Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065207.t1 | XP_013446111.1 | 87.3 | 771 | 93 | 2 | 1 | 771 | 1 | 766 | 1.30E-229 | 806.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065207.t1 | P0CB23 | 32.5 | 836 | 395 | 7 | 1 | 669 | 1 | 834 | 2.4e-46 | 188.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065207.t1 | A0A072TTF3 | 87.3 | 771 | 93 | 2 | 1 | 771 | 1 | 766 | 9.4e-230 | 806.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059300 | MS.gene065207 | 0.830993 | 2.15E-55 | -1.69E-46 |
| MS.gene06057 | MS.gene065207 | 0.817805 | 2.73E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065207.t1 | MTR_8g471150 | 91.051 | 771 | 64 | 2 | 1 | 771 | 1 | 766 | 0.0 | 1370 |
| MS.gene065207.t1 | MTR_2g009620 | 32.751 | 687 | 385 | 9 | 5 | 668 | 6 | 638 | 3.06e-84 | 287 |
| MS.gene065207.t1 | MTR_5g032080 | 51.695 | 236 | 98 | 3 | 206 | 441 | 95 | 314 | 2.10e-56 | 206 |
| MS.gene065207.t1 | MTR_5g032080 | 50.877 | 114 | 53 | 2 | 1 | 114 | 1 | 111 | 1.12e-17 | 88.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065207.t1 | AT4G38062 | 45.965 | 570 | 292 | 5 | 1 | 569 | 1 | 555 | 2.80e-125 | 400 |
| MS.gene065207.t1 | AT4G38062 | 43.925 | 214 | 76 | 2 | 481 | 666 | 634 | 831 | 9.61e-32 | 133 |
Find 109 sgRNAs with CRISPR-Local
Find 121 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGTTCTTTGTTGCATTCTT+TGG | 0.131287 | 8.1:+36320807 | None:intergenic |
| ATCTCTTTCACCTAGTTCTT+TGG | 0.181658 | 8.1:+36321875 | None:intergenic |
| TGGAATTTGAATTGCAAATA+TGG | 0.213248 | 8.1:-36320606 | MS.gene065207:CDS |
| ATCCATCTCATCTTTGTAAT+TGG | 0.243577 | 8.1:+36321020 | None:intergenic |
| CTGATCAAGCCTCTCAGATT+TGG | 0.276878 | 8.1:+36322217 | None:intergenic |
| TGGACTTTGCTTCTTGTGTT+TGG | 0.299210 | 8.1:+36322237 | None:intergenic |
| CTTGTCATTTGCTTCCTCTA+AGG | 0.301965 | 8.1:+36322013 | None:intergenic |
| GAAGCATATGAGAAACTTAA+AGG | 0.321495 | 8.1:-36321768 | MS.gene065207:CDS |
| CTTGTTCTAGCTTCTCAGTT+TGG | 0.340038 | 8.1:+36321406 | None:intergenic |
| AGTTGGAAGATCAATTAAAA+TGG | 0.352873 | 8.1:-36321818 | MS.gene065207:CDS |
| CCTCCTCCAACTTCTGAAAC+AGG | 0.357095 | 8.1:+36321850 | None:intergenic |
| TGCTGGAATGAATTTGAAAA+AGG | 0.359780 | 8.1:-36320188 | MS.gene065207:CDS |
| GCTTTGATCAGTGCTCAAAA+AGG | 0.360535 | 8.1:-36320931 | MS.gene065207:CDS |
| TGTGATTGCAAAAGGTACTA+TGG | 0.374974 | 8.1:-36320389 | MS.gene065207:CDS |
| CTTTCTTGCTAGACTTCAAC+TGG | 0.385561 | 8.1:+36321745 | None:intergenic |
| AGATGACCTGTTTCAGAAGT+TGG | 0.415617 | 8.1:-36321856 | MS.gene065207:CDS |
| CTAGTTCTTTACGCATCAAA+TGG | 0.429303 | 8.1:+36320542 | None:intergenic |
| AGACATTGCTATCAATGAAC+TGG | 0.433101 | 8.1:-36320656 | MS.gene065207:CDS |
| AGGGTTGGTGTTGGCCTTAG+AGG | 0.442460 | 8.1:-36322027 | MS.gene065207:CDS |
| CAACAAAACTGTCCTTAGAA+AGG | 0.448638 | 8.1:-36320327 | MS.gene065207:CDS |
| AATTTGTGAAAGAAGTGAAA+TGG | 0.449523 | 8.1:-36320626 | MS.gene065207:CDS |
| CAATTCTTCGTTGGATCCAT+AGG | 0.458400 | 8.1:+36320858 | None:intergenic |
| GGAAAAGGTTTATGAAGAGT+TGG | 0.460705 | 8.1:-36322357 | MS.gene065207:CDS |
| GAGAGCATTGTGATTGCAAA+AGG | 0.463243 | 8.1:-36320397 | MS.gene065207:CDS |
| TCTGCAAAACCTTCTCTTCG+AGG | 0.466436 | 8.1:+36320725 | None:intergenic |
| AGAGTGTGCCTTGGCTCTTA+AGG | 0.467275 | 8.1:-36321262 | MS.gene065207:CDS |
| TGATACAAGATCTCCATTCA+AGG | 0.467451 | 8.1:-36320083 | MS.gene065207:CDS |
| CAAATCTGAGAGGCTTGATC+AGG | 0.467554 | 8.1:-36322216 | MS.gene065207:CDS |
| TGGAGATCTTGTATCAGAAA+TGG | 0.469819 | 8.1:+36320090 | None:intergenic |
| TTTGGTTGACTTGTGTATCA+AGG | 0.481934 | 8.1:+36322255 | None:intergenic |
| ATGAGGAAGATTGAGTCCTA+TGG | 0.483043 | 8.1:-36320874 | MS.gene065207:CDS |
| TTCGAGGATCCGCTGACACC+TGG | 0.483841 | 8.1:+36320741 | None:intergenic |
| TGAGACAAGGTTGTTGAATG+AGG | 0.490827 | 8.1:-36321103 | MS.gene065207:CDS |
| TTCAAGTTTCTCCCACTAGT+AGG | 0.492517 | 8.1:-36320129 | MS.gene065207:CDS |
| CTACTGTTTAGCTCCTTGAA+TGG | 0.494111 | 8.1:+36320070 | None:intergenic |
| GAATTTCTGAGGCTCAGTTA+AGG | 0.498631 | 8.1:-36321047 | MS.gene065207:CDS |
| TAAGGCTAGAGAGGCCGAAT+GGG | 0.500756 | 8.1:-36321244 | MS.gene065207:CDS |
| TTCTATCCGAGAGTCCCATT+CGG | 0.501380 | 8.1:+36321230 | None:intergenic |
| CGATAGGTACAAGGAAATGC+TGG | 0.502568 | 8.1:-36320773 | MS.gene065207:CDS |
| TTTCTACATGAGCAAGAGCT+TGG | 0.503170 | 8.1:+36321610 | None:intergenic |
| CTACTTAACAAAGAGAAAGA+AGG | 0.503263 | 8.1:-36320997 | MS.gene065207:CDS |
| AACAAAACTGTCCTTAGAAA+GGG | 0.503674 | 8.1:-36320326 | MS.gene065207:CDS |
| AATGGGAAGATGAGAAAAGA+GGG | 0.508861 | 8.1:-36322046 | MS.gene065207:CDS |
| GATGTCTCTCAAAGAACTAC+AGG | 0.514350 | 8.1:-36321367 | MS.gene065207:CDS |
| AACTTTCTTTATCCTACTAG+TGG | 0.522244 | 8.1:+36320117 | None:intergenic |
| CTTCTTGCACAAGTAGATGT+TGG | 0.531012 | 8.1:-36320511 | MS.gene065207:CDS |
| CTTGCATATTCTCTTTCACA+TGG | 0.533808 | 8.1:+36320152 | None:intergenic |
| TACTTAACAAAGAGAAAGAA+GGG | 0.534851 | 8.1:-36320996 | MS.gene065207:CDS |
| AACAAGAAATTCAAGAGTTG+AGG | 0.535449 | 8.1:-36321389 | MS.gene065207:CDS |
| TTGGTTGACTTGTGTATCAA+GGG | 0.536874 | 8.1:+36322256 | None:intergenic |
| AGCTTTGAGATGTTTGATGA+TGG | 0.538214 | 8.1:+36322112 | None:intergenic |
| GGAAGAGCTTCAGATGGAGT+TGG | 0.539655 | 8.1:-36321148 | MS.gene065207:CDS |
| CTACATGAGCAAGAGCTTGG+TGG | 0.542927 | 8.1:+36321613 | None:intergenic |
| TGTCGAGGAGCTACAGAAAG+AGG | 0.543340 | 8.1:-36320458 | MS.gene065207:CDS |
| TGAAGAGTTGGATGAAGCAA+AGG | 0.545058 | 8.1:-36322345 | MS.gene065207:CDS |
| ATGAGCAAGAGCTTGGTGGC+AGG | 0.548176 | 8.1:+36321617 | None:intergenic |
| GGTTGCGAAGCAGAAGTGTT+CGG | 0.548274 | 8.1:-36321922 | MS.gene065207:CDS |
| TGAAGTCTAGCAAGAAAGAG+TGG | 0.550973 | 8.1:-36321740 | MS.gene065207:CDS |
| AAGCCTGAAAAGTTGTCTAT+CGG | 0.551031 | 8.1:-36321943 | MS.gene065207:CDS |
| AAATGGGAAGATGAGAAAAG+AGG | 0.553568 | 8.1:-36322047 | MS.gene065207:CDS |
| CTCTCTAGCCTTAAGAGCCA+AGG | 0.555892 | 8.1:+36321254 | None:intergenic |
| AGATCAATTAAAATGGAAGA+AGG | 0.558763 | 8.1:-36321811 | MS.gene065207:CDS |
| CATCAAGCAAGAGAAAGATA+AGG | 0.559133 | 8.1:-36320482 | MS.gene065207:CDS |
| TGCCAATTACAAAGATGAGA+TGG | 0.561343 | 8.1:-36321022 | MS.gene065207:CDS |
| AGGCTGCAGCTTGATAATAC+CGG | 0.564329 | 8.1:-36321549 | MS.gene065207:CDS |
| TGAGTGCTGCAATTCTTCGT+TGG | 0.564529 | 8.1:+36320849 | None:intergenic |
| TCTCGGATAGAACAATTGAC+TGG | 0.567347 | 8.1:-36321219 | MS.gene065207:CDS |
| GAATACGTGTCAGTCTGAGC+TGG | 0.570270 | 8.1:-36321190 | MS.gene065207:CDS |
| TTAAAATCATCCAAAGAACT+AGG | 0.572615 | 8.1:-36321885 | MS.gene065207:CDS |
| GGAAGCTAAAATTGCAGCAG+TGG | 0.572850 | 8.1:-36321169 | MS.gene065207:CDS |
| GGAACAGTTTAAACATCTAG+AGG | 0.574119 | 8.1:-36321790 | MS.gene065207:CDS |
| CCTGTTTCAGAAGTTGGAGG+AGG | 0.575040 | 8.1:-36321850 | MS.gene065207:CDS |
| AGAAAGCAGCGTGTTTGATG+AGG | 0.575250 | 8.1:-36320891 | MS.gene065207:CDS |
| GAGAGGCCGAATGGGACTCT+CGG | 0.575986 | 8.1:-36321236 | MS.gene065207:CDS |
| AGCATCGTGGTACTCACTAC+CGG | 0.576275 | 8.1:+36321530 | None:intergenic |
| ATTCAACAACCTTGTCTCAA+CGG | 0.580172 | 8.1:+36321107 | None:intergenic |
| TCAGCGGATCCTCGAAGAGA+AGG | 0.582418 | 8.1:-36320734 | MS.gene065207:CDS |
| TTAAGGCTAGAGAGGCCGAA+TGG | 0.584648 | 8.1:-36321245 | MS.gene065207:CDS |
| CTTGGCTCTTAAGGCTAGAG+AGG | 0.587506 | 8.1:-36321253 | MS.gene065207:CDS |
| AACACATAAAGAGTGTGCCT+TGG | 0.587663 | 8.1:-36321271 | MS.gene065207:CDS |
| ACTATTCGCAGTCGAAGTTG+AGG | 0.588490 | 8.1:-36321317 | MS.gene065207:CDS |
| TAGCAAGAAAGAGTGGGAGA+TGG | 0.589935 | 8.1:-36321733 | MS.gene065207:CDS |
| TCAGGAACTGCTTCAAAAGA+CGG | 0.590245 | 8.1:-36322198 | MS.gene065207:CDS |
| AGAGAAAGATAAGGCTGTCG+AGG | 0.591590 | 8.1:-36320473 | MS.gene065207:CDS |
| ATATTCGCTGAAAACAAAAG+AGG | 0.591664 | 8.1:-36321451 | MS.gene065207:CDS |
| GAAGCACAAATTCAAGAAGC+AGG | 0.592083 | 8.1:-36321345 | MS.gene065207:CDS |
| ACTTTCTTTATCCTACTAGT+GGG | 0.592483 | 8.1:+36320118 | None:intergenic |
| ATTTGATAGCCGTTGAGACA+AGG | 0.593242 | 8.1:-36321116 | MS.gene065207:CDS |
| TGAGAAAAGAGGGTTGGTGT+TGG | 0.596204 | 8.1:-36322036 | MS.gene065207:CDS |
| TGACCTGTTTCAGAAGTTGG+AGG | 0.601800 | 8.1:-36321853 | MS.gene065207:CDS |
| GAGGGACATGTTGAGAAGCA+TGG | 0.610311 | 8.1:-36320233 | MS.gene065207:CDS |
| GAACGAACTCGATAGGTACA+AGG | 0.613313 | 8.1:-36320782 | MS.gene065207:CDS |
| GTTGAAACAAGGAATTTCTG+AGG | 0.617749 | 8.1:-36321058 | MS.gene065207:CDS |
| GGAAGATGAGAAAAGAGGGT+TGG | 0.618029 | 8.1:-36322042 | MS.gene065207:CDS |
| GAAGTCTAGCAAGAAAGAGT+GGG | 0.620001 | 8.1:-36321739 | MS.gene065207:CDS |
| AGCTAAACAGTAGTTGCTAG+AGG | 0.620699 | 8.1:-36320060 | None:intergenic |
| TAATGCAGACACTCAACTGA+GGG | 0.630553 | 8.1:-36320251 | MS.gene065207:CDS |
| AACTGCAGAACGAACTCGAT+AGG | 0.637082 | 8.1:-36320789 | MS.gene065207:CDS |
| AGCAGTGGAAGAGCTTCAGA+TGG | 0.644604 | 8.1:-36321154 | MS.gene065207:CDS |
| CTTAGAGGAAGCAAATGACA+AGG | 0.650055 | 8.1:-36322012 | MS.gene065207:CDS |
| AAGAATCAACCAGGTGTCAG+CGG | 0.656937 | 8.1:-36320750 | MS.gene065207:CDS |
| CTAATGCAGACACTCAACTG+AGG | 0.666435 | 8.1:-36320252 | MS.gene065207:CDS |
| AAATGCTGGAAGAATCAACC+AGG | 0.678121 | 8.1:-36320759 | MS.gene065207:CDS |
| ACTTAACAAAGAGAAAGAAG+GGG | 0.682960 | 8.1:-36320995 | MS.gene065207:CDS |
| AAGCAAAGTCCAAATCTGAG+AGG | 0.711520 | 8.1:-36322226 | MS.gene065207:CDS |
| GGACATGTTGAGAAGCATGG+AGG | 0.719760 | 8.1:-36320230 | MS.gene065207:CDS |
| ATGCTGCTAGTGTTGAAACA+AGG | 0.727210 | 8.1:-36321069 | MS.gene065207:CDS |
| AAAGACGGATGAAATTACTG+AGG | 0.748447 | 8.1:-36322183 | MS.gene065207:CDS |
| CGAGCTGTAGTCTAGCATCG+TGG | 0.761722 | 8.1:+36321517 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGATGAAAAGATTAAAAAAT+GGG | - | chr8.1:36320359-36320378 | MS.gene065207:CDS | 15.0% |
| !! | TTGATGAAAAGATTAAAAAA+TGG | - | chr8.1:36320358-36320377 | MS.gene065207:CDS | 15.0% |
| ! | AATTTGTGAAAGAAGTGAAA+TGG | - | chr8.1:36321796-36321815 | MS.gene065207:CDS | 25.0% |
| ! | AGATCAATTAAAATGGAAGA+AGG | - | chr8.1:36320611-36320630 | MS.gene065207:CDS | 25.0% |
| ! | AGTTGGAAGATCAATTAAAA+TGG | - | chr8.1:36320604-36320623 | MS.gene065207:CDS | 25.0% |
| ! | TACTTAACAAAGAGAAAGAA+GGG | - | chr8.1:36321426-36321445 | MS.gene065207:CDS | 25.0% |
| ! | TGGAATTTGAATTGCAAATA+TGG | - | chr8.1:36321816-36321835 | MS.gene065207:CDS | 25.0% |
| ! | TTAAAATCATCCAAAGAACT+AGG | - | chr8.1:36320537-36320556 | MS.gene065207:CDS | 25.0% |
| !! | AAGTTGAAGTTTCAGATTTT+AGG | - | chr8.1:36320853-36320872 | MS.gene065207:CDS | 25.0% |
| !!! | TTGTTCTAGATTTTTAAGCT+TGG | + | chr8.1:36321132-36321151 | None:intergenic | 25.0% |
| AACAAAACTGTCCTTAGAAA+GGG | - | chr8.1:36322096-36322115 | MS.gene065207:CDS | 30.0% | |
| AACAAGAAATTCAAGAGTTG+AGG | - | chr8.1:36321033-36321052 | MS.gene065207:CDS | 30.0% | |
| AACTTTCTTTATCCTACTAG+TGG | + | chr8.1:36322308-36322327 | None:intergenic | 30.0% | |
| ACTTAACAAAGAGAAAGAAG+GGG | - | chr8.1:36321427-36321446 | MS.gene065207:CDS | 30.0% | |
| ACTTTCTTTATCCTACTAGT+GGG | + | chr8.1:36322307-36322326 | None:intergenic | 30.0% | |
| ATATTCGCTGAAAACAAAAG+AGG | - | chr8.1:36320971-36320990 | MS.gene065207:CDS | 30.0% | |
| ATCCATCTCATCTTTGTAAT+TGG | + | chr8.1:36321405-36321424 | None:intergenic | 30.0% | |
| CTACTTAACAAAGAGAAAGA+AGG | - | chr8.1:36321425-36321444 | MS.gene065207:CDS | 30.0% | |
| GAAGCATATGAGAAACTTAA+AGG | - | chr8.1:36320654-36320673 | MS.gene065207:CDS | 30.0% | |
| TGCTGGAATGAATTTGAAAA+AGG | - | chr8.1:36322234-36322253 | MS.gene065207:CDS | 30.0% | |
| !!! | AACTTGTTGACTTTTGTTCA+AGG | - | chr8.1:36322121-36322140 | MS.gene065207:CDS | 30.0% |
| !!! | ACTTGTTGACTTTTGTTCAA+GGG | - | chr8.1:36322122-36322141 | MS.gene065207:CDS | 30.0% |
| AAAGACGGATGAAATTACTG+AGG | - | chr8.1:36320239-36320258 | MS.gene065207:CDS | 35.0% | |
| AAATGGGAAGATGAGAAAAG+AGG | - | chr8.1:36320375-36320394 | MS.gene065207:CDS | 35.0% | |
| AAGCCTGAAAAGTTGTCTAT+CGG | - | chr8.1:36320479-36320498 | MS.gene065207:CDS | 35.0% | |
| AATGGGAAGATGAGAAAAGA+GGG | - | chr8.1:36320376-36320395 | MS.gene065207:CDS | 35.0% | |
| AGACATTGCTATCAATGAAC+TGG | - | chr8.1:36321766-36321785 | MS.gene065207:CDS | 35.0% | |
| ATTCAACAACCTTGTCTCAA+CGG | + | chr8.1:36321318-36321337 | None:intergenic | 35.0% | |
| CAACAAAACTGTCCTTAGAA+AGG | - | chr8.1:36322095-36322114 | MS.gene065207:CDS | 35.0% | |
| CAGTTCTTTGTTGCATTCTT+TGG | + | chr8.1:36321618-36321637 | None:intergenic | 35.0% | |
| CATCAAGCAAGAGAAAGATA+AGG | - | chr8.1:36321940-36321959 | MS.gene065207:CDS | 35.0% | |
| CTTGCATATTCTCTTTCACA+TGG | + | chr8.1:36322273-36322292 | None:intergenic | 35.0% | |
| GGAAAAGGTTTATGAAGAGT+TGG | - | chr8.1:36320065-36320084 | MS.gene065207:CDS | 35.0% | |
| GGAACAGTTTAAACATCTAG+AGG | - | chr8.1:36320632-36320651 | MS.gene065207:CDS | 35.0% | |
| GTTGAAACAAGGAATTTCTG+AGG | - | chr8.1:36321364-36321383 | MS.gene065207:CDS | 35.0% | |
| TGATACAAGATCTCCATTCA+AGG | - | chr8.1:36322339-36322358 | MS.gene065207:CDS | 35.0% | |
| TGCCAATTACAAAGATGAGA+TGG | - | chr8.1:36321400-36321419 | MS.gene065207:CDS | 35.0% | |
| TGGAGATCTTGTATCAGAAA+TGG | + | chr8.1:36322335-36322354 | None:intergenic | 35.0% | |
| ! | ATCTCTTTCACCTAGTTCTT+TGG | + | chr8.1:36320550-36320569 | None:intergenic | 35.0% |
| ! | CAACAAGTTTTCCCTTTCTA+AGG | + | chr8.1:36322110-36322129 | None:intergenic | 35.0% |
| ! | CTAGTTCTTTACGCATCAAA+TGG | + | chr8.1:36321883-36321902 | None:intergenic | 35.0% |
| !! | ACAGAAAGAGGTTGTTTTGT+TGG | - | chr8.1:36321976-36321995 | MS.gene065207:CDS | 35.0% |
| !! | AGCTTTGAGATGTTTGATGA+TGG | + | chr8.1:36320313-36320332 | None:intergenic | 35.0% |
| !! | TGTGATTGCAAAAGGTACTA+TGG | - | chr8.1:36322033-36322052 | MS.gene065207:CDS | 35.0% |
| !! | TTGGTTGACTTGTGTATCAA+GGG | + | chr8.1:36320169-36320188 | None:intergenic | 35.0% |
| !! | TTTGGTTGACTTGTGTATCA+AGG | + | chr8.1:36320170-36320189 | None:intergenic | 35.0% |
| !!! | GAGGAATCTTTTGAGATTGA+TGG | - | chr8.1:36322211-36322230 | MS.gene065207:CDS | 35.0% |
| AAATGCTGGAAGAATCAACC+AGG | - | chr8.1:36321663-36321682 | MS.gene065207:CDS | 40.0% | |
| AAGCAAAGTCCAAATCTGAG+AGG | - | chr8.1:36320196-36320215 | MS.gene065207:CDS | 40.0% | |
| AGATGACCTGTTTCAGAAGT+TGG | - | chr8.1:36320566-36320585 | MS.gene065207:CDS | 40.0% | |
| ATGAGGAAGATTGAGTCCTA+TGG | - | chr8.1:36321548-36321567 | MS.gene065207:CDS | 40.0% | |
| CAATTCTTCGTTGGATCCAT+AGG | + | chr8.1:36321567-36321586 | None:intergenic | 40.0% | |
| CTTAGAGGAAGCAAATGACA+AGG | - | chr8.1:36320410-36320429 | MS.gene065207:CDS | 40.0% | |
| CTTCTTGCACAAGTAGATGT+TGG | - | chr8.1:36321911-36321930 | MS.gene065207:CDS | 40.0% | |
| CTTTCTTGCTAGACTTCAAC+TGG | + | chr8.1:36320680-36320699 | None:intergenic | 40.0% | |
| GAAGCACAAATTCAAGAAGC+AGG | - | chr8.1:36321077-36321096 | MS.gene065207:CDS | 40.0% | |
| GAAGTCTAGCAAGAAAGAGT+GGG | - | chr8.1:36320683-36320702 | MS.gene065207:CDS | 40.0% | |
| GATGTCTCTCAAAGAACTAC+AGG | - | chr8.1:36321055-36321074 | MS.gene065207:CDS | 40.0% | |
| GCTTTGATCAGTGCTCAAAA+AGG | - | chr8.1:36321491-36321510 | MS.gene065207:CDS | 40.0% | |
| TAATGCAGACACTCAACTGA+GGG | - | chr8.1:36322171-36322190 | MS.gene065207:CDS | 40.0% | |
| TCAGGAACTGCTTCAAAAGA+CGG | - | chr8.1:36320224-36320243 | MS.gene065207:CDS | 40.0% | |
| TCTCGGATAGAACAATTGAC+TGG | - | chr8.1:36321203-36321222 | MS.gene065207:CDS | 40.0% | |
| TGAAGAGTTGGATGAAGCAA+AGG | - | chr8.1:36320077-36320096 | MS.gene065207:CDS | 40.0% | |
| TGAAGTCTAGCAAGAAAGAG+TGG | - | chr8.1:36320682-36320701 | MS.gene065207:CDS | 40.0% | |
| TGAGACAAGGTTGTTGAATG+AGG | - | chr8.1:36321319-36321338 | MS.gene065207:CDS | 40.0% | |
| TGGACTTTGCTTCTTGTGTT+TGG | + | chr8.1:36320188-36320207 | None:intergenic | 40.0% | |
| TTTCTACATGAGCAAGAGCT+TGG | + | chr8.1:36320815-36320834 | None:intergenic | 40.0% | |
| ! | AACACATAAAGAGTGTGCCT+TGG | - | chr8.1:36321151-36321170 | MS.gene065207:CDS | 40.0% |
| ! | ATGCTGCTAGTGTTGAAACA+AGG | - | chr8.1:36321353-36321372 | MS.gene065207:CDS | 40.0% |
| ! | ATTTGATAGCCGTTGAGACA+AGG | - | chr8.1:36321306-36321325 | MS.gene065207:CDS | 40.0% |
| ! | CAACCGATAGACAACTTTTC+AGG | + | chr8.1:36320485-36320504 | None:intergenic | 40.0% |
| ! | CTACTGTTTAGCTCCTTGAA+TGG | + | chr8.1:36322355-36322374 | None:intergenic | 40.0% |
| ! | CTTGTCATTTGCTTCCTCTA+AGG | + | chr8.1:36320412-36320431 | None:intergenic | 40.0% |
| ! | TTCAAGTTTCTCCCACTAGT+AGG | - | chr8.1:36322293-36322312 | MS.gene065207:CDS | 40.0% |
| !! | CTTGTTCTAGCTTCTCAGTT+TGG | + | chr8.1:36321019-36321038 | None:intergenic | 40.0% |
| !! | GAATTTCTGAGGCTCAGTTA+AGG | - | chr8.1:36321375-36321394 | MS.gene065207:CDS | 40.0% |
| !! | GAGAGCATTGTGATTGCAAA+AGG | - | chr8.1:36322025-36322044 | MS.gene065207:CDS | 40.0% |
| !!! | TCTTTTGAGATTGATGGTGC+TGG | - | chr8.1:36322217-36322236 | MS.gene065207:CDS | 40.0% |
| AACTGCAGAACGAACTCGAT+AGG | - | chr8.1:36321633-36321652 | MS.gene065207:CDS | 45.0% | |
| AAGAATCAACCAGGTGTCAG+CGG | - | chr8.1:36321672-36321691 | MS.gene065207:CDS | 45.0% | |
| ACTATTCGCAGTCGAAGTTG+AGG | - | chr8.1:36321105-36321124 | MS.gene065207:CDS | 45.0% | |
| AGAAAGCAGCGTGTTTGATG+AGG | - | chr8.1:36321531-36321550 | MS.gene065207:CDS | 45.0% | |
| AGAGAAAGATAAGGCTGTCG+AGG | - | chr8.1:36321949-36321968 | MS.gene065207:CDS | 45.0% | |
| CAAATCTGAGAGGCTTGATC+AGG | - | chr8.1:36320206-36320225 | MS.gene065207:CDS | 45.0% | |
| CGATAGGTACAAGGAAATGC+TGG | - | chr8.1:36321649-36321668 | MS.gene065207:CDS | 45.0% | |
| CTAATGCAGACACTCAACTG+AGG | - | chr8.1:36322170-36322189 | MS.gene065207:CDS | 45.0% | |
| CTGATCAAGCCTCTCAGATT+TGG | + | chr8.1:36320208-36320227 | None:intergenic | 45.0% | |
| GAACGAACTCGATAGGTACA+AGG | - | chr8.1:36321640-36321659 | MS.gene065207:CDS | 45.0% | |
| GGAAGATGAGAAAAGAGGGT+TGG | - | chr8.1:36320380-36320399 | MS.gene065207:CDS | 45.0% | |
| GGAAGCTAAAATTGCAGCAG+TGG | - | chr8.1:36321253-36321272 | MS.gene065207:CDS | 45.0% | |
| TAGCAAGAAAGAGTGGGAGA+TGG | - | chr8.1:36320689-36320708 | MS.gene065207:CDS | 45.0% | |
| TCTGCAAAACCTTCTCTTCG+AGG | + | chr8.1:36321700-36321719 | None:intergenic | 45.0% | |
| TGACCTGTTTCAGAAGTTGG+AGG | - | chr8.1:36320569-36320588 | MS.gene065207:CDS | 45.0% | |
| TTCTATCCGAGAGTCCCATT+CGG | + | chr8.1:36321195-36321214 | None:intergenic | 45.0% | |
| ! | AGGCTGCAGCTTGATAATAC+CGG | - | chr8.1:36320873-36320892 | MS.gene065207:CDS | 45.0% |
| ! | TGAGTGCTGCAATTCTTCGT+TGG | + | chr8.1:36321576-36321595 | None:intergenic | 45.0% |
| !! | TGAGAAAAGAGGGTTGGTGT+TGG | - | chr8.1:36320386-36320405 | MS.gene065207:CDS | 45.0% |
| !!! | CAACTTCGAGTCGCTTTTTC+AGG | + | chr8.1:36320839-36320858 | None:intergenic | 45.0% |
| AGCAGTGGAAGAGCTTCAGA+TGG | - | chr8.1:36321268-36321287 | MS.gene065207:CDS | 50.0% | |
| AGCATCGTGGTACTCACTAC+CGG | + | chr8.1:36320895-36320914 | None:intergenic | 50.0% | |
| CCTGTTTCAGAAGTTGGAGG+AGG | - | chr8.1:36320572-36320591 | MS.gene065207:CDS | 50.0% | |
| CTACATGAGCAAGAGCTTGG+TGG | + | chr8.1:36320812-36320831 | None:intergenic | 50.0% | |
| GAATACGTGTCAGTCTGAGC+TGG | - | chr8.1:36321232-36321251 | MS.gene065207:CDS | 50.0% | |
| GAGGGACATGTTGAGAAGCA+TGG | - | chr8.1:36322189-36322208 | MS.gene065207:CDS | 50.0% | |
| GGAAGAGCTTCAGATGGAGT+TGG | - | chr8.1:36321274-36321293 | MS.gene065207:CDS | 50.0% | |
| GGAGGAGGAAAAAGCGAAGT+TGG | - | chr8.1:36320587-36320606 | MS.gene065207:CDS | 50.0% | |
| TAAGGCTAGAGAGGCCGAAT+GGG | - | chr8.1:36321178-36321197 | MS.gene065207:CDS | 50.0% | |
| TGTCGAGGAGCTACAGAAAG+AGG | - | chr8.1:36321964-36321983 | MS.gene065207:CDS | 50.0% | |
| TTAAGGCTAGAGAGGCCGAA+TGG | - | chr8.1:36321177-36321196 | MS.gene065207:CDS | 50.0% | |
| ! | AGAGTGTGCCTTGGCTCTTA+AGG | - | chr8.1:36321160-36321179 | MS.gene065207:CDS | 50.0% |
| ! | CTTGGCTCTTAAGGCTAGAG+AGG | - | chr8.1:36321169-36321188 | MS.gene065207:CDS | 50.0% |
| ! | GGACATGTTGAGAAGCATGG+AGG | - | chr8.1:36322192-36322211 | MS.gene065207:CDS | 50.0% |
| !! | CCTCCTCCAACTTCTGAAAC+AGG | + | chr8.1:36320575-36320594 | None:intergenic | 50.0% |
| !! | CTCTCTAGCCTTAAGAGCCA+AGG | + | chr8.1:36321171-36321190 | None:intergenic | 50.0% |
| !! | GGTTGCGAAGCAGAAGTGTT+CGG | - | chr8.1:36320500-36320519 | MS.gene065207:CDS | 50.0% |
| CGAGCTGTAGTCTAGCATCG+TGG | + | chr8.1:36320908-36320927 | None:intergenic | 55.0% | |
| TCAGCGGATCCTCGAAGAGA+AGG | - | chr8.1:36321688-36321707 | MS.gene065207:CDS | 55.0% | |
| ! | ATGAGCAAGAGCTTGGTGGC+AGG | + | chr8.1:36320808-36320827 | None:intergenic | 55.0% |
| !! | AGGGTTGGTGTTGGCCTTAG+AGG | - | chr8.1:36320395-36320414 | MS.gene065207:CDS | 55.0% |
| GAGAGGCCGAATGGGACTCT+CGG | - | chr8.1:36321186-36321205 | MS.gene065207:CDS | 60.0% | |
| TTCGAGGATCCGCTGACACC+TGG | + | chr8.1:36321684-36321703 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 36320063 | 36322381 | 36320063 | ID=MS.gene065207 |
| chr8.1 | mRNA | 36320063 | 36322381 | 36320063 | ID=MS.gene065207.t1;Parent=MS.gene065207 |
| chr8.1 | exon | 36320063 | 36322381 | 36320063 | ID=MS.gene065207.t1.exon1;Parent=MS.gene065207.t1 |
| chr8.1 | CDS | 36320063 | 36322381 | 36320063 | ID=cds.MS.gene065207.t1;Parent=MS.gene065207.t1 |
| Gene Sequence |
| Protein sequence |
