Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065368.t1 | XP_003625498.2 | 97.1 | 412 | 8 | 1 | 1 | 408 | 1 | 412 | 1.20E-206 | 729.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065368.t1 | O80925 | 59.1 | 391 | 102 | 8 | 1 | 360 | 1 | 364 | 4.9e-113 | 409.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065368.t1 | Q2HVU4 | 97.1 | 412 | 8 | 1 | 1 | 408 | 1 | 412 | 8.3e-207 | 729.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053143 | MS.gene065368 | 0.804848 | 1.77E-49 | -1.69E-46 |
| MS.gene054585 | MS.gene065368 | 0.820913 | 5.34E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065368.t1 | MTR_7g099830 | 96.840 | 443 | 10 | 1 | 1 | 439 | 1 | 443 | 0.0 | 881 |
| MS.gene065368.t1 | MTR_1g069000 | 64.242 | 495 | 105 | 15 | 1 | 438 | 1 | 480 | 0.0 | 580 |
| MS.gene065368.t1 | MTR_8g067090 | 43.243 | 148 | 67 | 3 | 7 | 151 | 13 | 146 | 5.29e-31 | 123 |
| MS.gene065368.t1 | MTR_8g471120 | 43.243 | 148 | 67 | 3 | 7 | 151 | 13 | 146 | 5.29e-31 | 123 |
| MS.gene065368.t1 | MTR_8g067080 | 47.619 | 105 | 55 | 0 | 7 | 111 | 13 | 117 | 4.57e-30 | 120 |
| MS.gene065368.t1 | MTR_8g067080 | 47.619 | 105 | 55 | 0 | 7 | 111 | 13 | 117 | 5.14e-30 | 120 |
| MS.gene065368.t1 | MTR_8g471110 | 47.619 | 105 | 55 | 0 | 7 | 111 | 13 | 117 | 5.14e-30 | 120 |
| MS.gene065368.t1 | MTR_2g030230 | 48.810 | 84 | 42 | 1 | 5 | 87 | 19 | 102 | 7.96e-21 | 93.2 |
| MS.gene065368.t1 | MTR_8g088320 | 45.455 | 88 | 47 | 1 | 1 | 87 | 6 | 93 | 3.41e-20 | 91.3 |
| MS.gene065368.t1 | MTR_2g080950 | 46.835 | 79 | 42 | 0 | 5 | 83 | 17 | 95 | 4.93e-20 | 92.4 |
| MS.gene065368.t1 | MTR_8g464390 | 46.835 | 79 | 42 | 0 | 5 | 83 | 17 | 95 | 1.50e-19 | 91.3 |
| MS.gene065368.t1 | MTR_6g080710 | 51.351 | 74 | 36 | 0 | 4 | 77 | 16 | 89 | 5.74e-19 | 87.0 |
| MS.gene065368.t1 | MTR_8g038400 | 48.718 | 78 | 39 | 1 | 5 | 81 | 18 | 95 | 9.55e-18 | 84.7 |
| MS.gene065368.t1 | MTR_3g017500 | 48.052 | 77 | 39 | 1 | 6 | 81 | 23 | 99 | 8.97e-17 | 82.0 |
| MS.gene065368.t1 | MTR_3g017500 | 48.052 | 77 | 39 | 1 | 6 | 81 | 53 | 129 | 1.60e-16 | 81.3 |
| MS.gene065368.t1 | MTR_4g074170 | 54.717 | 53 | 24 | 0 | 10 | 62 | 485 | 537 | 1.75e-13 | 73.2 |
| MS.gene065368.t1 | MTR_8g100100 | 46.970 | 66 | 33 | 1 | 19 | 82 | 515 | 580 | 5.21e-13 | 71.6 |
| MS.gene065368.t1 | MTR_8g100100 | 46.970 | 66 | 33 | 1 | 19 | 82 | 509 | 574 | 5.28e-13 | 71.6 |
| MS.gene065368.t1 | MTR_7g020860 | 50.000 | 64 | 30 | 1 | 16 | 77 | 514 | 577 | 1.70e-12 | 70.1 |
| MS.gene065368.t1 | MTR_7g020860 | 47.826 | 69 | 34 | 1 | 16 | 82 | 514 | 582 | 1.70e-12 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065368.t1 | AT2G37550 | 59.701 | 469 | 144 | 12 | 1 | 438 | 1 | 455 | 3.24e-173 | 493 |
| MS.gene065368.t1 | AT2G37550 | 59.701 | 469 | 144 | 12 | 1 | 438 | 1 | 455 | 3.24e-173 | 493 |
| MS.gene065368.t1 | AT3G53710 | 58.750 | 480 | 134 | 18 | 1 | 438 | 1 | 458 | 1.53e-165 | 474 |
| MS.gene065368.t1 | AT3G53710 | 58.750 | 480 | 134 | 18 | 1 | 438 | 1 | 458 | 1.53e-165 | 474 |
| MS.gene065368.t1 | AT3G53710 | 58.750 | 480 | 134 | 18 | 1 | 438 | 1 | 458 | 1.53e-165 | 474 |
| MS.gene065368.t1 | AT4G17890 | 50.435 | 115 | 52 | 1 | 7 | 116 | 16 | 130 | 8.44e-33 | 128 |
| MS.gene065368.t1 | AT4G17890 | 50.435 | 115 | 52 | 1 | 7 | 116 | 16 | 130 | 1.61e-32 | 127 |
| MS.gene065368.t1 | AT5G46750 | 49.565 | 115 | 53 | 1 | 7 | 116 | 13 | 127 | 1.19e-31 | 125 |
| MS.gene065368.t1 | AT2G35210 | 50.476 | 105 | 52 | 0 | 7 | 111 | 13 | 117 | 1.30e-30 | 122 |
| MS.gene065368.t1 | AT2G35210 | 50.476 | 105 | 52 | 0 | 7 | 111 | 13 | 117 | 2.93e-30 | 120 |
| MS.gene065368.t1 | AT4G05330 | 48.810 | 84 | 42 | 1 | 5 | 87 | 16 | 99 | 4.37e-22 | 97.1 |
| MS.gene065368.t1 | AT4G05330 | 48.810 | 84 | 42 | 1 | 5 | 87 | 16 | 99 | 4.37e-22 | 97.1 |
| MS.gene065368.t1 | AT4G21160 | 47.619 | 84 | 43 | 1 | 5 | 87 | 16 | 99 | 7.64e-21 | 93.6 |
| MS.gene065368.t1 | AT4G21160 | 47.619 | 84 | 43 | 1 | 5 | 87 | 16 | 99 | 7.64e-21 | 93.6 |
| MS.gene065368.t1 | AT4G21160 | 47.619 | 84 | 43 | 1 | 5 | 87 | 16 | 99 | 7.64e-21 | 93.6 |
| MS.gene065368.t1 | AT4G21160 | 47.619 | 84 | 43 | 1 | 5 | 87 | 16 | 99 | 7.64e-21 | 93.6 |
| MS.gene065368.t1 | AT3G17660 | 52.113 | 71 | 34 | 0 | 7 | 77 | 19 | 89 | 1.18e-20 | 89.7 |
| MS.gene065368.t1 | AT3G17660 | 52.113 | 71 | 34 | 0 | 7 | 77 | 19 | 89 | 1.59e-20 | 90.5 |
| MS.gene065368.t1 | AT3G17660 | 50.000 | 74 | 37 | 0 | 4 | 77 | 16 | 89 | 3.86e-20 | 89.7 |
| MS.gene065368.t1 | AT5G54310 | 46.988 | 83 | 43 | 1 | 2 | 83 | 13 | 95 | 4.61e-20 | 92.8 |
| MS.gene065368.t1 | AT3G07940 | 29.864 | 221 | 124 | 7 | 6 | 207 | 49 | 257 | 3.11e-19 | 87.8 |
| MS.gene065368.t1 | AT3G07940 | 50.649 | 77 | 37 | 1 | 6 | 81 | 49 | 125 | 1.11e-18 | 87.8 |
| MS.gene065368.t1 | AT1G60860 | 57.143 | 56 | 21 | 1 | 7 | 62 | 362 | 414 | 2.30e-14 | 75.9 |
| MS.gene065368.t1 | AT1G60860 | 57.143 | 56 | 21 | 1 | 7 | 62 | 473 | 525 | 2.83e-14 | 75.5 |
| MS.gene065368.t1 | AT1G60860 | 57.143 | 56 | 21 | 1 | 7 | 62 | 302 | 354 | 2.90e-14 | 75.5 |
| MS.gene065368.t1 | AT5G13300 | 48.000 | 75 | 37 | 1 | 10 | 82 | 507 | 581 | 1.89e-13 | 73.2 |
| MS.gene065368.t1 | AT3G17660 | 52.941 | 51 | 24 | 0 | 4 | 54 | 16 | 66 | 2.22e-13 | 69.7 |
| MS.gene065368.t1 | AT5G61980 | 46.377 | 69 | 35 | 1 | 16 | 82 | 510 | 578 | 7.54e-13 | 71.2 |
| MS.gene065368.t1 | AT1G10870 | 50.943 | 53 | 26 | 0 | 10 | 62 | 473 | 525 | 2.14e-12 | 69.7 |
| MS.gene065368.t1 | AT1G10870 | 50.943 | 53 | 26 | 0 | 10 | 62 | 473 | 525 | 2.31e-12 | 69.7 |
Find 144 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGCCCATTGGGGATTCTTT+TGG | 0.237541 | 7.4:-10413994 | None:intergenic |
| GTGGTGGTTGGGATGATAAT+TGG | 0.288748 | 7.4:+10414365 | MS.gene065368:CDS |
| GTACTTCCTTCCTTGTATCT+TGG | 0.301608 | 7.4:-10416758 | None:intergenic |
| AAATTCATCATCATCATCTT+TGG | 0.303825 | 7.4:-10416835 | None:intergenic |
| CAGAGTACTGGTGATGTAAT+TGG | 0.303983 | 7.4:+10414451 | MS.gene065368:CDS |
| ATTCCCATTCGGGTAATCTT+TGG | 0.308780 | 7.4:-10416583 | None:intergenic |
| CGATCTCCAGATCAAGAAAA+TGG | 0.320437 | 7.4:+10414120 | MS.gene065368:CDS |
| GGAGGCTTCTGCTGCGAATA+AGG | 0.322230 | 7.4:+10414546 | MS.gene065368:CDS |
| GAATTTGATGATAAATCTTT+TGG | 0.327269 | 7.4:+10416852 | MS.gene065368:CDS |
| GCCGAGGCCACGGTGTTTGC+CGG | 0.343680 | 7.4:-10414053 | None:intergenic |
| GGTGGGAAGTATGTTGGATT+TGG | 0.343971 | 7.4:+10414634 | MS.gene065368:CDS |
| ACTCAAACTCTTGGGATGAT+TGG | 0.347103 | 7.4:+10416730 | MS.gene065368:CDS |
| CGCGTGGTGGTGGTGATATT+AGG | 0.356783 | 7.4:+10414422 | MS.gene065368:CDS |
| CATAATGGGACGTCAGGTTC+TGG | 0.362771 | 7.4:+10416876 | MS.gene065368:CDS |
| TTCTCAATACGGAATCTCTA+AGG | 0.367159 | 7.4:+10414177 | MS.gene065368:CDS |
| GTTGGATTTGGATCTAGTCC+TGG | 0.369759 | 7.4:+10414646 | MS.gene065368:CDS |
| GCAGATCTTGTTTGAAGGTT+CGG | 0.385181 | 7.4:-10413960 | None:intergenic |
| TGGTGGTTGGGATGATAATT+GGG | 0.396409 | 7.4:+10414366 | MS.gene065368:CDS |
| TGATGAAGGTTGTCCTTCTC+TGG | 0.401226 | 7.4:-10416685 | None:intergenic |
| GTAAGAAACGGAGGCCCATT+GGG | 0.401948 | 7.4:-10414005 | None:intergenic |
| TCCTCATAATAATGATGATT+GGG | 0.405151 | 7.4:+10416797 | MS.gene065368:CDS |
| CTCAAACTCTTGGGATGATT+GGG | 0.405409 | 7.4:+10416731 | MS.gene065368:CDS |
| CGAATGGGAATTCTGATAAC+TGG | 0.408968 | 7.4:+10416595 | MS.gene065368:CDS |
| GGTGATGTAATTGGATTTGT+TGG | 0.409468 | 7.4:+10414460 | MS.gene065368:CDS |
| CAATGGGCCTCCGTTTCTTA+CGG | 0.411920 | 7.4:+10414007 | MS.gene065368:CDS |
| ACGTCAGGTTCTGGCTGGAC+AGG | 0.413255 | 7.4:+10416885 | MS.gene065368:CDS |
| TAATGATGATTGGGCTGGTT+GGG | 0.416996 | 7.4:+10416806 | MS.gene065368:CDS |
| TCCGGCAAACACCGTGGCCT+CGG | 0.417844 | 7.4:+10414052 | MS.gene065368:CDS |
| CTCCTCATAATAATGATGAT+TGG | 0.428305 | 7.4:+10416796 | MS.gene065368:CDS |
| GTATAATTCAAATGCTGCTT+CGG | 0.429421 | 7.4:+10414219 | MS.gene065368:CDS |
| ATCCCAAGAGTTTGAGTGAT+AGG | 0.432160 | 7.4:-10416724 | None:intergenic |
| GCGTGATCCACCTGTTGTTA+AGG | 0.434361 | 7.4:+10414285 | MS.gene065368:CDS |
| TATTTACACGAGGACACAAT+TGG | 0.435643 | 7.4:+10414525 | MS.gene065368:CDS |
| GATGGTGATAGTTATGGTTA+TGG | 0.442183 | 7.4:+10414397 | MS.gene065368:CDS |
| AACACGTTCCTTTCTCAATA+CGG | 0.445873 | 7.4:+10414166 | MS.gene065368:CDS |
| GATTTCAATCAAGAGAATAA+AGG | 0.448695 | 7.4:+10416642 | MS.gene065368:CDS |
| ACAGGAGGAGGCTTTCACTA+AGG | 0.450059 | 7.4:+10416903 | MS.gene065368:CDS |
| TTTGGTCATAATGGGACGTC+AGG | 0.452576 | 7.4:+10416870 | MS.gene065368:CDS |
| CAGTTATCAGAATTCCCATT+CGG | 0.453777 | 7.4:-10416594 | None:intergenic |
| GCTAGTACTCGTGCTGGAAA+AGG | 0.455171 | 7.4:+10414313 | MS.gene065368:CDS |
| AGCAGCATTTGAATTATACT+TGG | 0.456159 | 7.4:-10414215 | None:intergenic |
| ATACCTATCACTCAAACTCT+TGG | 0.456728 | 7.4:+10416721 | MS.gene065368:CDS |
| CATGAAAACGCCGTAAGAAA+CGG | 0.457995 | 7.4:-10414017 | None:intergenic |
| CGTAAGAAACGGAGGCCCAT+TGG | 0.458376 | 7.4:-10414006 | None:intergenic |
| GTAATTGGATTTGTTGGAAG+TGG | 0.458947 | 7.4:+10414466 | MS.gene065368:CDS |
| GGTTCTGGCTGGACAGGAGG+AGG | 0.461646 | 7.4:+10416891 | MS.gene065368:CDS |
| GTCTTCCTCCGTCGCAGGGT+GGG | 0.462412 | 7.4:+10414617 | MS.gene065368:CDS |
| TAGAGATTCCGTATTGAGAA+AGG | 0.463462 | 7.4:-10414174 | None:intergenic |
| CTAGCATTCTCCTTAACAAC+AGG | 0.465760 | 7.4:-10414295 | None:intergenic |
| GGAGAGTCTTCCTCCGTCGC+AGG | 0.472411 | 7.4:+10414612 | MS.gene065368:CDS |
| TCGACGCAGATCTTGTTTGA+AGG | 0.475560 | 7.4:-10413965 | None:intergenic |
| GATCCGTTACAATGGATTCA+TGG | 0.484084 | 7.4:+10414095 | MS.gene065368:CDS |
| TGGAAAAGGAAAGCCACCTC+TGG | 0.486965 | 7.4:+10414327 | MS.gene065368:CDS |
| CATGGCGTTGGCCTCTCAAA+AGG | 0.490970 | 7.4:+10416548 | MS.gene065368:CDS |
| GCCCAATCATCATTATTATG+AGG | 0.492124 | 7.4:-10416798 | None:intergenic |
| AAGGTTCGGATTGGAGTTCA+CGG | 0.501839 | 7.4:-10413946 | None:intergenic |
| TTGGATTTGGATCTAGTCCT+GGG | 0.501961 | 7.4:+10414647 | MS.gene065368:CDS |
| TGAGGAGCTGATCCTTTAGC+TGG | 0.502206 | 7.4:-10416780 | None:intergenic |
| TACCTATCACTCAAACTCTT+GGG | 0.505606 | 7.4:+10416722 | MS.gene065368:CDS |
| TCAGTTTGTCCACCTGATGA+AGG | 0.509718 | 7.4:-10416699 | None:intergenic |
| AATGATGATGGTGATAGTTA+TGG | 0.511012 | 7.4:+10414391 | MS.gene065368:CDS |
| GAGAATGCTAGTACTCGTGC+TGG | 0.511201 | 7.4:+10414307 | MS.gene065368:CDS |
| TGAGGAGAAATCCTTTGAGC+AGG | 0.512110 | 7.4:-10414670 | None:intergenic |
| CTACGTCGAATGGTGGTGGT+TGG | 0.519909 | 7.4:+10414353 | MS.gene065368:CDS |
| CGATCGCGGAAGGTCGTTCG+TGG | 0.522521 | 7.4:+10414263 | MS.gene065368:CDS |
| AGATGTGAACGCCGAGGCCA+CGG | 0.522534 | 7.4:-10414063 | None:intergenic |
| GGACATGGGGTATAATGAAA+GGG | 0.522706 | 7.4:+10416523 | MS.gene065368:CDS |
| TACGTCGAATGGTGGTGGTT+GGG | 0.524169 | 7.4:+10414354 | MS.gene065368:CDS |
| CTAGTCCTGGGCCTGCTCAA+AGG | 0.524286 | 7.4:+10414659 | MS.gene065368:CDS |
| TCACCAAAGATTACCCGAAT+GGG | 0.525967 | 7.4:+10416580 | MS.gene065368:CDS |
| ACTCAGAAGACATCAGAGAT+TGG | 0.527015 | 7.4:+10416495 | MS.gene065368:CDS |
| TCTTGTTTGAAGGTTCGGAT+TGG | 0.534491 | 7.4:-10413955 | None:intergenic |
| ATGGGACGTCAGGTTCTGGC+TGG | 0.534980 | 7.4:+10416880 | MS.gene065368:CDS |
| CCTCTGGCTGCTACGTCGAA+TGG | 0.535310 | 7.4:+10414343 | MS.gene065368:CDS |
| GGGTATAATGAAAGGGGTCA+TGG | 0.536054 | 7.4:+10416530 | MS.gene065368:CDS |
| CGCATTCAAGCGATCGCGGA+AGG | 0.537050 | 7.4:+10414253 | MS.gene065368:CDS |
| AGTTATCAGAATTCCCATTC+GGG | 0.537129 | 7.4:-10416593 | None:intergenic |
| TACTTCCCACCCTGCGACGG+AGG | 0.538040 | 7.4:-10414622 | None:intergenic |
| CAGAGATTGGACAAAGGACA+TGG | 0.538329 | 7.4:+10416508 | MS.gene065368:CDS |
| AGAGAAGGACAACCTTCATC+AGG | 0.539207 | 7.4:+10416687 | MS.gene065368:CDS |
| GGGAATTGGTAAATTGTCCA+TGG | 0.539257 | 7.4:+10414834 | MS.gene065368:intron |
| GAAATCCTTTGAGCAGGCCC+AGG | 0.541666 | 7.4:-10414664 | None:intergenic |
| GGTTATGGATCGCGTGGTGG+TGG | 0.546645 | 7.4:+10414412 | MS.gene065368:CDS |
| ATTAGGAGGAATCAGAGTAC+TGG | 0.548491 | 7.4:+10414439 | MS.gene065368:CDS |
| TTCCCAAAAGAATCCCCAAT+GGG | 0.549288 | 7.4:+10413991 | MS.gene065368:CDS |
| CAGATCAAGAAAATGGAAGC+AGG | 0.550806 | 7.4:+10414127 | MS.gene065368:CDS |
| CATAATAATGATGATTGGGC+TGG | 0.551691 | 7.4:+10416801 | MS.gene065368:CDS |
| TCGCAGGGTGGGAAGTATGT+TGG | 0.551854 | 7.4:+10414628 | MS.gene065368:CDS |
| AAAGGAACGTGTTGAGATTG+CGG | 0.551893 | 7.4:-10414156 | None:intergenic |
| TGCGACGGAGGAAGACTCTC+CGG | 0.552924 | 7.4:-10414610 | None:intergenic |
| AGGAAGGAAGTACCAGCTAA+AGG | 0.556691 | 7.4:+10416768 | MS.gene065368:CDS |
| TCTTCTACTTCTACCAGAGA+AGG | 0.557439 | 7.4:+10416672 | MS.gene065368:CDS |
| AATGAAAGGGGTCATGGCGT+TGG | 0.559488 | 7.4:+10416536 | MS.gene065368:CDS |
| GCTGCTACGTCGAATGGTGG+TGG | 0.564958 | 7.4:+10414349 | MS.gene065368:CDS |
| TTACACGAGGACACAATTGG+AGG | 0.568291 | 7.4:+10414528 | MS.gene065368:CDS |
| GTTGGCCTCTCAAAAGGTTG+AGG | 0.569071 | 7.4:+10416554 | MS.gene065368:CDS |
| GGCGGAGAATGAATCGAGAC+CGG | 0.572935 | 7.4:+10414591 | MS.gene065368:CDS |
| TTCACCAAAGATTACCCGAA+TGG | 0.575200 | 7.4:+10416579 | MS.gene065368:CDS |
| CTTCGTCCGATCCGTTACAA+TGG | 0.578327 | 7.4:+10414087 | MS.gene065368:CDS |
| AGGACATGGGGTATAATGAA+AGG | 0.578601 | 7.4:+10416522 | MS.gene065368:CDS |
| ACCGCATCATGGCGGCGACA+CGG | 0.578817 | 7.4:+10413918 | None:intergenic |
| GCATTCTCCTTAACAACAGG+TGG | 0.583281 | 7.4:-10414292 | None:intergenic |
| AGTCTTCCTCCGTCGCAGGG+TGG | 0.583357 | 7.4:+10414616 | MS.gene065368:CDS |
| GATAATTGGGATAATGATGA+TGG | 0.583376 | 7.4:+10414379 | MS.gene065368:CDS |
| TCAATCAAGAGAATAAAGGC+TGG | 0.583483 | 7.4:+10416646 | MS.gene065368:CDS |
| GAGAGTCTTCCTCCGTCGCA+GGG | 0.585493 | 7.4:+10414613 | MS.gene065368:CDS |
| ATAATGATGATTGGGCTGGT+TGG | 0.587457 | 7.4:+10416805 | MS.gene065368:CDS |
| CATTGTAACGGATCGGACGA+AGG | 0.591479 | 7.4:-10414086 | None:intergenic |
| CGATCGCATTCAAGCGATCG+CGG | 0.597188 | 7.4:+10414249 | MS.gene065368:CDS |
| TCAGGTTCTGGCTGGACAGG+AGG | 0.603150 | 7.4:+10416888 | MS.gene065368:CDS |
| ACATACTTCCCACCCTGCGA+CGG | 0.603399 | 7.4:-10414625 | None:intergenic |
| TCCTTTCAGGTAAAGGACGG+TGG | 0.603434 | 7.4:+10416435 | MS.gene065368:intron |
| GTGGTGGTGGTGATATTAGG+AGG | 0.604239 | 7.4:+10414425 | MS.gene065368:CDS |
| TTCATGTGTCTCGAATGCTC+CGG | 0.604613 | 7.4:+10414034 | MS.gene065368:CDS |
| AGTAGCAGATTGAGCAACCA+TGG | 0.614562 | 7.4:-10414851 | None:intergenic |
| CGATCGCTTGAATGCGATCG+CGG | 0.616517 | 7.4:-10414246 | None:intergenic |
| ATTGGGACAACCAAGATACA+AGG | 0.625922 | 7.4:+10416748 | MS.gene065368:CDS |
| TACTAAAGAGATCACTGCCA+AGG | 0.625987 | 7.4:+10414870 | MS.gene065368:CDS |
| ATGAATCCATTGTAACGGAT+CGG | 0.627111 | 7.4:-10414093 | None:intergenic |
| GGACCATGAATCCATTGTAA+CGG | 0.633410 | 7.4:-10414098 | None:intergenic |
| AGAGATTGGACAAAGGACAT+GGG | 0.640988 | 7.4:+10416509 | MS.gene065368:CDS |
| GAAGGACAACCTTCATCAGG+TGG | 0.644075 | 7.4:+10416690 | MS.gene065368:CDS |
| GTCGATTTCGACCTCGACGA+CGG | 0.645252 | 7.4:-10414496 | None:intergenic |
| TTCGACGTAGCAGCCAGAGG+TGG | 0.648406 | 7.4:-10414340 | None:intergenic |
| GTTCCCAAAAGAATCCCCAA+TGG | 0.657239 | 7.4:+10413990 | MS.gene065368:CDS |
| GCATCATGGCGGCGACACGG+CGG | 0.663367 | 7.4:+10413921 | None:intergenic |
| TAAGAAACGGAGGCCCATTG+GGG | 0.663870 | 7.4:-10414004 | None:intergenic |
| GTCGAGGTCGAAATCGACTG+AGG | 0.665211 | 7.4:+10414501 | MS.gene065368:CDS |
| GTGGAGTTACACCGTCGTCG+AGG | 0.665528 | 7.4:+10414485 | MS.gene065368:CDS |
| CTGGCTGCTACGTCGAATGG+TGG | 0.665583 | 7.4:+10414346 | MS.gene065368:CDS |
| ACAGACAGATAATCATTCTG+AGG | 0.672182 | 7.4:-10414688 | None:intergenic |
| GGACAACCAAGATACAAGGA+AGG | 0.673526 | 7.4:+10416752 | MS.gene065368:CDS |
| GAGATTGGACAAAGGACATG+GGG | 0.675059 | 7.4:+10416510 | MS.gene065368:CDS |
| AGACATCAGAGATTGGACAA+AGG | 0.675530 | 7.4:+10416502 | MS.gene065368:CDS |
| AGTTATGGTTATGGATCGCG+TGG | 0.677987 | 7.4:+10414406 | MS.gene065368:CDS |
| GAAAACGCCGTAAGAAACGG+AGG | 0.679467 | 7.4:-10414014 | None:intergenic |
| GGACGGTGGTTATGATCACA+AGG | 0.683948 | 7.4:+10416449 | MS.gene065368:CDS |
| GACATGGGGTATAATGAAAG+GGG | 0.684113 | 7.4:+10416524 | MS.gene065368:CDS |
| CCATTCGACGTAGCAGCCAG+AGG | 0.687181 | 7.4:-10414343 | None:intergenic |
| ATCAAGAAAATGGAAGCAGG+CGG | 0.690027 | 7.4:+10414130 | MS.gene065368:CDS |
| TATGGTTATGGATCGCGTGG+TGG | 0.695048 | 7.4:+10414409 | MS.gene065368:CDS |
| GAATGCTCCGGCAAACACCG+TGG | 0.703523 | 7.4:+10414046 | MS.gene065368:CDS |
| CGAAGGAGATGTGAACGCCG+AGG | 0.708021 | 7.4:-10414069 | None:intergenic |
| CGACTGAGGATATTTACACG+AGG | 0.717863 | 7.4:+10414515 | MS.gene065368:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATTATACAAATTACCT+TGG | - | chr7.4:10414890-10414909 | None:intergenic | 15.0% |
| !!! | CACTTTTTATAGAAAAAAAT+AGG | - | chr7.4:10414934-10414953 | None:intergenic | 15.0% |
| !!! | TTGAATTTTATGTTTATGTT+CGG | + | chr7.4:10415558-10415577 | MS.gene065368:intron | 15.0% |
| !! | AAAATCAAGAAAAAACTTGA+AGG | - | chr7.4:10415407-10415426 | None:intergenic | 20.0% |
| !! | AAATCAAGAAAAAACTTGAA+GGG | - | chr7.4:10415406-10415425 | None:intergenic | 20.0% |
| !! | AACAATACAGAAATAATAGA+GGG | - | chr7.4:10415316-10415335 | None:intergenic | 20.0% |
| !! | TGCGTGAATAAATTATTTAA+TGG | + | chr7.4:10415363-10415382 | MS.gene065368:intron | 20.0% |
| !!! | ATAAATCTTTTGGTCATAAT+GGG | + | chr7.4:10416862-10416881 | MS.gene065368:CDS | 20.0% |
| !!! | CTATGTTTTGTTTGTTTTTA+GGG | + | chr7.4:10414814-10414833 | MS.gene065368:intron | 20.0% |
| !!! | GAATTTGATGATAAATCTTT+TGG | + | chr7.4:10416852-10416871 | MS.gene065368:CDS | 20.0% |
| !!! | TAAGAAAATTTAGAGCTTTT+AGG | + | chr7.4:10416295-10416314 | MS.gene065368:intron | 20.0% |
| !!! | TCTATGTTTTGTTTGTTTTT+AGG | + | chr7.4:10414813-10414832 | MS.gene065368:intron | 20.0% |
| ! | AAATTCATCATCATCATCTT+TGG | - | chr7.4:10416838-10416857 | None:intergenic | 25.0% |
| ! | AATCAAGAAAAAACTTGAAG+GGG | - | chr7.4:10415405-10415424 | None:intergenic | 25.0% |
| ! | GAACAATACAGAAATAATAG+AGG | - | chr7.4:10415317-10415336 | None:intergenic | 25.0% |
| ! | GATTTCAATCAAGAGAATAA+AGG | + | chr7.4:10416642-10416661 | MS.gene065368:CDS | 25.0% |
| ! | TACTGTCTCAGTTATATTTA+AGG | + | chr7.4:10415465-10415484 | MS.gene065368:intron | 25.0% |
| ! | TCCTCATAATAATGATGATT+GGG | + | chr7.4:10416797-10416816 | MS.gene065368:CDS | 25.0% |
| ! | TTCTGTATTGTTCAACTAAT+TGG | + | chr7.4:10415324-10415343 | MS.gene065368:intron | 25.0% |
| !! | GATAAATCTTTTGGTCATAA+TGG | + | chr7.4:10416861-10416880 | MS.gene065368:CDS | 25.0% |
| !! | TCATGTCTATCATTTTCATT+TGG | - | chr7.4:10416624-10416643 | None:intergenic | 25.0% |
| !! | TTGACTATATTTTTCCTTTC+AGG | + | chr7.4:10416422-10416441 | MS.gene065368:intron | 25.0% |
| !!! | ACAAATATATCCTTGCTTTT+CGG | - | chr7.4:10415774-10415793 | None:intergenic | 25.0% |
| !!! | ATATTTTTCCTTTCAGGTAA+AGG | + | chr7.4:10416428-10416447 | MS.gene065368:intron | 25.0% |
| !!! | CAAGTTTTTTCTTGATTTTG+AGG | + | chr7.4:10415408-10415427 | MS.gene065368:intron | 25.0% |
| !!! | CCATTTTCAAATCTAAAACA+CGG | - | chr7.4:10415908-10415927 | None:intergenic | 25.0% |
| !!! | CTGAAATCTTATTTTGTTGA+GGG | + | chr7.4:10416222-10416241 | MS.gene065368:intron | 25.0% |
| !!! | GTTTTGTTTTCGTGTTTTAT+GGG | + | chr7.4:10414761-10414780 | MS.gene065368:intron | 25.0% |
| !!! | TGTTTTGTTTTCGTGTTTTA+TGG | + | chr7.4:10414760-10414779 | MS.gene065368:intron | 25.0% |
| !!! | TTTGTTTGTTTTTAGGGAAT+TGG | + | chr7.4:10414820-10414839 | MS.gene065368:intron | 25.0% |
| ACATTAACAGCAAAAACATG+AGG | - | chr7.4:10415250-10415269 | None:intergenic | 30.0% | |
| ACCAATTCTCAAACTCTTTA+AGG | + | chr7.4:10415497-10415516 | MS.gene065368:intron | 30.0% | |
| ACCTTAAAGAGTTTGAGAAT+TGG | - | chr7.4:10415501-10415520 | None:intergenic | 30.0% | |
| AGCAGCATTTGAATTATACT+TGG | - | chr7.4:10414218-10414237 | None:intergenic | 30.0% | |
| ATAACTAAGATTTGACCGAA+TGG | + | chr7.4:10416072-10416091 | MS.gene065368:intron | 30.0% | |
| ATCAAGAAAAAACTTGAAGG+GGG | - | chr7.4:10415404-10415423 | None:intergenic | 30.0% | |
| ATCGTATTTCTCCATTCATA+TGG | + | chr7.4:10416352-10416371 | MS.gene065368:intron | 30.0% | |
| CCTCAACAAAATAAGATTTC+AGG | - | chr7.4:10416224-10416243 | None:intergenic | 30.0% | |
| CTCCTCATAATAATGATGAT+TGG | + | chr7.4:10416796-10416815 | MS.gene065368:CDS | 30.0% | |
| GATAATTGGGATAATGATGA+TGG | + | chr7.4:10414379-10414398 | MS.gene065368:CDS | 30.0% | |
| GCATTGAAATTCCATATGAA+TGG | - | chr7.4:10416366-10416385 | None:intergenic | 30.0% | |
| TAAGATTTCAGGAAGCTAAA+TGG | - | chr7.4:10416213-10416232 | None:intergenic | 30.0% | |
| TAGTTAAAACAAAGGGTAGA+AGG | - | chr7.4:10415748-10415767 | None:intergenic | 30.0% | |
| TATTAATGAGCTTCAGTTCA+GGG | - | chr7.4:10415138-10415157 | None:intergenic | 30.0% | |
| TCGGTCATAGTTAAAACAAA+GGG | - | chr7.4:10415755-10415774 | None:intergenic | 30.0% | |
| TGCGTTATTAATGAACTTCA+AGG | - | chr7.4:10415195-10415214 | None:intergenic | 30.0% | |
| TTATGTTAGCATCTTGAGAA+AGG | + | chr7.4:10415620-10415639 | MS.gene065368:intron | 30.0% | |
| TTATTAATGAGCTTCAGTTC+AGG | - | chr7.4:10415139-10415158 | None:intergenic | 30.0% | |
| TTCGGTCATAGTTAAAACAA+AGG | - | chr7.4:10415756-10415775 | None:intergenic | 30.0% | |
| ! | AAGTCTTTTGGCAATCTTAT+TGG | + | chr7.4:10415532-10415551 | MS.gene065368:intron | 30.0% |
| ! | AATTCTCAAACTCTTTAAGG+TGG | + | chr7.4:10415500-10415519 | MS.gene065368:intron | 30.0% |
| ! | GTATAATTCAAATGCTGCTT+CGG | + | chr7.4:10414219-10414238 | MS.gene065368:CDS | 30.0% |
| ! | TGTCTATCATTTTCATTTGG+TGG | - | chr7.4:10416621-10416640 | None:intergenic | 30.0% |
| ! | TTTTCGTGTTTTATGGGAAA+TGG | + | chr7.4:10414767-10414786 | MS.gene065368:intron | 30.0% |
| !! | AATGATGATGGTGATAGTTA+TGG | + | chr7.4:10414391-10414410 | MS.gene065368:CDS | 30.0% |
| !! | AATTTAGAGCTTTTAGGCAT+AGG | + | chr7.4:10416301-10416320 | MS.gene065368:intron | 30.0% |
| !! | CCGTGTTTTAGATTTGAAAA+TGG | + | chr7.4:10415905-10415924 | MS.gene065368:intron | 30.0% |
| !! | TTTCTTGATTTTGAGGATAG+AGG | + | chr7.4:10415415-10415434 | MS.gene065368:intron | 30.0% |
| !!! | CCTGAAATCTTATTTTGTTG+AGG | + | chr7.4:10416221-10416240 | MS.gene065368:intron | 30.0% |
| !!! | TGGATTTTTTGCAAGTCTTT+TGG | + | chr7.4:10415520-10415539 | MS.gene065368:intron | 30.0% |
| !!! | TGTTTTTGCTGTTAATGTTG+AGG | + | chr7.4:10415252-10415271 | MS.gene065368:intron | 30.0% |
| AACACGTTCCTTTCTCAATA+CGG | + | chr7.4:10414166-10414185 | MS.gene065368:CDS | 35.0% | |
| AACCAAACTCAAGATTACCA+GGG | - | chr7.4:10415043-10415062 | None:intergenic | 35.0% | |
| ACAGACAGATAATCATTCTG+AGG | - | chr7.4:10414691-10414710 | None:intergenic | 35.0% | |
| AGATTTGACCGAATGGAAAT+TGG | + | chr7.4:10416079-10416098 | MS.gene065368:intron | 35.0% | |
| AGTTATCAGAATTCCCATTC+GGG | - | chr7.4:10416596-10416615 | None:intergenic | 35.0% | |
| ATACCTATCACTCAAACTCT+TGG | + | chr7.4:10416721-10416740 | MS.gene065368:CDS | 35.0% | |
| CAGTTATCAGAATTCCCATT+CGG | - | chr7.4:10416597-10416616 | None:intergenic | 35.0% | |
| CATAATAATGATGATTGGGC+TGG | + | chr7.4:10416801-10416820 | MS.gene065368:CDS | 35.0% | |
| GATGGTGATAGTTATGGTTA+TGG | + | chr7.4:10414397-10414416 | MS.gene065368:CDS | 35.0% | |
| GCCCAATCATCATTATTATG+AGG | - | chr7.4:10416801-10416820 | None:intergenic | 35.0% | |
| GGTAATTAGATGTACGTTGT+TGG | + | chr7.4:10416160-10416179 | MS.gene065368:intron | 35.0% | |
| GGTGATGTAATTGGATTTGT+TGG | + | chr7.4:10414460-10414479 | MS.gene065368:CDS | 35.0% | |
| TAATCTTGAGTTTGGTTGGT+AGG | + | chr7.4:10415046-10415065 | MS.gene065368:intron | 35.0% | |
| TACCTATCACTCAAACTCTT+GGG | + | chr7.4:10416722-10416741 | MS.gene065368:CDS | 35.0% | |
| TACCTGAGTTCAATCTCTAA+CGG | - | chr7.4:10415100-10415119 | None:intergenic | 35.0% | |
| TAGAGATTCCGTATTGAGAA+AGG | - | chr7.4:10414177-10414196 | None:intergenic | 35.0% | |
| TATTTACACGAGGACACAAT+TGG | + | chr7.4:10414525-10414544 | MS.gene065368:CDS | 35.0% | |
| TCAATCAAGAGAATAAAGGC+TGG | + | chr7.4:10416646-10416665 | MS.gene065368:CDS | 35.0% | |
| TCACTTCTCACACTATCATT+CGG | + | chr7.4:10416248-10416267 | MS.gene065368:intron | 35.0% | |
| TTAACTATGACCGAAAAGCA+AGG | + | chr7.4:10415761-10415780 | MS.gene065368:intron | 35.0% | |
| TTCTCAATACGGAATCTCTA+AGG | + | chr7.4:10414177-10414196 | MS.gene065368:CDS | 35.0% | |
| ! | AGCTTTTAGGCATAGGAATT+GGG | + | chr7.4:10416308-10416327 | MS.gene065368:intron | 35.0% |
| ! | CATTTTCTTGATCTGGAGAT+CGG | - | chr7.4:10414122-10414141 | None:intergenic | 35.0% |
| !! | ATGAATCCATTGTAACGGAT+CGG | - | chr7.4:10414096-10414115 | None:intergenic | 35.0% |
| !! | GTAATTGGATTTGTTGGAAG+TGG | + | chr7.4:10414466-10414485 | MS.gene065368:CDS | 35.0% |
| !! | TGGGTGTTAGATTTGCTAAA+TGG | + | chr7.4:10416139-10416158 | MS.gene065368:intron | 35.0% |
| !! | TGTTGATTTGTCTGCTAATC+TGG | + | chr7.4:10415935-10415954 | MS.gene065368:intron | 35.0% |
| !! | TTATCTGTCTGTTGTTTCTG+AGG | + | chr7.4:10414699-10414718 | MS.gene065368:intron | 35.0% |
| !! | TTTTCCTTTCAGGTAAAGGA+CGG | + | chr7.4:10416432-10416451 | MS.gene065368:intron | 35.0% |
| !!! | AGATTTTTTCGCGAAGAAGA+TGG | + | chr7.4:10414570-10414589 | MS.gene065368:CDS | 35.0% |
| !!! | GCGTTATTTTTGTTCAGAGA+TGG | + | chr7.4:10416270-10416289 | MS.gene065368:intron | 35.0% |
| AAAAACATGAGGAACCGATC+GGG | - | chr7.4:10415239-10415258 | None:intergenic | 40.0% | |
| AAAGGAACGTGTTGAGATTG+CGG | - | chr7.4:10414159-10414178 | None:intergenic | 40.0% | |
| AAGCTGCTCAACAGTAAAGA+TGG | - | chr7.4:10415828-10415847 | None:intergenic | 40.0% | |
| ACTCAAACTCTTGGGATGAT+TGG | + | chr7.4:10416730-10416749 | MS.gene065368:CDS | 40.0% | |
| ACTCAGAAGACATCAGAGAT+TGG | + | chr7.4:10416495-10416514 | MS.gene065368:CDS | 40.0% | |
| AGACATCAGAGATTGGACAA+AGG | + | chr7.4:10416502-10416521 | MS.gene065368:CDS | 40.0% | |
| AGAGATTGGACAAAGGACAT+GGG | + | chr7.4:10416509-10416528 | MS.gene065368:CDS | 40.0% | |
| AGGACATGGGGTATAATGAA+AGG | + | chr7.4:10416522-10416541 | MS.gene065368:CDS | 40.0% | |
| ATCAAGAAAATGGAAGCAGG+CGG | + | chr7.4:10414130-10414149 | MS.gene065368:CDS | 40.0% | |
| ATCCCAAGAGTTTGAGTGAT+AGG | - | chr7.4:10416727-10416746 | None:intergenic | 40.0% | |
| ATTAGGAGGAATCAGAGTAC+TGG | + | chr7.4:10414439-10414458 | MS.gene065368:CDS | 40.0% | |
| ATTCCCATTCGGGTAATCTT+TGG | - | chr7.4:10416586-10416605 | None:intergenic | 40.0% | |
| ATTGGGACAACCAAGATACA+AGG | + | chr7.4:10416748-10416767 | MS.gene065368:CDS | 40.0% | |
| CAAAAACATGAGGAACCGAT+CGG | - | chr7.4:10415240-10415259 | None:intergenic | 40.0% | |
| CAACCAAACTCAAGATTACC+AGG | - | chr7.4:10415044-10415063 | None:intergenic | 40.0% | |
| CAGATCAAGAAAATGGAAGC+AGG | + | chr7.4:10414127-10414146 | MS.gene065368:CDS | 40.0% | |
| CATAATTAGAGCCTTGCTTG+AGG | + | chr7.4:10416024-10416043 | MS.gene065368:intron | 40.0% | |
| CATGAAAACGCCGTAAGAAA+CGG | - | chr7.4:10414020-10414039 | None:intergenic | 40.0% | |
| CCTTAGGTCCAATTTCCATT+CGG | - | chr7.4:10416090-10416109 | None:intergenic | 40.0% | |
| CGAATGGGAATTCTGATAAC+TGG | + | chr7.4:10416595-10416614 | MS.gene065368:CDS | 40.0% | |
| CGATCTCCAGATCAAGAAAA+TGG | + | chr7.4:10414120-10414139 | MS.gene065368:CDS | 40.0% | |
| CTAGCATTCTCCTTAACAAC+AGG | - | chr7.4:10414298-10414317 | None:intergenic | 40.0% | |
| CTCAAACTCTTGGGATGATT+GGG | + | chr7.4:10416731-10416750 | MS.gene065368:CDS | 40.0% | |
| CTGGTAATCTTGAGTTTGGT+TGG | + | chr7.4:10415042-10415061 | MS.gene065368:intron | 40.0% | |
| GACATGGGGTATAATGAAAG+GGG | + | chr7.4:10416524-10416543 | MS.gene065368:CDS | 40.0% | |
| GCATTCCACATACATTCCTT+AGG | - | chr7.4:10416106-10416125 | None:intergenic | 40.0% | |
| GGACATGGGGTATAATGAAA+GGG | + | chr7.4:10416523-10416542 | MS.gene065368:CDS | 40.0% | |
| GGACCATGAATCCATTGTAA+CGG | - | chr7.4:10414101-10414120 | None:intergenic | 40.0% | |
| GGGAATTGGTAAATTGTCCA+TGG | + | chr7.4:10414834-10414853 | MS.gene065368:intron | 40.0% | |
| GTACTTCCTTCCTTGTATCT+TGG | - | chr7.4:10416761-10416780 | None:intergenic | 40.0% | |
| TACTAAAGAGATCACTGCCA+AGG | + | chr7.4:10414870-10414889 | MS.gene065368:CDS | 40.0% | |
| TAGAGGACAATGAGGAACAA+AGG | + | chr7.4:10415432-10415451 | MS.gene065368:intron | 40.0% | |
| TCACCAAAGATTACCCGAAT+GGG | + | chr7.4:10416580-10416599 | MS.gene065368:CDS | 40.0% | |
| TCTTCTACTTCTACCAGAGA+AGG | + | chr7.4:10416672-10416691 | MS.gene065368:CDS | 40.0% | |
| TGCTAATCTGGTCAATAGCT+GGG | + | chr7.4:10415947-10415966 | MS.gene065368:intron | 40.0% | |
| TGCTCAACAGTAAAGATGGT+GGG | - | chr7.4:10415824-10415843 | None:intergenic | 40.0% | |
| TGGTGGTTGGGATGATAATT+GGG | + | chr7.4:10414366-10414385 | MS.gene065368:CDS | 40.0% | |
| TTCACCAAAGATTACCCGAA+TGG | + | chr7.4:10416579-10416598 | MS.gene065368:CDS | 40.0% | |
| TTCCCAAAAGAATCCCCAAT+GGG | + | chr7.4:10413991-10414010 | MS.gene065368:CDS | 40.0% | |
| TTCCGTTAGAGATTGAACTC+AGG | + | chr7.4:10415095-10415114 | MS.gene065368:intron | 40.0% | |
| TTGGACCTAAGGAATGTATG+TGG | + | chr7.4:10416098-10416117 | MS.gene065368:intron | 40.0% | |
| TTGGATTTGGATCTAGTCCT+GGG | + | chr7.4:10414647-10414666 | MS.gene065368:CDS | 40.0% | |
| TTTCAGGAAGCTAAATGGCA+AGG | - | chr7.4:10416208-10416227 | None:intergenic | 40.0% | |
| TTTGAGGATAGAGGACAATG+AGG | + | chr7.4:10415424-10415443 | MS.gene065368:intron | 40.0% | |
| ! | CTCAAGCAAGGCTCTAATTA+TGG | - | chr7.4:10416026-10416045 | None:intergenic | 40.0% |
| ! | CTGCTTCCATTTTCTTGATC+TGG | - | chr7.4:10414129-10414148 | None:intergenic | 40.0% |
| ! | GAGCTTTTAGGCATAGGAAT+TGG | + | chr7.4:10416307-10416326 | MS.gene065368:intron | 40.0% |
| ! | GATCCGTTACAATGGATTCA+TGG | + | chr7.4:10414095-10414114 | MS.gene065368:CDS | 40.0% |
| ! | GCAGATCTTGTTTGAAGGTT+CGG | - | chr7.4:10413963-10413982 | None:intergenic | 40.0% |
| ! | TCTTGTTTGAAGGTTCGGAT+TGG | - | chr7.4:10413958-10413977 | None:intergenic | 40.0% |
| !! | ATAATGATGATTGGGCTGGT+TGG | + | chr7.4:10416805-10416824 | MS.gene065368:CDS | 40.0% |
| !! | CAGAGTACTGGTGATGTAAT+TGG | + | chr7.4:10414451-10414470 | MS.gene065368:CDS | 40.0% |
| !! | GTAAAGATGGTGGGAATTTG+TGG | - | chr7.4:10415815-10415834 | None:intergenic | 40.0% |
| !! | TAATGATGATTGGGCTGGTT+GGG | + | chr7.4:10416806-10416825 | MS.gene065368:CDS | 40.0% |
| !!! | TTTTTTCGCGAAGAAGATGG+CGG | + | chr7.4:10414573-10414592 | MS.gene065368:CDS | 40.0% |
| AAAGGGTAGAAGGTGACAAC+TGG | - | chr7.4:10415738-10415757 | None:intergenic | 45.0% | |
| AGAGAAGGACAACCTTCATC+AGG | + | chr7.4:10416687-10416706 | MS.gene065368:CDS | 45.0% | |
| AGTAGCAGATTGAGCAACCA+TGG | - | chr7.4:10414854-10414873 | None:intergenic | 45.0% | |
| AGTTATGGTTATGGATCGCG+TGG | + | chr7.4:10414406-10414425 | MS.gene065368:CDS | 45.0% | |
| CAGAGATTGGACAAAGGACA+TGG | + | chr7.4:10416508-10416527 | MS.gene065368:CDS | 45.0% | |
| CCGAATGGAAATTGGACCTA+AGG | + | chr7.4:10416087-10416106 | MS.gene065368:intron | 45.0% | |
| CGACTGAGGATATTTACACG+AGG | + | chr7.4:10414515-10414534 | MS.gene065368:CDS | 45.0% | |
| CGCAAGAGCAACACATGTTT+CGG | + | chr7.4:10415211-10415230 | MS.gene065368:intron | 45.0% | |
| CTGCTAATCTGGTCAATAGC+TGG | + | chr7.4:10415946-10415965 | MS.gene065368:intron | 45.0% | |
| CTGCTCAACAGTAAAGATGG+TGG | - | chr7.4:10415825-10415844 | None:intergenic | 45.0% | |
| GAATGCTCAGGTCTGTGATT+GGG | + | chr7.4:10416120-10416139 | MS.gene065368:intron | 45.0% | |
| GAGATTGGACAAAGGACATG+GGG | + | chr7.4:10416510-10416529 | MS.gene065368:CDS | 45.0% | |
| GCATTCTCCTTAACAACAGG+TGG | - | chr7.4:10414295-10414314 | None:intergenic | 45.0% | |
| GGAATGTATGTGGAATGCTC+AGG | + | chr7.4:10416108-10416127 | MS.gene065368:intron | 45.0% | |
| GGACAACCAAGATACAAGGA+AGG | + | chr7.4:10416752-10416771 | MS.gene065368:CDS | 45.0% | |
| GGGTATAATGAAAGGGGTCA+TGG | + | chr7.4:10416530-10416549 | MS.gene065368:CDS | 45.0% | |
| GTAGAAGGTGACAACTGGAA+AGG | - | chr7.4:10415733-10415752 | None:intergenic | 45.0% | |
| GTGGTGGTTGGGATGATAAT+TGG | + | chr7.4:10414365-10414384 | MS.gene065368:CDS | 45.0% | |
| GTTCCCAAAAGAATCCCCAA+TGG | + | chr7.4:10413990-10414009 | MS.gene065368:CDS | 45.0% | |
| GTTGGATTTGGATCTAGTCC+TGG | + | chr7.4:10414646-10414665 | MS.gene065368:CDS | 45.0% | |
| TCAGTTTGTCCACCTGATGA+AGG | - | chr7.4:10416702-10416721 | None:intergenic | 45.0% | |
| TGAACTCAGGTAATCCCGAT+CGG | + | chr7.4:10415108-10415127 | MS.gene065368:intron | 45.0% | |
| TGAGGAGAAATCCTTTGAGC+AGG | - | chr7.4:10414673-10414692 | None:intergenic | 45.0% | |
| TGATGAAGGTTGTCCTTCTC+TGG | - | chr7.4:10416688-10416707 | None:intergenic | 45.0% | |
| TTACACGAGGACACAATTGG+AGG | + | chr7.4:10414528-10414547 | MS.gene065368:CDS | 45.0% | |
| TTCATGTGTCTCGAATGCTC+CGG | + | chr7.4:10414034-10414053 | MS.gene065368:CDS | 45.0% | |
| ! | AACTTTCAGAAGCATGCTGC+AGG | - | chr7.4:10415647-10415666 | None:intergenic | 45.0% |
| ! | AAGGTTCGGATTGGAGTTCA+CGG | - | chr7.4:10413949-10413968 | None:intergenic | 45.0% |
| ! | GAACTCCTCAACCTTTTGAG+AGG | - | chr7.4:10416562-10416581 | None:intergenic | 45.0% |
| ! | GGTGGGAAGTATGTTGGATT+TGG | + | chr7.4:10414634-10414653 | MS.gene065368:CDS | 45.0% |
| ! | TCGACGCAGATCTTGTTTGA+AGG | - | chr7.4:10413968-10413987 | None:intergenic | 45.0% |
| ! | TCTGGTCAATAGCTGGGTTT+TGG | + | chr7.4:10415953-10415972 | MS.gene065368:intron | 45.0% |
| ! | TTTGGTCATAATGGGACGTC+AGG | + | chr7.4:10416870-10416889 | MS.gene065368:CDS | 45.0% |
| !! | AGGAAGGAAGTACCAGCTAA+AGG | + | chr7.4:10416768-10416787 | MS.gene065368:CDS | 45.0% |
| AATGAAAGGGGTCATGGCGT+TGG | + | chr7.4:10416536-10416555 | MS.gene065368:CDS | 50.0% | |
| ACCACCGTCCTTTACCTGAA+AGG | - | chr7.4:10416439-10416458 | None:intergenic | 50.0% | |
| AGCCTTGCTTGAGGTGAACT+AGG | + | chr7.4:10416033-10416052 | MS.gene065368:intron | 50.0% | |
| CAATGGGCCTCCGTTTCTTA+CGG | + | chr7.4:10414007-10414026 | MS.gene065368:CDS | 50.0% | |
| CACATGTTTCGGATCCCGAT+CGG | + | chr7.4:10415222-10415241 | MS.gene065368:intron | 50.0% | |
| CAGGAAGCTAAATGGCAAGG+CGG | - | chr7.4:10416205-10416224 | None:intergenic | 50.0% | |
| CTTCGTCCGATCCGTTACAA+TGG | + | chr7.4:10414087-10414106 | MS.gene065368:CDS | 50.0% | |
| GAAAACGCCGTAAGAAACGG+AGG | - | chr7.4:10414017-10414036 | None:intergenic | 50.0% | |
| GAAGGACAACCTTCATCAGG+TGG | + | chr7.4:10416690-10416709 | MS.gene065368:CDS | 50.0% | |
| GAGAATGCTAGTACTCGTGC+TGG | + | chr7.4:10414307-10414326 | MS.gene065368:CDS | 50.0% | |
| GCCTTGCTTGAGGTGAACTA+GGG | + | chr7.4:10416034-10416053 | MS.gene065368:intron | 50.0% | |
| GCGTGATCCACCTGTTGTTA+AGG | + | chr7.4:10414285-10414304 | MS.gene065368:CDS | 50.0% | |
| GCTAGTACTCGTGCTGGAAA+AGG | + | chr7.4:10414313-10414332 | MS.gene065368:CDS | 50.0% | |
| GGAATGCTCAGGTCTGTGAT+TGG | + | chr7.4:10416119-10416138 | MS.gene065368:intron | 50.0% | |
| GGACGGTGGTTATGATCACA+AGG | + | chr7.4:10416449-10416468 | MS.gene065368:CDS | 50.0% | |
| GGCCCTGGTAATCTTGAGTT+TGG | + | chr7.4:10415038-10415057 | MS.gene065368:intron | 50.0% | |
| GTAAGAAACGGAGGCCCATT+GGG | - | chr7.4:10414008-10414027 | None:intergenic | 50.0% | |
| TAAGAAACGGAGGCCCATTG+GGG | - | chr7.4:10414007-10414026 | None:intergenic | 50.0% | |
| TATGGTTATGGATCGCGTGG+TGG | + | chr7.4:10414409-10414428 | MS.gene065368:CDS | 50.0% | |
| TCAGTTCAGGGCAAACCGAT+CGG | - | chr7.4:10415126-10415145 | None:intergenic | 50.0% | |
| TCCCTAGTTCACCTCAAGCA+AGG | - | chr7.4:10416038-10416057 | None:intergenic | 50.0% | |
| TGAGGAGCTGATCCTTTAGC+TGG | - | chr7.4:10416783-10416802 | None:intergenic | 50.0% | |
| TGGAAAAGGAAAGCCACCTC+TGG | + | chr7.4:10414327-10414346 | MS.gene065368:CDS | 50.0% | |
| ! | AGGCCCATTGGGGATTCTTT+TGG | - | chr7.4:10413997-10414016 | None:intergenic | 50.0% |
| ! | CATAATGGGACGTCAGGTTC+TGG | + | chr7.4:10416876-10416895 | MS.gene065368:CDS | 50.0% |
| ! | CGCGAGAGCAACACATGTTT+TGG | + | chr7.4:10415159-10415178 | MS.gene065368:intron | 50.0% |
| ! | GGCCCATTGGGGATTCTTTT+GGG | - | chr7.4:10413996-10414015 | None:intergenic | 50.0% |
| ! | GTTGGCCTCTCAAAAGGTTG+AGG | + | chr7.4:10416554-10416573 | MS.gene065368:CDS | 50.0% |
| ! | TCCTTTCAGGTAAAGGACGG+TGG | + | chr7.4:10416435-10416454 | MS.gene065368:intron | 50.0% |
| !! | CATTGTAACGGATCGGACGA+AGG | - | chr7.4:10414089-10414108 | None:intergenic | 50.0% |
| !! | GTGGTGGTGGTGATATTAGG+AGG | + | chr7.4:10414425-10414444 | MS.gene065368:CDS | 50.0% |
| !! | TACGTCGAATGGTGGTGGTT+GGG | + | chr7.4:10414354-10414373 | MS.gene065368:CDS | 50.0% |
| ACATACTTCCCACCCTGCGA+CGG | - | chr7.4:10414628-10414647 | None:intergenic | 55.0% | |
| CAGTTCAGGGCAAACCGATC+GGG | - | chr7.4:10415125-10415144 | None:intergenic | 55.0% | |
| CGATCGCATTCAAGCGATCG+CGG | + | chr7.4:10414249-10414268 | MS.gene065368:CDS | 55.0% | |
| CGATCGCTTGAATGCGATCG+CGG | - | chr7.4:10414249-10414268 | None:intergenic | 55.0% | |
| CGTAAGAAACGGAGGCCCAT+TGG | - | chr7.4:10414009-10414028 | None:intergenic | 55.0% | |
| GAAATCCTTTGAGCAGGCCC+AGG | - | chr7.4:10414667-10414686 | None:intergenic | 55.0% | |
| GGAGGCTTCTGCTGCGAATA+AGG | + | chr7.4:10414546-10414565 | MS.gene065368:CDS | 55.0% | |
| GGCGGAGAATGAATCGAGAC+CGG | + | chr7.4:10414591-10414610 | MS.gene065368:CDS | 55.0% | |
| GTCGAGGTCGAAATCGACTG+AGG | + | chr7.4:10414501-10414520 | MS.gene065368:CDS | 55.0% | |
| ! | GTCGATTTCGACCTCGACGA+CGG | - | chr7.4:10414499-10414518 | None:intergenic | 55.0% |
| ! | TCGCAGGGTGGGAAGTATGT+TGG | + | chr7.4:10414628-10414647 | MS.gene065368:CDS | 55.0% |
| !! | CATGGCGTTGGCCTCTCAAA+AGG | + | chr7.4:10416548-10416567 | MS.gene065368:CDS | 55.0% |
| !! | CGCGTGGTGGTGGTGATATT+AGG | + | chr7.4:10414422-10414441 | MS.gene065368:CDS | 55.0% |
| !! | CTACGTCGAATGGTGGTGGT+TGG | + | chr7.4:10414353-10414372 | MS.gene065368:CDS | 55.0% |
| AGATGTGAACGCCGAGGCCA+CGG | - | chr7.4:10414066-10414085 | None:intergenic | 60.0% | |
| ATGCCTGCTGCTGCTGCTGT+TGG | + | chr7.4:10415983-10416002 | MS.gene065368:intron | 60.0% | |
| CCATTCGACGTAGCAGCCAG+AGG | - | chr7.4:10414346-10414365 | None:intergenic | 60.0% | |
| CCTCTGGCTGCTACGTCGAA+TGG | + | chr7.4:10414343-10414362 | MS.gene065368:CDS | 60.0% | |
| CGAAGGAGATGTGAACGCCG+AGG | - | chr7.4:10414072-10414091 | None:intergenic | 60.0% | |
| CGCATTCAAGCGATCGCGGA+AGG | + | chr7.4:10414253-10414272 | MS.gene065368:CDS | 60.0% | |
| CTAGTCCTGGGCCTGCTCAA+AGG | + | chr7.4:10414659-10414678 | MS.gene065368:CDS | 60.0% | |
| CTGGCTGCTACGTCGAATGG+TGG | + | chr7.4:10414346-10414365 | MS.gene065368:CDS | 60.0% | |
| GAACCAACAGCAGCAGCAGC+AGG | - | chr7.4:10415989-10416008 | None:intergenic | 60.0% | |
| GAATGCTCCGGCAAACACCG+TGG | + | chr7.4:10414046-10414065 | MS.gene065368:CDS | 60.0% | |
| GAGAGTCTTCCTCCGTCGCA+GGG | + | chr7.4:10414613-10414632 | MS.gene065368:CDS | 60.0% | |
| GCTGCTACGTCGAATGGTGG+TGG | + | chr7.4:10414349-10414368 | MS.gene065368:CDS | 60.0% | |
| GGTTATGGATCGCGTGGTGG+TGG | + | chr7.4:10414412-10414431 | MS.gene065368:CDS | 60.0% | |
| GTATACCCCCTCCAGACCCT+GGG | + | chr7.4:10415010-10415029 | MS.gene065368:intron | 60.0% | |
| GTGGAGTTACACCGTCGTCG+AGG | + | chr7.4:10414485-10414504 | MS.gene065368:CDS | 60.0% | |
| TATACCCCCTCCAGACCCTG+GGG | + | chr7.4:10415011-10415030 | MS.gene065368:intron | 60.0% | |
| TGCGACGGAGGAAGACTCTC+CGG | - | chr7.4:10414613-10414632 | None:intergenic | 60.0% | |
| TGTATACCCCCTCCAGACCC+TGG | + | chr7.4:10415009-10415028 | MS.gene065368:intron | 60.0% | |
| TTCGACGTAGCAGCCAGAGG+TGG | - | chr7.4:10414343-10414362 | None:intergenic | 60.0% | |
| ! | ACGTCAGGTTCTGGCTGGAC+AGG | + | chr7.4:10416885-10416904 | MS.gene065368:CDS | 60.0% |
| ! | ATGGGACGTCAGGTTCTGGC+TGG | + | chr7.4:10416880-10416899 | MS.gene065368:CDS | 60.0% |
| ! | TCAGGTTCTGGCTGGACAGG+AGG | + | chr7.4:10416888-10416907 | MS.gene065368:CDS | 60.0% |
| AGTCTTCCTCCGTCGCAGGG+TGG | + | chr7.4:10414616-10414635 | MS.gene065368:CDS | 65.0% | |
| ATTACCAGGGCCCCTTCCCC+AGG | - | chr7.4:10415030-10415049 | None:intergenic | 65.0% | |
| CGATCGCGGAAGGTCGTTCG+TGG | + | chr7.4:10414263-10414282 | MS.gene065368:CDS | 65.0% | |
| GGAGAGTCTTCCTCCGTCGC+AGG | + | chr7.4:10414612-10414631 | MS.gene065368:CDS | 65.0% | |
| GTCTTCCTCCGTCGCAGGGT+GGG | + | chr7.4:10414617-10414636 | MS.gene065368:CDS | 65.0% | |
| TACTTCCCACCCTGCGACGG+AGG | - | chr7.4:10414625-10414644 | None:intergenic | 65.0% | |
| TCCGGCAAACACCGTGGCCT+CGG | + | chr7.4:10414052-10414071 | MS.gene065368:CDS | 65.0% | |
| TTACCAGGGCCCCTTCCCCA+GGG | - | chr7.4:10415029-10415048 | None:intergenic | 65.0% | |
| ! | GGTTCTGGCTGGACAGGAGG+AGG | + | chr7.4:10416891-10416910 | MS.gene065368:CDS | 65.0% |
| CCCCTCCAGACCCTGGGGAA+GGG | + | chr7.4:10415016-10415035 | MS.gene065368:intron | 70.0% | |
| CCCCTTCCCCAGGGTCTGGA+GGG | - | chr7.4:10415020-10415039 | None:intergenic | 70.0% | |
| CCCTCCAGACCCTGGGGAAG+GGG | + | chr7.4:10415017-10415036 | MS.gene065368:intron | 70.0% | |
| CCCTTCCCCAGGGTCTGGAG+GGG | - | chr7.4:10415019-10415038 | None:intergenic | 70.0% | |
| CCTTCCCCAGGGTCTGGAGG+GGG | - | chr7.4:10415018-10415037 | None:intergenic | 70.0% | |
| GCCGAGGCCACGGTGTTTGC+CGG | - | chr7.4:10414056-10414075 | None:intergenic | 70.0% | |
| AGACCCTGGGGAAGGGGCCC+TGG | + | chr7.4:10415023-10415042 | MS.gene065368:intron | 75.0% | |
| AGGGCCCCTTCCCCAGGGTC+TGG | - | chr7.4:10415024-10415043 | None:intergenic | 75.0% | |
| CCCCCTCCAGACCCTGGGGA+AGG | + | chr7.4:10415015-10415034 | MS.gene065368:intron | 75.0% | |
| GCCCCTTCCCCAGGGTCTGG+AGG | - | chr7.4:10415021-10415040 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 10413926 | 10416923 | 10413926 | ID=MS.gene065368 |
| chr7.4 | mRNA | 10413926 | 10416923 | 10413926 | ID=MS.gene065368.t1;Parent=MS.gene065368 |
| chr7.4 | exon | 10413926 | 10414708 | 10413926 | ID=MS.gene065368.t1.exon1;Parent=MS.gene065368.t1 |
| chr7.4 | CDS | 10413926 | 10414708 | 10413926 | ID=cds.MS.gene065368.t1;Parent=MS.gene065368.t1 |
| chr7.4 | exon | 10414835 | 10414891 | 10414835 | ID=MS.gene065368.t1.exon2;Parent=MS.gene065368.t1 |
| chr7.4 | CDS | 10414835 | 10414891 | 10414835 | ID=cds.MS.gene065368.t1;Parent=MS.gene065368.t1 |
| chr7.4 | exon | 10416444 | 10416923 | 10416444 | ID=MS.gene065368.t1.exon3;Parent=MS.gene065368.t1 |
| chr7.4 | CDS | 10416444 | 10416923 | 10416444 | ID=cds.MS.gene065368.t1;Parent=MS.gene065368.t1 |
| Gene Sequence |
| Protein sequence |
