic
TATGGAGGAATTTGAGATGA+CGG 0.619376 2.4:+17924696 MS.gene065178:CDS
GCATCACCCATACCAGGCCA+GGG 0.621344 2.4:-17928594 None:intergenic
GCTGCTTGTTATACACCTGA+TGG 0.625541 2.4:+17927729 MS.gene065178:CDS
GGCAGGTTGTGGAGTCTGAG+AGG 0.626338 2.4:+17925169 MS.gene065178:CDS
TACTTCTGATGAACTTCCTG+GGG 0.627143 2.4:-17928172 None:intergenic
TGGCGGATAATCTTCTGGAG+AGG 0.629487 2.4:+17925289 MS.gene065178:CDS
CCTGAGACTTAGACCAAGAG+AGG 0.630082 2.4:-17925443 None:intergenic
CCGGTGTTGATTTCTTGCCG+GGG 0.630342 2.4:+17924497 MS.gene065178:CDS
TTGTGCAGGAGCTTATGCGC+CGG 0.632452 2.4:+17924734 MS.gene065178:CDS
GAGTGTTGCTAGTTCAATGG+CGG 0.637336 2.4:+17924873 MS.gene065178:CDS
TGGAATGTGGAATAAAGTGA+AGG 0.638048 2.4:+17924648 MS.gene065178:CDS
CAATGGCGGGTCATAAGGAG+AGG 0.638802 2.4:+17924887 MS.gene065178:CDS
TGGAGAGGAAGAGAAAGGGG+AGG 0.640683 2.4:+17925304 MS.gene065178:CDS
CCCCGGCAAGAAATCAACAC+CGG 0.643592 2.4:-17924497 None:intergenic
TGGCGGGTCATAAGGAGAGG+AGG 0.643676 2.4:+17924890 MS.gene065178:CDS
GTTCATTTCATGGACCTGAG+AGG 0.648398 2.4:+17924989 MS.gene065178:CDS
GTAATGGAGGTTGTTCTAAG+GGG 0.650046 2.4:+17924815 MS.gene065178:CDS
TGATGAGAGAGATACTTCGT+CGG 0.650321 2.4:+17924918 MS.gene065178:CDS
ATATTCCGATCCAAATCTGA+CGG 0.651541 2.4:+17924334 MS.gene065178:CDS
ACTCAACGACTTCCTACTAA+CGG 0.653986 2.4:-17925331 None:intergenic
CAGTATGGATTTCACAAATG+GGG 0.657850 2.4:+17928875 MS.gene065178:CDS
CGCCAAAGGAGACAACGTCA+CGG 0.658328 2.4:-17925271 None:intergenic
ACTGTTCCCGGTAATTCTGG+CGG 0.661998 2.4:+17924424 MS.gene065178:CDS
TATGCGCCGGCAGAATCATG+AGG 0.668765 2.4:+17924747 MS.gene065178:CDS
GTTGCTTATGGAGAAACAGG+AGG 0.670617 2.4:+17925203 MS.gene065178:CDS
TGGGAGACAGTTGACTATGG+AGG 0.676143 2.4:+17924681 MS.gene065178:CDS
ACACCTGTAGAGGAAAACTT+CGG 0.682782 2.4:+17928702 MS.gene065178:CDS
GCACTAGTTGGTTCATACAA+GGG 0.684365 2.4:+17927842 MS.gene065178:CDS
TCCGGACGGAGGTTTAGCCG+GGG 0.685261 2.4:-17924449 None:intergenic
AATGTGGAATAAAGTGAAGG+AGG 0.688067 2.4:+17924651 MS.gene065178:CDS
GTGAAATCCATACTGACACG+AGG 0.695168 2.4:-17928867 None:intergenic
ATGTTCATAGGACTGTGTCA+CGG 0.698331 2.4:-17928541 None:intergenic
TGAAATCCATACTGACACGA+GGG 0.711651 2.4:-17928866 None:intergenic
CTTCGTCGGAGAAAGGCGGG+AGG 0.733071 2.4:+17924932 MS.gene065178:CDS
GAGACCGGTGATGTAGCCGG+TGG 0.736645 2.4:+17924769 MS.gene065178:CDS
CTTCAATGGACAAAACAGTG+CGG 0.776088 2.4:+17927089 MS.gene065178:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATCTAATTCAATTTTTAAT+AGG - chr2.4:17927329-17927348 None:intergenic 10.0%
!!! ATCTAATTCAATTTTTAATA+GGG - chr2.4:17927328-17927347 None:intergenic 10.0%
!! AATACAATTTATCATACAAA+TGG - chr2.4:17928328-17928347 None:intergenic 15.0%
!! GTTTAACAACAAAAATAATT+TGG - chr2.4:17926512-17926531 None:intergenic 15.0%
!! TAATTAGCAAAGAAAAAAAA+CGG - chr2.4:17927539-17927558 None:intergenic 15.0%
!!! AATATGTTATTTCTTGTTAA+TGG + chr2.4:17925237-17925256 MS.gene065178:CDS 15.0%
!!! ATATGTTATTTCTTGTTAAT+GGG + chr2.4:17925238-17925257 MS.gene065178:CDS 15.0%
!!! CATTTAAAATGAACAATTTA+GGG + chr2.4:17926101-17926120 MS.gene065178:intron 15.0%
!!! TAAATACAATTTTAGTTTTG+TGG - chr2.4:17926439-17926458 None:intergenic 15.0%
!!! TCAGTATTGATTTTATAATT+GGG + chr2.4:17925675-17925694 MS.gene065178:intron 15.0%
!!! TTATAAACTTCGTTTTTAAT+GGG + chr2.4:17926014-17926033 MS.gene065178:intron 15.0%
!!! TTTATAAACTTCGTTTTTAA+TGG + chr2.4:17926013-17926032 MS.gene065178:intron 15.0%
!! AAATTAACTTCTGATTAAGT+AGG + chr2.4:17926395-17926414 MS.gene065178:intron 20.0%
!! AGACAAAAGTTATTTGTAAT+TGG + chr2.4:17926555-17926574 MS.gene065178:intron 20.0%
!! ATTTACTATTCACTCTTATA+TGG + chr2.4:17925546-17925565 MS.gene065178:intron 20.0%
!! CATATTTAACATAAAAGGTT+TGG + chr2.4:17926604-17926623 MS.gene065178:intron 20.0%
!! GAAACCATATTTAACATAAA+AGG + chr2.4:17926599-17926618 MS.gene065178:intron 20.0%
!! GTACATTTAACTGTTAAAAT+TGG + chr2.4:17925765-17925784 MS.gene065178:intron 20.0%
!!! AAAAACACATAAAAAGTACA+CGG - chr2.4:17927283-17927302 None:intergenic 20.0%
!!! AAAATGGTTTATTTTTCCAA+CGG + chr2.4:17926040-17926059 MS.gene065178:intron 20.0%
!!! AATTTTAGTTTTGTGGTAAA+AGG - chr2.4:17926432-17926451 None:intergenic 20.0%
!!! AGTATTAAGTTTAGTTTAGA+TGG + chr2.4:17925102-17925121 MS.gene065178:CDS 20.0%
!!! ATTAGAACTTTCCAAAATTT+TGG + chr2.4:17928957-17928976 MS.gene065178:intron 20.0%
!!! CAAACCTTTTATGTTAAATA+TGG - chr2.4:17926606-17926625 None:intergenic 20.0%
!!! CTCAGTATTGATTTTATAAT+TGG + chr2.4:17925674-17925693 MS.gene065178:intron 20.0%
!!! GAATTTTGAATAGATTCTTT+GGG + chr2.4:17926874-17926893 MS.gene065178:intron 20.0%
!!! GCATTTAAAATGAACAATTT+AGG + chr2.4:17926100-17926119 MS.gene065178:intron 20.0%
!!! GTATTAAGTTTAGTTTAGAT+GGG + chr2.4:17925103-17925122 MS.gene065178:CDS 20.0%
!!! TGAATTTTGAATAGATTCTT+TGG + chr2.4:17926873-17926892 MS.gene065178:intron 20.0%
!!! TGTCATTTATATAATACATC+TGG + chr2.4:17927869-17927888 MS.gene065178:CDS 20.0%
! AAATGTACTCTTATACAACT+TGG - chr2.4:17925793-17925812 None:intergenic 25.0%
! AACTATATCTTGAATCAGAT+TGG - chr2.4:17927373-17927392 None:intergenic 25.0%
! AAGCAGATAGAAACAAAAAA+AGG - chr2.4:17927564-17927583 None:intergenic 25.0%
! AATCAGTTCAAAACTTTCAA+AGG - chr2.4:17926653-17926672 None:intergenic 25.0%
! AATCATAAGCATCATAACTT+TGG - chr2.4:17928121-17928140 None:intergenic 25.0%
! AATGCGATGAAATTGAAAAA+GGG + chr2.4:17924554-17924573 MS.gene065178:CDS 25.0%
! ATAGTCATACACATATTCTA+TGG - chr2.4:17929006-17929025 None:intergenic 25.0%
! ATATGTTGATGTCTTTACAA+TGG + chr2.4:17926349-17926368 MS.gene065178:intron 25.0%
! CAATAAGGTATGAATCAAAT+AGG - chr2.4:17926749-17926768 None:intergenic 25.0%
! CAGGTAATTTAATGATTTAC+TGG + chr2.4:17928083-17928102 MS.gene065178:intron 25.0%
! CAGTAAATCATTAAATTACC+TGG - chr2.4:17928085-17928104 None:intergenic 25.0%
! GAGTTCTTTAATATCCTATA+GGG + chr2.4:17927468-17927487 MS.gene065178:intron 25.0%
! TCAAATCACAAGAAAATTAC+TGG + chr2.4:17928056-17928075 MS.gene065178:CDS 25.0%
! TGATTCATACCTTATTGTTA+TGG + chr2.4:17926752-17926771 MS.gene065178:intron 25.0%
! TTAAAATGAACAATTTAGGG+AGG + chr2.4:17926104-17926123 MS.gene065178:intron 25.0%
! TTAGTTATTAGAGTACATAC+AGG + chr2.4:17925841-17925860 MS.gene065178:intron 25.0%
! TTTACAGTGAAAATGTTCAT+AGG - chr2.4:17928556-17928575 None:intergenic 25.0%
!! AAAACACATAAAAAGTACAC+GGG - chr2.4:17927282-17927301 None:intergenic 25.0%
!! ATTTTTCCAGATGTATACAT+GGG - chr2.4:17928484-17928503 None:intergenic 25.0%
!! GTTTGATATTTTCTTTGACA+AGG + chr2.4:17926173-17926192 MS.gene065178:intron 25.0%
!! TTCAATTTTTAATAGGGAAG+AGG - chr2.4:17927322-17927341 None:intergenic 25.0%
!!! CAAATTTTAATAACTACCAG+AGG - chr2.4:17926804-17926823 None:intergenic 25.0%
!!! GTATTGATTTTATAATTGGG+TGG + chr2.4:17925678-17925697 MS.gene065178:intron 25.0%
AAAAACAAGATGTTAACCAG+TGG - chr2.4:17927970-17927989 None:intergenic 30.0%
AAATTTGAGTCTGATTGAGT+AGG - chr2.4:17925990-17926009 None:intergenic 30.0%
AAGATGTCTGTTGAATAAAG+CGG + chr2.4:17926263-17926282 MS.gene065178:intron 30.0%
AATAAAGCGGTAACTTACTT+AGG + chr2.4:17926276-17926295 MS.gene065178:intron 30.0%
AATGTAAATAGTACTGTTCC+CGG + chr2.4:17924412-17924431 MS.gene065178:CDS 30.0%
ACCATAAGAGATCTTGATAA+TGG + chr2.4:17924592-17924611 MS.gene065178:CDS 30.0%
AGAGGATGTTTATGTAAACT+AGG + chr2.4:17926712-17926731 MS.gene065178:intron 30.0%
AGGATGGTTATTTGTAACTT+GGG + chr2.4:17926296-17926315 MS.gene065178:intron 30.0%
AGTAGAAGAAGAGATAAAAC+AGG - chr2.4:17924389-17924408 None:intergenic 30.0%
ATACTCTATTCTGACAATTG+TGG + chr2.4:17927944-17927963 MS.gene065178:intron 30.0%
ATCATGCAAATGACCTTTAA+AGG - chr2.4:17925415-17925434 None:intergenic 30.0%
ATCTTGAATCAGATTGGATA+GGG - chr2.4:17927367-17927386 None:intergenic 30.0%
ATGCGATGAAATTGAAAAAG+GGG + chr2.4:17924555-17924574 MS.gene065178:CDS 30.0%
ATGTACACTTATATGCAACT+TGG - chr2.4:17925751-17925770 None:intergenic 30.0%
ATTCGTAGAAGAAATCTTGT+TGG - chr2.4:17924060-17924079 None:intergenic 30.0%
GAATGCGATGAAATTGAAAA+AGG + chr2.4:17924553-17924572 MS.gene065178:CDS 30.0%
GATGATAGATACTTCATTAG+TGG + chr2.4:17927624-17927643 MS.gene065178:CDS 30.0%
GGAGTTCTTTAATATCCTAT+AGG + chr2.4:17927467-17927486 MS.gene065178:intron 30.0%
TAGCAAAGAAAAAAAACGGA+GGG - chr2.4:17927535-17927554 None:intergenic 30.0%
TAGGATGGTTATTTGTAACT+TGG + chr2.4:17926295-17926314 MS.gene065178:intron 30.0%
TATATACATGCACATTAGAG+TGG - chr2.4:17927249-17927268 None:intergenic 30.0%
TATCATCAACAGGATTAAAC+TGG - chr2.4:17927611-17927630 None:intergenic 30.0%
TATCTTGAATCAGATTGGAT+AGG - chr2.4:17927368-17927387 None:intergenic 30.0%
TATTTGTCTTCACTGCATAT+AGG + chr2.4:17927432-17927451 MS.gene065178:intron 30.0%
TCAGTATGGATTTCACAAAT+GGG + chr2.4:17928874-17928893 MS.gene065178:CDS 30.0%
TCCATTATCAAGATCTCTTA+TGG - chr2.4:17924596-17924615 None:intergenic 30.0%
TCGTAACATTGAATGTAAAG+TGG - chr2.4:17926534-17926553 None:intergenic 30.0%
TCTTCTTGAGAAATGAGAAT+GGG - chr2.4:17924001-17924020 None:intergenic 30.0%
TGCGAAGTATAAACATTACA+AGG - chr2.4:17927046-17927065 None:intergenic 30.0%
TTAGCAAAGAAAAAAAACGG+AGG - chr2.4:17927536-17927555 None:intergenic 30.0%
TTAGTTAAATTGTCTGTGCA+GGG + chr2.4:17927818-17927837 MS.gene065178:intron 30.0%
TTCTTTAATATCCTATAGGG+TGG + chr2.4:17927471-17927490 MS.gene065178:intron 30.0%
! ATACTTCATTAGTGGATCTT+TGG + chr2.4:17927632-17927651 MS.gene065178:CDS 30.0%
! ATGAAGTATCTATCATCAAC+AGG - chr2.4:17927621-17927640 None:intergenic 30.0%
! CATTTTTCCAGATGTATACA+TGG - chr2.4:17928485-17928504 None:intergenic 30.0%
! GATCTGGTTCATAAGTTTAA+AGG + chr2.4:17928240-17928259 MS.gene065178:CDS 30.0%
! TCTTCTAGAAGAATTCTTTC+CGG - chr2.4:17924470-17924489 None:intergenic 30.0%
! TTTTCTTTGACAAGGAAACA+TGG + chr2.4:17926181-17926200 MS.gene065178:intron 30.0%
!! AAGCTCATAATGGATCAATT+TGG + chr2.4:17925079-17925098 MS.gene065178:CDS 30.0%
!! ATATTTACCATTTGCTGTGA+GGG - chr2.4:17928439-17928458 None:intergenic 30.0%
!! CGTTTTTAATGGGTCTAAAA+TGG + chr2.4:17926024-17926043 MS.gene065178:intron 30.0%
!! TATATTTACCATTTGCTGTG+AGG - chr2.4:17928440-17928459 None:intergenic 30.0%
!! TGAATTTCTGAAGTCTGAAA+TGG - chr2.4:17927782-17927801 None:intergenic 30.0%
!! TTGGATAGGTCTTTTTGTTT+TGG + chr2.4:17925480-17925499 MS.gene065178:intron 30.0%
!!! ATTTTTTCACACAGTGACTA+TGG + chr2.4:17927145-17927164 MS.gene065178:CDS 30.0%
!!! TGTTGTTGTTGTTGTTTTCT+TGG - chr2.4:17924156-17924175 None:intergenic 30.0%
!!! TTAGCTTCTGTTTTTTGGAT+AGG + chr2.4:17925466-17925485 MS.gene065178:intron 30.0%
!!! TTAGTTTTGTGGTAAAAGGA+TGG - chr2.4:17926428-17926447 None:intergenic 30.0%
AACTGATGTAAGTTTCTTGC+AGG + chr2.4:17928381-17928400 MS.gene065178:intron 35.0%
AAGCCAATTCATCAGTTCAT+CGG - chr2.4:17925609-17925628 None:intergenic 35.0%
AAGTCAAAAAATGTCAGCCT+GGG + chr2.4:17928899-17928918 MS.gene065178:CDS 35.0%
AAGTTAGAGAAGATGGAATG+TGG + chr2.4:17924635-17924654 MS.gene065178:CDS 35.0%
AATGTGGAATAAAGTGAAGG+AGG + chr2.4:17924651-17924670 MS.gene065178:CDS 35.0%
ACTCGTCTTCTTCAAACTAT+TGG + chr2.4:17924256-17924275 MS.gene065178:CDS 35.0%
AGGATTGTGTGATTCATGTT+TGG + chr2.4:17925148-17925167 MS.gene065178:CDS 35.0%
AGGTTTGGATCCTATTAAAG+AGG + chr2.4:17926619-17926638 MS.gene065178:intron 35.0%
AGTCAAGATGGTTCATTTCA+TGG + chr2.4:17924979-17924998 MS.gene065178:CDS 35.0%
AGTCTTAAAAACCTGTACTG+TGG + chr2.4:17925908-17925927 MS.gene065178:intron 35.0%
ATATATTGTTGCTGCAAGTG+AGG + chr2.4:17928455-17928474 MS.gene065178:CDS 35.0%
ATATTCCGATCCAAATCTGA+CGG + chr2.4:17924334-17924353 MS.gene065178:CDS 35.0%
ATGGTCTCTTATATTCGAAG+TGG - chr2.4:17928987-17929006 None:intergenic 35.0%
CAAGAGATTCAAGCTCATAA+TGG + chr2.4:17925069-17925088 MS.gene065178:CDS 35.0%
CAGTATGGATTTCACAAATG+GGG + chr2.4:17928875-17928894 MS.gene065178:CDS 35.0%
CCATATGTCGTAACTGTTAA+GGG - chr2.4:17924203-17924222 None:intergenic 35.0%
CCTCTCCAATGTAAACTAAA+GGG - chr2.4:17926697-17926716 None:intergenic 35.0%
CCTTATTGTTATGGTAACAC+CGG + chr2.4:17926761-17926780 MS.gene065178:intron 35.0%
CTAAATTTCAACCACCCTAT+AGG - chr2.4:17927485-17927504 None:intergenic 35.0%
CTATAGGGTGGTTGAAATTT+AGG + chr2.4:17927483-17927502 MS.gene065178:intron 35.0%
CTCTCCAATGTAAACTAAAG+GGG - chr2.4:17926696-17926715 None:intergenic 35.0%
CTTAGTTAAATTGTCTGTGC+AGG + chr2.4:17927817-17927836 MS.gene065178:intron 35.0%
GCATATAGGACAAGTTATAC+AGG + chr2.4:17927446-17927465 MS.gene065178:intron 35.0%
GGATGGTTATTTGTAACTTG+GGG + chr2.4:17926297-17926316 MS.gene065178:intron 35.0%
GGTTTGGATCCTATTAAAGA+GGG + chr2.4:17926620-17926639 MS.gene065178:intron 35.0%
GTCAGTATGGATTTCACAAA+TGG + chr2.4:17928873-17928892 MS.gene065178:CDS 35.0%
GTCTTAAAAACCTGTACTGT+GGG + chr2.4:17925909-17925928 MS.gene065178:intron 35.0%
GTCTTCTTGAGAAATGAGAA+TGG - chr2.4:17924002-17924021 None:intergenic 35.0%
GTGAAAGAAGTTAGAGAAGA+TGG + chr2.4:17924628-17924647 MS.gene065178:CDS 35.0%
GTTTGGATCCTATTAAAGAG+GGG + chr2.4:17926621-17926640 MS.gene065178:intron 35.0%
TAAGTCAAAAAATGTCAGCC+TGG + chr2.4:17928898-17928917 MS.gene065178:CDS 35.0%
TACAAGGATGATCTAAACAC+TGG - chr2.4:17927030-17927049 None:intergenic 35.0%
TCCATATGTCGTAACTGTTA+AGG - chr2.4:17924204-17924223 None:intergenic 35.0%
TCCTCTCCAATGTAAACTAA+AGG - chr2.4:17926698-17926717 None:intergenic 35.0%
TCGATAGAATTTCTGCAACA+TGG + chr2.4:17928805-17928824 MS.gene065178:CDS 35.0%
TCTCCAATGTAAACTAAAGG+GGG - chr2.4:17926695-17926714 None:intergenic 35.0%
TGGAATGTGGAATAAAGTGA+AGG + chr2.4:17924648-17924667 MS.gene065178:CDS 35.0%
TGTATGACTATATGTCACAG+CGG + chr2.4:17929015-17929034 MS.gene065178:intron 35.0%
TGTCACAGTGAAAAGATTTC+TGG + chr2.4:17925948-17925967 MS.gene065178:intron 35.0%
TTGAATAGATTCTTTGGGCA+GGG + chr2.4:17926879-17926898 MS.gene065178:intron 35.0%
TTTGAATAGATTCTTTGGGC+AGG + chr2.4:17926878-17926897 MS.gene065178:intron 35.0%
! AATCTTGTTGGTCTAGTTGT+TGG - chr2.4:17924048-17924067 None:intergenic 35.0%
! ATGACCTTTAAAGGAGCAAA+CGG - chr2.4:17925406-17925425 None:intergenic 35.0%
! GAAGTGGCAATCCAAAATTT+TGG - chr2.4:17928971-17928990 None:intergenic 35.0%
! GACATGCATGATACATTTTC+TGG + chr2.4:17928621-17928640 MS.gene065178:CDS 35.0%
! GCTAGAAGAAGTTTTTCTTC+CGG - chr2.4:17928831-17928850 None:intergenic 35.0%
! TATGGAGGAATTTGAGATGA+CGG + chr2.4:17924696-17924715 MS.gene065178:CDS 35.0%
! TCAAACACATTTGTTGAGCT+GGG - chr2.4:17926466-17926485 None:intergenic 35.0%
! TCTTCTAGAAGAAGTCATTC+CGG + chr2.4:17924478-17924497 MS.gene065178:CDS 35.0%
! TTCAAACACATTTGTTGAGC+TGG - chr2.4:17926467-17926486 None:intergenic 35.0%
!! AGTTTTAGTGACTCTCCTTT+CGG + chr2.4:17925873-17925892 MS.gene065178:intron 35.0%
!! CAAGAAAATTACTGGTTTCC+AGG + chr2.4:17928064-17928083 MS.gene065178:CDS 35.0%
!!! CATCGTTGGCTTTTGTTAAA+AGG + chr2.4:17925569-17925588 MS.gene065178:intron 35.0%
!!! GGTTTTTTCCCCTCTTTAAT+AGG - chr2.4:17926632-17926651 None:intergenic 35.0%
!!! TCAGGTTAGCTTCTGTTTTT+TGG + chr2.4:17925461-17925480 MS.gene065178:intron 35.0%
AAAAAAAACGGAGGGAACGA+GGG - chr2.4:17927527-17927546 None:intergenic 40.0%
AAACCCGTTTGCTCCTTTAA+AGG + chr2.4:17925399-17925418 MS.gene065178:CDS 40.0%
AAATGCCGTCTTTCCAAGAA+AGG - chr2.4:17926086-17926105 None:intergenic 40.0%
AAGAGGAGAGAGAGAGTAAA+CGG - chr2.4:17924090-17924109 None:intergenic 40.0%
AAGCGGTAACTTACTTAGGA+TGG + chr2.4:17926280-17926299 MS.gene065178:intron 40.0%
AATACATCTGGTACTGTCAG+AGG + chr2.4:17927881-17927900 MS.gene065178:intron 40.0%
AATTGTGCCTTGCGCATAAT+TGG - chr2.4:17927403-17927422 None:intergenic 40.0%
ACACCTGTAGAGGAAAACTT+CGG + chr2.4:17928702-17928721 MS.gene065178:CDS 40.0%
ACTCAACGACTTCCTACTAA+CGG - chr2.4:17925334-17925353 None:intergenic 40.0%
ACTGCAATAATGCAACCGAA+AGG - chr2.4:17925891-17925910 None:intergenic 40.0%
AGGATTCCCATGTATACATC+TGG + chr2.4:17928475-17928494 MS.gene065178:CDS 40.0%
AGTACTTCTGATGAACTTCC+TGG - chr2.4:17928177-17928196 None:intergenic 40.0%
AGTCAAAAAATGTCAGCCTG+GGG + chr2.4:17928900-17928919 MS.gene065178:CDS 40.0%
AGTGAGTGCAAACACATGTT+CGG - chr2.4:17925376-17925395 None:intergenic 40.0%
ATGACTGCAACTCAGGTTTA+GGG - chr2.4:17927221-17927240 None:intergenic 40.0%
ATGTTCATAGGACTGTGTCA+CGG - chr2.4:17928544-17928563 None:intergenic 40.0%
ATTGTTATGGTAACACCGGT+GGG + chr2.4:17926765-17926784 MS.gene065178:intron 40.0%
CAATCAACAACTTGTCGATC+CGG - chr2.4:17927684-17927703 None:intergenic 40.0%
CCCTTAACAGTTACGACATA+TGG + chr2.4:17924200-17924219 MS.gene065178:CDS 40.0%
CTAGAAGAATTCTTTCCGGA+CGG - chr2.4:17924466-17924485 None:intergenic 40.0%
CTTCAATGGACAAAACAGTG+CGG + chr2.4:17927089-17927108 MS.gene065178:CDS 40.0%
GAATCAGATTGGATAGGGAT+AGG - chr2.4:17927362-17927381 None:intergenic 40.0%
GACAAAGTAGAAGAATTCCC+CGG - chr2.4:17924517-17924536 None:intergenic 40.0%
GATCGGAATATGGCATTGTA+AGG - chr2.4:17924325-17924344 None:intergenic 40.0%
GGAAATGGGAGTAATGGTAA+TGG + chr2.4:17924799-17924818 MS.gene065178:CDS 40.0%
GGAATATGGCATTGTAAGGT+GGG - chr2.4:17924321-17924340 None:intergenic 40.0%
GGGGAATTCTTCTACTTTGT+CGG + chr2.4:17924516-17924535 MS.gene065178:CDS 40.0%
GGTTATTTGTAACTTGGGGT+GGG + chr2.4:17926301-17926320 MS.gene065178:intron 40.0%
GTAAACTAAAGGGGGAAGTT+TGG - chr2.4:17926687-17926706 None:intergenic 40.0%
GTACTTCTGATGAACTTCCT+GGG - chr2.4:17928176-17928195 None:intergenic 40.0%
GTCAGATTTGGATCGGAATA+TGG - chr2.4:17924335-17924354 None:intergenic 40.0%
GTGACACCTTTACTTCTGTT+GGG - chr2.4:17928522-17928541 None:intergenic 40.0%
GTTATTTGTAACTTGGGGTG+GGG + chr2.4:17926302-17926321 MS.gene065178:intron 40.0%
GTTGTTATGACCGTCAGATT+TGG - chr2.4:17924347-17924366 None:intergenic 40.0%
GTTTCTATCTGCTTTCTGTC+TGG + chr2.4:17927570-17927589 MS.gene065178:intron 40.0%
TACTTCTGATGAACTTCCTG+GGG - chr2.4:17928175-17928194 None:intergenic 40.0%
TAGAATTTCTGCAACATGGC+CGG + chr2.4:17928809-17928828 MS.gene065178:CDS 40.0%
TAGTAGGAAGTCGTTGAGTT+TGG + chr2.4:17925335-17925354 MS.gene065178:CDS 40.0%
TATGACCGTCAGATTTGGAT+CGG - chr2.4:17924342-17924361 None:intergenic 40.0%
TATTGTTATGGTAACACCGG+TGG + chr2.4:17926764-17926783 MS.gene065178:intron 40.0%
TCACTCTTATATGGCATCGT+TGG + chr2.4:17925555-17925574 MS.gene065178:intron 40.0%
TCAGTTTGATCAGCACGAAT+TGG - chr2.4:17928367-17928386 None:intergenic 40.0%
TGAAATCCATACTGACACGA+GGG - chr2.4:17928869-17928888 None:intergenic 40.0%
TGAATAGATTCTTTGGGCAG+GGG + chr2.4:17926880-17926899 MS.gene065178:intron 40.0%
TGACCGATGAACTGATGAAT+TGG + chr2.4:17925603-17925622 MS.gene065178:intron 40.0%
TGATGAGAGAGATACTTCGT+CGG + chr2.4:17924918-17924937 MS.gene065178:CDS 40.0%
TGCTTTAGTGAACTGTGATG+TGG + chr2.4:17926233-17926252 MS.gene065178:intron 40.0%
TGGAATAAAGTGAAGGAGGT+TGG + chr2.4:17924655-17924674 MS.gene065178:CDS 40.0%
TGGTTATTTGTAACTTGGGG+TGG + chr2.4:17926300-17926319 MS.gene065178:intron 40.0%
TTCATTTCATGGACCTGAGA+GGG + chr2.4:17924990-17925009 MS.gene065178:CDS 40.0%
TTCTTCTACTTTGTCGGACA+CGG + chr2.4:17924522-17924541 MS.gene065178:CDS 40.0%
TTGGATCGATCTTCATGAGA+TGG + chr2.4:17927701-17927720 MS.gene065178:CDS 40.0%
TTGTGATTCTAGGCCTTTCT+TGG + chr2.4:17926070-17926089 MS.gene065178:intron 40.0%
TTGTGTGATTCATGTTTGGC+AGG + chr2.4:17925152-17925171 MS.gene065178:CDS 40.0%
TTGTTATACACCTGATGGTC+AGG + chr2.4:17927734-17927753 MS.gene065178:CDS 40.0%
! AAGTTTTCCTCTACAGGTGT+AGG - chr2.4:17928702-17928721 None:intergenic 40.0%
! ATTTCTTGTTAATGGGTCGC+CGG + chr2.4:17925245-17925264 MS.gene065178:CDS 40.0%
! CAAACACATTTGTTGAGCTG+GGG - chr2.4:17926465-17926484 None:intergenic 40.0%
! CCCTTTAGTTTACATTGGAG+AGG + chr2.4:17926694-17926713 MS.gene065178:intron 40.0%
! CTTCCCCCTTTAGTTTACAT+TGG + chr2.4:17926689-17926708 MS.gene065178:intron 40.0%
! GCACTAGTTGGTTCATACAA+GGG + chr2.4:17927842-17927861 MS.gene065178:CDS 40.0%
! GTAATGGAGGTTGTTCTAAG+GGG + chr2.4:17924815-17924834 MS.gene065178:CDS 40.0%
! GTTGATGTTGTTGTTGGAGT+TGG - chr2.4:17924024-17924043 None:intergenic 40.0%
! GTTGTTGCTTATGGAGAAAC+AGG + chr2.4:17925200-17925219 MS.gene065178:CDS 40.0%
! TACAGGTTTTTGCCAGCTTA+TGG - chr2.4:17929086-17929105 None:intergenic 40.0%
! TAGTGGATCTTTGGATGCTA+AGG + chr2.4:17927641-17927660 MS.gene065178:CDS 40.0%
! TGACCTTTAAAGGAGCAAAC+GGG - chr2.4:17925405-17925424 None:intergenic 40.0%
! TGCACTAGTTGGTTCATACA+AGG + chr2.4:17927841-17927860 MS.gene065178:CDS 40.0%
! TTTCTTGGTCTTCGTCTTCT+TGG - chr2.4:17924141-17924160 None:intergenic 40.0%
! TTTGAGACCAATTATGCGCA+AGG + chr2.4:17927393-17927412 MS.gene065178:intron 40.0%
! TTTTATGAACAGTTTGCCCC+AGG + chr2.4:17928156-17928175 MS.gene065178:intron 40.0%
! TTTTTGCCAGCTTATGGAGA+AGG - chr2.4:17929080-17929099 None:intergenic 40.0%
!! AATGGGAGTAATGGTAATGG+AGG + chr2.4:17924802-17924821 MS.gene065178:CDS 40.0%
!! ATCTGCTGATTCTCGAATAC+GGG + chr2.4:17928203-17928222 MS.gene065178:CDS 40.0%
!! CAAGAGTGTTGCTAGTTCAA+TGG + chr2.4:17924870-17924889 MS.gene065178:CDS 40.0%
!! CATCTGCTGATTCTCGAATA+CGG + chr2.4:17928202-17928221 MS.gene065178:CDS 40.0%
!! CCGGTGTTACCATAACAATA+AGG - chr2.4:17926764-17926783 None:intergenic 40.0%
!! GGTAATGGAGGTTGTTCTAA+GGG + chr2.4:17924814-17924833 MS.gene065178:CDS 40.0%
!! GGTTGTTGATGGTATTGATC+TGG + chr2.4:17928224-17928243 MS.gene065178:CDS 40.0%
!! GTTGGTGTTGATGTTGTTGT+TGG - chr2.4:17924030-17924049 None:intergenic 40.0%
!! TGGGTGGAATTGTTTTCAAG+TGG + chr2.4:17925694-17925713 MS.gene065178:intron 40.0%
!! TGGTAATGGAGGTTGTTCTA+AGG + chr2.4:17924813-17924832 MS.gene065178:CDS 40.0%
!! TGTTCTAAGGGGAAGAAGAA+AGG + chr2.4:17924826-17924845 MS.gene065178:CDS 40.0%
!!! TTGTTTTCAAGTGGCTGAAC+AGG + chr2.4:17925703-17925722 MS.gene065178:intron 40.0%
AAAAATGTCAGCCTGGGGTA+TGG + chr2.4:17928905-17928924 MS.gene065178:CDS 45.0%
AACCTGAGTTGCAGTCATGT+AGG + chr2.4:17927223-17927242 MS.gene065178:intron 45.0%
ACCACGTGAAAGGGCAAAAT+CGG - chr2.4:17924290-17924309 None:intergenic 45.0%
AGAGATACTTCGTCGGAGAA+AGG + chr2.4:17924925-17924944 MS.gene065178:CDS 45.0%
AGATCACCTTCTCCATAAGC+TGG + chr2.4:17929071-17929090 MS.gene065178:CDS 45.0%
AGGGTGAGAGTGAGACAATA+TGG + chr2.4:17925009-17925028 MS.gene065178:CDS 45.0%
AGTAACAATCACCATACCCC+AGG - chr2.4:17928919-17928938 None:intergenic 45.0%
AGTACTGTTCCCGGTAATTC+TGG + chr2.4:17924421-17924440 MS.gene065178:CDS 45.0%
ATGATGTGCTTGACCTCTCT+TGG + chr2.4:17925430-17925449 MS.gene065178:CDS 45.0%
ATGGCATTGTAAGGTGGGAT+TGG - chr2.4:17924316-17924335 None:intergenic 45.0%
ATTCTGACAATTGTGGCCAC+TGG + chr2.4:17927951-17927970 MS.gene065178:intron 45.0%
CATGACTGCAACTCAGGTTT+AGG - chr2.4:17927222-17927241 None:intergenic 45.0%
CGGAATATGGCATTGTAAGG+TGG - chr2.4:17924322-17924341 None:intergenic 45.0%
CGGAGTTACGTTGTGATTCT+AGG + chr2.4:17926060-17926079 MS.gene065178:intron 45.0%
CGGATCGACAAGTTGTTGAT+TGG + chr2.4:17927682-17927701 MS.gene065178:CDS 45.0%
CTAAGGGGAAGAAGAAAGGA+GGG + chr2.4:17924830-17924849 MS.gene065178:CDS 45.0%
CTAGGCCTTTCTTGGAAAGA+CGG + chr2.4:17926078-17926097 MS.gene065178:intron 45.0%
GAAAAAAAACGGAGGGAACG+AGG - chr2.4:17927528-17927547 None:intergenic 45.0%
GAATCACAACGTAACTCCGT+TGG - chr2.4:17926059-17926078 None:intergenic 45.0%
GAGGCAACTTACACACAACA+TGG + chr2.4:17926123-17926142 MS.gene065178:intron 45.0%
GATTCATGTTTGGCAGGTTG+TGG + chr2.4:17925158-17925177 MS.gene065178:CDS 45.0%
GATTGGGTTACCACGTGAAA+GGG - chr2.4:17924299-17924318 None:intergenic 45.0%
GCACTTGCTCTCATCTTCAA+TGG + chr2.4:17927075-17927094 MS.gene065178:intron 45.0%
GCTACGGATGATAGTCAAGA+TGG + chr2.4:17924967-17924986 MS.gene065178:CDS 45.0%
GGAAAAATGAAGCCGATTGC+AGG + chr2.4:17928496-17928515 MS.gene065178:CDS 45.0%
GGGAAATATCTTGCTAGTGC+TGG + chr2.4:17925123-17925142 MS.gene065178:CDS 45.0%
GGGTGAGAGTGAGACAATAT+GGG + chr2.4:17925010-17925029 MS.gene065178:CDS 45.0%
GGTATGGTGATTGTTACTGC+TGG + chr2.4:17928921-17928940 MS.gene065178:CDS 45.0%
GGTGACACCTTTACTTCTGT+TGG - chr2.4:17928523-17928542 None:intergenic 45.0%
GTCGTTGTTGCTATCAAGCT+CGG - chr2.4:17928655-17928674 None:intergenic 45.0%
GTGAAATCCATACTGACACG+AGG - chr2.4:17928870-17928889 None:intergenic 45.0%
GTGAGTGCAAACACATGTTC+GGG - chr2.4:17925375-17925394 None:intergenic 45.0%
GTTCATTTCATGGACCTGAG+AGG + chr2.4:17924989-17925008 MS.gene065178:CDS 45.0%
GTTGAGTTTGGACCAGTTTG+TGG + chr2.4:17925347-17925366 MS.gene065178:CDS 45.0%
GTTGCTTATGGAGAAACAGG+AGG + chr2.4:17925203-17925222 MS.gene065178:CDS 45.0%
TACAGGTGTAGGAGGATGAT+TGG - chr2.4:17928691-17928710 None:intergenic 45.0%
TACTGGGAGACAGTTGACTA+TGG + chr2.4:17924678-17924697 MS.gene065178:CDS 45.0%
TATACACCTGATGGTCAGGT+TGG + chr2.4:17927738-17927757 MS.gene065178:intron 45.0%
TCCAGAAGATTATCCGCCAA+AGG - chr2.4:17925288-17925307 None:intergenic 45.0%
TCTAAGGGGAAGAAGAAAGG+AGG + chr2.4:17924829-17924848 MS.gene065178:CDS 45.0%
TCTTCTACTTTGTCGGACAC+GGG + chr2.4:17924523-17924542 MS.gene065178:CDS 45.0%
TGGATGCTAAGGTTCGCATA+TGG + chr2.4:17927652-17927671 MS.gene065178:CDS 45.0%
TGGCATTGTAAGGTGGGATT+GGG - chr2.4:17924315-17924334 None:intergenic 45.0%
TTCGTCTTCTTGGTCAGAGT+TGG - chr2.4:17924131-17924150 None:intergenic 45.0%
TTCTTGGTCAGAGTTGGAGT+TGG - chr2.4:17924125-17924144 None:intergenic 45.0%
TTCTTTGGGCAGGGGTTTAT+TGG + chr2.4:17926888-17926907 MS.gene065178:intron 45.0%
TTGTGGAGTCTGAGAGGAAA+GGG + chr2.4:17925175-17925194 MS.gene065178:CDS 45.0%
! ACACCGAAGTTTTCCTCTAC+AGG - chr2.4:17928708-17928727 None:intergenic 45.0%
! AGTGTTGCTAGTTCAATGGC+GGG + chr2.4:17924874-17924893 MS.gene065178:CDS 45.0%
! CTTCTGGAGAGGAAGAGAAA+GGG + chr2.4:17925300-17925319 MS.gene065178:CDS 45.0%
! GAAAGGGGAGTTGTTGCTTA+TGG + chr2.4:17925191-17925210 MS.gene065178:CDS 45.0%
! GAGGAATTTGAGATGACGGT+TGG + chr2.4:17924700-17924719 MS.gene065178:CDS 45.0%
! GAGTGTTGCTAGTTCAATGG+CGG + chr2.4:17924873-17924892 MS.gene065178:CDS 45.0%
! GCTGAGTGTTTTCGATGACT+TGG + chr2.4:17925507-17925526 MS.gene065178:intron 45.0%
! GGTGTTGGAAATGGGAGTAA+TGG + chr2.4:17924793-17924812 MS.gene065178:CDS 45.0%
! TCCTTTGGCGGATAATCTTC+TGG + chr2.4:17925284-17925303 MS.gene065178:CDS 45.0%
! TCTCGAATACGGGTTGTTGA+TGG + chr2.4:17928213-17928232 MS.gene065178:CDS 45.0%
! TCTTCTGGAGAGGAAGAGAA+AGG + chr2.4:17925299-17925318 MS.gene065178:CDS 45.0%
! TTCTGGAGAGGAAGAGAAAG+GGG + chr2.4:17925301-17925320 MS.gene065178:CDS 45.0%
! TTTTCCTCTACAGGTGTAGG+AGG - chr2.4:17928699-17928718 None:intergenic 45.0%
!! AAAGTGAAGGAGGTTGGTAC+TGG + chr2.4:17924661-17924680 MS.gene065178:CDS 45.0%
!! AAGTGAAGGAGGTTGGTACT+GGG + chr2.4:17924662-17924681 MS.gene065178:CDS 45.0%
!! ACGAGTACGACGTTCTGAAA+CGG - chr2.4:17924242-17924261 None:intergenic 45.0%
!! ATATCTTGCTAGTGCTGGTG+AGG + chr2.4:17925128-17925147 MS.gene065178:CDS 45.0%
!! ATTGTTACTGCTGGTCTTCG+AGG + chr2.4:17928930-17928949 MS.gene065178:CDS 45.0%
!! CGAGTTGATATCAGCTCAGA+AGG + chr2.4:17929042-17929061 MS.gene065178:CDS 45.0%
!! GCTGCTTGTTATACACCTGA+TGG + chr2.4:17927729-17927748 MS.gene065178:CDS 45.0%
!! TAGTTCAATGGCGGGTCATA+AGG + chr2.4:17924882-17924901 MS.gene065178:CDS 45.0%
!! TTCCGGTGTTGATTTCTTGC+CGG + chr2.4:17924495-17924514 MS.gene065178:CDS 45.0%
!! TTTACCATTTGCTGTGAGGG+AGG - chr2.4:17928436-17928455 None:intergenic 45.0%
AAGTGGCTGAACAGGCATCA+AGG + chr2.4:17925711-17925730 MS.gene065178:intron 50.0%
ACTGTTCCCGGTAATTCTGG+CGG + chr2.4:17924424-17924443 MS.gene065178:CDS 50.0%
ACTGTTTGTCGCACTCGCAA+TGG - chr2.4:17928778-17928797 None:intergenic 50.0%
ACTTCTGTTGGGCCTGCAAT+CGG - chr2.4:17928511-17928530 None:intergenic 50.0%
AGTGGCTGAACAGGCATCAA+GGG + chr2.4:17925712-17925731 MS.gene065178:intron 50.0%
ATACTTCGTCGGAGAAAGGC+GGG + chr2.4:17924929-17924948 MS.gene065178:CDS 50.0%
ATGTGTCAGTAGCCATTCCC+TGG + chr2.4:17928577-17928596 MS.gene065178:CDS 50.0%
CATGTTCGGGAACCACAAAC+TGG - chr2.4:17925362-17925381 None:intergenic 50.0%
CCTACTTGTTCCCACAGTAC+AGG - chr2.4:17925922-17925941 None:intergenic 50.0%
CCTCTCTTGGTCTAAGTCTC+AGG + chr2.4:17925443-17925462 MS.gene065178:CDS 50.0%
CCTGAGACTTAGACCAAGAG+AGG - chr2.4:17925446-17925465 None:intergenic 50.0%
CCTGTACTGTGGGAACAAGT+AGG + chr2.4:17925919-17925938 MS.gene065178:intron 50.0%
CGCATAAGCTCCTGCACAAT+CGG - chr2.4:17924733-17924752 None:intergenic 50.0%
CTTGAACCAACCTGACCATC+AGG - chr2.4:17927747-17927766 None:intergenic 50.0%
GAAGAATTCTTTCCGGACGG+AGG - chr2.4:17924463-17924482 None:intergenic 50.0%
GATACTTCGTCGGAGAAAGG+CGG + chr2.4:17924928-17924947 MS.gene065178:CDS 50.0%
GGAAGAAGAAAGGAGGGAGT+TGG + chr2.4:17924836-17924855 MS.gene065178:CDS 50.0%
GGATTGGGTTACCACGTGAA+AGG - chr2.4:17924300-17924319 None:intergenic 50.0%
GTTGGAACAAGAGCAGGAAG+AGG - chr2.4:17924107-17924126 None:intergenic 50.0%
GTTGGAGTTGGAACAAGAGC+AGG - chr2.4:17924113-17924132 None:intergenic 50.0%
GTTGTGGAGTCTGAGAGGAA+AGG + chr2.4:17925174-17925193 MS.gene065178:CDS 50.0%
TCAAAGCCCTCGTGTCAGTA+TGG + chr2.4:17928860-17928879 MS.gene065178:CDS 50.0%
TCATCCTCCTACACCTGTAG+AGG + chr2.4:17928692-17928711 MS.gene065178:CDS 50.0%
TGCAGGCCCAACAGAAGTAA+AGG + chr2.4:17928513-17928532 MS.gene065178:CDS 50.0%
TGGGAGACAGTTGACTATGG+AGG + chr2.4:17924681-17924700 MS.gene065178:CDS 50.0%
TGGTCAATCTCCGATTGTGC+AGG + chr2.4:17924720-17924739 MS.gene065178:CDS 50.0%
TGTGGAGTCTGAGAGGAAAG+GGG + chr2.4:17925176-17925195 MS.gene065178:CDS 50.0%
! GGTTCGCATATGGAGCATTC+CGG + chr2.4:17927662-17927681 MS.gene065178:CDS 50.0%
! TCCGATTTTGCCCTTTCACG+TGG + chr2.4:17924286-17924305 MS.gene065178:CDS 50.0%
! TGGCGGATAATCTTCTGGAG+AGG + chr2.4:17925289-17925308 MS.gene065178:CDS 50.0%
!! AGAGGAAAACTTCGGTGTCG+AGG + chr2.4:17928710-17928729 MS.gene065178:CDS 50.0%
!! CGACGTTCTGAAACGGAAGA+AGG - chr2.4:17924235-17924254 None:intergenic 50.0%
!! CTGATGGTCAGGTTGGTTCA+AGG + chr2.4:17927745-17927764 MS.gene065178:intron 50.0%
!! GAGGAAAACTTCGGTGTCGA+GGG + chr2.4:17928711-17928730 MS.gene065178:CDS 50.0%
!! TCCGGTGTTGATTTCTTGCC+GGG + chr2.4:17924496-17924515 MS.gene065178:CDS 50.0%
ACCCGTGACGTTGTCTCCTT+TGG + chr2.4:17925269-17925288 MS.gene065178:CDS 55.0%
CCCATTTCCAACACCACCAC+CGG - chr2.4:17924788-17924807 None:intergenic 55.0%
CCCCGGCAAGAAATCAACAC+CGG - chr2.4:17924500-17924519 None:intergenic 55.0%
CGCCAAAGGAGACAACGTCA+CGG - chr2.4:17925274-17925293 None:intergenic 55.0%
CGGCAGAATCATGAGGAGAC+CGG + chr2.4:17924754-17924773 MS.gene065178:CDS 55.0%
CGGTCTCCTCATGATTCTGC+CGG - chr2.4:17924756-17924775 None:intergenic 55.0%
CGTGACGTTGTCTCCTTTGG+CGG + chr2.4:17925272-17925291 MS.gene065178:CDS 55.0%
CTCGCAATGGTTGCATGGTG+TGG - chr2.4:17928765-17928784 None:intergenic 55.0%
CTGTGAGGGAGGCTGAAATC+TGG - chr2.4:17928425-17928444 None:intergenic 55.0%
GAGGGTTCACGATCTGCTTC+AGG + chr2.4:17928729-17928748 MS.gene065178:CDS 55.0%
GCCAAAGGAGACAACGTCAC+GGG - chr2.4:17925273-17925292 None:intergenic 55.0%
GCCTGGTATGGGTGATGCAT+GGG + chr2.4:17928599-17928618 MS.gene065178:CDS 55.0%
GGCCTACATGACTGCAACTC+AGG - chr2.4:17927228-17927247 None:intergenic 55.0%
TCAGCCTCCCTCACAGCAAA+TGG + chr2.4:17928429-17928448 MS.gene065178:CDS 55.0%
TCCCATGCATCACCCATACC+AGG - chr2.4:17928603-17928622 None:intergenic 55.0%
TCGCACTCGCAATGGTTGCA+TGG - chr2.4:17928770-17928789 None:intergenic 55.0%
TCTGTGCAGGGTGCACTAGT+TGG + chr2.4:17927830-17927849 MS.gene065178:intron 55.0%
TGGACAAAACAGTGCGGCTG+TGG + chr2.4:17927095-17927114 MS.gene065178:CDS 55.0%
TGGAGAGGAAGAGAAAGGGG+AGG + chr2.4:17925304-17925323 MS.gene065178:CDS 55.0%
TGTCTCACTCTCACCCTCTC+AGG - chr2.4:17925006-17925025 None:intergenic 55.0%
TTGTGCAGGAGCTTATGCGC+CGG + chr2.4:17924734-17924753 MS.gene065178:CDS 55.0%
TTTCCGGACGGAGGTTTAGC+CGG - chr2.4:17924454-17924473 None:intergenic 55.0%
! CCGGTGGTGGTGTTGGAAAT+GGG + chr2.4:17924785-17924804 MS.gene065178:CDS 55.0%
! TATGCGCCGGCAGAATCATG+AGG + chr2.4:17924747-17924766 MS.gene065178:CDS 55.0%
!! CAATGGCGGGTCATAAGGAG+AGG + chr2.4:17924887-17924906 MS.gene065178:CDS 55.0%
!! CCGGTGTTGATTTCTTGCCG+GGG + chr2.4:17924497-17924516 MS.gene065178:CDS 55.0%
ACCCATACCAGGCCAGGGAA+TGG - chr2.4:17928592-17928611 None:intergenic 60.0%
AGCCATTCCCTGGCCTGGTA+TGG + chr2.4:17928587-17928606 MS.gene065178:CDS 60.0%
AGGGGAGGTCGTCCGTTAGT+AGG + chr2.4:17925319-17925338 MS.gene065178:CDS 60.0%
CGGGGATCCGCCAGAATTAC+CGG - chr2.4:17924434-17924453 None:intergenic 60.0%
GAGGAGACCGGTGATGTAGC+CGG + chr2.4:17924766-17924785 MS.gene065178:CDS 60.0%
GCATCACCCATACCAGGCCA+GGG - chr2.4:17928597-17928616 None:intergenic 60.0%
GCCATTCCCTGGCCTGGTAT+GGG + chr2.4:17928588-17928607 MS.gene065178:CDS 60.0%
GGAGACAACGTCACGGGTTC+CGG - chr2.4:17925267-17925286 None:intergenic 60.0%
GGCAGGTTGTGGAGTCTGAG+AGG + chr2.4:17925169-17925188 MS.gene065178:CDS 60.0%
GGCCTGGTATGGGTGATGCA+TGG + chr2.4:17928598-17928617 MS.gene065178:CDS 60.0%
GGGGATCCGCCAGAATTACC+GGG - chr2.4:17924433-17924452 None:intergenic 60.0%
GGTGCTCATGCTAGTCCCAC+CGG - chr2.4:17926783-17926802 None:intergenic 60.0%
TCAGTAGCCATTCCCTGGCC+TGG + chr2.4:17928582-17928601 MS.gene065178:CDS 60.0%
TGCATCACCCATACCAGGCC+AGG - chr2.4:17928598-17928617 None:intergenic 60.0%
TTCCGGACGGAGGTTTAGCC+GGG - chr2.4:17924453-17924472 None:intergenic 60.0%
! ACCACCACCGGCTACATCAC+CGG - chr2.4:17924776-17924795 None:intergenic 60.0%
! CGGTAATTCTGGCGGATCCC+CGG + chr2.4:17924432-17924451 MS.gene065178:CDS 60.0%
! GATGTAGCCGGTGGTGGTGT+TGG + chr2.4:17924778-17924797 MS.gene065178:CDS 60.0%
! GCCGGTGGTGGTGTTGGAAA+TGG + chr2.4:17924784-17924803 MS.gene065178:CDS 60.0%
! GGGACTAGCATGAGCACCTC+TGG + chr2.4:17926785-17926804 MS.gene065178:intron 60.0%
! TGGCGGGTCATAAGGAGAGG+AGG + chr2.4:17924890-17924909 MS.gene065178:CDS 60.0%
ACCGGTGATGTAGCCGGTGG+TGG + chr2.4:17924772-17924791 MS.gene065178:CDS 65.0%
CTTCGTCGGAGAAAGGCGGG+AGG + chr2.4:17924932-17924951 MS.gene065178:CDS 65.0%
GAGACCGGTGATGTAGCCGG+TGG + chr2.4:17924769-17924788 MS.gene065178:CDS 65.0%
GAGGAGGTCGAGCTCGGCTA+CGG + chr2.4:17924951-17924970 MS.gene065178:CDS 65.0%
TCCCCGGCTAAACCTCCGTC+CGG + chr2.4:17924448-17924467 MS.gene065178:CDS 65.0%
TCCGGACGGAGGTTTAGCCG+GGG - chr2.4:17924452-17924471 None:intergenic 65.0%
AGGCGGGAGGAGGTCGAGCT+CGG + chr2.4:17924945-17924964 MS.gene065178:CDS 70.0%
CGTCGGAGAAAGGCGGGAGG+AGG + chr2.4:17924935-17924954 MS.gene065178:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 17923989 17929120 17923989 ID=MS.gene065178
chr2.4 mRNA 17923989 17929120 17923989 ID=MS.gene065178.t1;Parent=MS.gene065178
chr2.4 exon 17923989 17925464 17923989 ID=MS.gene065178.t1.exon1;Parent=MS.gene065178.t1
chr2.4 CDS 17923989 17925464 17923989 ID=cds.MS.gene065178.t1;Parent=MS.gene065178.t1
chr2.4 exon 17927076 17927166 17927076 ID=MS.gene065178.t1.exon2;Parent=MS.gene065178.t1
chr2.4 CDS 17927076 17927166 17927076 ID=cds.MS.gene065178.t1;Parent=MS.gene065178.t1
chr2.4 exon 17927598 17927755 17927598 ID=MS.gene065178.t1.exon3;Parent=MS.gene065178.t1
chr2.4 CDS 17927598 17927755 17927598 ID=cds.MS.gene065178.t1;Parent=MS.gene065178.t1
chr2.4 exon 17927839 17927890 17927839 ID=MS.gene065178.t1.exon4;Parent=MS.gene065178.t1
chr2.4 CDS 17927839 17927890 17927839 ID=cds.MS.gene065178.t1;Parent=MS.gene065178.t1
chr2.4 exon 17928003 17928085 17928003 ID=MS.gene065178.t1.exon5;Parent=MS.gene065178.t1
chr2.4 CDS 17928003 17928085 17928003 ID=cds.MS.gene065178.t1;Parent=MS.gene065178.t1
chr2.4 exon 17928168 17928261 17928168 ID=MS.gene065178.t1.exon6;Parent=MS.gene065178.t1
chr2.4 CDS 17928168 17928261 17928168 ID=cds.MS.gene065178.t1;Parent=MS.gene065178.t1
chr2.4 exon 17928403 17928951 17928403 ID=MS.gene065178.t1.exon7;Parent=MS.gene065178.t1
chr2.4 CDS 17928403 17928951 17928403 ID=cds.MS.gene065178.t1;Parent=MS.gene065178.t1
chr2.4 exon 17929035 17929120 17929035 ID=MS.gene065178.t1.exon8;Parent=MS.gene065178.t1
chr2.4 CDS 17929035 17929120 17929035 ID=cds.MS.gene065178.t1;Parent=MS.gene065178.t1
Gene Sequence

>MS.gene065178

ATGAACAAACCCATTCTCATTTCTCAAGAAGACCAACTCCAACAACAACATCAACACCAACAACTAGACCAACAAGATTTCTTCTACGAATCAAACGACCGTTTACTCTCTCTCTCCTCTTCCTGCTCTTGTTCCAACTCCAACTCTGACCAAGAAGACGAAGACCAAGAAAACAACAACAACAACAACAATAATTGTAATTACAATTTTGCCCTTAACAGTTACGACATATGGATCTCTCAACCTTCTTCCGTTTCAGAACGTCGTACTCGTCTTCTTCAAACTATTGGTCTCTCTTCCGATTTTGCCCTTTCACGTGGTAACCCAATCCCACCTTACAATGCCATATTCCGATCCAAATCTGACGGTCATAACAACAACAACAATTCTAACAACTCCTGTTTTATCTCTTCTTCTACTGTAAATGTAAATAGTACTGTTCCCGGTAATTCTGGCGGATCCCCGGCTAAACCTCCGTCCGGAAAGAATTCTTCTAGAAGAAGTCATTCCGGTGTTGATTTCTTGCCGGGGAATTCTTCTACTTTGTCGGACACGGGTGAGATAGAATGCGATGAAATTGAAAAAGGGGAAGAACAAGCTTGTACCATAAGAGATCTTGATAATGGAAAAGAATTTGTTGTGAAAGAAGTTAGAGAAGATGGAATGTGGAATAAAGTGAAGGAGGTTGGTACTGGGAGACAGTTGACTATGGAGGAATTTGAGATGACGGTTGGTCAATCTCCGATTGTGCAGGAGCTTATGCGCCGGCAGAATCATGAGGAGACCGGTGATGTAGCCGGTGGTGGTGTTGGAAATGGGAGTAATGGTAATGGAGGTTGTTCTAAGGGGAAGAAGAAAGGAGGGAGTTGGTTGAAGAGTATCAAGAGTGTTGCTAGTTCAATGGCGGGTCATAAGGAGAGGAGGAGTAGTGATGAGAGAGATACTTCGTCGGAGAAAGGCGGGAGGAGGTCGAGCTCGGCTACGGATGATAGTCAAGATGGTTCATTTCATGGACCTGAGAGGGTGAGAGTGAGACAATATGGGAAATCATGTAAAGAGTTAACTGCATTGTATAAGAGTCAAGAGATTCAAGCTCATAATGGATCAATTTGGAGTATTAAGTTTAGTTTAGATGGGAAATATCTTGCTAGTGCTGGTGAGGATTGTGTGATTCATGTTTGGCAGGTTGTGGAGTCTGAGAGGAAAGGGGAGTTGTTGCTTATGGAGAAACAGGAGGATGTTAATGTTAATATGTTATTTCTTGTTAATGGGTCGCCGGAACCCGTGACGTTGTCTCCTTTGGCGGATAATCTTCTGGAGAGGAAGAGAAAGGGGAGGTCGTCCGTTAGTAGGAAGTCGTTGAGTTTGGACCAGTTTGTGGTTCCCGAACATGTGTTTGCACTCACTGAAAAACCCGTTTGCTCCTTTAAAGGTCATTTGCATGATGTGCTTGACCTCTCTTGGTCTAAGTCTCAGGTTAGCTTCTGTTTTTTGGATAGGTCTTTTTGTTTTGGCATTGCTGAGTGTTTTCGATGACTTGGTGTCTATGTTTGTAAAATTTACTATTCACTCTTATATGGCATCGTTGGCTTTTGTTAAAAGGTTTTCTATTATTGACCGATGAACTGATGAATTGGCTTTTGTTGAACAATTTTTAGTTTTATTTTTGTGCTTATATCACAAAACTCAGTATTGATTTTATAATTGGGTGGAATTGTTTTCAAGTGGCTGAACAGGCATCAAGGGACAGATATTAGTTCCAAGTTGCATATAAGTGTACATTTAACTGTTAAAATTGGTTCCAAGTTGTATAAGAGTACATTTAAGTGTTAAAAATGTCTTGTACTAGTTATTAGTTATTAGAGTACATACAGGACTATTGCTAGTTTTAGTGACTCTCCTTTCGGTTGCATTATTGCAGTCTTAAAAACCTGTACTGTGGGAACAAGTAGGAAAAGTTGTCACAGTGAAAAGATTTCTGGATCTTTTTTCTTCTCTCCTACTCAATCAGACTCAAATTTGTGTTTATAAACTTCGTTTTTAATGGGTCTAAAATGGTTTATTTTTCCAACGGAGTTACGTTGTGATTCTAGGCCTTTCTTGGAAAGACGGCATTTAAAATGAACAATTTAGGGAGGCAACTTACACACAACATGGTAGCAGTGCGTTTAGAGATTTCTTTATGTTTGATATTTTCTTTGACAAGGAAACATGGTTGAGTATATCTTAATTTTTTACTGCAATTGCTTTAGTGAACTGTGATGTGGAGAAATTAAGATGTCTGTTGAATAAAGCGGTAACTTACTTAGGATGGTTATTTGTAACTTGGGGTGGGGAGTTGCTAAATGCTAAACTAGACAATATGTTGATGTCTTTACAATGGAAGAGTAAATTTATATTGTTTTAAAATTAACTTCTGATTAAGTAGGCTGTAATCCATCCTTTTACCACAAAACTAAAATTGTATTTATTTCCCCAGCTCAACAAATGTGTTTGAAATTTTAATGACTTGCTCACTTACCAAATTATTTTTGTTGTTAAACCACTTTACATTCAATGTTACGACAGACAAAAGTTATTTGTAATTGGTTCTAGTTTATATTGTTTTATGAAACCATATTTAACATAAAAGGTTTGGATCCTATTAAAGAGGGGAAAAAACCTTTGAAAGTTTTGAACTGATTTGTTTAGTTTGCCAAACTTCCCCCTTTAGTTTACATTGGAGAGGATGTTTATGTAAACTAGGCATTGCAACATCCTATTTGATTCATACCTTATTGTTATGGTAACACCGGTGGGACTAGCATGAGCACCTCTGGTAGTTATTAAAATTTGAAGAATGAATTATGATGATTGATAGCATAGCTAGCTGAGACAATTTCTTTGAATTTTGAATAGATTCTTTGGGCAGGGGTTTATTGGTTTATTTATTTAGATACTTTTTTTTTTCTTTCTATTAATGTCTGTTGAATAATATTTAAAATTGAAATATTTTTCATAAATCAGTTCTTTTTGTTCTTGAAATACTAATTAAAATACCAGTGTTTAGATCATCCTTGTAATGTTTATACTTCGCATTTTGCACAGCACTTGCTCTCATCTTCAATGGACAAAACAGTGCGGCTGTGGCATTTGTCTAGCAAGTCTTGTTTGAAGATTTTTTCACACAGTGACTATGGTGAGTAAATGTAATCATTCTATCATCTTGCAATAAACTTATCTTCAGACTCCCTAAACCTGAGTTGCAGTCATGTAGGCCACTCTAATGTGCATGTATATATAACAGAGCACCCGTGTACTTTTTATGTGTTTTTATCGAAGTTTCTGCTGCCTCTTCCCTATTAAAAATTGAATTAGATTTGAAGTCTGTCCTATCCCTATCCAATCTGATTCAAGATATAGTTTTTGAGACCAATTATGCGCAAGGCACAATTTTATCATAATATTTGTCTTCACTGCATATAGGACAAGTTATACAGGAGTTCTTTAATATCCTATAGGGTGGTTGAAATTTAGGAGTTAACGCAATTTAATACCCTCGTTCCCTCCGTTTTTTTTCTTTGCTAATTATACCTTTTTTTGTTTCTATCTGCTTTCTGTCTGGCACAGTAACTTGCATCCAGTTTAATCCTGTTGATGATAGATACTTCATTAGTGGATCTTTGGATGCTAAGGTTCGCATATGGAGCATTCCGGATCGACAAGTTGTTGATTGGATCGATCTTCATGAGATGGTCACTGCTGCTTGTTATACACCTGATGGTCAGGTTGGTTCAAGGTTAATATGCATCCATTTCAGACTTCAGAAATTCAACAGTTAACTTACAACTTAGTTAAATTGTCTGTGCAGGGTGCACTAGTTGGTTCATACAAGGGTAGCTGTCATTTATATAATACATCTGGTACTGTCAGAGGCTTTTTCTTTTCTTTATATAATAATTGTGTCTATTTATCTATACTCTATTCTGACAATTGTGGCCACTGGTTAACATCTTGTTTTTATATTCTGTTCAGAAAATAAGTTGCAACAGAAAAGTCAGATCAATCTGCAGAACAAGAAAAAGAAATCAAATCACAAGAAAATTACTGGTTTCCAGGTAATTTAATGATTTACTGGCTTACAGCTGTACCAAAGTTATGATGCTTATGATTGTCTTTGTATTTGCATTTTATGAACAGTTTGCCCCAGGAAGTTCATCAGAAGTACTTATCACATCTGCTGATTCTCGAATACGGGTTGTTGATGGTATTGATCTGGTTCATAAGTTTAAAGGTGTGTAACACGAGCAAACAACAAGTAAAATTTATTTAAAAGATCATATAACAAGTGAATTGACCATTTGTATGATAAATTGTATTTAATTATATGCTCAAACCAATTCGTGCTGATCAAACTGATGTAAGTTTCTTGCAGGCTTTCGAAATGCAAGTAGCCAGATTTCAGCCTCCCTCACAGCAAATGGTAAATATATTGTTGCTGCAAGTGAGGATTCCCATGTATACATCTGGAAAAATGAAGCCGATTGCAGGCCCAACAGAAGTAAAGGTGTCACCGTGACACAGTCCTATGAACATTTTCACTGTAAAGATGTGTCAGTAGCCATTCCCTGGCCTGGTATGGGTGATGCATGGGACATGCATGATACATTTTCTGGAGCACAAACCGAGCTTGATAGCAACAACGACGAAATCGCATCAGCCAATCATCCTCCTACACCTGTAGAGGAAAACTTCGGTGTCGAGGGTTCACGATCTGCTTCAGGTTATAATAGTCCACACCATGCAACCATTGCGAGTGCGACAAACAGTTACTTCTTCGATAGAATTTCTGCAACATGGCCGGAAGAAAAACTTCTTCTAGCTGCAAGAAATCAAAGCCCTCGTGTCAGTATGGATTTCACAAATGGGGTAAGTCAAAAAATGTCAGCCTGGGGTATGGTGATTGTTACTGCTGGTCTTCGAGGTGAGATTAGAACTTTCCAAAATTTTGGATTGCCACTTCGAATATAAGAGACCATAGAATATGTGTATGACTATATGTCACAGCGGAGAGCGAGTTGATATCAGCTCAGAAGGCAGTTGAGATCACCTTCTCCATAAGCTGGCAAAAACCTGTACAGAAAAGTGAGTGA
Protein sequence

>MS.gene065178.t1

MNKPILISQEDQLQQQHQHQQLDQQDFFYESNDRLLSLSSSCSCSNSNSDQEDEDQENNNNNNNNCNYNFALNSYDIWISQPSSVSERRTRLLQTIGLSSDFALSRGNPIPPYNAIFRSKSDGHNNNNNSNNSCFISSSTVNVNSTVPGNSGGSPAKPPSGKNSSRRSHSGVDFLPGNSSTLSDTGEIECDEIEKGEEQACTIRDLDNGKEFVVKEVREDGMWNKVKEVGTGRQLTMEEFEMTVGQSPIVQELMRRQNHEETGDVAGGGVGNGSNGNGGCSKGKKKGGSWLKSIKSVASSMAGHKERRSSDERDTSSEKGGRRSSSATDDSQDGSFHGPERVRVRQYGKSCKELTALYKSQEIQAHNGSIWSIKFSLDGKYLASAGEDCVIHVWQVVESERKGELLLMEKQEDVNVNMLFLVNGSPEPVTLSPLADNLLERKRKGRSSVSRKSLSLDQFVVPEHVFALTEKPVCSFKGHLHDVLDLSWSKSQHLLSSSMDKTVRLWHLSSKSCLKIFSHSDYVTCIQFNPVDDRYFISGSLDAKVRIWSIPDRQVVDWIDLHEMVTAACYTPDGQGALVGSYKGSCHLYNTSENKLQQKSQINLQNKKKKSNHKKITGFQFAPGSSSEVLITSADSRIRVVDGIDLVHKFKGFRNASSQISASLTANGKYIVAASEDSHVYIWKNEADCRPNRSKGVTVTQSYEHFHCKDVSVAIPWPGMGDAWDMHDTFSGAQTELDSNNDEIASANHPPTPVEENFGVEGSRSASGYNSPHHATIASATNSYFFDRISATWPEEKLLLAARNQSPRVSMDFTNGVSQKMSAWGMVIVTAGLRAESELISAQKAVEITFSISWQKPVQKSE