Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065180.t1 | XP_013464732.1 | 97.1 | 245 | 7 | 0 | 1 | 245 | 9 | 253 | 5.80E-139 | 503.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065180.t1 | P24805 | 41.1 | 141 | 82 | 1 | 1 | 141 | 9 | 148 | 1.4e-24 | 114.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065180.t1 | B7FHV5 | 97.1 | 245 | 7 | 0 | 1 | 245 | 9 | 253 | 4.2e-139 | 503.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053401 | MS.gene065180 | 0.818487 | 1.91E-52 | -1.69E-46 |
| MS.gene059856 | MS.gene065180 | 0.947711 | 3.95E-106 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 59 sgRNAs with CRISPR-Local
Find 110 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCTTTGATGAAGAGAAAA+AGG | 0.230736 | 2.4:+17944648 | None:intergenic |
| TGTTTCTGATTGAAGCTTAT+AGG | 0.236090 | 2.4:-17944086 | MS.gene065180:CDS |
| ACAACTTGATCTGGTGGATA+TGG | 0.300897 | 2.4:+17944045 | None:intergenic |
| TGACATATACTGCTTATTCT+TGG | 0.304694 | 2.4:-17944175 | MS.gene065180:CDS |
| TCCTTACTGAACAAGCAATA+TGG | 0.322158 | 2.4:-17944135 | MS.gene065180:CDS |
| GACATATACTGCTTATTCTT+GGG | 0.337382 | 2.4:-17944174 | MS.gene065180:CDS |
| GCAGGGCTATTCAGCTCTTC+AGG | 0.347531 | 2.4:+17944801 | None:intergenic |
| TGGTGGATTGAAGTTGTATT+GGG | 0.352740 | 2.4:-17943854 | MS.gene065180:CDS |
| TTCATAGAACAAGTATTATC+AGG | 0.367478 | 2.4:+17944711 | None:intergenic |
| GATGTGTGGGGCCAACTTTA+AGG | 0.380784 | 2.4:-17943265 | MS.gene065180:CDS |
| TTTAAGCCTTTGTATGATGC+AGG | 0.380881 | 2.4:+17944783 | None:intergenic |
| AATACTTGTTCTATGAACTT+TGG | 0.381957 | 2.4:-17944705 | MS.gene065180:CDS |
| AACCCTCTTGTACAACATTA+AGG | 0.386014 | 2.4:+17943794 | None:intergenic |
| GTTGTTTATGACAGCACATA+TGG | 0.386283 | 2.4:-17943994 | MS.gene065180:CDS |
| TTGCTCCCATTCCATCCAAT+TGG | 0.404613 | 2.4:+17943194 | None:intergenic |
| ATGGTGGATTGAAGTTGTAT+TGG | 0.415848 | 2.4:-17943855 | MS.gene065180:CDS |
| CAAGTTGTTAAGGAACTTGA+TGG | 0.416575 | 2.4:-17944030 | MS.gene065180:CDS |
| TATTGGGGTATTGCCGCTGA+TGG | 0.425828 | 2.4:-17943838 | MS.gene065180:CDS |
| TCCACCAGATCAAGTTGTTA+AGG | 0.433324 | 2.4:-17944040 | MS.gene065180:CDS |
| AGTTCCTTAACAACTTGATC+TGG | 0.448722 | 2.4:+17944036 | None:intergenic |
| AGAATTTCTTCAGAAAGCTT+AGG | 0.450941 | 2.4:+17944756 | None:intergenic |
| ACCATATTGCTTGTTCAGTA+AGG | 0.461779 | 2.4:+17944134 | None:intergenic |
| GAACTTATCAACCTTAAAGT+TGG | 0.462511 | 2.4:+17943254 | None:intergenic |
| GTGAATCCAATTGGATGGAA+TGG | 0.469235 | 2.4:-17943200 | MS.gene065180:CDS |
| CAAGCAATATGGTTTGTCAA+AGG | 0.499784 | 2.4:-17944124 | MS.gene065180:CDS |
| ACTCCTTCACTGTCTATCCT+TGG | 0.503821 | 2.4:+17943288 | None:intergenic |
| CAATTGATACCTGCTGGAAA+AGG | 0.504528 | 2.4:+17943754 | None:intergenic |
| AAGCAATATGGTTTGTCAAA+GGG | 0.505741 | 2.4:-17944123 | MS.gene065180:CDS |
| TGAATCCAATTGGATGGAAT+GGG | 0.508806 | 2.4:-17943199 | MS.gene065180:CDS |
| TTTATGCAGGGTTCTGATGG+TGG | 0.519132 | 2.4:-17943871 | MS.gene065180:intron |
| GCATCCACTGAACAAGTTGA+AGG | 0.521756 | 2.4:-17943316 | MS.gene065180:CDS |
| TCCTTAACAACTTGATCTGG+TGG | 0.527113 | 2.4:+17944039 | None:intergenic |
| TTAAGCCTTTGTATGATGCA+GGG | 0.539695 | 2.4:+17944784 | None:intergenic |
| TGTATGTTTCATAGTGAAGG+AGG | 0.544867 | 2.4:-17943354 | MS.gene065180:CDS |
| GAGTTGGTAGTGAATCCAAT+TGG | 0.553165 | 2.4:-17943209 | MS.gene065180:CDS |
| ACATATACTGCTTATTCTTG+GGG | 0.555358 | 2.4:-17944173 | MS.gene065180:CDS |
| TGGTAGTGAATCCAATTGGA+TGG | 0.564629 | 2.4:-17943205 | MS.gene065180:CDS |
| ATTGGGGTATTGCCGCTGAT+GGG | 0.568391 | 2.4:-17943837 | MS.gene065180:CDS |
| GTCAACAGTATTCCTCGAGT+TGG | 0.573016 | 2.4:-17943225 | MS.gene065180:CDS |
| GGGTGTATGTTTCATAGTGA+AGG | 0.585970 | 2.4:-17943357 | MS.gene065180:CDS |
| GTGGATATGGACCACGGTCA+CGG | 0.586213 | 2.4:+17944058 | None:intergenic |
| GGGCTATTCAGCTCTTCAGG+TGG | 0.589074 | 2.4:+17944804 | None:intergenic |
| ACCTGCTGGAAAAGGAGCAA+AGG | 0.590844 | 2.4:+17943762 | None:intergenic |
| TGACCTTAATGTTGTACAAG+AGG | 0.595852 | 2.4:-17943797 | MS.gene065180:CDS |
| ATTGCCTTCAACTTGTTCAG+TGG | 0.600704 | 2.4:+17943312 | None:intergenic |
| GGTGGATTGAAGTTGTATTG+GGG | 0.606006 | 2.4:-17943853 | MS.gene065180:CDS |
| GACAGTGAAGGAGTGATGTG+TGG | 0.622107 | 2.4:-17943279 | MS.gene065180:CDS |
| ACAGTGAAGGAGTGATGTGT+GGG | 0.629204 | 2.4:-17943278 | MS.gene065180:CDS |
| AATAGCCCTGCATCATACAA+AGG | 0.630008 | 2.4:-17944789 | MS.gene065180:CDS |
| ATAAGCTTCAATCAGAAACA+TGG | 0.642892 | 2.4:+17944089 | None:intergenic |
| ACAAGTTGAAGGCAATGCCA+AGG | 0.645708 | 2.4:-17943305 | MS.gene065180:CDS |
| TGTGCTGTCATAAACAACAA+AGG | 0.658420 | 2.4:+17943999 | None:intergenic |
| TATAGGACACTCCGTGACCG+TGG | 0.676131 | 2.4:-17944069 | MS.gene065180:CDS |
| ATGCCAAGGATAGACAGTGA+AGG | 0.681425 | 2.4:-17943291 | MS.gene065180:CDS |
| GACCTTAATGTTGTACAAGA+GGG | 0.690369 | 2.4:-17943796 | MS.gene065180:CDS |
| TTGGATTCACTACCAACTCG+AGG | 0.697059 | 2.4:+17943213 | None:intergenic |
| GATCACAACAGACCCATCAG+CGG | 0.715155 | 2.4:+17943825 | None:intergenic |
| GATCTGGTGGATATGGACCA+CGG | 0.727078 | 2.4:+17944052 | None:intergenic |
| CAGTGAAGGAGTGATGTGTG+GGG | 0.800044 | 2.4:-17943277 | MS.gene065180:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTTTAACTCTAAATA+CGG | + | chr2.4:17944476-17944495 | None:intergenic | 10.0% |
| !!! | ATCAATTTTTCCAATAAAAA+AGG | + | chr2.4:17943665-17943684 | None:intergenic | 15.0% |
| !!! | ATTTTGTTTTCAAGATAAAT+GGG | + | chr2.4:17944292-17944311 | None:intergenic | 15.0% |
| !! | AAAACAAAATCTCTTCAAAT+TGG | - | chr2.4:17944302-17944321 | MS.gene065180:intron | 20.0% |
| !! | TCCAACATAAAAGTTTAATA+TGG | - | chr2.4:17943576-17943595 | MS.gene065180:intron | 20.0% |
| !! | TTTGTTAGATCAATATGATA+CGG | - | chr2.4:17944435-17944454 | MS.gene065180:intron | 20.0% |
| !!! | ACCATATTAAACTTTTATGT+TGG | + | chr2.4:17943580-17943599 | None:intergenic | 20.0% |
| !!! | CATCTTTAATTCCTTTTATA+AGG | - | chr2.4:17943543-17943562 | MS.gene065180:intron | 20.0% |
| !!! | GATTTTGTTTTCAAGATAAA+TGG | + | chr2.4:17944293-17944312 | None:intergenic | 20.0% |
| !!! | TTTTAAAATCATTGAATGCA+GGG | - | chr2.4:17944626-17944645 | MS.gene065180:intron | 20.0% |
| !!! | TTTTAGTACACCTTTTTTTA+TGG | - | chr2.4:17943414-17943433 | MS.gene065180:intron | 20.0% |
| !!! | TTTTTAAAATCATTGAATGC+AGG | - | chr2.4:17944625-17944644 | MS.gene065180:intron | 20.0% |
| ! | AATACTTGTTCTATGAACTT+TGG | - | chr2.4:17943298-17943317 | MS.gene065180:CDS | 25.0% |
| ! | AGAATTGTTAACAAAGAACA+TGG | + | chr2.4:17944077-17944096 | None:intergenic | 25.0% |
| ! | ATTACATCATAACCAATATG+TGG | - | chr2.4:17944329-17944348 | MS.gene065180:intron | 25.0% |
| ! | TTCATAGAACAAGTATTATC+AGG | + | chr2.4:17943295-17943314 | None:intergenic | 25.0% |
| ! | TTTGTAGCAACCATAAAAAA+AGG | + | chr2.4:17943427-17943446 | None:intergenic | 25.0% |
| !! | TCCTTTTATAAGGATGAATT+CGG | - | chr2.4:17943553-17943572 | MS.gene065180:intron | 25.0% |
| !!! | ATGATGTTTGTTTTTTATGC+AGG | - | chr2.4:17944119-17944138 | MS.gene065180:CDS | 25.0% |
| !!! | TGATGTTTGTTTTTTATGCA+GGG | - | chr2.4:17944120-17944139 | MS.gene065180:CDS | 25.0% |
| AACCTTTGATGAAGAGAAAA+AGG | + | chr2.4:17943358-17943377 | None:intergenic | 30.0% | |
| ACACTTCAAACAAATTGCAA+AGG | - | chr2.4:17944591-17944610 | MS.gene065180:intron | 30.0% | |
| ACATATACTGCTTATTCTTG+GGG | - | chr2.4:17943830-17943849 | MS.gene065180:CDS | 30.0% | |
| ACCGAATTCATCCTTATAAA+AGG | + | chr2.4:17943557-17943576 | None:intergenic | 30.0% | |
| AGAATTTCTTCAGAAAGCTT+AGG | + | chr2.4:17943250-17943269 | None:intergenic | 30.0% | |
| ATAAGCTTCAATCAGAAACA+TGG | + | chr2.4:17943917-17943936 | None:intergenic | 30.0% | |
| ATTGATGTTACTGACCAAAT+TGG | - | chr2.4:17943679-17943698 | MS.gene065180:intron | 30.0% | |
| CAAAGACGTGTATTATGTTA+CGG | - | chr2.4:17943620-17943639 | MS.gene065180:intron | 30.0% | |
| GAACTTATCAACCTTAAAGT+TGG | + | chr2.4:17944752-17944771 | None:intergenic | 30.0% | |
| GACATATACTGCTTATTCTT+GGG | - | chr2.4:17943829-17943848 | MS.gene065180:CDS | 30.0% | |
| TAGATCAATATGATACGGTT+TGG | - | chr2.4:17944440-17944459 | MS.gene065180:intron | 30.0% | |
| TGACATATACTGCTTATTCT+TGG | - | chr2.4:17943828-17943847 | MS.gene065180:CDS | 30.0% | |
| TTTAATATGGTATCAGAGTC+TGG | - | chr2.4:17943589-17943608 | MS.gene065180:intron | 30.0% | |
| ! | AAGCAATATGGTTTGTCAAA+GGG | - | chr2.4:17943880-17943899 | MS.gene065180:intron | 30.0% |
| ! | CTAAGAGATGAAATTTTTGC+AGG | - | chr2.4:17943788-17943807 | MS.gene065180:CDS | 30.0% |
| ! | TGTTTCTGATTGAAGCTTAT+AGG | - | chr2.4:17943917-17943936 | MS.gene065180:intron | 30.0% |
| ! | TTTTGTAGCAACCATGTTAT+TGG | + | chr2.4:17943737-17943756 | None:intergenic | 30.0% |
| !! | AATTTTTGCAGGTTGTTTTG+TGG | - | chr2.4:17943799-17943818 | MS.gene065180:CDS | 30.0% |
| !! | ATTTTTGCAGGTTGTTTTGT+GGG | - | chr2.4:17943800-17943819 | MS.gene065180:CDS | 30.0% |
| !!! | CAGTTGCATACCTTTTTTAT+TGG | - | chr2.4:17943652-17943671 | MS.gene065180:intron | 30.0% |
| AACCCTCTTGTACAACATTA+AGG | + | chr2.4:17944212-17944231 | None:intergenic | 35.0% | |
| AAGTGTCTGAGTCTCTAATT+TGG | + | chr2.4:17944577-17944596 | None:intergenic | 35.0% | |
| AATGATTGTTGGATCGAGAT+CGG | + | chr2.4:17944517-17944536 | None:intergenic | 35.0% | |
| ACCATATTGCTTGTTCAGTA+AGG | + | chr2.4:17943872-17943891 | None:intergenic | 35.0% | |
| AGTTCCTTAACAACTTGATC+TGG | + | chr2.4:17943970-17943989 | None:intergenic | 35.0% | |
| CAAAGAATCGCAATCATATG+TGG | - | chr2.4:17943495-17943514 | MS.gene065180:intron | 35.0% | |
| CAAGTTGTTAAGGAACTTGA+TGG | - | chr2.4:17943973-17943992 | MS.gene065180:intron | 35.0% | |
| CATCATAACCAATATGTGGT+TGG | - | chr2.4:17944333-17944352 | MS.gene065180:intron | 35.0% | |
| CGTAACATAATACACGTCTT+TGG | + | chr2.4:17943622-17943641 | None:intergenic | 35.0% | |
| GACCTTAATGTTGTACAAGA+GGG | - | chr2.4:17944207-17944226 | MS.gene065180:intron | 35.0% | |
| GCTAACACATCAATGATTGT+TGG | + | chr2.4:17944528-17944547 | None:intergenic | 35.0% | |
| GTTGTTTATGACAGCACATA+TGG | - | chr2.4:17944009-17944028 | MS.gene065180:CDS | 35.0% | |
| TCCTTACTGAACAAGCAATA+TGG | - | chr2.4:17943868-17943887 | MS.gene065180:intron | 35.0% | |
| TGAAGAGAAAAAGGCTTATC+AGG | + | chr2.4:17943349-17943368 | None:intergenic | 35.0% | |
| TGAATCCAATTGGATGGAAT+GGG | - | chr2.4:17944804-17944823 | MS.gene065180:CDS | 35.0% | |
| TGACCTTAATGTTGTACAAG+AGG | - | chr2.4:17944206-17944225 | MS.gene065180:intron | 35.0% | |
| TGTATGTTTCATAGTGAAGG+AGG | - | chr2.4:17944649-17944668 | MS.gene065180:intron | 35.0% | |
| TGTGCTGTCATAAACAACAA+AGG | + | chr2.4:17944007-17944026 | None:intergenic | 35.0% | |
| TTAAGCCTTTGTATGATGCA+GGG | + | chr2.4:17943222-17943241 | None:intergenic | 35.0% | |
| TTTAAGCCTTTGTATGATGC+AGG | + | chr2.4:17943223-17943242 | None:intergenic | 35.0% | |
| ! | AGCCTTTTTCTCTTCATCAA+AGG | - | chr2.4:17943353-17943372 | MS.gene065180:CDS | 35.0% |
| ! | CAAGCAATATGGTTTGTCAA+AGG | - | chr2.4:17943879-17943898 | MS.gene065180:intron | 35.0% |
| !! | ATGGTGGATTGAAGTTGTAT+TGG | - | chr2.4:17944148-17944167 | MS.gene065180:CDS | 35.0% |
| !! | TGGTGGATTGAAGTTGTATT+GGG | - | chr2.4:17944149-17944168 | MS.gene065180:CDS | 35.0% |
| !!! | TTTTTTATGCAGGGTTCTGA+TGG | - | chr2.4:17944129-17944148 | MS.gene065180:CDS | 35.0% |
| AATAGCCCTGCATCATACAA+AGG | - | chr2.4:17943214-17943233 | MS.gene065180:CDS | 40.0% | |
| ATTTGCTTGCGCCAATAACA+TGG | - | chr2.4:17943723-17943742 | MS.gene065180:intron | 40.0% | |
| CAATTGATACCTGCTGGAAA+AGG | + | chr2.4:17944252-17944271 | None:intergenic | 40.0% | |
| GATGTTACTGACCAAATTGG+CGG | - | chr2.4:17943682-17943701 | MS.gene065180:intron | 40.0% | |
| GCTAAACAATTGATACCTGC+TGG | + | chr2.4:17944258-17944277 | None:intergenic | 40.0% | |
| GGGTGTATGTTTCATAGTGA+AGG | - | chr2.4:17944646-17944665 | MS.gene065180:intron | 40.0% | |
| GTGAATCCAATTGGATGGAA+TGG | - | chr2.4:17944803-17944822 | MS.gene065180:CDS | 40.0% | |
| TCCTTAACAACTTGATCTGG+TGG | + | chr2.4:17943967-17943986 | None:intergenic | 40.0% | |
| TGCATGCAATCTAAATCCCT+TGG | + | chr2.4:17944375-17944394 | None:intergenic | 40.0% | |
| ! | ACAACTTGATCTGGTGGATA+TGG | + | chr2.4:17943961-17943980 | None:intergenic | 40.0% |
| ! | ATTGCCTTCAACTTGTTCAG+TGG | + | chr2.4:17944694-17944713 | None:intergenic | 40.0% |
| ! | TCCACCAGATCAAGTTGTTA+AGG | - | chr2.4:17943963-17943982 | MS.gene065180:intron | 40.0% |
| ! | TGGTAGTGAATCCAATTGGA+TGG | - | chr2.4:17944798-17944817 | MS.gene065180:CDS | 40.0% |
| !! | GAGTTGGTAGTGAATCCAAT+TGG | - | chr2.4:17944794-17944813 | MS.gene065180:CDS | 40.0% |
| !! | GGTGGATTGAAGTTGTATTG+GGG | - | chr2.4:17944150-17944169 | MS.gene065180:CDS | 40.0% |
| !!! | TGGAATTGTTTTTGCTGCAC+TGG | - | chr2.4:17944029-17944048 | MS.gene065180:CDS | 40.0% |
| ACAGTGAAGGAGTGATGTGT+GGG | - | chr2.4:17944725-17944744 | MS.gene065180:CDS | 45.0% | |
| ACTCCTTCACTGTCTATCCT+TGG | + | chr2.4:17944718-17944737 | None:intergenic | 45.0% | |
| ATGCCAAGGATAGACAGTGA+AGG | - | chr2.4:17944712-17944731 | MS.gene065180:CDS | 45.0% | |
| GATGGAATGGGAGCAACATT+AGG | - | chr2.4:17944816-17944835 | MS.gene065180:CDS | 45.0% | |
| GTCAACAGTATTCCTCGAGT+TGG | - | chr2.4:17944778-17944797 | MS.gene065180:CDS | 45.0% | |
| TTGCTCCCATTCCATCCAAT+TGG | + | chr2.4:17944812-17944831 | None:intergenic | 45.0% | |
| TTGGATTCACTACCAACTCG+AGG | + | chr2.4:17944793-17944812 | None:intergenic | 45.0% | |
| ! | ACAAGTTGAAGGCAATGCCA+AGG | - | chr2.4:17944698-17944717 | MS.gene065180:CDS | 45.0% |
| ! | GCATCCACTGAACAAGTTGA+AGG | - | chr2.4:17944687-17944706 | MS.gene065180:CDS | 45.0% |
| ! | TTTATGCAGGGTTCTGATGG+TGG | - | chr2.4:17944132-17944151 | MS.gene065180:CDS | 45.0% |
| !! | AGTACTGATCTCCGCCAATT+TGG | + | chr2.4:17943696-17943715 | None:intergenic | 45.0% |
| ACCTGCTGGAAAAGGAGCAA+AGG | + | chr2.4:17944244-17944263 | None:intergenic | 50.0% | |
| CACTCGGACCAACCACATAT+TGG | + | chr2.4:17944344-17944363 | None:intergenic | 50.0% | |
| CAGTGAAGGAGTGATGTGTG+GGG | - | chr2.4:17944726-17944745 | MS.gene065180:CDS | 50.0% | |
| GACAGTGAAGGAGTGATGTG+TGG | - | chr2.4:17944724-17944743 | MS.gene065180:CDS | 50.0% | |
| GATCACAACAGACCCATCAG+CGG | + | chr2.4:17944181-17944200 | None:intergenic | 50.0% | |
| GATGTGTGGGGCCAACTTTA+AGG | - | chr2.4:17944738-17944757 | MS.gene065180:CDS | 50.0% | |
| TCCGAGTGGTAAGACACCAA+GGG | - | chr2.4:17944356-17944375 | MS.gene065180:intron | 50.0% | |
| ! | CAATATGTGGTTGGTCCGAG+TGG | - | chr2.4:17944342-17944361 | MS.gene065180:intron | 50.0% |
| ! | GATCTGGTGGATATGGACCA+CGG | + | chr2.4:17943954-17943973 | None:intergenic | 50.0% |
| ! | TCCTTTGCTCCTTTTCCAGC+AGG | - | chr2.4:17944240-17944259 | MS.gene065180:intron | 50.0% |
| !! | ATTGGGGTATTGCCGCTGAT+GGG | - | chr2.4:17944166-17944185 | MS.gene065180:CDS | 50.0% |
| !! | TATTGGGGTATTGCCGCTGA+TGG | - | chr2.4:17944165-17944184 | MS.gene065180:CDS | 50.0% |
| !! | TCCCTTGGTGTCTTACCACT+CGG | + | chr2.4:17944360-17944379 | None:intergenic | 50.0% |
| GCAGGGCTATTCAGCTCTTC+AGG | + | chr2.4:17943205-17943224 | None:intergenic | 55.0% | |
| GGGCTATTCAGCTCTTCAGG+TGG | + | chr2.4:17943202-17943221 | None:intergenic | 55.0% | |
| GTCCGAGTGGTAAGACACCA+AGG | - | chr2.4:17944355-17944374 | MS.gene065180:intron | 55.0% | |
| GTGGATATGGACCACGGTCA+CGG | + | chr2.4:17943948-17943967 | None:intergenic | 55.0% | |
| TATAGGACACTCCGTGACCG+TGG | - | chr2.4:17943934-17943953 | MS.gene065180:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 17943188 | 17944837 | 17943188 | ID=MS.gene065180 |
| chr2.4 | mRNA | 17943188 | 17944837 | 17943188 | ID=MS.gene065180.t1;Parent=MS.gene065180 |
| chr2.4 | exon | 17944651 | 17944837 | 17944651 | ID=MS.gene065180.t1.exon1;Parent=MS.gene065180.t1 |
| chr2.4 | CDS | 17944651 | 17944837 | 17944651 | ID=cds.MS.gene065180.t1;Parent=MS.gene065180.t1 |
| chr2.4 | exon | 17943975 | 17944215 | 17943975 | ID=MS.gene065180.t1.exon2;Parent=MS.gene065180.t1 |
| chr2.4 | CDS | 17943975 | 17944215 | 17943975 | ID=cds.MS.gene065180.t1;Parent=MS.gene065180.t1 |
| chr2.4 | exon | 17943764 | 17943884 | 17943764 | ID=MS.gene065180.t1.exon3;Parent=MS.gene065180.t1 |
| chr2.4 | CDS | 17943764 | 17943884 | 17943764 | ID=cds.MS.gene065180.t1;Parent=MS.gene065180.t1 |
| chr2.4 | exon | 17943188 | 17943378 | 17943188 | ID=MS.gene065180.t1.exon4;Parent=MS.gene065180.t1 |
| chr2.4 | CDS | 17943188 | 17943378 | 17943188 | ID=cds.MS.gene065180.t1;Parent=MS.gene065180.t1 |
| Gene Sequence |
| Protein sequence |
